BDGP Sequence Production Resources |
Search the DGRC for LD27763
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 277 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | barc-RA |
Protein status: | LD27763.pep: gold |
Preliminary Size: | 2317 |
Sequenced Size: | 2247 |
Gene | Date | Evidence |
---|---|---|
CG6049 | 2001-01-01 | Release 2 assignment |
CG6049 | 2001-10-10 | Blastp of sequenced clone |
CG6049 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6049 | 2008-04-29 | Release 5.5 accounting |
CG6049 | 2008-08-15 | Release 5.9 accounting |
CG6049 | 2008-12-18 | 5.12 accounting |
2247 bp (2247 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061345
> LD27763.complete ATTTCGTTTGCATTATTTTTTATTAAATTGTACTTAAAGACCAAATGCAA TTGCTCAGAAAAGTGCAGGTGCAAGTTTTATAAAATCGTGCAGACCCGCG AAGCCTGCGACTGATCACCATGTGCCTGCCCATTGGTTAAACTCAGCTCG CTGTTAACTTTGTTTGTGTTTTTGTTGTGACTTCCAGCCGGCGGACGCAG TTCATCTATTTGGAAGGTAAGCAGAATTTAGAACGCAAAATGAGCGACGA AGGTGGCTGTAAATCGGAGCAGTTAGAGAAATCCGAAGAAGCGGAGGAAA AAAAGGGGGACGCAGAAGGACAGGAAGCGAAAGCTCCAATTCTCAACCCC ATTTCAGTCCCAGAAGTTGATGACAAGCCGACGGAAAATAAACCCCAATC GGATAATCACGCGGACAAAACGGACGAAACTCCATCTCAGGACTTTGCCG CCTACGAGGAGCACATGACCTATGGAGCGGACGGCGGGGCTATATACACG GATCCCAGCACGAAGCAGAAATACAAGTGGTGCGCCACCGGAAACAATTG GCAACCCTTAGGCGTTGATGAAGATGTTGATGGACAGGCTGAAGATCCCT ACGAAAACGAGCACTACAAGTGGTGTCCCAAATCCCAACAGTGGTTGCCA AAAAAACAGGAAACTGAAACGGAGCACTACAAGTGGGATGACGAGCAAAA GAAGTGGGTGCCCAAGCACCCGAACCCTGGCCAGGAAGGGGTTTGCGGTG TGGATGAGCATGGCGAGCGCACTTACACCGACAAGGATGGCGTCGAGTTC TTTTGGGATGCAACCAAGAGTGCTTGGTTCCCCAAGATCGATGATGATTT CATGGCTCGCTACCAAATGAACTATGGATTTATTGACAACACATCAGCGG GGGAGAAAGAGAAGGCTGAAAAGGAGGCGGCTGAGGCCAAGAGAAAGGAG GAGGAACTCAAGCGTATGACGGCAGAGGCGGAAGCTGCTATGTCTAGAGA CAATCCAGCATCCAGCGCTGCAGTGCCCACTGGCAAGCGAAAGGCCCAGG AGCCCCCAAAATGGTTCGAAATGGATCCATTGCAGAACACCAAGGTGTAT GTCTCCAATTTGCCCCTGGACATTACTATGGATGAGTTTGCCGATCTGAT GGGCAAGTGTGGCATGGTAATGAGAGATCCGCAGACGCAGAAATTCAAGC TGAAACTATATGCCGAAAAGGATGGACAAATCAAGGGCGATGGCTTGTGT GATTACATCAAGGTGGAGAGTGTCAATCTGGCGCTGAAAATTTTAGACGA GTACAATCTGCGTGGCCACAAGATTCGTGTCCAGAGGGCTCAGTTCCAAA TGCGTGGAGAATACAATCCCGCTCTGAAGCCCAAACGCAAGAAGAAGGAC AAAGAGAAATTGCAAAAGATGAAGGAAAAGTTATTTGATTGGCGTCCAGA TAAATTGCGTGGCGAACGGTCAAAGAATGAGAAAACCGTCATCATTAAAA ACCTCTTCACCCCAGAACTCTTTGAGAAGGAAGTGGAGCTCATATTGGAG TACCAAAACAATCTGCGTGAGGAGTGCAGCAAATGCGGGATGGTCCGTAA AGTGGTTATCTATGATCGCCATCCTGATGGTGTAGCCCAGATCAACATGG CCTCGCCGGAGGAAGCTGACCTCGTCATTCAAATGATGCAGGGGCGTTAT TTTGGACAGCGGCAACTAAGTGCGGAGGCCTGGGATGGCAAGACCAAATA CAAAATTGAGGAATCAGCTGTCGAGGCGCATGAACGGCTTTCCAAATGGG ATGAATTCTTGGCAGAAGAAGAAACCGATAAAAAAGCTTCCGAGGATATG AAGGAGGAGGACGTTGACTCGCCCGAAAACCAGCTTTTGCCAGGAGACGC CACCCCTTAGTTTTCATTTACCTGCGATCGTTTTCACGCGGTTCAAGAAT CTCCAGGACCACCTCGTTGGCCTGCTCGTTCGGATAGGTGGCGTTCCAGC GGTTGTAGATCTTGTAGCGATTGGGGCCGCTCACCTTTGGCATCTTGTGC TGACATATGAAGCGCAGCTTATCCGAGCAGGGCCGCGCCGACCAGCGGTA CTTGAGGCTTGGATCGTAGATGGCACAGTTATTATCAAGCGGTTGGCTGT TGGAGATAAGTTGCACATAGCTAGAATTGTTGCTTAAGCGTTAAATCAAT CTACGGAAATAAAGAAAGAAAGGAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG6049-RA | 2325 | CG6049-RA | 98..2323 | 1..2226 | 11130 | 100 | Plus |
