Clone LD27873 Report

Search the DGRC for LD27873

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:278
Well:73
Vector:pOT2
Associated Gene/TranscriptNab2-RA
Protein status:LD27873.pep: gold
Preliminary Size:3437
Sequenced Size:3511

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5720 2000-02-14 Blastp of sequenced clone
CG5720 2001-01-01 Release 2 assignment
CG5720 2003-01-01 Sim4 clustering to Release 3
CG5720 2008-04-29 Release 5.5 accounting
CG5720 2008-08-15 Release 5.9 accounting
CG5720 2008-12-18 5.12 accounting

Clone Sequence Records

LD27873.complete Sequence

3511 bp (3511 high quality bases) assembled on 2000-02-14

GenBank Submission: AF181655

> LD27873.complete
ACCACTAGTTATGAATATCGGAGCAGCTGCGATTTTTTTTTTTTTTTGGG
AGGTTTTGCCATTTTCTAATGTAACAAAAAGTGGAGTGTAGCCACAAAGT
AAGCGTAAATAATAAATGCTCGCGGCGAATAAACAGCGAAAAAGGCGATA
GATAAACCAGCAAACATGGAGTGCAATCTGGGCAGCGAGATTGGTCAGAA
GATGCGCAGCGCCGTAAAGGCAAAGCTGCTGGAGCTGGGAACCGGAGGAT
CGGCCGGTTTTATAGACGATGAATTGCCGGACTACGTCATGGTCATGGTG
GCCAACAAGCGCACCAAACAGCAGATGAACGCCGAGCTGAATCTATTCCT
AGGCGATCAAACTGACCTCTTTGTCACCTGGCTGCACGAAGTGCTGCAAA
AGCTCCAAGAGGTCACACTCCCCACATCCAGTGCTTCCAGCAAGAAGCGC
AAGTCTCGCGGTCAGGAGAAGGACAAAAAAGGATCCAAGAAGGATAAGCG
ACCGCACCGAAAGTCCGGAGATGAGCTGTCGGAACCACAGCCAAGTTCCT
CAGATGCCATGCCAATTGTCAGTTCCATCACGGATGTTTTTGCCGAAGAG
CTTCTCGAGAAGGCAAAGAAAACCATGGACATTGATCTCAGTGCCAAAGA
CGAGATCCTGCACAAAAAGAAAAATCGCAAGTCCATCGAGGATGAGGATG
CATCGGCCAATAGGGCGCTGGATGTGCCCGCTGTGTCTGAGATCATCTCA
ACTACTATCGGTGTTAACCGGCAAAAAGACCTCGCTGAGCTGGCCGAAAT
CCAAAAGAAAATTCATGCAGCCAAGAAGCATTTACGCCAGATTGGCGAGA
TCGGGGATGAAAGCGATGAATATGATGAGGATCTGTTGAACTTGAGCGCG
AGGGAGGAGTCTGTAGACCAGGAGCCAGAAGAGGATCCCCCGAAATTGGA
GGCTCCACCACGAAAAGCTAAGAGCCCCATTATTTTTAACAGACGCGAGA
AGACACCCGAAAAGCGTCCAGAGGCTGAACCGGAGATCGATTCCCGCCAG
GAGGAGGCGGAGGAGAAGAGCCCCAAAAAAGATTCTTCGGCTGACAAGGC
CAAGGAAGACCGGTCTGAAAGGCGATCGGTGCATGACCGTCTCGGTTCAA
AGGCCCAAACGCCGGCAGATCGTTCGCAGCGCAACCAAAAGGAGCTCTAT
GTGCCGACCCATCGGCGACGGAGCGAACCCGAGGCCACCAAAGAGCGCAG
TCAAAGAGAGCGCACCCGAGAACGACGCTCCAGCCGCGATACCTCTAGGG
ACACTAACCGTAATCAGCGCCAGCGTCGTTCGCCTAGTCCGGAGGCTCCA
AGTACAAAGCAACGCATTGTCTCCCAAGTTATTGTGGCCGTTAACAAGCC
