Clone LD27979 Report

Search the DGRC for LD27979

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:279
Well:79
Vector:pOT2
Associated Gene/TranscriptPatr-1-RA
Protein status:LD27979.pep: validated not full length
Preliminary Size:3487
Sequenced Size:3458

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5208 2000-02-14 Blastp of sequenced clone
CG5201 2001-01-01 Release 2 assignment
CG5175 2001-01-01 Release 2 assignment
CG5148 2001-01-01 Release 2 assignment
CG5169 2001-01-01 Release 2 assignment
CG5184 2001-01-01 Release 2 assignment
CG5208 2001-01-01 Release 2 assignment
Patr-1 2008-04-29 Release 5.5 accounting
Patr-1 2008-08-15 Release 5.9 accounting
Patr-1 2008-12-18 5.12 accounting

Clone Sequence Records

LD27979.complete Sequence

3458 bp (3458 high quality bases) assembled on 2000-02-14

GenBank Submission: AF184229

> LD27979.complete
GGCTCGTTTTTCGGCTTTGACACGAATCTACCGGACGAAGATGGTGGCGA
TGGACGCATCGTCGAGGCGGAATACGATGCCCTCAATGACGAAACCTTTG
GATCCGCTATAAATGGCGACTGGGAGGAAGCCCATGAGACGATGGTACGC
CTGGGCGGGAATGGCGAAAGGGTGCGGAAGCGACCCGCGGAATCTAGTGG
AAATACGGATTTTGCCGATCAGGGAAATGGTGCCTTCCTGCGACACGCTA
ATCCGCTATCATCGGCGCCCTCTTCAAGCGGCTCCACTCCGGCCCCTTTG
AATGCCCCCTTCCGACAGTCTCGTCACATAGGGGACTCGGACTTGGAGCT
AAACATTTCCTCCATGAAGTTGGACGACATGGACCTGTCCTCTTTCACCA
CTGATAGCGAAGCCGGTGGGCTGAGCAACCGCATTAAGCTGGACTCCGGG
GTCTGGGGATCACAGCCGTTTCCCAACAACCAACATTTGTTCCGCGAGCC
TATGCGCAGCGCCTTCAAGCCACAGCAGCAGCAACATCAGCAGCACCAAC
CACAACAAATGAAGCCACCGCAGGAAGCGAATGCCAACTTTGCACTGAAT
CCACAGCCTTTTCCAAAAATTACAACTCTCGAGGATATAGAGCGCAATAT
GATCATTCAGCAGGCCATTCCGAAACAACAGCAGCAGAGCCAGCAACAGG
CGGAACGCAAAATGTTTGATGATTTTAGTCTGGGTAACAGGCAGCAGGTG
CCTACACCAACCATGTTGCAGCAACAGATGTTGCAGCAGCAGCATCATCA
GAAACAACAGTCGCAGCAGCAGCCGCCACAACAAGCGCAGCACAAGGTAC
CCCCTGGCTTCTTGGGCACGCCGCACACCTCTCCACCGAGGCCAAATTTG
GGTTTCCCCGGACCCGAGCTACTGCCCACGCCATCGTCGCAGCAACAACT
AAACGGTATTGGTGGCAACCGAGTGCCGCCCGGATTTATTTACCCGCAAG
GTCTGCCCGGGAATATTCCGCAATTGCCCCAGCATCCTCTAATGCAGCAG
CACATGCCGCACAACTTTCCACTGCCCGGCGGCAACCAGCGACCTCTACC
CAATCCACAAGCTCTGCCCACGGCCCTGAACAATTTCGCGATGCATCCAA
GCTTCAATGCGATGCGCGCCGCTGGAATCCATCCAGGGGCTTTTATGCAA
CCTCCCCATCCGCACCAGATGCTGCCACCGCGAATGCCGCCGCACCCGCT
GCAAGCTGCCACAAGTCTATTAGGTCAGCAGCCACCGAATTCCATGTATA
