BDGP Sequence Production Resources |
Search the DGRC for LD27895
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 278 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | Trf2-RH |
Protein status: | LD27895.pep: gold |
Preliminary Size: | 4675 |
Sequenced Size: | 4548 |
Gene | Date | Evidence |
---|---|---|
CG18009 | 2001-11-29 | Blastp of sequenced clone |
CG18009 | 2003-01-01 | Sim4 clustering to Release 3 |
Trf2 | 2008-04-29 | Release 5.5 accounting |
Trf2 | 2008-08-15 | Release 5.9 accounting |
Trf2 | 2008-12-18 | 5.12 accounting |
4548 bp (4548 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069554
> LD27895.complete AAAGCGACCAAAGCCAACAGGAGTCGTCAGAGGAAATTACAGACGAACAG AAGGAAGAAAGCGACGACGTCGAACAACAGTCGCCGGCTGAACATACTTC TTCTGATAGACGCGATCATTCGCCAGACAAGCAACAGAATAAGCGAAAAT CGTTAGGCACTGGGAATTCTTCGTATTCGAAGAAACCATTATTGGACGGT GACAAAGGAGACCCACGTTCACATTTATCGTCTCTGGGAAGTCGCAGATC CTTAAAGCGTAAATGGCCTTTTGATTGTACAGACTCTAAGAAATTTAAAC CAAACTTGCAGAGTGAGGAAGACAAATCTGAGGAGGAAAAACGTGAAGAT ACGGAAAGCGAATGCTCTGACGAAGAAGACTCAGATAGTTCAAGTTTCGA TACAGATTCAAATTCAGATTCAGATTCAAATTTAGATTTAGATTCCGATT CCGATTCCCATTCCGATTTCGAATCATCTTCAAGTTCTGAGGAATCTGCC CAGGATCCAGCTCCTGAAGGCGAAACCGATCAAGATCCAGCTCCTTATTA CGACGATCAGGATCCAGCTTCTTATTACGACGATCACATTTGTGATTCTG AGGAGGATTATAAACCATTTATCTTCTCAAAGGAAAGGAAGTTCTTGAAA TTCGTAACAAATCCTTTAGGGGATGATAAATCTAGTTTGGACCTTAGCAT ACAGCTCTATAAGGTATTTGGAGCTTACAAACTGGAAGACGTATACAGCA GTATTGATGAGGAAGGCCAACCAGAACAGGACCTGCAACTGAAGCAGCAA CAGAAACATTTAAAAAAATATCAAAAGTTGCAACTGGTGGTATTCTGGCA CCAGGAGAAATTCTTTTCAAAGGAGCAACTGTTGCTATATGAGTATCTGA AACTACTTTTGCAGAAATTCTTTCCACAAGAGCAACAGGAGAAACGGTTG CAACAGGAGAAACTTTTGCAACAGGAGAAACTCTTGCAACAGGAGAAACG GTTGCAACAGGAGAAACGGTTGCAACAGGAGAAACGGTTGCAACAGGAGA AACGGTTGCAACAGGAGAAACGGTTGCAACAGCAGAAACTCTTGCAACAG CAGAAACTCTTGCAACAGGAGAAACTCTTGCAACAGCAGAAACTCTTGCA ACAGGAGAAACTCTTGCAACAGGAGAAACTCTTGCAACAGGAGAAACAAT TGCAACAGGAGAAACACTTGCCACAGGAGCGACAGTTGCAACAGGATAAA GTCTTCCTACAGCTACGACAGTTGCAACAGAAGAAAGAACTGGAGGAGCA GCGAGAGCGAAAGCGCCACCTCTTTGAGCAACAGAAACAGTTTGTCCTAG AAAAATTGCGCCAACAGAAGGAGCAGCATCGTCGTCAGCAAAATCGCGTA AAACGCGAACGTAAATTGCGCCAGAAAAAGGAGAAACAGCGCTTGGAATA CGAACGATTCTTGAAGGAATATAGGGAGGACTGTAAACGTCAGTTGCGTT TGCAGCGCGAGCATTATCTGATCAAGATTAAGCAGCTGGAGAAGGCCAGT CAGCGCTCGTTGAAGGGGAATCGAAAGCACAAGCTGATGCAAAACGATAT GGTCAGCATACCGGTGGCCAATTTGAACGGCGGCCTTAAAGCGGCCAGCA GCGGTTCCGGAGTTGGTGTAGTGACCTCCGGCGGCGTCGTATCCTCGGCG GTGCTGGCCAATGCCCCACGTGTATACCTAACGCCCTCCTCCACATTCAT GACCAATCGCCAAATGGCGGGAGTGGCGTCCACCGGAAGAATGAGCGGAC AAGTCGTCGGTGGTTCATCTGGCACAGCCTCAACAGCCGGTACCGTTCGC TATTTTTCGCAATTCAGCAAAATGCAAACGGCCGGCGGACCCAGTTTGCA AAGGAAACTTGCCAACGGGGATACCATTGTTCTGGCAACCGGCAGTAAAA ATATGTTCCTTACTAGCAGCGAAAATAAGGCTAATCTGCCGACCGTCGCC AGCAATGGCAATGGTCTGATCACAGCCAAAATGGATCTATTGGAGGAGGA GGTCATGCAGTCGATAACTGTGATTGATGACGATGACGAGGAGAAAAAGG AAGTCGCTGAAGACGAAGAAGAGAGCAGCAATAATGCCAAACCCATTGAC CTTCACCAGCCAATTGCTGATAATGAGCACGAGCTGGACATTGTGATAAA CAATGTGGTCTGCTCGTTTAGCGTCGGCTGTCACCTGAAGCTGCGCGAAA TTGCGCTGCAGGGATCAAATGTGGAGTACCGTCGCGAGAACGGAATGGTG