BDGP Sequence Production Resources |
Search the DGRC for LD27791
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 277 |
Well: | 91 |
Vector: | pOT2 |
Associated Gene/Transcript | mol-RA |
Protein status: | LD27791.pep: gold |
Preliminary Size: | 2213 |
Sequenced Size: | 2207 |
Gene | Date | Evidence |
---|---|---|
CG4482 | 2001-01-01 | Release 2 assignment |
CG15268 | 2001-01-01 | Release 2 assignment |
CG4482 | 2001-10-10 | Blastp of sequenced clone |
CG4482 | 2003-01-01 | Sim4 clustering to Release 3 |
mol | 2008-04-29 | Release 5.5 accounting |
mol | 2008-08-15 | Release 5.9 accounting |
mol | 2008-12-18 | 5.12 accounting |
2207 bp (2207 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061346
> LD27791.complete TCGAAACGGACGCAGATTTTTATACGTCTTAACGGCTAACTCGAAGCTAT AAATTGGACATCAAAATTGGATTATACAAAAATAAAAAAAAATAACAAAG TGAACACGAAAAGTTAATAACAATTATTTTGTATGCCGGTTTCTTCTTGA CAAGTTTGATCCCAAAACCCCGACATCAGCAACAGCAACCAGCATGAAAG GCTGGTTCGACGCGTTTCGAGACGATGGGGGACCAACGCTATATTCCTTC TCAAATCGAACACCCGTAACCGGAGATGTCTCAATCGTAGCCGTCTCAGT GCTATTTGCCACATTCTATGTAGCATTTTTAGTCATCTTTCCGGGTGTCA GAAAACAGAAATTCACAACGTTTTCGACAGTCACATTGAGCCTTTTTGTG GGTCTAGTCATATTAATCACTCGCCTGGGATCCGCGTGGCATGTGGCACA TGCAACTATCATCGCGCCATACAAAGCCTTCTCACGCGAGAAGCTCCCAG CGCGCATCGGCACCCACATTGGCCTCATGCATGTCAATGTGACGCTGACG GCGATTCCCATTGGAAACTGGACACCGCCGGATATAGACTACAACGAACG CTTCACCTGGGAGGGAGCCAATGACATGAGTGCCAACTATCGTCACGCCC TCCAGCGGGGTCTCCCCTTTCCCATCCTGACCGTTGCCGAATACTTTAGC CTGGGCCGTGAGGGATTCTCGTGGGGTGGACAGTACCGGGCTGCGGGATA TTTCGCGAGCATAATGCTCTGGGCCTCGCTGGCCTCGTGGCTGCTGATGA ACCTGCTGCTGATAGCGGTACCCCGATATGGGGCCTATATGAAGGCTTTG ACAGGTGCCTTGCTGGTCTGCACCACGGTGGGCTATCATTGCCTGCTCCC GAAGAGGCCTTTGTCCATTCACCTCGAAGGCGGACGCCTGGAGTTTCATT TCGGATGGTGCTACTGGCTGGTCTTGGTGGCAGGCATTCTCTGCTTTATT GCGGGAGTTCTGATCTCCATTATTGACTTGGTTTGGCCGCACACCTTCTC CACTGTGCTGGAGGTATACTACGGCACGCCATACGATCGCCATGTGATTC TGGAGGAGTCCAGTGATGTGCGTTATCGAAAGCCGCGCAACAGTCGCAGC TTAGAGGATCCACCTGGACTGGGCTCCCGCATCCTGCGCCGCCTCAGCTC CAAGGCACGTGACTTGCAACCTGGCACGGCACCGCGTCGCGATAGTCCAG CCGGAGTGTCCAGCAGCGGTGGAGTTGAAAACAAGGGCTTCCAGTCGGAT GCACCAAAGAGTCCTTGGAGATATCCCTTCCGAAGGTCGCAGCAAATGGC GCAGCAGCAGCATTCGCATCCACTGCATCAGCATCCGTTGCAGCAGCATC ATCAGCACCACCAGCACCACCATCAGCAGCAGCTGCAGTTTGTGGGCGGT CCGGTGGTGCAGCATCCCATGCATCATATGCAGCGCACCATGTCGCAGGA TTCAGGATCCAGCATTGCCTCGGCAGCCGTGCAAATCTCCCCGCTGCACA AGCATGCTTTGGCGCGGATGTTGCCTAATCCCCCAGTGGAGCGTATTCGT GACATGGATCACTGGTGATTGCCATTGGACAAACCATAAAAATCGACTAT TTTTATTGGGCTTACATAACTCTTGACTAATTGGAAATAATTTTAGAGGA AATCTTAAAACAAAACATTTTGTGATAATTTCTTAATTTAAACAAAACAA ATCAACACAAATTAGGATGAAAAATATTTTATAATTGACCAGATCACATA CTTTAACTTTGATAATATAACATAAAAAACGAAAACGATGTTATTCTTAA CTGTACTTTTAATTAAATTATTTTAAATGTTAAGCTAACCATGTAATAAC AATCGACGAATCAATTTTAGATATAAGAATGTTTTTTAGTGATGTTTATT TGTGATAAGACAATCCTGCCACACACGCACAGAGAAATCGACACATACAG GAGCGAGAATTATGGCAAAAAATCAATGTTTATTTCTAAAGTAATTTATT ATTTGTAATTTGAATTCAATGCCAGTGTCTATAACGAATAAGTTGACAAC AATATGTGTAAAATCCGTTTAAGTTTAATGTATAAGCTGACCATGTTTAA AAACGATAAGATTGGAAAAAAACACAATGACGTAAATAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 14975274..14975867 | 1575..982 | 2955 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 14974535..14975140 | 2187..1576 | 2920 | 98.9 | Minus |