CG6049-RB | 2329 | CG6049-RB | 98..2327 | 1..2226 | 11065 | 99.8 | Plus |
CG6049-RC | 2310 | CG6049-RC | 312..2308 | 230..2226 | 9985 | 100 | Plus |
CG6049-RC | 2310 | CG6049-RC | 98..313 | 1..216 | 1080 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 21413678..21414507 | 1059..230 | 4150 | 100 | Minus |
chr3L | 24539361 | chr3L | 21409348..21409817 | 2223..1754 | 2350 | 100 | Minus |
chr3L | 24539361 | chr3L | 21421800..21422030 | 231..1 | 1155 | 100 | Minus |
chr3L | 24539361 | chr3L | 21413412..21413616 | 1264..1060 | 1025 | 100 | Minus |
chr3L | 24539361 | chr3L | 21410066..21410252 | 1616..1430 | 935 | 100 | Minus |
chr3L | 24539361 | chr3L | 21410319..21410489 | 1431..1261 | 855 | 100 | Minus |
chr3L | 24539361 | chr3L | 21409878..21410014 | 1753..1617 | 685 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 21424718..21425547 | 1059..230 | 4150 | 100 | Minus |
3L | 28110227 | 3L | 21420385..21420857 | 2226..1754 | 2365 | 100 | Minus |
3L | 28110227 | 3L | 21432840..21433070 | 231..1 | 1155 | 100 | Minus |
3L | 28110227 | 3L | 21424452..21424656 | 1264..1060 | 1025 | 100 | Minus |
3L | 28110227 | 3L | 21421106..21421292 | 1616..1430 | 935 | 100 | Minus |
3L | 28110227 | 3L | 21421359..21421529 | 1431..1261 | 855 | 100 | Minus |
3L | 28110227 | 3L | 21420918..21421054 | 1753..1617 | 685 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 21417818..21418647 | 1059..230 | 4150 | 100 | Minus |
3L | 28103327 | 3L | 21413485..21413957 | 2226..1754 | 2365 | 100 | Minus |
3L | 28103327 | 3L | 21425940..21426170 | 231..1 | 1155 | 100 | Minus |
3L | 28103327 | 3L | 21417552..21417756 | 1264..1060 | 1025 | 100 | Minus |
3L | 28103327 | 3L | 21414206..21414392 | 1616..1430 | 935 | 100 | Minus |
3L | 28103327 | 3L | 21414459..21414629 | 1431..1261 | 855 | 100 | Minus |
3L | 28103327 | 3L | 21414018..21414154 | 1753..1617 | 685 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 21410066..21410252 | 1430..1616 | 100 | <- | Minus |
chr3L | 21410321..21410487 | 1263..1429 | 100 | <- | Minus |
chr3L | 21413414..21413616 | 1060..1262 | 100 | <- | Minus |
chr3L | 21409348..21409817 | 1754..2223 | 100 | <- | Minus |
chr3L | 21409878..21410014 | 1617..1753 | 100 | <- | Minus |
chr3L | 21413678..21414505 | 232..1059 | 100 | <- | Minus |
chr3L | 21421800..21422030 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6049-RA | 1..1671 | 240..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6049-RA | 1..1671 | 240..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
