Clone LD27988 Report

Search the DGRC for LD27988

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:279
Well:88
Vector:pOT2
Associated Gene/Transcriptl(1)G0232-RA
Protein status:LD27988.pep: gold
Preliminary Size:3210
Sequenced Size:3045

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3102 2001-01-01 Release 2 assignment
CG32697 2001-07-04 Blastp of sequenced clone
CG32697 2003-01-01 Sim4 clustering to Release 3
l(1)G0232 2008-04-29 Release 5.5 accounting
l(1)G0232 2008-08-15 Release 5.9 accounting
l(1)G0232 2008-12-18 5.12 accounting

Clone Sequence Records

LD27988.complete Sequence

3045 bp (3045 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051749

> LD27988.complete
TCGACGCGCGTTCATCTCATCTCATCCGCCTCGTGCGCTCGCGTCTGTTC
GCTGTGATGTGGAATTAAATTATTATTATTATTTATTTATTTGTTTTTGT
GCGTGTGTGTGCAATATAGTGTTTGTTCCAGAGTGTGGGTGTGTGAAAAA
TGCCGTAAAATGCAGCAAACGCAATGGAATAAGGACAGGCAGGAGGATAG
AAACAACAATAGCGGCAGCAGGAGCGAGCAGGATAGCGGCTGTCATCGGC
GTCTTTTCCTGTGCATTGCCAAGGCTGTGAAACAATTCATTGATCTCTGC
AACAATCTAGGTGCTAACTGCAGCACGACGACAGCCACATCCCCGTCAAC
TTCCTCCTCCTCAGCCAGCAGCACGCAGAACTTAATAGCAGTAGTGCCGC
CACAGTTGCAGCAGCTGCAGGTGCAATTACCGGCGCCAGGTGGAGGAGGA
GGAGCAGGTGCAGGAGGAGGAGGTGGTGGAGGTGGGGGAGCTGCGCCTGT
GAGGCGCCACATCTCGCATACGACAGCCGTGAAGTTTTTGTACGCCCGTA
AATTTGATATACCACGAGCAGTCTCACTGTACGAACAGCATGAACAGATC
CGCCTGAAGGAGTATCTATATAACATCGATCCGGATGTGGAGCCCTTGCG
CTCCGAGTTGCAGACCGGCAAGTTCACAATCCTGCCCGCACGCACTTCCA
GTGGCGCTGCCATCGCCCTTTTCACCGCCAATCGACACAGTCCGCTGAGC
GTTTCGCACACAACCACGCTGCAGGGCATCGTCTATCAGCTGGACAGTGC
GCTCCAGGATTCGGAGACGCAGCGTGCCGGGCTCGTTTTTATCTACGACA
TGAGCGGCTCCAAGTATTCCAACTTCGACTACGACCTCTCCCAGAAGATT
CTCACACTGCTTAAGGGCGGCTATCCAGCGCGTCTGAAGAAGGTCCTGAT
CGTGACGGCGCCACTGTGGTTCAAGGCACCCTTCAAGATCCTGCGTCTGT
TCGTGCGCGAGAAGCTGCGCGAGCGAGTGTTCACTGTATCGGTGCCTCAA
TTGGCGCTGCACGTGCCGCGCAAGGCGCTGCCCATTCACTTGGGTGGCAC
GCTGGAGGTCGATCACGCCACATGGTTGCTCAGCTGCCGCCAATCGATGA
CGAATCGTGAGGACGAGCTGCTGGCCAATATCGTGGGTGTGGGCGGTGGA
TCCGGATCCGGTTCAGCAGCTGGATCAGCAGCAATTGTGTCCACCAATGG
CACGGAAACCGAGGCCGCGACAACGGCAGCCACGATAATCAGCGCCGTCC
ACCAGTTGGGCGATAATAATACCACCGTGGTGACGGTCAGCAATGGCGTC
GGTCCAGCTGGATCGGCATCTGGCGGAGCAACGACAGCAGCGTCGGCGGC
GACGGAACCCAACGAAAATATCACAATCAACGGACTGAGTCCAAGCCACC
GTCAGGCGGCGAATAACAGCAGTAGCAGTAGCAGCAGTGCAGCCACAGTG
GCCAATCCCCTCAAGCTCAACACAAGTGGCTCCGCGGACAACAATAGTAC
CATCACGAACGCCACCACAGCTGCTGGAGCAGCCGGAGCAGCTGCTGGCA
CCACCACCAATGGCGGCGGCGAGTTCTGGTCAGAGAATCCACCCAGCAGC
GCCTCATCCGGCTTCAGTGACGATGATAGTCTCGCCGGTCAAGAGGGCGA
TCCCAAGCCCATTGATCAGATTGTTCAGATGGTTAAGCAGCGCGGACGCC
ATGGTCTGATTAAGGAGTACGCGGACATTCGGAATAGGGCGCCCGAGGGC
ACCTTTCTGCATGCGAGAATGCGGGCCAATCTGACCAAGAATCGCTACAC
AGACGTCCTCTGCTACGATCACAGTCGAGTTGTTCTGGCACACGAAGACG
GCGACGAGCCGTCGGATTATATTAATGCGAATTTCGTCGATGGCTACAAA
CAAAAGAATGCCTATATTTCAACTCAAGGTCCATTACCAAAGACATCCCA
GGACTTTTGGCGCATGATCTGGGAACAACATTGTTTAGTTATAGTGATGA
CGACGCGCGTGATGGAGCGCGGACGCGTGAAATGCGGCCAGTACTGGGAG
CCGACTGAAGAAAGTTCCTTAGAGTTTGGCGACTACCATGTGCGAACAAT
TAGCGTTGAGTGCAACGAGGACTATATGGTTGCCTCGTTAGAATTGAGAA
ACATAAAGACTGACGAAATTCGCAATGTCTCACATTGGCAGTTCACCAGC
TGGCCGGACTATGGCGTTCCCAGCTCGGCCATGGCCATGCTGAACTTCCT
GCAGAAGGTGCGTGAGAAGCAGGCGCAGCTTGTCCAAGGACTGGGCGACA
CCTGGGCGGGTCATCCCCGTGGACCGCCCATTGTGGTGCACTGCAGTGCA
GGCATTGGACGCACAGGTACATTCATCACCCTGGACATTTGCATATCGCG
CCTGGAGGACGTGGGCACGGCGGACATACGTGGAACGGTTGAGAAGATCC
GGTCGCAGCGAGCCTACTCCATTCAGATGCCCGATCAGTACGTGTTCTGT
CACCTGGCCCTCATCGAATACGCATATTCGCGTGGAATGCTACAGACGGT
CGATCTGGCTGGCTTCGATGAGCGCGAACCGGACTCGGAGTAGGATAATA
CTACCAACACAGTCCTTGGACCGGAAGAGGGACGAGAAAACAACGTGTAT
ACAGAATAATTTTATGTTTTACCATTGCAAATTGGAGTTGTAACTTTCTT
CGACTAGATAGATGTTCGTCCTGATATGATATAATATGGTATATATGATA
CGAGAGAAACGATCGGAAGCACAGATAGATTCCGAGACAAGGAGACACGG
ACGAGGGAGATGAAATTGTAGAGAGTAGAGTAAAAAATTTACGTTAATCT
ATTATTTTTTTTTTAAATATTATTACACACCAAGCTATAGTTGTATAGCA
AAAACATCTATATATAAACATTATTTAAATTAAATTTAAAATGAAAAACA
AATAGCTAAAAATAAAGAAACAAAAACAAAAAAAAAAAAAAAAAA