chr2L | 23010047 | chr2L | 14975997..14976430 | 984..551 | 2170 | 100 | Minus |
chr2L | 23010047 | chr2L | 14991093..14991293 | 358..158 | 1005 | 100 | Minus |
chr2L | 23010047 | chr2L | 14992686..14992822 | 158..22 | 685 | 100 | Minus |
chr2L | 23010047 | chr2L | 14982736..14982870 | 551..417 | 675 | 100 | Minus |
chr2L | 23010047 | chr2L | 14982982..14983042 | 416..356 | 305 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14975747..14976358 | 2187..1576 | 3060 | 100 | Minus |
2L | 23513712 | 2L | 14976492..14977085 | 1575..982 | 2970 | 100 | Minus |
2L | 23513712 | 2L | 14977214..14977647 | 984..551 | 2170 | 100 | Minus |
2L | 23513712 | 2L | 14992307..14992507 | 358..158 | 1005 | 100 | Minus |
2L | 23513712 | 2L | 14993899..14994035 | 158..22 | 685 | 100 | Minus |
2L | 23513712 | 2L | 14983950..14984084 | 551..417 | 675 | 100 | Minus |
2L | 23513712 | 2L | 14984196..14984256 | 416..356 | 305 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 14975747..14976358 | 2187..1576 | 3060 | 100 | Minus |
2L | 23513712 | 2L | 14976492..14977085 | 1575..982 | 2970 | 100 | Minus |
2L | 23513712 | 2L | 14977214..14977647 | 984..551 | 2170 | 100 | Minus |
2L | 23513712 | 2L | 14992307..14992507 | 358..158 | 1005 | 100 | Minus |
2L | 23513712 | 2L | 14993899..14994035 | 158..22 | 685 | 100 | Minus |
2L | 23513712 | 2L | 14983950..14984084 | 551..417 | 675 | 100 | Minus |
2L | 23513712 | 2L | 14984196..14984256 | 416..356 | 305 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 1043..1190 | 1788..1636 | 178 | 61.5 | Minus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 992..1237 | 1964..1726 | 168 | 57.9 | Minus |
Dyak\HeT-A | 5691 | Dyak\HeT-A YAKHETA 5691bp | 11..98 | 49..134 | 146 | 65.9 | Plus |
Stalker2 | 7672 | Stalker2 STALKER2 7672bp | 1457..1653 | 1686..1883 | 136 | 57.7 | Plus |
Dbif\P-element_M | 2935 | Dbif\P-element_M P_M 2935bp Derived from X60990. | 1960..2101 | 1808..1953 | 123 | 60.1 | Plus |
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 5046..5117 | 1805..1878 | 121 | 66.2 | Plus |
transib4 | 2656 | transib4 TRANSIB4 2656bp | 1934..1972 | 1308..1346 | 114 | 76.9 | Plus |
gypsy6 | 7826 | gypsy6 GYPSY6 7826bp | 504..605 | 1951..1857 | 114 | 62.7 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 14974535..14975140 | 1576..2187 | 95 | <- | Minus |
chr2L | 14975274..14975410 | 1439..1575 | 100 | == | Minus |
chr2L | 14975499..14975865 | 984..1350 | 99 | <- | Minus |
chr2L | 14975998..14976429 | 552..983 | 100 | <- | Minus |
chr2L | 14982736..14982870 | 417..551 | 100 | <- | Minus |
chr2L | 14982982..14983039 | 359..416 | 100 | <- | Minus |
chr2L | 14991093..14991292 | 159..358 | 100 | <- | Minus |
chr2L | 14992686..14992822 | 22..158 | 100 | <- | Minus |
