Clone LD27718 Report

Search the DGRC for LD27718

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:277
Well:18
Vector:pOT2
Associated Gene/TranscriptMen-RB
Protein status:LD27718.pep: gold
Preliminary Size:3305
Sequenced Size:3032

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10120 2001-01-01 Release 2 assignment
CG10120 2002-06-02 Blastp of sequenced clone
CG10120 2003-01-01 Sim4 clustering to Release 3
Men 2008-04-29 Release 5.5 accounting
Men 2008-08-15 Release 5.9 accounting
Men 2008-12-18 5.12 accounting

Clone Sequence Records

LD27718.complete Sequence

3032 bp (3032 high quality bases) assembled on 2002-06-02

GenBank Submission: AY118540

> LD27718.complete
CGGGTGCGAGCGGGAGGGCAGCACCGGACACTCTCCTTCTCCTTCTCCTT
TGGGCCGCCCGCTGCTAGCAAGTTGCCTCCGGTGTTCGCAGAGCCGCGAT
TTCAGCGCGAGTTCAGTTTTTGATTCAGTTTCAGGCGGTTCGGAGTTGCT
AAGTCAAGCGCAATAGCTCAAAATACACTTTTTTTAATTTTTGTTAATAA
CTGTTTTTAATAATTCCGGTGAAACATCGCGTGGTCAAGCGAACTGAGTT
AATTTTCGCGTTAGAAAAGTTCACAAGTTTTGCGTTTACCAAATAATTAA
CTATAACTATTTAACTGGAGCTAATTTAACTGAAATTTAGAACCCAAAAT
GGGTAATTCCAGTTCCATTTGCGCCGATCGCAATGTCATAACAAATTTCG
ATGAAAATGGCACGCCGGTTTATCCCACCGCCAACAATTCGCAGAGTCCT
TCCTCATATAGTCGCGGCAAAGAGCGCGAGCTCGGCTGTTACACGAAGAG
AAACAGCAACAGCAACAACAACAATAGCCATGAGAGAGAGAGTCAGAGCT
GTTGTAGTAGTCGTGTGTGTAAAAATCATACGACCACAACGACAACCACA
CTCGAATACGAACTTTCCAATTTCGCAAAACTAACGACACGAATCACAAC
GCAAAGTGCCGCCGAAGTGGACACATCGCCGCATACGGATACGGAAACGC
ATAGGGACAGAGATTCGAATCCGGGTAATATAGCCTTAGCCACCGATTTG
GAACTGCCCAAGGGTCTGCCGTTATCGTTATCCTCGCGACACCACTGGAA
TCAGCTGCAGAGCAGTTTGCACGCCCTTCACCACCAGCAACAGCAACAAC
AACAGCAACTACGTTCATACAGCTCCACTAGCGAAACAAATTTGGAAGAC
AAGATGAGCAAACCCGATTCGAAACTAGATAAATACGCGCAGCGCGATCG
CCTGGGCCTTTGGGGCACTGGTGACAATGAGGTGGTCGGCAGCCTCTCCG
GATTCACCCGACTCTTGGACAAGCGCTACTCAAAGGGCCTGGCCTTCACA
CACGAGGAGCGCCAGCAGTTGGGCATCCATGGCATGCTGCCCTATGTGGT
CCGTGAGCCCAGTGAGCAGGTGGAGCACTGCCGCGCTCTGCTGGCGCGAC
TGGATCAGGATCTGGACAAGTACATGTACCTGATCAGCCTATCGGAGCGG