barc-RC | 1..1671 | 240..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6049-RA | 1..1671 | 240..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
barc-RC | 1..1671 | 240..1910 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6049-RA | 98..2320 | 1..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6049-RA | 98..2320 | 1..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
barc-RA | 65..2287 | 1..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6049-RA | 98..2320 | 1..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
barc-RA | 65..2287 | 1..2223 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21420388..21420857 | 1754..2223 | 100 | <- | Minus |
3L | 21420918..21421054 | 1617..1753 | 100 | <- | Minus |
3L | 21421106..21421292 | 1430..1616 | 100 | <- | Minus |
3L | 21421361..21421527 | 1263..1429 | 100 | <- | Minus |
3L | 21424454..21424656 | 1060..1262 | 100 | <- | Minus |
3L | 21424718..21425545 | 232..1059 | 100 | <- | Minus |
3L | 21432840..21433070 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21420388..21420857 | 1754..2223 | 100 | <- | Minus |
3L | 21420918..21421054 | 1617..1753 | 100 | <- | Minus |
3L | 21421106..21421292 | 1430..1616 | 100 | <- | Minus |
3L | 21421361..21421527 | 1263..1429 | 100 | <- | Minus |
3L | 21424454..21424656 | 1060..1262 | 100 | <- | Minus |
3L | 21424718..21425545 | 232..1059 | 100 | <- | Minus |
3L | 21432840..21433070 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21420388..21420857 | 1754..2223 | 100 | <- | Minus |
3L | 21420918..21421054 | 1617..1753 | 100 | <- | Minus |
3L | 21421106..21421292 | 1430..1616 | 100 | <- | Minus |
3L | 21421361..21421527 | 1263..1429 | 100 | <- | Minus |
3L | 21424454..21424656 | 1060..1262 | 100 | <- | Minus |
3L | 21424718..21425545 | 232..1059 | 100 | <- | Minus |
3L | 21432840..21433070 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 21413488..21413957 | 1754..2223 | 100 | <- | Minus |
arm_3L | 21414018..21414154 | 1617..1753 | 100 | <- | Minus |
arm_3L | 21414206..21414392 | 1430..1616 | 100 | <- | Minus |
arm_3L | 21414461..21414627 | 1263..1429 | 100 | <- | Minus |
arm_3L | 21417554..21417756 | 1060..1262 | 100 | <- | Minus |
arm_3L | 21417818..21418645 | 232..1059 | 100 | <- | Minus |
arm_3L | 21425940..21426170 | 1..231 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 21414461..21414627 | 1263..1429 | 100 | <- | Minus |
3L | 21417554..21417756 | 1060..1262 | 100 | <- | Minus |
3L | 21413488..21413957 | 1754..2223 | 100 | <- | Minus |
3L | 21414018..21414154 | 1617..1753 | 100 | <- | Minus |
3L | 21414206..21414392 | 1430..1616 | 100 | <- | Minus |
3L | 21417818..21418645 | 232..1059 | 100 | <- | Minus |
3L | 21425940..21426170 | 1..231 | 100 | Minus |