LD27988.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:32:03
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0232.h 4077 l(1)G0232.h 71..3101 1..3031 15155 100 Plus
l(1)G0232.l 3598 l(1)G0232.l 71..3101 1..3031 15155 100 Plus
l(1)G0232-RA 3148 l(1)G0232-RA 71..3101 1..3031 15155 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 9521909..9522812 1817..914 4520 100 Minus
chrX 22417052 chrX 9520437..9521051 3027..2413 3075 100 Minus
chrX 22417052 chrX 9535672..9536084 684..272 2065 100 Minus
chrX 22417052 chrX 9542199..9542472 274..1 1370 100 Minus
chrX 22417052 chrX 9535371..9535603 916..684 1165 100 Minus
chrX 22417052 chrX 9521383..9521614 2208..1977 1160 100 Minus
chrX 22417052 chrX 9521109..9521320 2418..2207 1060 100 Minus
chrX 22417052 chrX 9521676..9521840 1980..1816 825 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:20:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:08:56
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9630194..9631097 1817..914 4520 100 Minus
X 23542271 X 9628718..9629336 3031..2413 3095 100 Minus
X 23542271 X 9643957..9644369 684..272 2065 100 Minus
X 23542271 X 9650484..9650757 274..1 1370 100 Minus
X 23542271 X 9643656..9643888 916..684 1165 100 Minus
X 23542271 X 9629668..9629899 2208..1977 1160 100 Minus
X 23542271 X 9629394..9629605 2418..2207 1060 100 Minus
X 23542271 X 9629961..9630125 1980..1816 825 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:54:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 9638292..9639195 1817..914 4520 100 Minus
X 23527363 X 9636816..9637434 3031..2413 3095 100 Minus
X 23527363 X 9652055..9652467 684..272 2065 100 Minus
X 23527363 X 9658582..9658855 274..1 1370 100 Minus
X 23527363 X 9651754..9651986 916..684 1165 100 Minus
X 23527363 X 9637766..9637997 2208..1977 1160 100 Minus
X 23527363 X 9637492..9637703 2418..2207 1060 100 Minus
X 23527363 X 9638059..9638223 1980..1816 825 100 Minus
Blast to na_te.dros performed on 2019-03-16 04:08:57 has no hits.

