BDGP Sequence Production Resources |
Search the DGRC for LD27878
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 278 |
Well: | 78 |
Vector: | pOT2 |
Associated Gene/Transcript | Ac3-RC |
Protein status: | LD27878.pep: gold |
Preliminary Size: | 1908 |
Sequenced Size: | 1870 |
Gene | Date | Evidence |
---|---|---|
CG1506 | 2001-01-01 | Release 2 assignment |
CG1506 | 2001-10-10 | Blastp of sequenced clone |
CG1506 | 2003-01-01 | Sim4 clustering to Release 3 |
Ac3 | 2008-04-29 | Release 5.5 accounting |
Ac3 | 2008-08-15 | Release 5.9 accounting |
Ac3 | 2008-12-18 | 5.12 accounting |
1870 bp (1870 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061347
> LD27878.complete TTATGTTCTTGTCACATTACAAACAAATAAACCAAGGACATGGTGTCGCT TTATTACTAAACCACAAATACGAAATAAGCTCTCCGAACAACGAATAACA TCCTAGAAGTTAGACAAACGAGATGGAAGCAAATTTGGAGAACGGTCAGA AAACGATCGCCTCGACAAGCAAATCGCATTCGCAGCGTCAAACAACATCT CGACGGCGGCAAAACGACAGCGATGTGGCCGGAGGCGTGGGAATCACCGG TGGGGGAGTCGTCATTTTGCCGCAGCACGTGCTTAACGAACTCTACCACA ACTACTCCATCAAACAACGCCGCAGTGGATTGAAGTGGTTTGTCTTTGCG GCCGCGTTGTTTAACATATGGACCATCGGAATTCCCTGGGATCAGTCGGC CCCTACGAGAGTGATCAACTGTTGTATGCTGTTAGCTTACTTGGCATTGA CAGCGCTCCTTCATATTGGACGCCGTTCTGATAAACCGGCACTGAGGCGC TTCCACCAAATACTCCTGATTATTGTGCCACGGGCACTGTGGCTATTAAG CATTCTTCATTTTACCGTTTATGTTATTCTGCAGCCTAGTTTTTCTCCAA GGGACCTACTTGGCTGGGCCATCCTTCTAAATTTCTTGGTCTATGTGACG CTGCCATTACAGCTGATTTTTCTTGGTCTGTCGATTGGATGTATCACATA TTTCATTTGCCTCAGTCTCCCTGTTGGTTATTCTCACTGGGACTCGCTGC TCTCGAACCAATTAGCGGCTAATGCAGTTTTGATAGCCACGGCAGCGCTG ATAGGCCTTTTGTACTACTTTATGGGTGAGGCCAAGCAGAAACGAGCCTT TCTCGAGGCCAAAAAGAGCCTTGAAGTTAAAATGGTCATAGAGGAACAGT CGGCCGAACAGGAGCGTCTGCTATTGTCTGTGCTGCCAAAGCATGTGGCT ATTAAGATGCGGGAAGATTTGGGATCATCCAGTTCCGAGGCTTTTAAAAA AATTTACATGAGTCGGCACGAGAATGTAAGAAATATCAACAATTGCGCAT TAAGATTCTTGGCGATTGCTACTACTGTATTAGCGGTGCCCCTGATGAGC GTCCAGATCACGCCGTCCTGTGTGTGCACATGGGACTCTCCATGGTGAAG GCCATTAAGTATGTGCAGCAGAAGGCCAACTCACCTGTTGACATGCGAGT AGGCATTCACACTGGAGCCGTGCTCGCTGGAATTCTTGGGCAGCGACAGT GGCAGTTTGATGTTTACTCTAAGGACGTAGAGCTGGCTAATAAAATGGAA TCGAGCGGAAAGGCTGGACGCGTTCACATTTCGGACAAAACGCTTGCCTT TCTGAACGGCGAATTCGAAGTGGAGGCCGCCTTTGGAGAGAAACGAGAGG AGTTGTTGCGTATTGCTGGGCTAAAGACGTATTTTATCACCAAAGTAGTT AAAGCGTTTGCATCGCCATGTGCCAAAAAAATAAATGAAACCCAGGCTGA AATTGCACACCCCAATCCTAATGGATCGACGACCGATATTGTATCAGATG AAGATGACAACGATGCCACATTAGACGACGAAGAGCTCCTGGCGCAGAAT TCTGTATCCAATGGACACCAAATAGGGATTGCAGTGACTGCAGATGAAGA GGAGCAGGTGAAATTGGAGAACTTTAAACAACGACTGAAAGATGAGCTGG TAACGCGCGACGGACATGAGTAAGCAAATATTTGCTATATATATCGTATA TCGTATATATAGTACATGTTACTATAGCGTAACATACTTTAGCACATTAC GAATAAAGTAATTTGACGAAATATATTGGAGAAACTAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ac3-RC | 2275 | Ac3-RC | 166..2006 | 1..1841 | 9205 | 100 | Plus |