ACCGGAGCCGTCGGACGATGAGGATATGGCCGAAAAGCCAGTCAACTCCG
TTATTAAGGTCAAGCCAAGACCAAATGTTTCTCCCAGACGACAGGCCTGC
AAGAACCTCCTGCTGCGAGCAGTGGCGGACGCGCAGCGTTCCACAATCCT
CGCCAAGACTTCGACACAGAAGGAGGACGAGGATGTGGGCAAGATCATAA
GTTCTCTAGGCAAGCGCAAGTCGGAGGATAAGAATGATCAGATTCGTAAA
CGGAATCGCGAGAGGAAACGAAGAAAGAGAAGTGCACAAGGCAACGAACT
CTTCCGGCGCACCACTCGGGAATTAGTGGTAAATGTGACACAAAGGGATG
GAAAGCGTGAACGGCGGTCCAACGAGCGTCGCGCCGAGATCAAAGTGGTG
GAGGAAGAATATACGCCAAGCCTAATGACTGAGGGCGTCGAGACGTATGT
GCCGCAATTGCTGACCAACGTGGATGAATTGGATTTGCACATCAGCTCCC
ACGACGAGCCAAGTCCCAATTCCGGAGCCCTCAAGACTCAGTTTGTGGTC
ACGTTAAACGGCGACAAAGCTCTCGGAGGTAAGAATGTCAAGGGAGGGGC
CTCTCGCAAGCGGCCGAGCAACTCTCGTAAACGATCCACCTCACCCGTAT
CCACGCCACAAGTGTCCTCCTCTAATATTGAGCCCACATCTACGACGGTT
GACAAGCGACGCCGATCCAATCGGGATAGAAGCTTCTCGCCATCGCCGAG
ACAGAGCAGTGGGTCACCCTCCCTGCCGACAACACGCAGCATCAATCGCA
ACGAGGTACGCCGTCAGCCTCAGGAAATCAAGAAGATCATCATAAAAAAT
GACACCGATGAAGATGATGAAATGCACGGGTCACCGAAGAAACGATCACC
AAACAAGCGCCAGCCAGCGGCGGCCAATGGTCACAAGGACAATAAGGATA
AGGGTAAAATCGAGGAAGGCTCAACAACTCCACCGCTGCCAGCCAAACCA
AAGGCGCGGGCGGAGAAGAAAGCTTCCAGCAAGGAGAAATCCGTAAGATC
TAATTCAGCGGAGACGTCATCGGCCGCCAAATCTGTCAGTGCGTCCACTT
CCGTTTCGACAACTACCAAAGCCAAGCACACGCCCATTCGCTTCACTCTT
AAAAGTGAGGACGAGCCGAGTGCGAGTAAGAAGCGTCGTTCTGGCAGCCC
CGATCGTGATGTCGCGGCTCCGGAGAGACGCAGGGTATCCATACGCAATC
CGGAGGACAGGAAATACGACAACTTGCCGGCGTTGAGCGCAGTTAGCGTG
GATTCCACCGTGCTGAAGGTGAACAAACCCAAGGAGCGCTGCAAATATCA
TCCAAACTGCACAAAGCAGTTCTGTGAGTACTATCATCCAACGGCGCCGT
GCAAGTCTTTCCCCAACTGCAAATTCGCGGACAAGTGCATGTACTCGCAT
CCGAAGTGCAAATTCGACATGGCCTGCATGAGCATAGACTGCAACTACGC
CCATGGCGGTCAAAGGGATCTAAGCCATGTCCAGCTTGCTGCTCCACCAC
TATCCTCTCACGTCATCCCAGTGCAGAACTACAAGTCGATATCGGCTCCT
GTTACATCCACGACTGCGACTACCATGTGCAAGTACTATCCGAATTGTTC
CAAGCTGGGCTGCACCTTCTATCATCCCAAGCCCTGCCGCTTCGGCAAGA
ACTGCGTAAACAAGCTGGAGTGCATCTTCTACCATCCTGAGATGCAGAGC
AAATTCAAGTGGGTGGCATCTTTGGGCTAATGTGGACTGCACTTTCGTTC
AAATGATATTTAGCAAATGTACTCTATTTCGAGTGTATGATTAGGCGAGC
TTGGAGTTTTTTCTATCTATATACACCGAGTTGTATACCTTACCTATTTA
ATCTTCATTATTATTTGCATTCATCCTACTGCTTATAATTATAAACATGT
GTATTAGTCATTAGAAGCTCGCTCACATACATGATAAACATAACTTAACT
TTGTTGGTCCTGCGAATTTGGTTGCATTCAAACCATAAGATACACGTCAT
GGTAAAGCTGACGAATAAATTTAGCAATAGTTGCTACAAATGAAAAAAAA
AAAAAAAAAAA