AACGAGCGTCTGTTCTACAACGTGCTCAGCTCAGACATCGCCTACATGAT
GCCACTGGTGTACACGCCCACCGTGGGATTGGCCTGCCAGCGCTACAGTT
TGATCCACCAGAACGCCAAGGGCATGTTCATATCCATCAAGGACAAGGGA
CACATCTACGACGTGCTAAAGAACTGGCCGGAAACGGATGTGCGTGCCAT
CGTTGTCACGGACGGCGAGCGCATCCTGGGACTGGGAGATCTGGGCGCCA
ACGGAATGGGTATACCCGTGGGCAAACTGTCCCTGTATACGGCCTTGGCG
GGCATTAAGCCATCGCAGTGCCTGCCCATCACCTTGGATGTGGGCACCAA
TACCGAATCCATCCTGGAGGATCCCCTGTACATCGGTCTGCGCGAACGCA
GGGCCACTGGAGATCTGTACGATGAGTTCATCGATGAGTTCATGCATGCC
TGCGTTCGTCGCTTTGGTCAAAACTGCCTAATCCAGTTCGAGGACTTTGC
CAACGCCAATGCCTTCAGGCTGTTGTCCAAATACCGCGACTCCTTCTGCA
CCTTCAACGACGATATTCAAGGAACCGCGTCGGTGGCCGTGGCTGGTCTG
CTGGCCTCGCTAAAGATCAAGAAGACCCAGCTGAAGGATAACACGCTGTT
GTTCCTGGGCGCCGGAGAAGCGGCTCTTGGTATTGCCAACCTGTGCCTGA
TGGCCATGAAGGTGGAGGGTCTCACCGAGGAGGAGGCCAAGGCCCGCATC
TGGATGGTGGATAGCCGTGGTGTCATCACCCGCGATCGTCCAAAGGGCGG
ACTCACCGAACACAAGCTGCACTTTGCCCAGCTGCACGAACCCATCGATA
CTTTGGCAGAGGCGGTGCGAAAGGTGCGTCCCAATGTCCTGATTGGAGCG
GCTGCGCAGGGCGGCGCCTTCAACCAGGAGATCCTTGAGCTGATGGCCGA
TATTAATGAGACGCCGATCATCTTTGCACTGTCCAATCCGACCAGCAAGG
CGGAGTGCACCGCCGAGGAGGCGTATACGTACACCAAGGGGCGCTGCATC
TTCGCCAGCGGTTCGCCTTTTGCTCCTGTGACGTACAACAACAAGAAGTT
CTATCCGGGTCAGGGCAACAACTCGTACATTTTCCCTGGCGTGGCACTGG
GTGTTCTGTGTGCCGGCATGCTGAACATTCCCGAGCAGGTATTCTTGGTC
GCCGCCGAGCGCTTGGCGGAGCTGGTCTCCAAGGACGACCTGGCCAAGGG
CAGCTTGTATCCACCACTCAGCTCCATTGTCAGCTGTTCGATGGCCATTG
CCGAAAGGATTGTGGAGTACGCCTACAAAAACGGATTGGCCACTGTTCGT
CCAGAGCCGGTCAATAAGCTGGCGTTCATCAAGGCCCAGATGTACGATCT
GGACTATCCCCGATCCGTGCCCGCCACCTATAAGATGTAGATGATGGCCA
GATGATGAGGATCCATTCCGCCTAACCCCAGAAACCAAAAGGAGTGGCCA
TCAAAAGATATCCGGCAAGGGCGGCGAGCAGTAACCATGTTATTTATTTT
ATAATGTCGCACATTTGTCGTCTAGCATAATATCCAAATTTGTATCGCGG
CTAATTAACCACAACCACACACTATCCACCAACAACCATATTATAAAAAA
AAACCAACTAAAATGGAATGTCATCAGCTTGCGGCGCGCGATTTTGTATA
ATGCTAACTATGTAAATGGGATATTGATCTAATAGATATGTAAACAAATT
TTATGTAATCTTGAACAACACAAACTATTCTAAGGATATATACAAATAAA
GAAATAAACAAAAATAAAAAAAAAAAAAAAAA