LD27988.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:10:06 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 9521678..9521838 1818..1978 100 <- Minus
chrX 9520457..9521047 2417..3007 100 <- Minus
chrX 9521111..9521318 2209..2416 100 <- Minus
chrX 9521383..9521612 1979..2208 100 <- Minus
chrX 9521909..9522810 916..1817 100 <- Minus
chrX 9535372..9535602 685..915 100 <- Minus
chrX 9535672..9536082 274..684 100 <- Minus
chrX 9542200..9542472 1..273 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:42:13 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 1..2484 160..2643 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:20:56 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 1..2484 160..2643 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:18:18 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 1..2484 160..2643 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:52:36 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 1..2484 160..2643 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:28:28 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 1..2484 160..2643 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:42:12 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 1..3007 1..3007 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:20:56 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 20..3026 1..3007 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:18:18 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 20..3026 1..3007 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:52:36 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 1..3007 1..3007 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:28:28 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0232-RA 20..3026 1..3007 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:10:06 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
X 9629668..9629897 1979..2208 100 <- Minus
X 9628742..9629332 2417..3007 100 <- Minus
X 9629396..9629603 2209..2416 100 <- Minus
X 9629963..9630123 1818..1978 100 <- Minus
X 9630194..9631095 916..1817 100 <- Minus
X 9643657..9643887 685..915 100 <- Minus
X 9643957..9644367 274..684 100 <- Minus
X 9650485..9650757 1..273 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:10:06 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
X 9629668..9629897 1979..2208 100 <- Minus
X 9628742..9629332 2417..3007 100 <- Minus
X 9629396..9629603 2209..2416 100 <- Minus
X 9629963..9630123 1818..1978 100 <- Minus
X 9630194..9631095 916..1817 100 <- Minus
X 9643657..9643887 685..915 100 <- Minus
X 9643957..9644367 274..684 100 <- Minus
X 9650485..9650757 1..273 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:10:06 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
X 9629668..9629897 1979..2208 100 <- Minus
X 9628742..9629332 2417..3007 100 <- Minus
X 9629396..9629603 2209..2416 100 <- Minus
X 9629963..9630123 1818..1978 100 <- Minus
X 9630194..9631095 916..1817 100 <- Minus
X 9643657..9643887 685..915 100 <- Minus
X 9643957..9644367 274..684 100 <- Minus
X 9650485..9650757 1..273 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:18:18 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9544518..9544790 1..273 100   Minus
arm_X 9522775..9523365 2417..3007 100 <- Minus
arm_X 9523429..9523636 2209..2416 100 <- Minus
arm_X 9523701..9523930 1979..2208 100 <- Minus
arm_X 9523996..9524156 1818..1978 100 <- Minus
arm_X 9524227..9525128 916..1817 100 <- Minus
arm_X 9537690..9537920 685..915 100 <- Minus
arm_X 9537990..9538400 274..684 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:31:07 Download gff for LD27988.complete
Subject Subject Range Query Range Percent Splice Strand
X 9658583..9658855 1..273 100   Minus
X 9636840..9637430 2417..3007 100 <- Minus
X 9637494..9637701 2209..2416 100 <- Minus
X 9637766..9637995 1979..2208 100 <- Minus
X 9638061..9638221 1818..1978 100 <- Minus
X 9638292..9639193 916..1817 100 <- Minus
X 9651755..9651985 685..915 100 <- Minus
X 9652055..9652465 274..684 100 <- Minus