Translation from 239 to 1909
> LD27763.pep MSDEGGCKSEQLEKSEEAEEKKGDAEGQEAKAPILNPISVPEVDDKPTEN KPQSDNHADKTDETPSQDFAAYEEHMTYGADGGAIYTDPSTKQKYKWCAT GNNWQPLGVDEDVDGQAEDPYENEHYKWCPKSQQWLPKKQETETEHYKWD DEQKKWVPKHPNPGQEGVCGVDEHGERTYTDKDGVEFFWDATKSAWFPKI DDDFMARYQMNYGFIDNTSAGEKEKAEKEAAEAKRKEEELKRMTAEAEAA MSRDNPASSAAVPTGKRKAQEPPKWFEMDPLQNTKVYVSNLPLDITMDEF ADLMGKCGMVMRDPQTQKFKLKLYAEKDGQIKGDGLCDYIKVESVNLALK ILDEYNLRGHKIRVQRAQFQMRGEYNPALKPKRKKKDKEKLQKMKEKLFD WRPDKLRGERSKNEKTVIIKNLFTPELFEKEVELILEYQNNLREECSKCG MVRKVVIYDRHPDGVAQINMASPEEADLVIQMMQGRYFGQRQLSAEAWDG KTKYKIEESAVEAHERLSKWDEFLAEEETDKKASEDMKEEDVDSPENQLL PGDATP*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24193-PA | 555 | GF24193-PA | 8..555 | 17..556 | 1985 | 78 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13238-PA | 554 | GG13238-PA | 1..554 | 1..556 | 2467 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14692-PA | 569 | GH14692-PA | 53..560 | 42..540 | 1920 | 76 | Plus |
Dgri\GH11790-PA | 179 | GH11790-PA | 1..166 | 371..536 | 674 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
barc-PA | 556 | CG6049-PA | 1..556 | 1..556 | 2989 | 100 | Plus |
barc-PC | 556 | CG6049-PC | 1..556 | 1..556 | 2989 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13305-PA | 265 | GI13305-PA | 1..224 | 301..524 | 1030 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24582-PA | 232 | GL24582-PA | 27..221 | 342..536 | 836 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19321-PA | 601 | GA19321-PA | 96..590 | 39..536 | 1870 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22141-PA | 649 | GM22141-PA | 433..649 | 340..556 | 986 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12119-PA | 605 | GD12119-PA | 440..605 | 340..505 | 865 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12075-PA | 541 | GJ12075-PA | 3..523 | 9..531 | 1894 | 73.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20417-PA | 402 | GK20417-PA | 114..393 | 63..341 | 1076 | 74.1 | Plus |
Dwil\GK20418-PA | 173 | GK20418-PA | 1..158 | 371..528 | 689 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22336-PA | 554 | GE22336-PA | 1..554 | 1..556 | 2467 | 91 | Plus |
Translation from 239 to 1909
> LD27763.hyp MSDEGGCKSEQLEKSEEAEEKKGDAEGQEAKAPILNPISVPEVDDKPTEN KPQSDNHADKTDETPSQDFAAYEEHMTYGADGGAIYTDPSTKQKYKWCAT GNNWQPLGVDEDVDGQAEDPYENEHYKWCPKSQQWLPKKQETETEHYKWD DEQKKWVPKHPNPGQEGVCGVDEHGERTYTDKDGVEFFWDATKSAWFPKI DDDFMARYQMNYGFIDNTSAGEKEKAEKEAAEAKRKEEELKRMTAEAEAA MSRDNPASSAAVPTGKRKAQEPPKWFEMDPLQNTKVYVSNLPLDITMDEF ADLMGKCGMVMRDPQTQKFKLKLYAEKDGQIKGDGLCDYIKVESVNLALK ILDEYNLRGHKIRVQRAQFQMRGEYNPALKPKRKKKDKEKLQKMKEKLFD WRPDKLRGERSKNEKTVIIKNLFTPELFEKEVELILEYQNNLREECSKCG MVRKVVIYDRHPDGVAQINMASPEEADLVIQMMQGRYFGQRQLSAEAWDG KTKYKIEESAVEAHERLSKWDEFLAEEETDKKASEDMKEEDVDSPENQLL PGDATP*