LD27718.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:55:06
Subject Length Description Subject Range Query Range Score Percent Strand
Men-RB 3036 Men-RB 1..3017 1..3017 15085 100 Plus
Men.b 3211 Men.b 1..3017 1..3017 15085 100 Plus
Men.a 3203 Men.a 1..1964 1..1964 9820 100 Plus
Men.a 3203 Men.a 2018..3073 1962..3017 5280 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 8538347..8539400 3015..1962 5180 99.4 Minus
chr3R 27901430 chr3R 8539454..8540384 1964..1034 4610 99.7 Minus
chr3R 27901430 chr3R 8544655..8545281 1036..410 3120 99.8 Minus
chr3R 27901430 chr3R 8547389..8547798 410..1 2050 100 Minus
chr3R 27901430 chr3R 22977693..22978242 1247..1796 650 74.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:20:02 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:36:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 12713095..12714150 3017..1962 5280 100 Minus
3R 32079331 3R 12714204..12715134 1964..1034 4655 100 Minus
3R 32079331 3R 12719402..12720028 1036..410 3135 100 Minus
3R 32079331 3R 12722136..12722545 410..1 2050 100 Minus
3R 32079331 3R 27154667..27155216 1247..1796 650 74.5 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 12453926..12454981 3017..1962 5280 100 Minus
3R 31820162 3R 12455035..12455965 1964..1034 4655 100 Minus
3R 31820162 3R 12460233..12460859 1036..410 3135 100 Minus
3R 31820162 3R 12462967..12463376 410..1 2050 100 Minus
3R 31820162 3R 26895599..26895801 1348..1550 460 81.7 Plus
3R 31820162 3R 26895868..26896047 1617..1796 285 77.2 Plus
3R 31820162 3R 26895498..26895545 1247..1294 150 87.5 Plus
Blast to na_te.dros performed 2019-03-16 10:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2330..2455 786..910 176 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..2352 819..859 133 80.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6816 829..910 132 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2413..2476 460..523 131 67.2 Plus
412 7567 412 412 7567bp 1748..1852 2901..3005 128 60.4 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3276..3322 480..526 127 74.5 Plus
roo 9092 roo DM_ROO 9092bp 1079..1159 787..864 127 65.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..6809 787..862 126 65.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6788 829..862 125 85.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6886 829..911 125 63.9 Plus
accord2 7650 accord2 QBERT 7650bp 4379..4444 546..480 125 69.1 Minus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2593..2658 797..859 124 69.7 Plus
Doc3-element 4740 Doc3-element DOC3 4740bp 524..577 825..877 123 72.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2316..2352 492..528 122 81.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2360..2432 786..858 121 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6752..6829 787..861 121 65.4 Plus
ZAM 8435 ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). 1716..1768 2816..2868 121 69.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1551..1633 829..908 120 62.7 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 981..1036 829..885 120 70.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2381..2420 491..530 119 77.5 Plus
roo 9092 roo DM_ROO 9092bp 1092..1160 460..528 119 67.1 Plus
roo 9092 roo DM_ROO 9092bp 1103..1178 829..904 118 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2377..2401 499..523 116 96 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6843..6905 800..862 116 68.8 Plus