ACAATGAAGCTCCGCCATCCATACACCACTGCCTCGATTTGGTCGTCGGG GAGGATTACCTGCACTGGTGCCACTTCCGAGTCAATGGCCAAGGTCGCTG CACGCCGCTATGCCAGATGCCTTGGCAAGCTGGGATTTCCCACTCGTTTC CTCAACTTTCGCATTGTCAACGTACTGGGCACCTGCAGCATGCCGTGGGC CATCAAGATCGTCAACTTTTCGGAGCGCCATCGCGAGAACGCCAGCTACG AGCCCGAGCTGCATCCTGGAGTGACTTACAAGATGCGCGATCCCGATCCA AAGGCCACCCTGAAGATCTTCTCCACCGGCAGCGTAACAGTCACCGCGGC TAGCGTAAACCACGTTGAATCGGCTATCCAGCACATATACCCGCTGGTCT TTGATTTCCGCAAGCAACGTTCGGCGGAGGAGCTGCAGCATCTGCGTCAA AAGCAGCGTCTGCAAGCCGGCGGTGATCCCCACGAACTGGAGAAAAATGT CTTGGCCGATAACAAGACTGCTTCCCTTGATAATATCTTTGTTAATACAA CAGCGGCGCACTCTAAATCATCGTCGAATGACCAAACATCAGCACCCGCG ACCATCTTGTCCAGCACAGTTGATAGTATGCCTCGTCTGAAACAGATGGT CAACTATCACCAGATGATGAAGCAAACCCAGGAAGAGCGCCGCCATATAA TGTTTAATGGGGAGAAGGCCAATCCGGCCTCCACCTCATCGGCGGCAGCA GCTCCCTCCACCTCCTCCTCATCGTCCTCATCCGGGGATAATATCTGTGC CAATGCCCGTCGCCGGGCCACCGAATGCTGGGCAACCAAGCTGCAGAATA AGCGTCCACGTTACAATGATCCCGGTACCACGGGCACAATTAACGCCGCA TCGTCCACAGCATCAGCCGCCACATCTTCGTTAGCCTCCCAGGCGACACA TCTGCGTAATCCTCTCAAGACGGCCGCGTTGGCCAATGCACGTATGTTAG GCGCCAAGGTGACAACATGCACACGCAACAGCATAATCGTGCAGCAGCCG CAACGTATCCAAATGCAGCAGCAGCAGCAACAGCTGCAACCGCAGCAGCA ACAGACCAGCTTCTCGCCCAGCGAATTCGATGTTGATGACTTGATCGAGG AGGAGGAGAACAACGAATTGGATATGCCCTTCTAAGCTAGCGCTGCCCGT GCCAAAAAAAAATTTCAACTAAAATGGTTCAAATCGATGATGAAACACTA CAACACTAAACACGCCACACTCACAAATAGCCACGAGCTTCTTTTCGAAT TTGTTGGTTATTCGTTCAAGTCATTTTTCATCACATTTATTTTCGTGTGC TTGCCGCATTTAAACTAAACTCGAGAAAGCCTGGACACCGAAGCGAAAAG CACCCACAGCGAAGCAACAACAACAAACAACAAACAAAACACCGCAGCAA CAACAAAATCAAGAGCCAAATATTTAAAATATAAGATTTACGTTTAAACT ACTTTGTAAGTTAAGCGAGCACACCAGAAACAAACAAGCAGAGATAGCGA ATAGATGATTTCGATCCCGAAGTATCCCAGAAACCTCAATAACATCTAGA TGGTAAGCAAGGGAGCTTACCACACGGTAAACATAAGTTTAGACTTAAAG AAAATACGTATGCGACAGCGTTTTACGTATATAACCGAAATCTGTGGATA GCCTGGATGAGTCACCATCAATCATCGCAATTGCAATCAATTGTGGTGAA AGTAAGAGAACACACATGTAGAACTAATCACCAGGACAGGAAGAGGACGA TACGAGCAAGGTGCCCAGGCGGATCGGATCTCGCAGCTTCCTATCTTATT TTAAATTTTTTTTTGAAGCTGAACTCCAATTCAGTTCTGGCCAAGCAAAC TACAATTCTCAAGTAAAAATCCGTGGAGAGGAGGTGGGGCCAGAGAAAAG CCCACTAGGATAGTTATCAATTATCTGAAGAACAACTGATTAATTTCTTG TATATTCATAGGAAATTTTTTTTGTTTTCGCTATAAGTCCTACATAATAA ATGCTATACATAAGTGCTGCGTGTGGGCGCATAACAAACGAAACGAAATG CGTTTGAATGCGATTATAATATTAATATTATTATGCATATATACAACACA CACAAATACCTATATCTGGTCACTTCTAACCAATTATAAACAAAACTGGA AAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trf2-RF | 7122 | Trf2-RF | 3072..7055 | 527..4510 | 19890 | 99.9 | Plus |
Trf2.a | 7127 | Trf2.a | 3077..7060 | 527..4510 | 19890 | 99.9 | Plus |
Trf2.c | 7298 | Trf2.c | 3148..7131 | 527..4510 | 19890 | 99.9 | Plus |
Trf2-RF | 7122 | Trf2-RF | 2309..2853 | 1..545 | 2725 | 100 | Plus |
Trf2.a | 7127 | Trf2.a | 2314..2858 | 1..545 | 2725 | 100 | Plus |
Trf2.c | 7298 | Trf2.c | 2385..2929 | 1..545 | 2725 | 100 | Plus |
Trf2-RF | 7122 | Trf2-RF | 3022..3104 | 504..586 | 310 | 91.5 | Plus |
Trf2.a | 7127 | Trf2.a | 3027..3109 | 504..586 | 310 | 91.5 | Plus |
Trf2.c | 7298 | Trf2.c | 3098..3180 | 504..586 | 310 | 91.5 | Plus |
Trf2-RF | 7122 | Trf2-RF | 2842..2883 | 504..545 | 195 | 97.6 | Plus |