LD27988.pep Sequence

Translation from 159 to 2642

> LD27988.pep
MQQTQWNKDRQEDRNNNSGSRSEQDSGCHRRLFLCIAKAVKQFIDLCNNL
GANCSTTTATSPSTSSSSASSTQNLIAVVPPQLQQLQVQLPAPGGGGGAG
AGGGGGGGGGAAPVRRHISHTTAVKFLYARKFDIPRAVSLYEQHEQIRLK
EYLYNIDPDVEPLRSELQTGKFTILPARTSSGAAIALFTANRHSPLSVSH
TTTLQGIVYQLDSALQDSETQRAGLVFIYDMSGSKYSNFDYDLSQKILTL
LKGGYPARLKKVLIVTAPLWFKAPFKILRLFVREKLRERVFTVSVPQLAL
HVPRKALPIHLGGTLEVDHATWLLSCRQSMTNREDELLANIVGVGGGSGS
GSAAGSAAIVSTNGTETEAATTAATIISAVHQLGDNNTTVVTVSNGVGPA
GSASGGATTAASAATEPNENITINGLSPSHRQAANNSSSSSSSAATVANP
LKLNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPPSSASS
GFSDDDSLAGQEGDPKPIDQIVQMVKQRGRHGLIKEYADIRNRAPEGTFL
HARMRANLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKN
AYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTE
ESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDEIRNVSHWQFTSWPD
YGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIG
RTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLA
LIEYAYSRGMLQTVDLAGFDEREPDSE*

