BDGP Sequence Production Resources |
Search the DGRC for LD27659
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 276 |
Well: | 59 |
Vector: | pOT2 |
Associated Gene/Transcript | TRAM-RA |
Protein status: | LD27659.pep: gold |
Preliminary Size: | 2141 |
Sequenced Size: | 2123 |
Gene | Date | Evidence |
---|---|---|
CG11642 | 2001-01-01 | Release 2 assignment |
CG11642 | 2001-11-09 | Blastp of sequenced clone |
CG11642 | 2003-01-01 | Sim4 clustering to Release 3 |
TRAM | 2008-04-29 | Release 5.5 accounting |
TRAM | 2008-08-15 | Release 5.9 accounting |
TRAM | 2008-12-18 | 5.12 accounting |
2123 bp (2123 high quality bases) assembled on 2001-11-09
GenBank Submission: AY075393
> LD27659.complete CAGAGAGAGTGCGTGGCACTTTAGCCAGGGCTGGGCAAACCACAAATTGG AACCAGCGAAAAATACCTTCGAAATTTGCAAGCTGAGTGTGACAAGAATA AATAGTTCGGCCAACAAATCGGCTTCACAGTGAAAAGTGCAAGCAAACAA AAAGTGAGAAGTGCGCGATGTGCCATCCCTGGTGTAAACACGCACACACA CACACACACACGCGCAGGCGGCACACAGGTGAGCACCAGTAGCGCAGTCG ACAGCAGCAGCGGCGCAGGCAGCGGCAGAGGCAGAGCGCCCAGAGCAGAT ACTTCAGTTTGCGTCGATTGTGCCGATTGAGATTCAGATTCAGTTCCAGA TCACAACCCGAATCGGAGCCGCCAGTGTGTGCCAGACGCAACGCAACGGA ACGGAACGCAAGGCAACGTCTACGTCAGCAAAATCACGCTGCAAGTCACC AGTTGGCCGGAAGATTGGCGAAAATCCTGTGAGTAAAAATGGCAAGCGTG CAACAACAGTTTTGCCAGCGTGTCGCTTGGAGTCTCCCAGTGTGCGTGCG TGTGTGTGAGTGAGTGGGAGCGCGCAGCCGTGTGCGTGCGTGTGTGTGCG AGCGTCGAAACCCCTGAACCAGAGCAATGGCCATTAAACCGGGACTCGGT CGCAAGACCAGCAACAAGAACCCGCCTATCCTGAGCCACGAGTTTGTGAT CCAGAACCACGCGGACATCATCTCCTGCGTAGCCATGGTCTTCGTGGTCG GCCTGATGAACGAGTCGACGGCGGCGTTCGCCAGCGCGTTCATATCCCTG CACCACAACGTCAGCGGTGAGGACCCCAGCCGGGAGCAGCCATATGGCAA GCCATACACCTACATCGCCGGCATCAAGGATTACTGCGCGATATTCTTCT ACACGCTGACCTGCATAATCATGCACGCGATCATCCAGGAGTTCGTGCTG GACAAGATCAGCAAAAAACTACACCTGTCCAAGTTCAAGCTGGCCCGCTT CAACGAGTCCGGCCAACTGGTGGCCTTCTACCTGCTCTCCTTCGTCTGGG GCGCCCACGTGCTGCTGAAGGAGGGCTACCTCGGACAGGTGGCCCAGCTG TGGGAGGGCTTCCCCGACCATCCCATGAGCTTTCTGCACAAGTTCTACTT TGTGGTGCAGCTGGCCTACTACCTACACATGCTGCCGGAGCTCTACTTCC AGAAGATCAAGACCAAGGAGGAGCAGCAGCCCAAGATCGTGCACTCGATC AGCGGCTTCACCCTGATCGTCCTGGCCTACACGCTTAGCTTCCAGCGCCT GGCCCTCGTGCTGCTCACGCTGCACTACTTCAGCGAGCTGCTGTCGCACG TCTTCCAGCTGATCGGCGTGTTCGACCGCGAGGAGCGACTGGCCAAGCTG CGGGTGGTGAACAATGCCGTCTTTTTCCTGATCCGCTTCGCTACGTCCGT GATCGGTGTGCTCACGCTGTACTACGGCATCGGGGGTGTGCGATCCCTGC TGGCCTTGGGCGGCCTGATCGCCCTGCAGGGCTACCTGGTCTTCTCCTTC ATCACGGAGCAGCTGCGCGCCAAGCGCGAGGCCAAGAAGGAGGCCAAGCG GGAGGCCAAGCTGGCGCTGCAGACCAAAAAGCCAGCCAAGACGCCCAAGG ACAAGGTGAAGCGCAAGAAGGAGAGCGACCTGCCTGAGGCGGACCAGACC TCGCCCAGTCCCATCAAGCAGAAGCTCAAGTGAGAGCCGTCCCGGCCGAG CAGAGCAACAAAATCTTCCGCACACTTCCAATTCAAAACGAATGAGAGAT AGAGAGAGCAGCACCATGGACAGGAGCCCAGGTTGGATTGGTGGACACTT GCCACTGACCACTGAACACTGGCTACTTGGCTCCCTGTTTGATGTAATCT CGTTAGCTCAAAACTACCACTGCAACATTTCTGCTGCATTTACTTCCTCG ACACACAAAAGAACGAACTATTTCTTAGCCTAAATGTTTTGTTTCATTTA AGTTTACGTCATTTTTAAAACAAATTTTTTTTATTTTTATACATACAAAA AAAAAAATGAAAAAAGAAACAAATACAACAAAAGAGAAAAGCAAAGCCCA AAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TRAM-RB | 2100 | TRAM-RB | 1..2100 | 1..2099 | 10460 | 99.9 | Plus |
TRAM-RA | 2278 | TRAM-RA | 575..2068 | 608..2100 | 7430 | 99.9 | Plus |
TRAM-RC | 1896 | TRAM-RC | 403..1896 | 607..2099 | 7430 | 99.9 | Plus |
TRAM-RA | 2278 | TRAM-RA | 97..574 | 1..478 | 2390 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
INE-1 | 611 | INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). | 413..485 | 1970..2042 | 131 | 64.4 | Plus |
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1302..1410 | 2069..1960 | 115 | 58.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 830315..831715 | 607..2007 | 96 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RC | 1..1107 | 627..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RC | 1..1107 | 627..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RC | 1..1107 | 627..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RC | 1..1107 | 627..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RC | 1..1107 | 627..1733 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RB | 1..2100 | 1..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RB | 1..2100 | 1..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RB | 1..2100 | 1..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RB | 1..2100 | 1..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TRAM-RB | 1..2100 | 1..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 935232..935838 | 1..607 | 100 | -> | Plus |