ACATGTTCAACATGCGACTAGTGCAAGAGATCCAGCAAAACCATCCGCTG
CTTCAACAGGCTGCTGTTGTACGCCAAATGCAACAGAGCAGAGCAGGATC
CGTGGCCAGCGATCGTCAGAGATCGCAGGCGCAACAGCAGCAACAAGGAC
GACGTCCAGATGGTACAGGAAATTACCCGCTGGAAGAGTACGATGAATAT
GCCAACCTAATGAGCACGCGCGACAAGCACTGGCTAATCGGAATCCAGCT
TTCGCAGCTGAATACGGACACGCCGTATATCGACGACTATTACTACACGG
TGTTCAGGGAGCGCAAGGCCCAACAGAACGGGCAAATGCGCAACAGTCAG
GCGCACAAGGACAACCAGTTGAATCATCCGCTTACTCAGCCACGCGGCCA
TGCGCAGCTTATTCTCGTACAGTTGGGCAACAAGAATGGTACTCGCAATG
GACACGGACGTGAGCGACGCAACTCGGAGAACACCAACAGCACGTCAGGC
AACACGAACAATGGATCAGGTGGTAACAACAACAACCTGACAGGCTATAT
ATTCTCACCACTGAAGTTCGAGAACTCACTGGGAAAGCTACAGTACGGAA
GTGTGACAGCTCCGCGAAAAATTATCGATGCTGACATTATGAGTGGTGAA
TCAAATGCCGCTGCTGAAGCCAACGCAACTTCTTCATCAAAAAGCTCGAC
TCCGCTGCCCACCTCCGCGAGCCATGATGTAAATCCCAGTAGCATGCGGA
AGTCGCGACACATTTTGCTTCTGATTGAAACACTGTATCGCTATCTGCTG
AAGTTGGAGGATTTGGAAAGCCCAGAAGTGATGGCCACCATTGAGCTGAA
AAAGAAAAAGGAAGCCGAACGGATCGCAGCCCTTGAGCAGCTGGAAATGG
CCAATAAAACGCCCGAAGAACGTGCTGCTGAAGCCGCCAATCCGCAAACC
ATGAATCCGCAACTAAAGAACAAGTTCAACTATGAGGTAGAGACGAAAGC
TGCGTTGGTCAATAAATTAAAGGCAGGTCTGGCCTTCGACAAGGTTATCG
CCATGATGAATGTGCGCAAGGGAAAGATACTTATTAGACGCATAATGCCC
TTTATTGCGGATCAAAGCATTCGCTGGGTCGTGTGGAGCGGCGTCTTCTG
TTCCCTACAAACAGTGGTGAAAAAGGACAAGGACGACGTTGAAGGCGTCT
TGTACGCTCTTTACCCAGAGTTTAAAAAACACGTTAACAAAGCTACTTTC
GAACTCCTAGTGAGCATTTCATCTGCTATTACGCTGAATGACAAGAAACT
TGCTGGAATTTTTTGCAGTCGCTTTGGAATCCTTTCGCTGGTTGCCCTGA
TACTTCGCGCCGAGGAAATCTACGTCTCGCGAACTGACGCAACTCTTAGC
GAGGAGAACAGGCAAAAGTGGCGAGAATTTCTGGCACAGGTTGCATCCTG
CCTCAATCGCACTATTCAAAACCAGACCATCTCGGCAGCCATTGAGTCGG
ATGCAATTCAGCCACTTATGGACCACTTTGAACGGTTTAAAGATCTTAAA
CTGGATGCACTCTTAGCATTAATAACTGAAGCCAGGCATCAAATTGATTA
GGTTGCTTTGACGGATTTTCATTTAACTTGATTGAAGCGTTTCAAATAAT
TGTGAAATTATATAGCCGAGTTCACTTTGCTTTACTCAATTACGCATATG
TTTGTATAGAATATGTATCCAAAACTTACATATGTACGATCGTTTTTACA
TTTACGCATACTACACAAAAATATTGATACAGGGTATAAAAATCTCATAC
TGAAATTGAGAAAGTACTCGACTGTCAATAAATTTTGATAATAGTTTGTT
AGAAACGTTCTTTTATCCAAAATTGTGTGCACTGTACAAGAAAGGTAGAG
AGAGGAAATCATGTTTTATAAATATAATATCGAATGGTAGGTTTTGCTCA
TTGTACATACTTATATCATTTTATATTCGATAAGGAGTACTTTTCCGGCA
TTTTCTGTAGAGATTTATAAAGAATAATTCACCCCACAAATTATTCTTTT
TTTTTTTTTGTCATCGAATTAACAACTGGGCTCTCCTATATCTTGTAATC
ACGATTGTAAAAGGAATATCATAAATACGTTTTAAAATTTAAAAAAAAAA
AAAAAAAA