LD27718.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:37:44 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 8538369..8539397 1965..2993 99 <- Minus
chr3R 8539454..8540382 1036..1964 99 <- Minus
chr3R 8544656..8545280 411..1035 99 <- Minus
chr3R 8547389..8547798 1..410 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:07:12 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2292 349..2640 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:33:04 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2292 349..2640 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:14:49 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2292 349..2640 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:24:25 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2292 349..2640 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:12:49 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2292 349..2640 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:03:50 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2993 1..2993 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:33:04 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2993 1..2993 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:14:49 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2890 104..2993 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:24:26 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2993 1..2993 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:12:49 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
Men-RB 1..2890 104..2993 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:37:44 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12713119..12714147 1965..2993 100 <- Minus
3R 12714204..12715132 1036..1964 100 <- Minus
3R 12719403..12720027 411..1035 100 <- Minus
3R 12722136..12722545 1..410 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:37:44 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12713119..12714147 1965..2993 100 <- Minus
3R 12714204..12715132 1036..1964 100 <- Minus
3R 12719403..12720027 411..1035 100 <- Minus
3R 12722136..12722545 1..410 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:37:44 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12713119..12714147 1965..2993 100 <- Minus
3R 12714204..12715132 1036..1964 100 <- Minus
3R 12719403..12720027 411..1035 100 <- Minus
3R 12722136..12722545 1..410 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:14:49 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 8538841..8539869 1965..2993 100 <- Minus
arm_3R 8539926..8540854 1036..1964 100 <- Minus
arm_3R 8545125..8545749 411..1035 100 <- Minus
arm_3R 8547858..8548267 1..410 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:57:06 Download gff for LD27718.complete
Subject Subject Range Query Range Percent Splice Strand
3R 12453950..12454978 1965..2993 100 <- Minus
3R 12455035..12455963 1036..1964 100 <- Minus
3R 12460234..12460858 411..1035 100 <- Minus
3R 12462967..12463376 1..410 100   Minus

LD27718.pep Sequence

Translation from 348 to 2639

> LD27718.pep
MGNSSSICADRNVITNFDENGTPVYPTANNSQSPSSYSRGKERELGCYTK
RNSNSNNNNSHERESQSCCSSRVCKNHTTTTTTTLEYELSNFAKLTTRIT
TQSAAEVDTSPHTDTETHRDRDSNPGNIALATDLELPKGLPLSLSSRHHW
NQLQSSLHALHHQQQQQQQQLRSYSSTSETNLEDKMSKPDSKLDKYAQRD
RLGLWGTGDNEVVGSLSGFTRLLDKRYSKGLAFTHEERQQLGIHGMLPYV
VREPSEQVEHCRALLARLDQDLDKYMYLISLSERNERLFYNVLSSDIAYM
MPLVYTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETDVRA
IVVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQCLPITLDVGT
NTESILEDPLYIGLRERRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDF
ANANAFRLLSKYRDSFCTFNDDIQGTASVAVAGLLASLKIKKTQLKDNTL
LFLGAGEAALGIANLCLMAMKVEGLTEEEAKARIWMVDSRGVITRDRPKG
GLTEHKLHFAQLHEPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMA
DINETPIIFALSNPTSKAECTAEEAYTYTKGRCIFASGSPFAPVTYNNKK
FYPGQGNNSYIFPGVALGVLCAGMLNIPEQVFLVAAERLAELVSKDDLAK
GSLYPPLSSIVSCSMAIAERIVEYAYKNGLATVRPEPVNKLAFIKAQMYD
LDYPRSVPATYKM*