Trf2.a | 7127 | Trf2.a | 2847..2888 | 504..545 | 195 | 97.6 | Plus |
Trf2.c | 7298 | Trf2.c | 2918..2959 | 504..545 | 195 | 97.6 | Plus |
Trf2-RF | 7122 | Trf2-RF | 2962..3003 | 504..545 | 180 | 95.2 | Plus |
Trf2-RF | 7122 | Trf2-RF | 2932..2973 | 504..545 | 180 | 95.2 | Plus |
Trf2.a | 7127 | Trf2.a | 2967..3008 | 504..545 | 180 | 95.2 | Plus |
Trf2.a | 7127 | Trf2.a | 2937..2978 | 504..545 | 180 | 95.2 | Plus |
Trf2.c | 7298 | Trf2.c | 3008..3049 | 504..545 | 180 | 95.2 | Plus |
Trf2.c | 7298 | Trf2.c | 3038..3079 | 504..545 | 180 | 95.2 | Plus |
Trf2-RF | 7122 | Trf2-RF | 2902..2943 | 504..545 | 165 | 92.8 | Plus |
Trf2-RF | 7122 | Trf2-RF | 2872..2913 | 504..545 | 165 | 92.8 | Plus |
Trf2.a | 7127 | Trf2.a | 2907..2948 | 504..545 | 165 | 92.8 | Plus |
Trf2.a | 7127 | Trf2.a | 2877..2918 | 504..545 | 165 | 92.8 | Plus |
Trf2.c | 7298 | Trf2.c | 2978..3019 | 504..545 | 165 | 92.8 | Plus |
Trf2.c | 7298 | Trf2.c | 2948..2989 | 504..545 | 165 | 92.8 | Plus |
Trf2-RF | 7122 | Trf2-RF | 2992..3033 | 504..545 | 150 | 90.4 | Plus |
Trf2.a | 7127 | Trf2.a | 2997..3038 | 504..545 | 150 | 90.4 | Plus |
Trf2.c | 7298 | Trf2.c | 3068..3109 | 504..545 | 150 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 8317777..8319638 | 527..2388 | 9265 | 99.8 | Plus |
chrX | 22417052 | chrX | 8320026..8321165 | 2646..3785 | 5685 | 99.9 | Plus |
chrX | 22417052 | chrX | 8321224..8321956 | 3784..4505 | 3415 | 98.4 | Plus |
chrX | 22417052 | chrX | 8317014..8317555 | 1..542 | 2695 | 99.8 | Plus |
chrX | 22417052 | chrX | 8319696..8319955 | 2387..2646 | 1300 | 100 | Plus |
chrX | 22417052 | chrX | 8318182..8318501 | 968..1287 | 1135 | 90.3 | Plus |
chrX | 22417052 | chrX | 8318218..8318537 | 932..1251 | 1135 | 90.3 | Plus |
chrX | 22417052 | chrX | 8318182..8318446 | 986..1250 | 980 | 91.3 | Plus |
chrX | 22417052 | chrX | 8318236..8318500 | 932..1196 | 980 | 91.3 | Plus |
chrX | 22417052 | chrX | 8318182..8318464 | 1004..1286 | 860 | 86.9 | Plus |
chrX | 22417052 | chrX | 8318254..8318536 | 932..1214 | 860 | 86.9 | Plus |
chrX | 22417052 | chrX | 8318182..8318422 | 1022..1262 | 725 | 86.7 | Plus |
chrX | 22417052 | chrX | 8318272..8318512 | 932..1172 | 725 | 86.7 | Plus |
chrX | 22417052 | chrX | 8318290..8318512 | 932..1154 | 665 | 86.5 | Plus |
chrX | 22417052 | chrX | 8318182..8318404 | 1040..1262 | 665 | 86.5 | Plus |
chrX | 22417052 | chrX | 8318182..8318410 | 1058..1286 | 650 | 85.6 | Plus |
chrX | 22417052 | chrX | 8318308..8318536 | 932..1160 | 650 | 85.6 | Plus |
chrX | 22417052 | chrX | 8318182..8318374 | 1094..1286 | 530 | 85 | Plus |
chrX | 22417052 | chrX | 8318182..8318368 | 1076..1262 | 530 | 85.6 | Plus |
chrX | 22417052 | chrX | 8318326..8318512 | 932..1118 | 530 | 85.6 | Plus |
chrX | 22417052 | chrX | 8318344..8318536 | 932..1124 | 530 | 85 | Plus |
chrX | 22417052 | chrX | 8318182..8318320 | 1112..1250 | 470 | 89.2 | Plus |
chrX | 22417052 | chrX | 8318362..8318500 | 932..1070 | 470 | 89.2 | Plus |