chr2L | 14996301..14996321 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RD | 1..1425 | 194..1618 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RD | 1..1425 | 194..1618 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RC | 1..1425 | 194..1618 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RD | 1..1425 | 194..1618 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RC | 1..1425 | 194..1618 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RA | 21..2207 | 1..2187 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RA | 21..2207 | 1..2187 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RA | 24..2210 | 1..2187 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RA | 21..2207 | 1..2187 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mol-RA | 24..2210 | 1..2187 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14975747..14976358 | 1576..2187 | 100 | <- | Minus |
2L | 14976492..14977083 | 984..1575 | 100 | <- | Minus |
2L | 14977215..14977646 | 552..983 | 100 | <- | Minus |
2L | 14983950..14984084 | 417..551 | 100 | <- | Minus |
2L | 14984196..14984253 | 359..416 | 100 | <- | Minus |
2L | 14992307..14992506 | 159..358 | 100 | <- | Minus |
2L | 14993899..14994035 | 22..158 | 100 | <- | Minus |
2L | 14997516..14997536 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14975747..14976358 | 1576..2187 | 100 | <- | Minus |
2L | 14976492..14977083 | 984..1575 | 100 | <- | Minus |
2L | 14977215..14977646 | 552..983 | 100 | <- | Minus |
2L | 14983950..14984084 | 417..551 | 100 | <- | Minus |
2L | 14984196..14984253 | 359..416 | 100 | <- | Minus |
2L | 14992307..14992506 | 159..358 | 100 | <- | Minus |
2L | 14993899..14994035 | 22..158 | 100 | <- | Minus |
2L | 14997516..14997536 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14975747..14976358 | 1576..2187 | 100 | <- | Minus |
2L | 14976492..14977083 | 984..1575 | 100 | <- | Minus |
2L | 14977215..14977646 | 552..983 | 100 | <- | Minus |
2L | 14983950..14984084 | 417..551 | 100 | <- | Minus |
2L | 14984196..14984253 | 359..416 | 100 | <- | Minus |
2L | 14992307..14992506 | 159..358 | 100 | <- | Minus |
2L | 14993899..14994035 | 22..158 | 100 | <- | Minus |
2L | 14997516..14997536 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 14975747..14976358 | 1576..2187 | 100 | <- | Minus |
arm_2L | 14976492..14977083 | 984..1575 | 100 | <- | Minus |
arm_2L | 14977215..14977646 | 552..983 | 100 | <- | Minus |
arm_2L | 14983950..14984084 | 417..551 | 100 | <- | Minus |
arm_2L | 14984196..14984253 | 359..416 | 100 | <- | Minus |
arm_2L | 14992307..14992506 | 159..358 | 100 | <- | Minus |
arm_2L | 14993899..14994035 | 22..158 | 100 | <- | Minus |
arm_2L | 14997516..14997536 | 1..21 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 14992307..14992506 | 159..358 | 100 | <- | Minus |
2L | 14993899..14994035 | 22..158 | 100 | <- | Minus |
2L | 14997516..14997536 | 1..21 | 100 | Minus | |
2L | 14975747..14976358 | 1576..2187 | 100 | <- | Minus |
2L | 14976492..14977083 | 984..1575 | 100 | <- | Minus |
2L | 14977215..14977646 | 552..983 | 100 | <- | Minus |
2L | 14983950..14984084 | 417..551 | 100 | <- | Minus |
2L | 14984196..14984253 | 359..416 | 100 | <- | Minus |
Translation from 193 to 1617