LD27988.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:37:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22421-PA 874 GF22421-PA 1..874 1..827 3204 74.2 Plus
Dana\GF14429-PA 2028 GF14429-PA 1452..1727 515..803 540 38 Plus
Dana\GF14429-PA 2028 GF14429-PA 1759..2019 532..804 529 38.7 Plus
Dana\GF23342-PA 1249 GF23342-PA 483..751 529..803 519 38 Plus
Dana\GF19443-PA 1997 GF19443-PA 1308..1559 535..802 512 37.7 Plus
Dana\GF24693-PA 1455 GF24693-PA 884..1148 531..803 501 36.7 Plus
Dana\GF24693-PA 1455 GF24693-PA 1206..1444 557..805 321 31.9 Plus
Dana\GF23342-PA 1249 GF23342-PA 775..1007 533..784 225 25.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:37:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18966-PA 833 GG18966-PA 1..833 1..827 4290 96.4 Plus
Dere\GG21203-PA 2028 GG21203-PA 1452..1727 515..803 538 38.4 Plus
Dere\GG21203-PA 2028 GG21203-PA 1759..2019 532..804 519 38 Plus
Dere\GG18436-PA 1978 GG18436-PA 1274..1525 535..802 513 37.7 Plus
Dere\GG15591-PA 1461 GG15591-PA 868..1154 514..803 501 35.7 Plus
Dere\GG18737-PA 1746 GG18737-PA 1330..1611 535..827 499 35.1 Plus
Dere\GG15591-PA 1461 GG15591-PA 1212..1450 557..805 311 31.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:37:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12435-PA 837 GH12435-PA 15..837 39..827 2958 72 Plus
Dgri\GH13826-PA 2039 GH13826-PA 1463..1738 515..803 545 39.4 Plus
Dgri\GH13826-PA 2039 GH13826-PA 1770..2030 532..804 524 38.3 Plus
Dgri\GH14309-PA 1250 GH14309-PA 461..744 517..803 518 36.7 Plus
Dgri\GH16835-PA 1424 GH16835-PA 827..1119 510..805 516 36.3 Plus
Dgri\GH12596-PA 1990 GH12596-PA 1290..1541 535..802 504 36.9 Plus
Dgri\GH16835-PA 1424 GH16835-PA 1172..1413 554..805 322 31.1 Plus
Dgri\GH14309-PA 1250 GH14309-PA 788..1000 552..784 211 25.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
Ptpmeg2-PA 827 CG32697-PA 1..827 1..827 4289 100 Plus
Ptpmeg2-PB 802 CG32697-PB 13..802 38..827 4081 99.9 Plus
Ptpmeg2-PG 790 CG32697-PG 2..790 39..827 4080 100 Plus
Ptpmeg2-PC 797 CG32697-PC 9..797 39..827 4080 100 Plus
Ptpmeg2-PF 597 CG32697-PF 1..597 231..827 3103 100 Plus
Ptpmeg2-PH 498 CG32697-PH 1..498 330..827 2593 100 Plus
Ptpmeg2-PI 498 CG32697-PI 1..498 330..827 2593 100 Plus
Ptpmeg2-PE 498 CG32697-PE 1..498 330..827 2593 100 Plus
Ptpmeg2-PD 498 CG32697-PD 1..498 330..827 2593 100 Plus
Lar-PD 1912 CG10443-PD 1336..1611 515..803 522 38.4 Plus
Lar-PH 1927 CG10443-PH 1351..1626 515..803 522 38.4 Plus
Lar-PG 1935 CG10443-PG 1359..1634 515..803 522 38.4 Plus
Lar-PI 1941 CG10443-PI 1365..1640 515..803 522 38.4 Plus
Lar-PB 2011 CG10443-PB 1435..1710 515..803 522 38.4 Plus
Lar-PA 2029 CG10443-PA 1453..1728 515..803 522 38.4 Plus
Lar-PF 2032 CG10443-PF 1456..1731 515..803 522 38.4 Plus
Ptp99A-PG 922 CG11516-PG 97..365 529..803 514 38.4 Plus
Ptp99A-PA 1226 CG11516-PA 472..740 529..803 514 38.4 Plus
Ptp99A-PC 1241 CG11516-PC 487..755 529..803 514 38.4 Plus
Ptp99A-PB 1297 CG11516-PB 472..740 529..803 514 38.4 Plus
Ptp99A-PF 1397 CG11516-PF 643..911 529..803 514 38.4 Plus
Lar-PD 1912 CG10443-PD 1643..1903 532..804 504 38 Plus
Lar-PH 1927 CG10443-PH 1658..1918 532..804 504 38 Plus
Lar-PG 1935 CG10443-PG 1666..1926 532..804 504 38 Plus
Lar-PI 1941 CG10443-PI 1672..1932 532..804 504 38 Plus
Lar-PB 2011 CG10443-PB 1742..2002 532..804 504 38 Plus
Lar-PA 2029 CG10443-PA 1760..2020 532..804 504 38 Plus
Lar-PF 2032 CG10443-PF 1763..2023 532..804 504 38 Plus