chrX | 22417052 | chrX | 8318182..8318302 | 1130..1250 | 410 | 89.3 | Plus |
chrX | 22417052 | chrX | 8318380..8318500 | 932..1052 | 410 | 89.3 | Plus |
chrX | 22417052 | chrX | 8318182..8318284 | 1148..1250 | 335 | 88.3 | Plus |
chrX | 22417052 | chrX | 8318398..8318500 | 932..1034 | 335 | 88.3 | Plus |
chrX | 22417052 | chrX | 8317727..8317809 | 504..586 | 310 | 91.6 | Plus |
chrX | 22417052 | chrX | 8318416..8318500 | 932..1016 | 275 | 88.2 | Plus |
chrX | 22417052 | chrX | 8318182..8318266 | 1166..1250 | 275 | 88.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 8426027..8427888 | 527..2388 | 9295 | 99.9 | Plus |
X | 23542271 | X | 8428276..8429415 | 2646..3785 | 5700 | 100 | Plus |
X | 23542271 | X | 8429474..8430200 | 3784..4510 | 3620 | 99.9 | Plus |
X | 23542271 | X | 8425264..8425808 | 1..545 | 2725 | 100 | Plus |
X | 23542271 | X | 8427946..8428205 | 2387..2646 | 1300 | 100 | Plus |
X | 23542271 | X | 8426432..8426751 | 968..1287 | 1135 | 90.3 | Plus |
X | 23542271 | X | 8426468..8426787 | 932..1251 | 1135 | 90.3 | Plus |
X | 23542271 | X | 8426432..8426696 | 986..1250 | 980 | 91.3 | Plus |
X | 23542271 | X | 8426486..8426750 | 932..1196 | 980 | 91.3 | Plus |
X | 23542271 | X | 8426432..8426714 | 1004..1286 | 860 | 86.9 | Plus |
X | 23542271 | X | 8426504..8426786 | 932..1214 | 860 | 86.9 | Plus |
X | 23542271 | X | 8426432..8426672 | 1022..1262 | 725 | 86.7 | Plus |
X | 23542271 | X | 8426522..8426762 | 932..1172 | 725 | 86.7 | Plus |
X | 23542271 | X | 8426540..8426762 | 932..1154 | 665 | 86.5 | Plus |
X | 23542271 | X | 8426432..8426654 | 1040..1262 | 665 | 86.5 | Plus |
X | 23542271 | X | 8426432..8426660 | 1058..1286 | 650 | 85.6 | Plus |
X | 23542271 | X | 8426558..8426786 | 932..1160 | 650 | 85.6 | Plus |
X | 23542271 | X | 8426576..8426762 | 932..1118 | 530 | 85.6 | Plus |
X | 23542271 | X | 8426432..8426624 | 1094..1286 | 530 | 85 | Plus |
X | 23542271 | X | 8426432..8426618 | 1076..1262 | 530 | 85.6 | Plus |
X | 23542271 | X | 8426594..8426786 | 932..1124 | 530 | 85 | Plus |
X | 23542271 | X | 8426432..8426570 | 1112..1250 | 470 | 89.2 | Plus |
X | 23542271 | X | 8426612..8426750 | 932..1070 | 470 | 89.2 | Plus |
X | 23542271 | X | 8426432..8426552 | 1130..1250 | 410 | 89.3 | Plus |
X | 23542271 | X | 8426630..8426750 | 932..1052 | 410 | 89.3 | Plus |
X | 23542271 | X | 8426432..8426534 | 1148..1250 | 335 | 88.3 | Plus |
X | 23542271 | X | 8426648..8426750 | 932..1034 | 335 | 88.3 | Plus |
X | 23542271 | X | 8425977..8426059 | 504..586 | 310 | 91.6 | Plus |
X | 23542271 | X | 8426432..8426516 | 1166..1250 | 275 | 88.2 | Plus |
X | 23542271 | X | 8426666..8426750 | 932..1016 | 275 | 88.2 | Plus |
X | 23542271 | X | 8425797..8425838 | 504..545 | 195 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 8434125..8435986 | 527..2388 | 9295 | 99.9 | Plus |
X | 23527363 | X | 8436374..8437513 | 2646..3785 | 5700 | 100 | Plus |
X | 23527363 | X | 8437572..8438298 | 3784..4510 | 3620 | 99.8 | Plus |
X | 23527363 | X | 8433362..8433906 | 1..545 | 2725 | 100 | Plus |