X | 936330..937822 | 608..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 935232..935838 | 1..607 | 100 | -> | Plus |
X | 936330..937822 | 608..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 935232..935838 | 1..607 | 100 | -> | Plus |
X | 936330..937822 | 608..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 829265..829871 | 1..607 | 100 | -> | Plus |
arm_X | 830363..831855 | 608..2099 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 944428..945920 | 608..2099 | 99 | Plus | |
X | 943330..943936 | 1..607 | 100 | -> | Plus |
Translation from 626 to 1732
> LD27659.pep MAIKPGLGRKTSNKNPPILSHEFVIQNHADIISCVAMVFVVGLMNESTAA FASAFISLHHNVSGEDPSREQPYGKPYTYIAGIKDYCAIFFYTLTCIIMH AIIQEFVLDKISKKLHLSKFKLARFNESGQLVAFYLLSFVWGAHVLLKEG YLGQVAQLWEGFPDHPMSFLHKFYFVVQLAYYLHMLPELYFQKIKTKEEQ QPKIVHSISGFTLIVLAYTLSFQRLALVLLTLHYFSELLSHVFQLIGVFD REERLAKLRVVNNAVFFLIRFATSVIGVLTLYYGIGGVRSLLALGGLIAL QGYLVFSFITEQLRAKREAKKEAKREAKLALQTKKPAKTPKDKVKRKKES DLPEADQTSPSPIKQKLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22117-PA | 389 | GF22117-PA | 1..366 | 1..366 | 1796 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12820-PA | 368 | GG12820-PA | 1..368 | 1..368 | 1933 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11983-PA | 372 | GH11983-PA | 1..372 | 1..368 | 1665 | 82.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TRAM-PE | 368 | CG11642-PE | 1..368 | 1..368 | 1876 | 100 | Plus |
TRAM-PD | 368 | CG11642-PD | 1..368 | 1..368 | 1876 | 100 | Plus |
TRAM-PC | 368 | CG11642-PC | 1..368 | 1..368 | 1876 | 100 | Plus |
TRAM-PA | 368 | CG11642-PA | 1..368 | 1..368 | 1876 | 100 | Plus |
TRAM-PB | 368 | CG11642-PB | 1..368 | 1..368 | 1876 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15606-PA | 371 | GI15606-PA | 1..371 | 1..368 | 1684 | 85 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14213-PA | 370 | GL14213-PA | 1..370 | 1..368 | 1755 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11116-PA | 370 | GA11116-PA | 1..370 | 1..368 | 1750 | 91.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19101-PA | 367 | GM19101-PA | 1..367 | 1..368 | 1915 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16534-PA | 367 | GD16534-PA | 1..367 | 1..368 | 1915 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15210-PA | 371 | GJ15210-PA | 1..371 | 1..368 | 1704 | 85.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24971-PA | 380 | GK24971-PA | 1..380 | 1..368 | 1674 | 85.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16650-PA | 521 | GE16650-PA | 336..521 | 183..368 | 767 | 94.6 | Plus |
Translation from 626 to 1732
> LD27659.hyp MAIKPGLGRKTSNKNPPILSHEFVIQNHADIISCVAMVFVVGLMNESTAA FASAFISLHHNVSGEDPSREQPYGKPYTYIAGIKDYCAIFFYTLTCIIMH AIIQEFVLDKISKKLHLSKFKLARFNESGQLVAFYLLSFVWGAHVLLKEG YLGQVAQLWEGFPDHPMSFLHKFYFVVQLAYYLHMLPELYFQKIKTKEEQ QPKIVHSISGFTLIVLAYTLSFQRLALVLLTLHYFSELLSHVFQLIGVFD REERLAKLRVVNNAVFFLIRFATSVIGVLTLYYGIGGVRSLLALGGLIAL QGYLVFSFITEQLRAKREAKKEAKREAKLALQTKKPAKTPKDKVKRKKES DLPEADQTSPSPIKQKLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TRAM-PE | 368 | CG11642-PE | 1..368 | 1..368 | 1876 | 100 | Plus |
TRAM-PD | 368 | CG11642-PD | 1..368 | 1..368 | 1876 | 100 | Plus |
TRAM-PC | 368 | CG11642-PC | 1..368 | 1..368 | 1876 | 100 | Plus |
TRAM-PA | 368 | CG11642-PA | 1..368 | 1..368 | 1876 | 100 | Plus |
TRAM-PB | 368 | CG11642-PB | 1..368 | 1..368 | 1876 | 100 | Plus |