LD27873.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG5720-RA 3570 CG5720-RA 45..3547 1..3504 17450 99.9 Plus
CG5720.a 3482 CG5720.a 1..2688 1..2689 13375 99.8 Plus
CG5720.a 3482 CG5720.a 2683..3482 2693..3492 4000 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:25:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20138942..20141192 2683..433 11240 100 Minus
chr3R 27901430 chr3R 20138010..20138548 3492..2954 2695 100 Minus
chr3R 27901430 chr3R 20138610..20138879 2953..2684 1350 100 Minus
chr3R 27901430 chr3R 20141246..20141471 433..208 1130 100 Minus
chr3R 27901430 chr3R 20141566..20141771 207..1 970 99 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:20:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 24315592..24317842 2683..433 11255 100 Minus
3R 32079331 3R 24314648..24315198 3504..2954 2740 99.8 Minus
3R 32079331 3R 24315260..24315529 2953..2684 1350 100 Minus
3R 32079331 3R 24317896..24318121 433..208 1130 100 Minus
3R 32079331 3R 24318215..24318420 207..1 970 99 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:03:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 24056423..24058673 2683..433 11255 100 Minus
3R 31820162 3R 24055479..24056029 3504..2954 2740 99.8 Minus
3R 31820162 3R 24056091..24056360 2953..2684 1350 100 Minus
3R 31820162 3R 24058727..24058952 433..208 1130 100 Minus
3R 31820162 3R 24059046..24059251 207..1 980 99 Minus
Blast to na_te.dros performed 2019-03-15 22:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
Idefix 7411 Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). 4123..4204 89..166 129 67.1 Plus
TART-C 11124 TART-C TARTC 11124bp 2538..2601 2322..2391 119 70 Plus

LD27873.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:26:30 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20138010..20138548 2954..3492 100 <- Minus
chr3R 20138610..20138879 2684..2953 100 <- Minus
chr3R 20138942..20141191 434..2683 99 <- Minus
chr3R 20141246..20141471 208..433 100 <- Minus
chr3R 20141566..20141771 1..207 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:07:25 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
CG5720-RA 1..3015 166..3180 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:35:20 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
CG5720-RA 1..3015 166..3180 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:19:14 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
Nab2-RA 1..3015 166..3180 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:11:10 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
CG5720-RA 1..3015 166..3180 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:22:06 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
Nab2-RA 1..3015 166..3180 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:38:08 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
CG5720-RA 1..3491 1..3492 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:35:19 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
CG5720-RA 1..3491 1..3492 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:19:14 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
Nab2-RA 1..3490 2..3492 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:11:10 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
CG5720-RA 1..3491 1..3492 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:22:06 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
Nab2-RA 1..3490 2..3492 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:26:30 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24314660..24315198 2954..3492 100 <- Minus
3R 24315260..24315529 2684..2953 100 <- Minus
3R 24315592..24317841 434..2683 100 <- Minus
3R 24317896..24318121 208..433 100 <- Minus
3R 24318215..24318420 1..207 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:26:30 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24314660..24315198 2954..3492 100 <- Minus
3R 24315260..24315529 2684..2953 100 <- Minus
3R 24315592..24317841 434..2683 100 <- Minus
3R 24317896..24318121 208..433 100 <- Minus
3R 24318215..24318420 1..207 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:26:30 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24314660..24315198 2954..3492 100 <- Minus
3R 24315260..24315529 2684..2953 100 <- Minus
3R 24315592..24317841 434..2683 100 <- Minus
3R 24317896..24318121 208..433 100 <- Minus
3R 24318215..24318420 1..207 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:19:14 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20140382..20140920 2954..3492 100 <- Minus
arm_3R 20140982..20141251 2684..2953 100 <- Minus
arm_3R 20141314..20143563 434..2683 100 <- Minus
arm_3R 20143618..20143843 208..433 100 <- Minus
arm_3R 20143937..20144142 1..207 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:47:36 Download gff for LD27873.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24059046..24059251 1..207 99   Minus
3R 24055491..24056029 2954..3492 100 <- Minus
3R 24056091..24056360 2684..2953 100 <- Minus
3R 24056423..24058672 434..2683 100 <- Minus
3R 24058727..24058952 208..433 100 <- Minus