X | 23527363 | X | 8436044..8436303 | 2387..2646 | 1300 | 100 | Plus |
X | 23527363 | X | 8434075..8434157 | 504..586 | 310 | 91.5 | Plus |
X | 23527363 | X | 8433895..8433936 | 504..545 | 195 | 97.6 | Plus |
X | 23527363 | X | 8434015..8434056 | 504..545 | 180 | 95.2 | Plus |
X | 23527363 | X | 8433985..8434026 | 504..545 | 180 | 95.2 | Plus |
X | 23527363 | X | 8433955..8433996 | 504..545 | 165 | 92.8 | Plus |
X | 23527363 | X | 8433925..8433966 | 504..545 | 165 | 92.8 | Plus |
X | 23527363 | X | 8434045..8434086 | 504..545 | 150 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..3021 | 768..1467 | 290 | 52.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2308..2981 | 775..1457 | 247 | 51.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6713..7110 | 768..1171 | 182 | 52.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2764..3004 | 770..1015 | 167 | 56.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6726..7053 | 760..1102 | 152 | 52.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6733..7015 | 745..1028 | 149 | 51.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6788..6856 | 768..836 | 129 | 65.2 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 5451..5561 | 4396..4503 | 124 | 64.3 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3280..3323 | 781..824 | 121 | 75 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8317014..8317546 | 1..533 | 99 | -> | Plus |
chrX | 8317784..8319637 | 534..2387 | 99 | -> | Plus |
chrX | 8319697..8319955 | 2388..2646 | 100 | -> | Plus |
chrX | 8320027..8321165 | 2647..3785 | 99 | -> | Plus |
chrX | 8321226..8321956 | 3786..4505 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RE | 1427..1923 | 1..497 | 100 | -> | Plus |
Trf2-RE | 2006..2040 | 498..523 | 71 | -> | Plus |
Trf2-RE | 2188..5148 | 524..3485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RE | 1427..1923 | 1..497 | 100 | -> | Plus |
Trf2-RE | 2006..2040 | 498..523 | 71 | -> | Plus |
Trf2-RE | 2188..5148 | 524..3485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RG | 1427..1923 | 1..497 | 100 | -> | Plus |
Trf2-RG | 2006..2040 | 498..523 | 71 | -> | Plus |
Trf2-RG | 2188..5148 | 524..3485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RE | 1427..1923 | 1..497 | 100 | -> | Plus |
Trf2-RE | 2006..2040 | 498..523 | 71 | -> | Plus |
Trf2-RE | 2188..5148 | 524..3485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RG | 1427..1923 | 1..497 | 100 | -> | Plus |
Trf2-RG | 2006..2040 | 498..523 | 71 | -> | Plus |
Trf2-RG | 2188..5148 | 524..3485 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RE | 1427..1930 | 1..504 | 100 | -> | Plus |
Trf2-RE | 2021..2040 | 505..523 | 95 | -> | Plus |
Trf2-RE | 2188..6168 | 524..4505 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RE | 2385..2888 | 1..504 | 100 | -> | Plus |
Trf2-RE | 2979..2998 | 505..523 | 95 | -> | Plus |
Trf2-RE | 3146..7126 | 524..4505 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RF | 2309..2812 | 1..504 | 100 | -> | Plus |