LD27979.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:42:01
Subject Length Description Subject Range Query Range Score Percent Strand
Patr-1-RA 3776 Patr-1-RA 107..3548 3..3444 17210 100 Plus
Patr-1.b 4297 Patr-1.b 107..3548 3..3444 17210 100 Plus
Patr-1.a 3530 Patr-1.a 69..3480 33..3444 17060 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12869374..12870903 847..2376 7650 100 Plus
chr3R 27901430 chr3R 12868330..12869144 33..847 4075 100 Plus
chr3R 27901430 chr3R 12871323..12872138 2623..3440 4025 99.8 Plus
chr3R 27901430 chr3R 12871019..12871266 2375..2622 1240 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:20:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:36:38
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17044902..17046431 847..2376 7650 100 Plus
3R 32079331 3R 17046851..17047672 2623..3444 4110 100 Plus
3R 32079331 3R 17043858..17044672 33..847 4075 100 Plus
3R 32079331 3R 17046547..17046794 2375..2622 1240 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:03:01
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 16785733..16787262 847..2376 7650 100 Plus
3R 31820162 3R 16787682..16788503 2623..3444 4110 100 Plus
3R 31820162 3R 16784689..16785503 33..847 4075 100 Plus
3R 31820162 3R 16787378..16787625 2375..2622 1240 100 Plus
3R 31820162 3R 16784489..16784520 3..34 160 100 Plus
Blast to na_te.dros performed 2019-03-16 16:36:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2634..2964 523..853 224 55.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6897 658..833 213 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6742..6935 644..853 201 61.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2330..2659 506..842 192 56.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2350..2695 518..864 192 54.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2341..2512 674..842 167 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6781..6849 506..575 167 72.9 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 946..1042 489..587 166 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6711..6902 514..711 163 62 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6760..6834 506..581 161 69.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2487..2815 526..842 159 55.1 Plus
roo 9092 roo DM_ROO 9092bp 1119..1179 518..576 147 73.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6804..6872 518..588 143 69 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2789..2980 506..698 142 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6814..6879 506..575 142 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2434..2627 502..699 141 57.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6739..6808 506..576 136 67.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2876..2971 748..842 135 61.5 Plus
roo 9092 roo DM_ROO 9092bp 1096..1255 506..662 133 57.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2808..3004 507..704 131 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2363..2539 644..821 130 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2433..2474 517..558 129 78.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6828..6901 502..576 129 65.3 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3264..3360 493..587 128 63.3 Plus
roo 9092 roo DM_ROO 9092bp 1066..1135 506..576 127 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6763..6956 644..838 126 55.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6900 518..698 125 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1510..1594 499..581 123 62.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6981..7042 521..582 121 66.1 Plus
roo 9092 roo DM_ROO 9092bp 1117..1177 506..564 120 68.9 Plus

LD27979.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:37:43 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12868128..12868160 1..33 96 -> Plus
chr3R 12868331..12869064 34..767 100 == Plus
chr3R 12869132..12869144 835..847 100 -> Plus
chr3R 12869375..12870903 848..2376 100 -> Plus
chr3R 12871021..12871266 2377..2622 100 -> Plus
chr3R 12871323..12872138 2623..3440 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:07:32 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 7..2907 1..2901 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:34:59 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 7..2907 1..2901 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:19:53 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 7..2907 1..2901 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:10:43 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 7..2907 1..2901 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:35:32 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 7..2907 1..2901 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:37:41 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 89..3528 1..3440 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:34:58 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 89..3528 1..3440 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:53 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 93..3532 1..3440 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:10:43 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 89..3528 1..3440 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:35:32 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
Patr-1-RA 93..3532 1..3440 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:43 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17046549..17046794 2377..2622 100 -> Plus
3R 17043656..17043688 1..33 96 -> Plus
3R 17043859..17044672 34..847 100 -> Plus
3R 17044903..17046431 848..2376 100 -> Plus
3R 17046851..17047668 2623..3440 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:43 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17046549..17046794 2377..2622 100 -> Plus
3R 17043656..17043688 1..33 96 -> Plus
3R 17043859..17044672 34..847 100 -> Plus
3R 17044903..17046431 848..2376 100 -> Plus
3R 17046851..17047668 2623..3440 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:43 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17046549..17046794 2377..2622 100 -> Plus
3R 17043656..17043688 1..33 96 -> Plus
3R 17043859..17044672 34..847 100 -> Plus
3R 17044903..17046431 848..2376 100 -> Plus
3R 17046851..17047668 2623..3440 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:53 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12869378..12869410 1..33 96 -> Plus
arm_3R 12869581..12870394 34..847 100 -> Plus
arm_3R 12870625..12872153 848..2376 100 -> Plus
arm_3R 12872271..12872516 2377..2622 100 -> Plus
arm_3R 12872573..12873390 2623..3440 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:47:12 Download gff for LD27979.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16784690..16785503 34..847 100 -> Plus
3R 16785734..16787262 848..2376 100 -> Plus
3R 16787380..16787625 2377..2622 100 -> Plus
3R 16787682..16788499 2623..3440 100   Plus
3R 16784487..16784519 1..33 96 -> Plus