LD27873.pep Sequence

Translation from 165 to 3179

> LD27873.pep
MECNLGSEIGQKMRSAVKAKLLELGTGGSAGFIDDELPDYVMVMVANKRT
KQQMNAELNLFLGDQTDLFVTWLHEVLQKLQEVTLPTSSASSKKRKSRGQ
EKDKKGSKKDKRPHRKSGDELSEPQPSSSDAMPIVSSITDVFAEELLEKA
KKTMDIDLSAKDEILHKKKNRKSIEDEDASANRALDVPAVSEIISTTIGV
NRQKDLAELAEIQKKIHAAKKHLRQIGEIGDESDEYDEDLLNLSAREESV
DQEPEEDPPKLEAPPRKAKSPIIFNRREKTPEKRPEAEPEIDSRQEEAEE
KSPKKDSSADKAKEDRSERRSVHDRLGSKAQTPADRSQRNQKELYVPTHR
RRSEPEATKERSQRERTRERRSSRDTSRDTNRNQRQRRSPSPEAPSTKQR
IVSQVIVAVNKPPEPSDDEDMAEKPVNSVIKVKPRPNVSPRRQACKNLLL
RAVADAQRSTILAKTSTQKEDEDVGKIISSLGKRKSEDKNDQIRKRNRER
KRRKRSAQGNELFRRTTRELVVNVTQRDGKRERRSNERRAEIKVVEEEYT
PSLMTEGVETYVPQLLTNVDELDLHISSHDEPSPNSGALKTQFVVTLNGD
KALGGKNVKGGASRKRPSNSRKRSTSPVSTPQVSSSNIEPTSTTVDKRRR
SNRDRSFSPSPRQSSGSPSLPTTRSINRNEVRRQPQEIKKIIIKNDTDED
DEMHGSPKKRSPNKRQPAAANGHKDNKDKGKIEEGSTTPPLPAKPKARAE
KKASSKEKSVRSNSAETSSAAKSVSASTSVSTTTKAKHTPIRFTLKSEDE
PSASKKRRSGSPDRDVAAPERRRVSIRNPEDRKYDNLPALSAVSVDSTVL
KVNKPKERCKYHPNCTKQFCEYYHPTAPCKSFPNCKFADKCMYSHPKCKF
DMACMSIDCNYAHGGQRDLSHVQLAAPPLSSHVIPVQNYKSISAPVTSTT
ATTMCKYYPNCSKLGCTFYHPKPCRFGKNCVNKLECIFYHPEMQSKFKWV
ASLG*