Trf2-RF | 2903..2922 | 505..523 | 95 | -> | Plus |
Trf2-RF | 3070..7050 | 524..4505 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RE | 1427..1930 | 1..504 | 100 | -> | Plus |
Trf2-RE | 2021..2040 | 505..523 | 95 | -> | Plus |
Trf2-RE | 2188..6168 | 524..4505 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trf2-RF | 2309..2812 | 1..504 | 100 | -> | Plus |
Trf2-RF | 2903..2922 | 505..523 | 95 | -> | Plus |
Trf2-RF | 3070..7050 | 524..4505 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8427947..8428205 | 2388..2646 | 100 | -> | Plus |
X | 8425264..8425767 | 1..504 | 100 | -> | Plus |
X | 8425858..8425877 | 505..523 | 95 | -> | Plus |
X | 8426025..8427887 | 524..2387 | 99 | -> | Plus |
X | 8428277..8429415 | 2647..3785 | 100 | -> | Plus |
X | 8429476..8430195 | 3786..4505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8427947..8428205 | 2388..2646 | 100 | -> | Plus |
X | 8425264..8425767 | 1..504 | 100 | -> | Plus |
X | 8425858..8425877 | 505..523 | 95 | -> | Plus |
X | 8426025..8427887 | 524..2387 | 99 | -> | Plus |
X | 8428277..8429415 | 2647..3785 | 100 | -> | Plus |
X | 8429476..8430195 | 3786..4505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8427947..8428205 | 2388..2646 | 100 | -> | Plus |
X | 8425264..8425767 | 1..504 | 100 | -> | Plus |
X | 8425858..8425877 | 505..523 | 95 | -> | Plus |
X | 8426025..8427887 | 524..2387 | 99 | -> | Plus |
X | 8428277..8429415 | 2647..3785 | 100 | -> | Plus |
X | 8429476..8430195 | 3786..4505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8319297..8319800 | 1..504 | 100 | -> | Plus |
arm_X | 8319891..8319910 | 505..523 | 95 | -> | Plus |
arm_X | 8320058..8321920 | 524..2387 | 99 | -> | Plus |
arm_X | 8321980..8322238 | 2388..2646 | 100 | -> | Plus |
arm_X | 8322310..8323448 | 2647..3785 | 100 | -> | Plus |
arm_X | 8323509..8324228 | 3786..4505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8433956..8433975 | 505..523 | 95 | -> | Plus |
X | 8433362..8433865 | 1..504 | 100 | -> | Plus |
X | 8434123..8435985 | 524..2387 | 99 | -> | Plus |
X | 8436045..8436303 | 2388..2646 | 100 | -> | Plus |
X | 8436375..8437513 | 2647..3785 | 100 | -> | Plus |
X | 8437574..8438293 | 3786..4505 | 100 | Plus |
Translation from 2 to 3484
> LD27895.hyp SDQSQQESSEEITDEQKEESDDVEQQSPAEHTSSDRRDHSPDKQQNKRKS LGTGNSSYSKKPLLDGDKGDPRSHLSSLGSRRSLKRKWPFDCTDSKKFKP NLQSEEDKSEEEKREDTESECSDEEDSDSSSFDTDSNSDSDSNLDLDSDS DSHSDFESSSSSEESAQDPAPEGGNDQDPAPYYDDQDPASYYDDHICDSE EDYKPFIFSKERKFLKFVTNPLGDDKSSLDLSIQLYKVFGAYKLEDVYSS IDEEGQPEQDLQLKQQQKHLKKYQKLQLVVFWHQEKFFSKEQLLLYEYLK LLLQKFFPQEQQEKRLQQEKLLQQEKLLQQEKRLQQEKRLQQEKRLQQEK RLQQEKRLQQQKLLQQQKLLQQEKLLQQQKLLQQEKLLQQEKLLQQEKQL QQEKHLPQERQLQQDKVFLQLRQLQQKKELEEQRERKRHLFEQQKQFVLE KLRQQKEQHRRQQNRVKRERKLRQKKEKQRLEYERFLKEYREDCKRQLRL QREHYLIKIKQLEKASQRSLKGNRKHKLMQNDMVSIPVANLNGGLKAASS GSGVGVVTSGGVVSSAVLANAPRVYLTPSSTFMTNRQMAGVASTGRMSGQ VVGGSSGTASTAGTVRYFSQFSKMQTAGGPSLQRKLANGDTIVLATGSKN MFLTSSENKANLPTVASNGNGLITAKMDLLEEEVMQSITVIDDDDEEKKE