Ac3-RA | 5220 | Ac3-RA | 453..1482 | 1..1030 | 5150 | 100 | Plus |
Ac3.a | 5463 | Ac3.a | 696..1725 | 1..1030 | 5150 | 100 | Plus |
Ac3-RA | 5220 | Ac3-RA | 1593..2283 | 1029..1719 | 3455 | 100 | Plus |
Ac3.a | 5463 | Ac3.a | 1836..2526 | 1029..1719 | 3455 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 21632009..21632419 | 1..411 | 2055 | 100 | Plus |
chr2L | 23010047 | chr2L | 21637745..21638125 | 1456..1836 | 1905 | 100 | Plus |
chr2L | 23010047 | chr2L | 21633229..21633541 | 600..912 | 1565 | 100 | Plus |
chr2L | 23010047 | chr2L | 21632923..21633115 | 410..602 | 965 | 100 | Plus |
chr2L | 23010047 | chr2L | 21636463..21636621 | 1159..1317 | 795 | 100 | Plus |
chr2L | 23010047 | chr2L | 21636734..21636873 | 1317..1456 | 700 | 100 | Plus |
chr2L | 23010047 | chr2L | 21636162..21636294 | 1029..1161 | 665 | 100 | Plus |
chr2L | 23010047 | chr2L | 21633595..21633715 | 910..1030 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21633505..21633915 | 1..411 | 2055 | 100 | Plus |
2L | 23513712 | 2L | 21639240..21639625 | 1456..1841 | 1930 | 100 | Plus |
2L | 23513712 | 2L | 21634724..21635036 | 600..912 | 1565 | 100 | Plus |
2L | 23513712 | 2L | 21634418..21634610 | 410..602 | 965 | 100 | Plus |
2L | 23513712 | 2L | 21637958..21638116 | 1159..1317 | 795 | 100 | Plus |
2L | 23513712 | 2L | 21638229..21638368 | 1317..1456 | 700 | 100 | Plus |
2L | 23513712 | 2L | 21637657..21637789 | 1029..1161 | 665 | 100 | Plus |
2L | 23513712 | 2L | 21635090..21635210 | 910..1030 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 21633505..21633915 | 1..411 | 2055 | 100 | Plus |
2L | 23513712 | 2L | 21639240..21639625 | 1456..1841 | 1930 | 100 | Plus |
2L | 23513712 | 2L | 21634724..21635036 | 600..912 | 1565 | 100 | Plus |
2L | 23513712 | 2L | 21634418..21634610 | 410..602 | 965 | 100 | Plus |
2L | 23513712 | 2L | 21637958..21638116 | 1159..1317 | 795 | 100 | Plus |
2L | 23513712 | 2L | 21638229..21638368 | 1317..1456 | 700 | 100 | Plus |
2L | 23513712 | 2L | 21637657..21637789 | 1029..1161 | 665 | 100 | Plus |
2L | 23513712 | 2L | 21635090..21635210 | 910..1030 | 605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 21632009..21632419 | 1..411 | 100 | -> | Plus |
chr2L | 21632925..21633114 | 412..601 | 100 | -> | Plus |
chr2L | 21633231..21633540 | 602..911 | 100 | -> | Plus |
chr2L | 21633597..21633715 | 912..1030 | 100 | -> | Plus |
chr2L | 21636164..21636291 | 1031..1158 | 100 | -> | Plus |
chr2L | 21636463..21636621 | 1159..1317 | 100 | -> | Plus |
chr2L | 21636735..21636873 | 1318..1456 | 100 | -> | Plus |