LD27718.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:20:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18099-PA 814 GF18099-PA 1..814 1..763 3117 74.4 Plus
Dana\GF23280-PA 622 GF23280-PA 47..601 207..761 1736 57.7 Plus
Dana\GF11264-PA 603 GF11264-PA 45..583 222..761 1339 44.2 Plus
Dana\GF11265-PA 615 GF11265-PA 43..578 224..761 1209 44 Plus
Dana\GF11263-PA 619 GF11263-PA 4..601 175..763 1024 35.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:20:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17100-PA 769 GG17100-PA 1..769 1..763 3663 91.5 Plus
Dere\GG11530-PA 617 GG11530-PA 39..596 210..761 1754 58.6 Plus
Dere\GG22268-PA 602 GG22268-PA 42..579 222..761 1242 43.5 Plus
Dere\GG22267-PA 610 GG22267-PA 50..588 222..761 1240 43.6 Plus
Dere\GG22266-PA 634 GG22266-PA 63..616 209..763 1144 39.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19210-PA 815 GH19210-PA 1..815 1..763 2824 66 Plus
Dgri\GH20613-PA 869 GH20613-PA 277..836 208..761 1743 58 Plus
Dgri\GH17523-PA 629 GH17523-PA 49..608 208..761 1739 58 Plus
Dgri\GH20647-PA 608 GH20647-PA 47..589 219..762 1355 45.6 Plus
Dgri\GH20645-PA 615 GH20645-PA 22..595 194..761 1116 37.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:35:59
Subject Length Description Subject Range Query Range Score Percent Strand
Men-PB 763 CG10120-PB 1..763 1..763 3959 100 Plus
Men-PA 759 CG10120-PA 18..759 22..763 3848 100 Plus
Men-PC 578 CG10120-PC 1..578 186..763 2982 100 Plus
Men-b-PC 624 CG5889-PC 39..596 210..761 1693 58.8 Plus
Men-b-PB 621 CG5889-PB 39..596 210..761 1693 58.8 Plus
Men-b-PA 617 CG5889-PA 39..596 210..761 1693 58.8 Plus
Menl-2-PE 600 CG7969-PE 42..579 222..761 1223 43.3 Plus
Menl-2-PA 600 CG7969-PA 42..579 222..761 1223 43.3 Plus
Menl-2-PD 558 CG7969-PD 8..537 230..761 1206 43.6 Plus
Menl-1-PD 610 CG7964-PD 56..588 228..761 1183 43.9 Plus
CG7848-PA 633 CG7848-PA 28..615 163..763 1102 38.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:20:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24244-PA 818 GI24244-PA 130..818 61..763 2755 73.9 Plus
Dmoj\GI23201-PA 622 GI23201-PA 42..601 208..761 1733 58 Plus
Dmoj\GI19012-PA 609 GI19012-PA 47..588 219..761 1297 45.3 Plus
Dmoj\GI19011-PA 610 GI19011-PA 28..590 200..761 1159 38.7 Plus
Dmoj\GI24244-PA 818 GI24244-PA 1..36 1..36 164 80.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:20:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23167-PA 438 GL23167-PA 1..438 326..763 2132 89 Plus
Dper\GL23904-PA 625 GL23904-PA 47..604 210..761 1704 57.2 Plus
Dper\GL11344-PA 602 GL11344-PA 38..567 220..751 1328 46.6 Plus
Dper\GL11345-PA 597 GL11345-PA 41..578 222..761 1299 44.6 Plus
Dper\GL11343-PA 617 GL11343-PA 27..599 183..763 1177 40.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:20:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10087-PB 827 GA10087-PB 129..827 65..763 2928 80.5 Plus
Dpse\GA10087-PA 825 GA10087-PA 127..825 65..763 2928 80.5 Plus
Dpse\GA19206-PB 632 GA19206-PB 47..604 210..761 1697 57 Plus
Dpse\GA19206-PA 625 GA19206-PA 47..604 210..761 1697 57 Plus
Dpse\GA19206-PC 629 GA19206-PC 47..604 210..761 1695 57 Plus
Dpse\GA10087-PA 825 GA10087-PA 1..36 1..36 173 86.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:20:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25984-PA 759 GM25984-PA 1..759 1..763 4004 97.5 Plus
Dsec\GM10372-PA 617 GM10372-PA 39..596 210..761 1758 58.6 Plus
Dsec\GM20057-PA 598 GM20057-PA 42..579 222..761 1259 43.1 Plus
Dsec\GM20056-PA 610 GM20056-PA 50..588 222..761 1230 43.4 Plus
Dsec\GM20055-PA 633 GM20055-PA 31..615 166..763 1144 38.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:20:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\Men-PA 759 GD20544-PA 1..759 1..763 4016 97.9 Plus
Dsim\GD25538-PA 600 GD25538-PA 42..579 222..761 1261 43.3 Plus
Dsim\GD25537-PA 610 GD25537-PA 50..588 222..761 1234 43.6 Plus
Dsim\GD25536-PA 627 GD25536-PA 25..609 166..763 1150 38.7 Plus
Dsim\GD21330-PA 244 GD21330-PA 39..233 210..399 611 59.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:20:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10817-PA 816 GJ10817-PA 1..816 1..763 2835 66.7 Plus
Dvir\GJ22862-PA 623 GJ22862-PA 43..602 208..761 1722 58 Plus
Dvir\GJ19974-PA 610 GJ19974-PA 32..582 204..753 1138 38.8 Plus
Dvir\GJ19975-PA 456 GJ19975-PA 2..438 325..762 1058 47.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:20:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10867-PA 842 GK10867-PA 146..842 66..763 2859 79.5 Plus
Dwil\GK11883-PA 622 GK11883-PA 42..601 208..761 1752 58 Plus
Dwil\GK21603-PA 801 GK21603-PA 257..790 226..761 1317 45.8 Plus
Dwil\GK21699-PA 616 GK21699-PA 16..598 184..763 1234 41 Plus
Dwil\GK21603-PA 801 GK21603-PA 1..261 370..631 645 47.7 Plus
Dwil\GK10867-PA 842 GK10867-PA 1..36 1..36 175 86.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:20:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24490-PA 768 GE24490-PA 1..768 1..763 3675 92.3 Plus
Dyak\GE23720-PA 617 GE23720-PA 39..596 210..761 1750 58.4 Plus
Dyak\GE14061-PA 602 GE14061-PA 42..580 222..762 1291 44.2 Plus
Dyak\GE14060-PA 609 GE14060-PA 50..588 222..761 1278 44.9 Plus
Dyak\GE14059-PA 638 GE14059-PA 55..620 196..763 1169 40.4 Plus