VAEDEEESSNNAKPIDLHQPIADNEHELDIVINNVVCSFSVGCHLKLREI ALQGSNVEYRRENGMVTMKLRHPYTTASIWSSGRITCTGATSESMAKVAA RRYARCLGKLGFPTRFLNFRIVNVLGTCSMPWAIKIVNFSERHRENASYE PELHPGVTYKMRDPDPKATLKIFSTGSVTVTAASVNHVESAIQHIYPLVF DFRKQRSAEELQHLRQKQRLQAGGDPHELEKNVLADNKTASLDNIFVNTT AAHSKSSSNDQTSAPATILSSTVDSMPRLKQMVNYHQMMKQTQEERRHIM FNGEKANPASTSSAAAAPSTSSSSSSSGDNICANARRRATECWATKLQNK RPRYNDPGTTGTINAASSTASAATSSLASQATHLRNPLKTAALANARMLG AKVTTCTRNSIIVQQPQRIQMQQQQQQLQPQQQQTSFSPSEFDVDDLIEE EENNELDMPF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trf2-PE | 1715 | CG18009-PE | 477..1715 | 1..1160 | 5711 | 92.3 | Plus |
Trf2-PF | 1715 | CG18009-PF | 477..1715 | 1..1160 | 5711 | 92.3 | Plus |
Trf2-PG | 1715 | CG18009-PG | 477..1715 | 1..1160 | 5711 | 92.3 | Plus |
Trf2-PI | 1714 | CG18009-PI | 476..1714 | 1..1160 | 5711 | 92.3 | Plus |
Trf2-PJ | 632 | CG18009-PJ | 1..632 | 529..1160 | 3204 | 100 | Plus |
Translation from 1586 to 3484
> LD27895.pep MQNDMVSIPVANLNGGLKAASSGSGVGVVTSGGVVSSAVLANAPRVYLTP SSTFMTNRQMAGVASTGRMSGQVVGGSSGTASTAGTVRYFSQFSKMQTAG GPSLQRKLANGDTIVLATGSKNMFLTSSENKANLPTVASNGNGLITAKMD LLEEEVMQSITVIDDDDEEKKEVAEDEEESSNNAKPIDLHQPIADNEHEL DIVINNVVCSFSVGCHLKLREIALQGSNVEYRRENGMVTMKLRHPYTTAS IWSSGRITCTGATSESMAKVAARRYARCLGKLGFPTRFLNFRIVNVLGTC SMPWAIKIVNFSERHRENASYEPELHPGVTYKMRDPDPKATLKIFSTGSV TVTAASVNHVESAIQHIYPLVFDFRKQRSAEELQHLRQKQRLQAGGDPHE LEKNVLADNKTASLDNIFVNTTAAHSKSSSNDQTSAPATILSSTVDSMPR LKQMVNYHQMMKQTQEERRHIMFNGEKANPASTSSAAAAPSTSSSSSSSG DNICANARRRATECWATKLQNKRPRYNDPGTTGTINAASSTASAATSSLA SQATHLRNPLKTAALANARMLGAKVTTCTRNSIIVQQPQRIQMQQQQQQL QPQQQQTSFSPSEFDVDDLIEEEENNELDMPF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21727-PA | 1683 | GF21727-PA | 1037..1683 | 1..632 | 1552 | 55.5 | Plus |
Dana\GF11627-PA | 348 | GF11627-PA | 174..347 | 204..377 | 389 | 41.5 | Plus |
Dana\GF14757-PA | 224 | GF14757-PA | 35..223 | 185..376 | 341 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18249-PA | 641 | GG18249-PA | 1..641 | 1..632 | 2390 | 80.1 | Plus |
Dere\GG20753-PA | 349 | GG20753-PA | 175..348 | 204..377 | 388 | 41.5 | Plus |
Dere\GG10512-PA | 224 | GG10512-PA | 1..223 | 157..376 | 357 | 35.1 | Plus |
Dere\GG24500-PA | 251 | GG24500-PA | 34..215 | 193..375 | 150 | 26.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11849-PA | 689 | GH11849-PA | 1..563 | 1..544 | 1375 | 53.1 | Plus |
Dgri\GH10255-PA | 314 | GH10255-PA | 21..198 | 199..378 | 756 | 76.1 | Plus |
Dgri\GH23121-PA | 348 | GH23121-PA | 174..347 | 204..377 | 387 | 41.5 | Plus |
Dgri\GH11614-PA | 220 | GH11614-PA | 31..219 | 185..376 | 338 | 36.9 | Plus |
Dgri\GH10255-PA | 314 | GH10255-PA | 227..299 | 480..558 | 156 | 46.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trf2-PJ | 632 | CG18009-PJ | 1..632 | 1..632 | 3204 | 100 | Plus |
Trf2-PE | 1715 | CG18009-PE | 1084..1715 | 1..632 | 3204 | 100 | Plus |
Trf2-PF | 1715 | CG18009-PF | 1084..1715 | 1..632 | 3204 | 100 | Plus |
Trf2-PH | 632 | CG18009-PH | 1..632 | 1..632 | 3204 | 100 | Plus |
Trf2-PG | 1715 | CG18009-PG | 1084..1715 | 1..632 | 3204 | 100 | Plus |