Ptp10D-PI 1558 CG1817-PI 1274..1525 535..802 488 37.7 Plus
Ptp10D-PE 1558 CG1817-PE 1274..1525 535..802 488 37.7 Plus
Ptp10D-PB 1631 CG1817-PB 1274..1525 535..802 488 37.7 Plus
Ptp10D-PH 1653 CG1817-PH 1296..1547 535..802 488 37.7 Plus
Ptp10D-PG 1990 CG1817-PG 1274..1525 535..802 488 37.7 Plus
Ptp10D-PF 1990 CG1817-PF 1274..1525 535..802 488 37.7 Plus
Ptp4E-PH 1761 CG6899-PH 1331..1612 535..827 487 34.9 Plus
Ptp69D-PB 1461 CG10975-PB 868..1154 514..803 486 34.7 Plus
Ptp69D-PA 1462 CG10975-PA 869..1155 514..803 486 34.7 Plus
Ptp4E-PB 1607 CG6899-PB 1331..1582 535..802 476 36.6 Plus
Ptp4E-PG 1615 CG6899-PG 1331..1582 535..802 476 36.6 Plus
Ptp4E-PF 1767 CG6899-PF 1331..1582 535..802 476 36.6 Plus
Ptp4E-PD 1767 CG6899-PD 1331..1582 535..802 476 36.6 Plus
Ptp4E-PC 1767 CG6899-PC 1331..1582 535..802 476 36.6 Plus
Ptp4E-PA 1767 CG6899-PA 1331..1582 535..802 476 36.6 Plus
IA-2-PD 1306 CG31795-PD 871..1230 472..827 434 33.8 Plus
IA-2-PE 1318 CG31795-PE 883..1242 472..827 434 33.8 Plus
IA-2-PC 1319 CG31795-PC 884..1243 472..827 434 33.8 Plus
Ptp52F-PB 1433 CG18243-PB 1101..1360 533..812 428 36.5 Plus
Ptp61F-PB 535 CG9181-PB 18..311 520..824 418 35.2 Plus
Ptp61F-PA 548 CG9181-PA 18..311 520..824 418 35.2 Plus
Ptp61F-PC 530 CG9181-PC 32..306 534..824 416 34.8 Plus
Ptp36E-PC 682 CG7180-PC 111..369 543..804 383 32.6 Plus
Ptp36E-PB 682 CG7180-PB 111..369 543..804 383 32.6 Plus
Ptp36E-PA 682 CG7180-PA 111..369 543..804 383 32.6 Plus
csw-PC 682 CG3954-PC 286..486 602..804 381 41 Plus
csw-PA 841 CG3954-PA 445..645 602..804 381 41 Plus
csw-PD 894 CG3954-PD 498..698 602..804 381 41 Plus
csw-PB 945 CG3954-PB 545..745 602..804 381 41 Plus
CG42327-PE 1429 CG42327-PE 1135..1419 560..805 367 33.2 Plus
Ptp69D-PB 1461 CG10975-PB 1212..1450 557..805 305 31.5 Plus
Ptp69D-PA 1462 CG10975-PA 1213..1451 557..805 305 31.5 Plus
Ptp99A-PG 922 CG11516-PG 389..610 533..773 218 25.6 Plus
Ptp99A-PA 1226 CG11516-PA 764..985 533..773 218 25.6 Plus
Ptp99A-PC 1241 CG11516-PC 779..1000 533..773 218 25.6 Plus
Ptp99A-PB 1297 CG11516-PB 764..985 533..773 218 25.6 Plus
Ptp99A-PF 1397 CG11516-PF 935..1156 533..773 218 25.6 Plus
Ptp36E-PC 682 CG7180-PC 404..673 536..804 211 23.7 Plus
Ptp36E-PB 682 CG7180-PB 404..673 536..804 211 23.7 Plus
Ptp36E-PA 682 CG7180-PA 404..673 536..804 211 23.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:38:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14758-PA 799 GI14758-PA 13..799 38..827 3132 76.1 Plus
Dmoj\GI20182-PA 2025 GI20182-PA 1449..1724 515..803 538 38 Plus
Dmoj\GI20182-PA 2025 GI20182-PA 1756..2016 532..804 529 38.7 Plus
Dmoj\GI13056-PA 1420 GI13056-PA 823..1115 510..805 524 36.9 Plus
Dmoj\GI10407-PA 1342 GI10407-PA 497..765 529..803 516 37.9 Plus
Dmoj\GI16226-PA 1656 GI16226-PA 1293..1544 535..802 502 36.9 Plus
Dmoj\GI13056-PA 1420 GI13056-PA 1169..1409 555..805 315 29.3 Plus
Dmoj\GI10407-PA 1342 GI10407-PA 809..1021 552..784 213 26.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:38:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16614-PA 825 GL16614-PA 11..825 39..827 2573 66.2 Plus
Dper\GL26255-PA 2029 GL26255-PA 1452..1727 515..803 548 38.7 Plus
Dper\GL26255-PA 2029 GL26255-PA 1759..2019 532..804 529 38.7 Plus
Dper\GL13888-PA 1213 GL13888-PA 464..732 529..803 517 38.2 Plus
Dper\GL13110-PA 906 GL13110-PA 195..446 535..802 507 37.7 Plus
Dper\GL15029-PA 915 GL15029-PA 488..739 535..802 497 36.6 Plus