chr2L | 21637746..21638125 | 1457..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 1..1026 | 123..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 1..1026 | 123..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 1..1026 | 123..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 1..1026 | 123..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 1..1026 | 123..1148 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 1..1836 | 1..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 1..1836 | 1..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 291..2126 | 1..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 1..1836 | 1..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ac3-RC | 291..2126 | 1..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21633505..21633915 | 1..411 | 100 | -> | Plus |
2L | 21634420..21634609 | 412..601 | 100 | -> | Plus |
2L | 21634726..21635035 | 602..911 | 100 | -> | Plus |
2L | 21635092..21635210 | 912..1030 | 100 | -> | Plus |
2L | 21637659..21637786 | 1031..1158 | 100 | -> | Plus |
2L | 21637958..21638116 | 1159..1317 | 100 | -> | Plus |
2L | 21638230..21638368 | 1318..1456 | 100 | -> | Plus |
2L | 21639241..21639620 | 1457..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21633505..21633915 | 1..411 | 100 | -> | Plus |
2L | 21634420..21634609 | 412..601 | 100 | -> | Plus |
2L | 21634726..21635035 | 602..911 | 100 | -> | Plus |
2L | 21635092..21635210 | 912..1030 | 100 | -> | Plus |
2L | 21637659..21637786 | 1031..1158 | 100 | -> | Plus |
2L | 21637958..21638116 | 1159..1317 | 100 | -> | Plus |
2L | 21638230..21638368 | 1318..1456 | 100 | -> | Plus |
2L | 21639241..21639620 | 1457..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21633505..21633915 | 1..411 | 100 | -> | Plus |
2L | 21634420..21634609 | 412..601 | 100 | -> | Plus |
2L | 21634726..21635035 | 602..911 | 100 | -> | Plus |
2L | 21635092..21635210 | 912..1030 | 100 | -> | Plus |
2L | 21637659..21637786 | 1031..1158 | 100 | -> | Plus |
2L | 21637958..21638116 | 1159..1317 | 100 | -> | Plus |
2L | 21638230..21638368 | 1318..1456 | 100 | -> | Plus |
2L | 21639241..21639620 | 1457..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 21634420..21634609 | 412..601 | 100 | -> | Plus |
arm_2L | 21633505..21633915 | 1..411 | 100 | -> | Plus |
arm_2L | 21634726..21635035 | 602..911 | 100 | -> | Plus |
arm_2L | 21635092..21635210 | 912..1030 | 100 | -> | Plus |
arm_2L | 21637659..21637786 | 1031..1158 | 100 | -> | Plus |
arm_2L | 21637958..21638116 | 1159..1317 | 100 | -> | Plus |
arm_2L | 21638230..21638368 | 1318..1456 | 100 | -> | Plus |
arm_2L | 21639241..21639620 | 1457..1836 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 21637659..21637786 | 1031..1158 | 100 | -> | Plus |
2L | 21637958..21638116 | 1159..1317 | 100 | -> | Plus |