> LD27791.pep MKGWFDAFRDDGGPTLYSFSNRTPVTGDVSIVAVSVLFATFYVAFLVIFP GVRKQKFTTFSTVTLSLFVGLVILITRLGSAWHVAHATIIAPYKAFSREK LPARIGTHIGLMHVNVTLTAIPIGNWTPPDIDYNERFTWEGANDMSANYR HALQRGLPFPILTVAEYFSLGREGFSWGGQYRAAGYFASIMLWASLASWL LMNLLLIAVPRYGAYMKALTGALLVCTTVGYHCLLPKRPLSIHLEGGRLE FHFGWCYWLVLVAGILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRH VILEESSDVRYRKPRNSRSLEDPPGLGSRILRRLSSKARDLQPGTAPRRD SPAGVSSSGGVENKGFQSDAPKSPWRYPFRRSQQMAQQQHSHPLHQHPLQ QHHQHHQHHHQQQLQFVGGPVVQHPMHHMQRTMSQDSGSSIASAAVQISP LHKHALARMLPNPPVERIRDMDHW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14999-PA | 473 | GF14999-PA | 1..473 | 1..474 | 2461 | 97.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24231-PA | 474 | GG24231-PA | 1..474 | 1..474 | 2502 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10823-PA | 484 | GH10823-PA | 1..484 | 1..474 | 2128 | 90.1 | Plus |
Dgri\GH23374-PA | 145 | GH23374-PA | 1..121 | 1..121 | 634 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mol-PF | 474 | CG4482-PF | 1..474 | 1..474 | 2543 | 100 | Plus |
mol-PD | 474 | CG4482-PD | 1..474 | 1..474 | 2543 | 100 | Plus |
mol-PC | 474 | CG4482-PC | 1..474 | 1..474 | 2543 | 100 | Plus |
mol-PA | 474 | CG4482-PA | 1..474 | 1..474 | 2543 | 100 | Plus |
mol-PG | 330 | CG4482-PG | 1..330 | 145..474 | 1784 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17335-PA | 467 | GI17335-PA | 1..467 | 1..474 | 2120 | 89.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25732-PA | 456 | GL25732-PA | 1..456 | 1..474 | 1987 | 85.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA25410-PA | 483 | GA25410-PA | 1..483 | 1..474 | 2169 | 90.9 | Plus |
Dpse\GA25411-PA | 372 | GA25411-PA | 8..372 | 119..474 | 1552 | 87.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14610-PA | 1263 | GM14610-PA | 1..337 | 1..337 | 1811 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21978-PA | 474 | GD21978-PA | 1..474 | 1..474 | 2521 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16029-PA | 476 | GJ16029-PA | 1..476 | 1..474 | 2165 | 91 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18071-PA | 474 | GK18071-PA | 1..474 | 1..474 | 2204 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24754-PA | 477 | GE24754-PA | 1..477 | 1..474 | 2498 | 98.7 | Plus |
Translation from 193 to 1617
> LD27791.hyp MKGWFDAFRDDGGPTLYSFSNRTPVTGDVSIVAVSVLFATFYVAFLVIFP GVRKQKFTTFSTVTLSLFVGLVILITRLGSAWHVAHATIIAPYKAFSREK LPARIGTHIGLMHVNVTLTAIPIGNWTPPDIDYNERFTWEGANDMSANYR HALQRGLPFPILTVAEYFSLGREGFSWGGQYRAAGYFASIMLWASLASWL LMNLLLIAVPRYGAYMKALTGALLVCTTVGYHCLLPKRPLSIHLEGGRLE FHFGWCYWLVLVAGILCFIAGVLISIIDLVWPHTFSTVLEVYYGTPYDRH VILEESSDVRYRKPRNSRSLEDPPGLGSRILRRLSSKARDLQPGTAPRRD SPAGVSSSGGVENKGFQSDAPKSPWRYPFRRSQQMAQQQHSHPLHQHPLQ QHHQHHQHHHQQQLQFVGGPVVQHPMHHMQRTMSQDSGSSIASAAVQISP LHKHALARMLPNPPVERIRDMDHW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mol-PF | 474 | CG4482-PF | 1..474 | 1..474 | 2543 | 100 | Plus |
mol-PD | 474 | CG4482-PD | 1..474 | 1..474 | 2543 | 100 | Plus |
mol-PC | 474 | CG4482-PC | 1..474 | 1..474 | 2543 | 100 | Plus |
mol-PA | 474 | CG4482-PA | 1..474 | 1..474 | 2543 | 100 | Plus |
mol-PG | 330 | CG4482-PG | 1..330 | 145..474 | 1784 | 100 | Plus |