LD27873.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:50:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20725-PA 990 GF20725-PA 1..990 1..1004 3424 71.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:50:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12356-PA 1018 GG12356-PA 1..1018 1..1004 4386 91.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:50:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18800-PA 1077 GH18800-PA 1..1077 1..1004 2536 56.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:13
Subject Length Description Subject Range Query Range Score Percent Strand
Nab2-PA 1004 CG5720-PA 1..1004 1..1004 5164 100 Plus
CG7971-PG 1062 CG7971-PG 226..827 167..830 237 19.6 Plus
CG7971-PA 1062 CG7971-PA 226..827 167..830 237 19.6 Plus
CG7971-PC 1107 CG7971-PC 226..827 167..830 237 19.6 Plus
CG7971-PF 1655 CG7971-PF 451..1052 167..830 237 19.6 Plus
CG7971-PG 1062 CG7971-PG 165..942 11..853 222 20.4 Plus
CG7971-PA 1062 CG7971-PA 165..942 11..853 222 20.4 Plus
CG7971-PC 1107 CG7971-PC 165..942 11..853 222 20.4 Plus
CG7971-PF 1655 CG7971-PF 390..1101 11..766 214 20.6 Plus
futsch-PF 5495 CG34387-PF 3134..3935 81..832 206 20.2 Plus
futsch-PE 5495 CG34387-PE 3134..3935 81..832 206 20.2 Plus
futsch-PC 5495 CG34387-PC 3134..3935 81..832 206 20.2 Plus
CG7971-PG 1062 CG7971-PG 27..689 112..824 205 18.1 Plus
CG7971-PA 1062 CG7971-PA 27..689 112..824 205 18.1 Plus
CG7971-PC 1107 CG7971-PC 27..689 112..824 205 18.1 Plus
Strn-Mlck-PT 7905 CG44162-PT 3661..4413 75..833 199 19.1 Plus
Strn-Mlck-PV 7944 CG44162-PV 3700..4452 75..833 199 19.1 Plus
Strn-Mlck-PS 8216 CG44162-PS 3661..4413 75..833 199 19.1 Plus
Strn-Mlck-PU 8255 CG44162-PU 3700..4452 75..833 199 19.1 Plus
CG14692-PE 2851 CG14692-PE 699..1409 105..860 193 19.9 Plus
Strn-Mlck-PT 7905 CG44162-PT 4311..5084 75..854 192 18.4 Plus
Strn-Mlck-PV 7944 CG44162-PV 4350..5123 75..854 192 18.4 Plus
Strn-Mlck-PS 8216 CG44162-PS 4311..5084 75..854 192 18.4 Plus
Strn-Mlck-PU 8255 CG44162-PU 4350..5123 75..854 192 18.4 Plus
CG7971-PF 1655 CG7971-PF 323..914 191..824 191 18.1 Plus
CG2839-PA 826 CG2839-PA 252..728 61..548 190 19.2 Plus
Strn-Mlck-PT 7905 CG44162-PT 4364..5182 75..839 189 18.6 Plus
Strn-Mlck-PV 7944 CG44162-PV 4403..5221 75..839 189 18.6 Plus
Strn-Mlck-PS 8216 CG44162-PS 4364..5182 75..839 189 18.6 Plus
Strn-Mlck-PU 8255 CG44162-PU 4403..5221 75..839 189 18.6 Plus
Cwc25-PA 521 CG2843-PA 150..501 171..498 188 23.9 Plus
futsch-PF 5495 CG34387-PF 2893..3646 86..858 186 19.7 Plus
futsch-PE 5495 CG34387-PE 2893..3646 86..858 186 19.7 Plus
futsch-PC 5495 CG34387-PC 2893..3646 86..858 186 19.7 Plus
CG2839-PA 826 CG2839-PA 295..738 93..547 186 20 Plus
Strn-Mlck-PT 7905 CG44162-PT 3479..4202 90..805 177 18.1 Plus
Strn-Mlck-PV 7944 CG44162-PV 3518..4241 90..805 177 18.1 Plus
Strn-Mlck-PS 8216 CG44162-PS 3479..4202 90..805 177 18.1 Plus
Strn-Mlck-PU 8255 CG44162-PU 3518..4241 90..805 177 18.1 Plus
CG2839-PA 826 CG2839-PA 362..759 93..537 176 19.3 Plus
CG2839-PA 826 CG2839-PA 337..742 93..539 175 18.6 Plus
Muc30E-PC 1702 CG33300-PC 576..1142 244..833 175 19.9 Plus
futsch-PF 5495 CG34387-PF 1835..2599 78..855 174 18.6 Plus
futsch-PE 5495 CG34387-PE 1835..2599 78..855 174 18.6 Plus
futsch-PC 5495 CG34387-PC 1835..2599 78..855 174 18.6 Plus
dikar-PG 3080 CG42799-PG 902..1576 203..857 174 19.4 Plus
dikar-PC 3080 CG42799-PC 902..1576 203..857 174 19.4 Plus
dikar-PD 3222 CG42799-PD 1044..1718 203..857 174 19.4 Plus
dikar-PF 3261 CG42799-PF 1044..1718 203..857 174 19.4 Plus
Strn-Mlck-PT 7905 CG44162-PT 3461..4153 140..833 171 18.8 Plus
Strn-Mlck-PV 7944 CG44162-PV 3500..4192 140..833 171 18.8 Plus
Strn-Mlck-PS 8216 CG44162-PS 3461..4153 140..833 171 18.8 Plus
Strn-Mlck-PU 8255 CG44162-PU 3500..4192 140..833 171 18.8 Plus
futsch-PF 5495 CG34387-PF 1327..2092 92..858 168 19.4 Plus
futsch-PE 5495 CG34387-PE 1327..2092 92..858 168 19.4 Plus
futsch-PC 5495 CG34387-PC 1327..2092 92..858 168 19.4 Plus
Caf1-180-PB 1183 CG12109-PB 178..586 82..548 167 22.1 Plus
futsch-PF 5495 CG34387-PF 3547..4225 81..780 166 21.4 Plus
futsch-PE 5495 CG34387-PE 3547..4225 81..780 166 21.4 Plus
futsch-PC 5495 CG34387-PC 3547..4225 81..780 166 21.4 Plus
rudhira-PE 2075 CG43154-PE 1189..1640 79..548 165 18.1 Plus
rudhira-PC 2075 CG43154-PC 1189..1640 79..548 165 18.1 Plus
Strn-Mlck-PT 7905 CG44162-PT 3364..4023 127..833 162 18.1 Plus
Strn-Mlck-PV 7944 CG44162-PV 3403..4062 127..833 162 18.1 Plus
Strn-Mlck-PS 8216 CG44162-PS 3364..4023 127..833 162 18.1 Plus
Strn-Mlck-PU 8255 CG44162-PU 3403..4062 127..833 162 18.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:50:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22690-PA 1016 GI22690-PA 1..1016 1..1004 2552 55.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21991-PA 1046 GL21991-PA 1..1046 1..1004 3069 66.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:50:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19083-PA 1046 GA19083-PA 1..1046 1..1004 3060 66.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:50:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23495-PA 1009 GM23495-PA 1..1009 1..1004 4739 94.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:50:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18302-PA 1008 GD18302-PA 1..1008 1..1004 4714 94.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:50:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23417-PA 1054 GJ23417-PA 1..1054 1..1004 2625 58.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:50:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13971-PA 633 GK13971-PA 291..633 673..1004 1148 66.5 Plus
Dwil\GK13971-PA 633 GK13971-PA 1..238 1..230 714 71.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:50:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10810-PA 1018 GE10810-PA 1..1018 1..1004 4395 91.6 Plus