2L | 21638230..21638368 | 1318..1456 | 100 | -> | Plus |
2L | 21639241..21639620 | 1457..1836 | 100 | Plus | |
2L | 21633505..21633915 | 1..411 | 100 | -> | Plus |
2L | 21634420..21634609 | 412..601 | 100 | -> | Plus |
2L | 21634726..21635035 | 602..911 | 100 | -> | Plus |
2L | 21635092..21635210 | 912..1030 | 100 | -> | Plus |
Translation from 122 to 1147
> LD27878.pep MEANLENGQKTIASTSKSHSQRQTTSRRRQNDSDVAGGVGITGGGVVILP QHVLNELYHNYSIKQRRSGLKWFVFAAALFNIWTIGIPWDQSAPTRVINC CMLLAYLALTALLHIGRRSDKPALRRFHQILLIIVPRALWLLSILHFTVY VILQPSFSPRDLLGWAILLNFLVYVTLPLQLIFLGLSIGCITYFICLSLP VGYSHWDSLLSNQLAANAVLIATAALIGLLYYFMGEAKQKRAFLEAKKSL EVKMVIEEQSAEQERLLLSVLPKHVAIKMREDLGSSSSEAFKKIYMSRHE NVRNINNCALRFLAIATTVLAVPLMSVQITPSCVCTWDSPW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15486-PA | 1177 | GF15486-PA | 8..337 | 4..327 | 1207 | 77 | Plus |
Dana\GF10525-PA | 1632 | GF10525-PA | 340..521 | 121..302 | 215 | 30.3 | Plus |
Dana\GF21594-PA | 2285 | GF21594-PA | 192..329 | 167..302 | 210 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21341-PA | 1167 | GG21341-PA | 1..327 | 1..327 | 1473 | 89.9 | Plus |
Dere\GG19448-PA | 2224 | GG19448-PA | 137..274 | 167..302 | 207 | 36 | Plus |
Dere\GG15877-PA | 1270 | GG15877-PA | 72..151 | 224..302 | 187 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10783-PA | 1173 | GH10783-PA | 7..336 | 3..327 | 1225 | 75.8 | Plus |
Dgri\GH12957-PA | 749 | GH12957-PA | 137..274 | 167..302 | 212 | 35.7 | Plus |
Dgri\GH12212-PA | 2191 | GH12212-PA | 137..274 | 167..302 | 210 | 33.6 | Plus |
Dgri\GH15584-PA | 1341 | GH15584-PA | 32..229 | 121..302 | 198 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ac3-PC | 341 | CG1506-PC | 1..341 | 1..341 | 1748 | 100 | Plus |
Ac3-PA | 1167 | CG1506-PA | 1..327 | 1..327 | 1549 | 94.2 | Plus |
CG43373-PB | 1240 | CG42513-PB | 547..730 | 121..302 | 225 | 32.3 | Plus |
CG43373-PC | 1854 | CG42513-PA | 547..730 | 121..302 | 225 | 32.3 | Plus |
rut-PE | 1391 | CG9533-PE | 137..274 | 167..302 | 207 | 36 | Plus |
rut-PF | 1507 | CG9533-PF | 137..274 | 167..302 | 207 | 36 | Plus |
rut-PB | 2055 | CG9533-PB | 137..274 | 167..302 | 207 | 36 | Plus |
rut-PC | 2146 | CG9533-PC | 137..274 | 167..302 | 207 | 36 | Plus |
rut-PD | 2171 | CG9533-PD | 137..274 | 167..302 | 207 | 36 | Plus |
rut-PG | 2171 | CG9533-PG | 137..274 | 167..302 | 207 | 36 | Plus |
rut-PA | 2248 | CG9533-PA | 137..274 | 167..302 | 207 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17441-PA | 1170 | GI17441-PA | 7..333 | 3..327 | 1140 | 75.8 | Plus |
Dmoj\GI16861-PA | 1685 | GI16861-PA | 381..564 | 121..302 | 207 | 30.5 | Plus |