LD27979.pep Sequence

Translation from 0 to 2900

> LD27979.pep
GSFFGFDTNLPDEDGGDGRIVEAEYDALNDETFGSAINGDWEEAHETMVR
LGGNGERVRKRPAESSGNTDFADQGNGAFLRHANPLSSAPSSSGSTPAPL
NAPFRQSRHIGDSDLELNISSMKLDDMDLSSFTTDSEAGGLSNRIKLDSG
VWGSQPFPNNQHLFREPMRSAFKPQQQQHQQHQPQQMKPPQEANANFALN
PQPFPKITTLEDIERNMIIQQAIPKQQQQSQQQAERKMFDDFSLGNRQQV
PTPTMLQQQMLQQQHHQKQQSQQQPPQQAQHKVPPGFLGTPHTSPPRPNL
GFPGPELLPTPSSQQQLNGIGGNRVPPGFIYPQGLPGNIPQLPQHPLMQQ
HMPHNFPLPGGNQRPLPNPQALPTALNNFAMHPSFNAMRAAGIHPGAFMQ
PPHPHQMLPPRMPPHPLQAATSLLGQQPPNSMYNMFNMRLVQEIQQNHPL
LQQAAVVRQMQQSRAGSVASDRQRSQAQQQQQGRRPDGTGNYPLEEYDEY
ANLMSTRDKHWLIGIQLSQLNTDTPYIDDYYYTVFRERKAQQNGQMRNSQ
AHKDNQLNHPLTQPRGHAQLILVQLGNKNGTRNGHGRERRNSENTNSTSG
NTNNGSGGNNNNLTGYIFSPLKFENSLGKLQYGSVTAPRKIIDADIMSGE
SNAAAEANATSSSKSSTPLPTSASHDVNPSSMRKSRHILLLIETLYRYLL
KLEDLESPEVMATIELKKKKEAERIAALEQLEMANKTPEERAAEAANPQT
MNPQLKNKFNYEVETKAALVNKLKAGLAFDKVIAMMNVRKGKILIRRIMP
FIADQSIRWVVWSGVFCSLQTVVKKDKDDVEGVLYALYPEFKKHVNKATF
ELLVSISSAITLNDKKLAGIFCSRFGILSLVALILRAEEIYVSRTDATLS
EENRQKWREFLAQVASCLNRTIQNQTISAAIESDAIQPLMDHFERFKDLK
LDALLALITEARHQID*

LD27979.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:44:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17081-PA 983 GF17081-PA 3..983 2..966 3505 77.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:44:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21951-PA 983 GG21951-PA 4..983 2..966 4105 93.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:44:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19557-PA 968 GH19557-PA 4..968 2..966 2660 62.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:08:26
Subject Length Description Subject Range Query Range Score Percent Strand
Patr-1-PB 968 CG5208-PB 4..968 2..966 5044 100 Plus
Patr-1-PA 968 CG5208-PA 4..968 2..966 5044 100 Plus
CG44085-PP 2246 CG44085-PP 284..819 169..670 186 23.2 Plus
Ptip-PA 2294 CG32133-PA 702..1139 155..573 183 23.3 Plus
Ptip-PA 2294 CG32133-PA 812..1247 155..574 182 24.5 Plus
kto-PA 2531 CG8491-PA 1966..2388 175..547 181 25.8 Plus
CG10555-PB 926 CG10555-PB 274..662 152..497 178 24.6 Plus
CG10555-PA 926 CG10555-PA 274..662 152..497 178 24.6 Plus
Wnk-PO 2243 CG7177-PO 879..1211 175..471 170 25.2 Plus
Wnk-PN 2441 CG7177-PN 1077..1409 175..471 170 25.2 Plus
Wnk-PL 2441 CG7177-PL 1077..1409 175..471 170 25.2 Plus
Wnk-PM 2462 CG7177-PM 1077..1409 175..471 170 25.2 Plus
Wnk-PM 2462 CG7177-PM 985..1554 153..690 165 23.8 Plus
kto-PA 2531 CG8491-PA 1943..2208 180..485 164 27.3 Plus
Wnk-PO 2243 CG7177-PO 787..1348 153..677 164 23.7 Plus
Wnk-PN 2441 CG7177-PN 985..1546 153..677 164 23.7 Plus
Wnk-PL 2441 CG7177-PL 985..1546 153..677 164 23.7 Plus
MED25-PA 863 CG12254-PA 241..474 220..491 163 28.3 Plus
Lasp-PC 636 CG3849-PC 145..388 154..412 162 27.5 Plus
Lasp-PB 657 CG3849-PB 166..409 154..412 162 27.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23853-PA 932 GI23853-PA 4..932 2..966 2883 65.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:44:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24550-PA 896 GL24550-PA 4..896 2..966 2964 66.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:44:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18738-PA 979 GA18738-PA 4..979 2..966 3396 73.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:44:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15200-PA 971 GM15200-PA 4..971 2..966 5006 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:44:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19133-PA 974 GD19133-PA 4..974 2..966 5049 97.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:44:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10568-PA 937 GJ10568-PA 4..937 2..966 2944 65.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:44:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13843-PA 1031 GK13843-PA 4..1031 2..966 2801 63.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:44:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24605-PA 980 GE24605-PA 4..980 2..966 4095 92.7 Plus
Dyak\GE11190-PA 108 GE11190-PA 3..108 861..966 541 97.2 Plus