LD27873.hyp Sequence

Translation from 165 to 3179

> LD27873.hyp
MECNLGSEIGQKMRSAVKAKLLELGTGGSAGFIDDELPDYVMVMVANKRT
KQQMNAELNLFLGDQTDLFVTWLHEVLQKLQEVTLPTSSASSKKRKSRGQ
EKDKKGSKKDKRPHRKSGDELSEPQPSSSDAMPIVSSITDVFAEELLEKA
KKTMDIDLSAKDEILHKKKNRKSIEDEDASANRALDVPAVSEIISTTIGV
NRQKDLAELAEIQKKIHAAKKHLRQIGEIGDESDEYDEDLLNLSAREESV
DQEPEEDPPKLEAPPRKAKSPIIFNRREKTPEKRPEAEPEIDSRQEEAEE
KSPKKDSSADKAKEDRSERRSVHDRLGSKAQTPADRSQRNQKELYVPTHR
RRSEPEATKERSQRERTRERRSSRDTSRDTNRNQRQRRSPSPEAPSTKQR
IVSQVIVAVNKPPEPSDDEDMAEKPVNSVIKVKPRPNVSPRRQACKNLLL
RAVADAQRSTILAKTSTQKEDEDVGKIISSLGKRKSEDKNDQIRKRNRER
KRRKRSAQGNELFRRTTRELVVNVTQRDGKRERRSNERRAEIKVVEEEYT
PSLMTEGVETYVPQLLTNVDELDLHISSHDEPSPNSGALKTQFVVTLNGD
KALGGKNVKGGASRKRPSNSRKRSTSPVSTPQVSSSNIEPTSTTVDKRRR
SNRDRSFSPSPRQSSGSPSLPTTRSINRNEVRRQPQEIKKIIIKNDTDED
DEMHGSPKKRSPNKRQPAAANGHKDNKDKGKIEEGSTTPPLPAKPKARAE
KKASSKEKSVRSNSAETSSAAKSVSASTSVSTTTKAKHTPIRFTLKSEDE
PSASKKRRSGSPDRDVAAPERRRVSIRNPEDRKYDNLPALSAVSVDSTVL
KVNKPKERCKYHPNCTKQFCEYYHPTAPCKSFPNCKFADKCMYSHPKCKF
DMACMSIDCNYAHGGQRDLSHVQLAAPPLSSHVIPVQNYKSISAPVTSTT
ATTMCKYYPNCSKLGCTFYHPKPCRFGKNCVNKLECIFYHPEMQSKFKWV
ASLG*

LD27873.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:23:59
Subject Length Description Subject Range Query Range Score Percent Strand
Nab2-PA 1004 CG5720-PA 1..1004 1..1004 5164 100 Plus
CG7971-PG 1062 CG7971-PG 226..827 167..830 237 19.6 Plus
CG7971-PA 1062 CG7971-PA 226..827 167..830 237 19.6 Plus
CG7971-PC 1107 CG7971-PC 226..827 167..830 237 19.6 Plus
CG7971-PF 1655 CG7971-PF 451..1052 167..830 237 19.6 Plus
CG7971-PG 1062 CG7971-PG 165..942 11..853 222 20.4 Plus
CG7971-PA 1062 CG7971-PA 165..942 11..853 222 20.4 Plus
CG7971-PC 1107 CG7971-PC 165..942 11..853 222 20.4 Plus
CG7971-PG 1062 CG7971-PG 27..689 112..824 205 18.1 Plus
CG7971-PA 1062 CG7971-PA 27..689 112..824 205 18.1 Plus
CG7971-PC 1107 CG7971-PC 27..689 112..824 205 18.1 Plus