LD27718.hyp Sequence

Translation from 348 to 2639

> LD27718.hyp
MGNSSSICADRNVITNFDENGTPVYPTANNSQSPSSYSRGKERELGCYTK
RNSNSNNNNSHERESQSCCSSRVCKNHTTTTTTTLEYELSNFAKLTTRIT
TQSAAEVDTSPHTDTETHRDRDSNPGNIALATDLELPKGLPLSLSSRHHW
NQLQSSLHALHHQQQQQQQQLRSYSSTSETNLEDKMSKPDSKLDKYAQRD
RLGLWGTGDNEVVGSLSGFTRLLDKRYSKGLAFTHEERQQLGIHGMLPYV
VREPSEQVEHCRALLARLDQDLDKYMYLISLSERNERLFYNVLSSDIAYM
MPLVYTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETDVRA
IVVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQCLPITLDVGT
NTESILEDPLYIGLRERRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDF
ANANAFRLLSKYRDSFCTFNDDIQGTASVAVAGLLASLKIKKTQLKDNTL
LFLGAGEAALGIANLCLMAMKVEGLTEEEAKARIWMVDSRGVITRDRPKG
GLTEHKLHFAQLHEPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMA
DINETPIIFALSNPTSKAECTAEEAYTYTKGRCIFASGSPFAPVTYNNKK
FYPGQGNNSYIFPGVALGVLCAGMLNIPEQVFLVAAERLAELVSKDDLAK
GSLYPPLSSIVSCSMAIAERIVEYAYKNGLATVRPEPVNKLAFIKAQMYD
LDYPRSVPATYKM*

LD27718.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:34
Subject Length Description Subject Range Query Range Score Percent Strand
Men-PB 763 CG10120-PB 1..763 1..763 3959 100 Plus
Men-PA 759 CG10120-PA 18..759 22..763 3848 100 Plus
Men-PC 578 CG10120-PC 1..578 186..763 2982 100 Plus
Men-b-PA 617 CG5889-PA 39..596 210..761 1693 58.8 Plus
Men-b-PB 621 CG5889-PB 39..596 210..761 1693 58.8 Plus