LD27979.hyp Sequence

Translation from 0 to 2900

> LD27979.hyp
DSFFGFDTNLPDEDGGDGRIVEAEYDALNDETFGSAINGDWEEAHETMVR
LGGNGERVRKRPAESSGNTDFADQGNGAFLRHANPLSSAPSSSGSTPAPL
NAPFRQSRHIGDSDLELNISSMKLDDMDLSSFTTDSEAGGLSNRIKLDSG
VWGSQPFPNNQHLFREPMRSAFKPQQQQHQQHQPQQMKPPQEANANFALN
PQPFPKITTLEDIERNMIIQQAIPKQQQQSQQQAERKMFDDFSLGNRQQV
PTPTMLQQQMLQQQHHQKQQSQQQPPQQAQHKVPPGFLGTPHTSPPRPNL
GFPGPELLPTPSSQQQLNGIGGNRVPPGFIYPQGLPGNIPQLPQHPLMQQ
HMPHNFPLPGGNQRPLPNPQALPTALNNFAMHPSFNAMRAAGIHPGAFMQ
PPHPHQMLPPRMPPHPLQAATSLLGQQPPNSMYNMFNMRLVQEIQQNHPL
LQQAAVVRQMQQSRAGSVASDRQRSQAQQQQQGRRPDGTGNYPLEEYDEY
ANLMSTRDKHWLIGIQLSQLNTDTPYIDDYYYTVFRERKAQQNGQMRNSQ
AHKDNQLNHPLTQPRGHAQLILVQLGNKNGTRNGHGRERRNSENTNSTSG
NTNNGSGGNNNNLTGYIFSPLKFENSLGKLQYGSVTAPRKIIDADIMSGE
SNAAAEANATSSSKSSTPLPTSASHDVNPSSMRKSRHILLLIETLYRYLL
KLEDLESPEVMATIELKKKKEAERIAALEQLEMANKTPEERAAEAANPQT
MNPQLKNKFNYEVETKAALVNKLKAGLAFDKVIAMMNVRKGKILIRRIMP
FIADQSIRWVVWSGVFCSLQTVVKKDKDDVEGVLYALYPEFKKHVNKATF
ELLVSISSAITLNDKKLAGIFCSRFGILSLVALILRAEEIYVSRTDATLS
EENRQKWREFLAQVASCLNRTIQNQTISAAIESDAIQPLMDHFERFKDLK
LDALLALITEARHQID*

LD27979.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:20:58
Subject Length Description Subject Range Query Range Score Percent Strand
Patr-1-PB 968 CG5208-PB 3..968 1..966 5050 100 Plus
Patr-1-PA 968 CG5208-PA 3..968 1..966 5050 100 Plus
CG44085-PP 2246 CG44085-PP 284..819 169..670 186 23.2 Plus
ptip-PA 2294 CG32133-PA 702..1139 155..573 183 23.3 Plus
ptip-PA 2294 CG32133-PA 812..1247 155..574 182 24.5 Plus
kto-PA 2531 CG8491-PA 1966..2388 175..547 181 25.8 Plus