Trf2-PI | 1714 | CG18009-PI | 1083..1714 | 1..632 | 3204 | 100 | Plus |
Tbp-PA | 353 | CG9874-PA | 179..352 | 204..377 | 350 | 41.5 | Plus |
Trf-PA | 224 | CG7562-PA | 1..223 | 157..376 | 331 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14331-PA | 656 | GI14331-PA | 1..552 | 5..538 | 1323 | 51.4 | Plus |
Dmoj\GI15474-PA | 442 | GI15474-PA | 88..398 | 199..539 | 945 | 56.6 | Plus |
Dmoj\GI18943-PA | 348 | GI18943-PA | 174..347 | 204..377 | 384 | 41.5 | Plus |
Dmoj\GI17918-PA | 220 | GI17918-PA | 31..219 | 185..376 | 342 | 35.9 | Plus |
Dmoj\GI22955-PA | 315 | GI22955-PA | 101..278 | 197..375 | 194 | 28.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16412-PA | 987 | GL16412-PA | 355..852 | 83..551 | 1278 | 54.3 | Plus |
Dper\GL23716-PA | 640 | GL23716-PA | 233..563 | 196..528 | 889 | 54.4 | Plus |
Dper\GL11271-PA | 345 | GL11271-PA | 171..344 | 204..377 | 389 | 41.5 | Plus |
Dper\GL24756-PA | 220 | GL24756-PA | 31..219 | 185..376 | 338 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14764-PA | 1037 | GA14764-PA | 407..881 | 83..529 | 1267 | 55.7 | Plus |
Dpse\GA26713-PA | 642 | GA26713-PA | 233..563 | 196..528 | 843 | 52.6 | Plus |
Dpse\GA22088-PA | 345 | GA22088-PA | 171..344 | 204..377 | 389 | 41.5 | Plus |
Dpse\GA20441-PA | 220 | GA20441-PA | 31..219 | 185..376 | 338 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21561-PA | 278 | GM21561-PA | 6..190 | 211..395 | 1023 | 98.9 | Plus |
Dsec\GM21550-PA | 1302 | GM21550-PA | 1110..1302 | 1..194 | 838 | 92.8 | Plus |
Dsec\GM15696-PA | 352 | GM15696-PA | 178..351 | 204..377 | 388 | 41.5 | Plus |
Dsec\GM16720-PA | 224 | GM16720-PA | 1..223 | 157..376 | 352 | 34.2 | Plus |
Dsec\GM21561-PA | 278 | GM21561-PA | 204..278 | 555..632 | 252 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25175-PA | 352 | GD25175-PA | 178..351 | 204..377 | 388 | 41.5 | Plus |
Dsim\GD23502-PA | 224 | GD23502-PA | 1..223 | 157..376 | 353 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19385-PA | 711 | GJ19385-PA | 1..612 | 5..547 | 1435 | 52.4 | Plus |
Dvir\GJ17285-PA | 387 | GJ17285-PA | 49..223 | 199..375 | 847 | 86.4 | Plus |
Dvir\GJ14917-PA | 352 | GJ14917-PA | 178..351 | 204..377 | 387 | 41.5 | Plus |
Dvir\Tbp-PA | 351 | GJ21317-PA | 177..350 | 204..377 | 387 | 41.5 | Plus |
Dvir\GJ17690-PA | 220 | GJ17690-PA | 31..219 | 185..376 | 340 | 36.4 | Plus |
Dvir\GJ17285-PA | 387 | GJ17285-PA | 285..331 | 490..536 | 174 | 63.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16294-PA | 1222 | GK16294-PA | 508..1075 | 1..548 | 1486 | 56.7 | Plus |
Dwil\GK10649-PA | 351 | GK10649-PA | 177..350 | 204..377 | 385 | 40.9 | Plus |
Dwil\GK15318-PA | 226 | GK15318-PA | 46..225 | 195..376 | 340 | 37.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15780-PA | 1872 | GE15780-PA | 1230..1872 | 1..632 | 2419 | 79.3 | Plus |
Dyak\GE13685-PA | 349 | GE13685-PA | 175..348 | 204..377 | 387 | 41.5 | Plus |
Dyak\GE18732-PA | 224 | GE18732-PA | 1..223 | 157..376 | 358 | 35.1 | Plus |