Dmoj\GI15743-PA | 2231 | GI15743-PA | 137..274 | 167..302 | 205 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25795-PA | 1194 | GL25795-PA | 11..345 | 4..327 | 1240 | 74 | Plus |
Dper\GL20407-PA | 2229 | GL20407-PA | 82..219 | 167..302 | 208 | 36 | Plus |
Dper\GL17987-PA | 999 | GL17987-PA | 13..90 | 226..302 | 182 | 42.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13464-PA | 1194 | GA13464-PA | 11..345 | 4..327 | 1236 | 73.7 | Plus |
Dpse\GA28358-PA | 1718 | GA28358-PA | 402..584 | 121..302 | 218 | 32.1 | Plus |
Dpse\GA29217-PA | 1554 | GA29217-PA | 137..274 | 167..302 | 210 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16140-PA | 1165 | GM16140-PA | 1..327 | 1..327 | 1477 | 91.4 | Plus |
Dsec\GM24393-PA | 1888 | GM24393-PA | 585..768 | 121..302 | 220 | 32.3 | Plus |
Dsec\GM12038-PA | 2216 | GM12038-PA | 137..274 | 167..302 | 207 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24328-PA | 761 | GD24328-PA | 1..327 | 1..327 | 1499 | 92.7 | Plus |
Dsim\GD12464-PA | 1854 | GD12464-PA | 551..734 | 121..302 | 220 | 32.3 | Plus |
Dsim\rut-PA | 2207 | GD15838-PA | 137..274 | 167..302 | 208 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14219-PA | 1168 | GJ14219-PA | 10..336 | 3..327 | 1184 | 74.3 | Plus |
Dvir\GJ12611-PA | 1843 | GJ12611-PA | 561..750 | 121..302 | 216 | 30.8 | Plus |
Dvir\GJ18604-PA | 2222 | GJ18604-PA | 137..274 | 167..302 | 209 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24141-PA | 1182 | GK24141-PA | 11..344 | 4..327 | 1188 | 72.8 | Plus |
Dwil\GK18424-PA | 2214 | GK18424-PA | 138..275 | 167..302 | 214 | 36.7 | Plus |
Dwil\GK17483-PA | 1770 | GK17483-PA | 435..628 | 121..302 | 213 | 30 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12923-PA | 1167 | GE12923-PA | 1..327 | 1..327 | 1467 | 89 | Plus |
Dyak\GE22216-PA | 1659 | GE22216-PA | 357..540 | 121..302 | 221 | 32.3 | Plus |
Dyak\GE16101-PA | 2235 | GE16101-PA | 137..274 | 167..302 | 207 | 36 | Plus |
Translation from 122 to 1147
> LD27878.hyp MEANLENGQKTIASTSKSHSQRQTTSRRRQNDSDVAGGVGITGGGVVILP QHVLNELYHNYSIKQRRSGLKWFVFAAALFNIWTIGIPWDQSAPTRVINC CMLLAYLALTALLHIGRRSDKPALRRFHQILLIIVPRALWLLSILHFTVY VILQPSFSPRDLLGWAILLNFLVYVTLPLQLIFLGLSIGCITYFICLSLP VGYSHWDSLLSNQLAANAVLIATAALIGLLYYFMGEAKQKRAFLEAKKSL EVKMVIEEQSAEQERLLLSVLPKHVAIKMREDLGSSSSEAFKKIYMSRHE NVRNINNCALRFLAIATTVLAVPLMSVQITPSCVCTWDSPW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ac3-PC | 341 | CG1506-PC | 1..341 | 1..341 | 1748 | 100 | Plus |
Ac3-PA | 1167 | CG1506-PA | 1..327 | 1..327 | 1549 | 94.2 | Plus |
CG43373-PB | 1240 | CG42513-PB | 547..730 | 121..302 | 225 | 32.3 | Plus |
CG43373-PC | 1854 | CG42513-PA | 547..730 | 121..302 | 225 | 32.3 | Plus |
rut-PE | 1391 | CG9533-PE | 137..274 | 167..302 | 207 | 36 | Plus |