Dper\GL13888-PA 1213 GL13888-PA 756..988 533..784 223 24.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:38:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22312-PA 850 GA22312-PA 1..850 1..827 3177 75.7 Plus
Dpse\GA28096-PA 2029 GA28096-PA 1452..1727 515..803 548 38.7 Plus
Dpse\GA28096-PA 2029 GA28096-PA 1759..2019 532..804 529 38.7 Plus
Dpse\GA30065-PC 1248 GA30065-PC 466..734 529..803 517 38 Plus
Dpse\GA30065-PD 1419 GA30065-PD 639..907 529..803 516 38 Plus
Dpse\GA10681-PA 1460 GA10681-PA 868..1153 514..803 511 36.5 Plus
Dpse\GA10681-PA 1460 GA10681-PA 1211..1449 557..805 310 31.1 Plus
Dpse\GA30065-PC 1248 GA30065-PC 758..990 533..784 223 24.9 Plus
Dpse\GA30065-PD 1419 GA30065-PD 931..1163 533..784 221 24.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:38:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11354-PA 802 GM11354-PA 9..802 39..827 4151 97.5 Plus
Dsec\GM18827-PA 492 GM18827-PA 108..492 433..827 1491 74.4 Plus
Dsec\GM11394-PA 492 GM11394-PA 108..492 433..827 1491 74.7 Plus
Dsec\GM18820-PA 514 GM18820-PA 108..514 433..827 1404 68.3 Plus
Dsec\GM11321-PA 353 GM11321-PA 122..349 452..684 854 73 Plus
Dsec\GM11321-PA 353 GM11321-PA 2..128 253..388 449 72.1 Plus
Dsec\GM18827-PA 492 GM18827-PA 2..128 253..388 444 72.1 Plus
Dsec\GM11394-PA 492 GM11394-PA 2..128 253..388 444 72.1 Plus
Dsec\GM18820-PA 514 GM18820-PA 2..128 253..388 444 72.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:38:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16047-PA 413 GD16047-PA 30..413 439..827 1561 76.1 Plus
Dsim\GD16044-PA 607 GD16044-PA 102..340 439..682 871 70.9 Plus
Dsim\GD16051-PA 218 GD16051-PA 46..210 88..252 865 98.2 Plus
Dsim\GD24230-PA 2043 GD24230-PA 1467..1742 515..803 538 38.4 Plus
Dsim\GD24230-PA 2043 GD24230-PA 1774..2034 532..804 520 38 Plus
Dsim\GD21436-PA 878 GD21436-PA 472..740 529..803 519 38 Plus
Dsim\GD16044-PA 607 GD16044-PA 2..152 253..417 418 58.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:38:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19159-PA 858 GJ19159-PA 21..858 24..827 3179 75.2 Plus
Dvir\GJ13567-PA 2025 GJ13567-PA 1449..1724 515..803 536 38.4 Plus
Dvir\GJ13567-PA 2025 GJ13567-PA 1756..2016 532..804 529 38.7 Plus
Dvir\GJ13803-PA 1422 GJ13803-PA 825..1117 510..805 521 36.6 Plus
Dvir\GJ14521-PA 1162 GJ14521-PA 379..647 529..803 517 37.9 Plus
Dvir\GJ15918-PA 1825 GJ15918-PA 1286..1537 535..802 504 36.9 Plus
Dvir\GJ13803-PA 1422 GJ13803-PA 1171..1411 555..805 316 29.7 Plus
Dvir\GJ14521-PA 1162 GJ14521-PA 691..903 552..784 213 26.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:38:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25577-PA 828 GK25577-PA 4..828 7..827 3230 77.2 Plus
Dwil\GK14922-PA 2033 GK14922-PA 1456..1732 515..803 534 37.9 Plus
Dwil\GK14922-PA 2033 GK14922-PA 1764..2024 532..804 525 38.3 Plus
Dwil\GK25460-PA 1388 GK25460-PA 856..1143 514..805 510 36.2 Plus
Dwil\GK25195-PA 1635 GK25195-PA 1273..1524 535..802 510 37.7 Plus
Dwil\GK12058-PA 1249 GK12058-PA 487..755 529..803 507 37.5 Plus
Dwil\GK25460-PA 1388 GK25460-PA 1199..1376 557..745 222 30.2 Plus
Dwil\GK12058-PA 1249 GK12058-PA 779..1011 533..784 222 25.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:38:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15440-PA 830 GE15440-PA 1..830 1..827 4309 97 Plus
Dyak\GE13277-PA 2028 GE13277-PA 1452..1727 515..803 538 38.4 Plus
Dyak\GE13277-PA 2028 GE13277-PA 1759..2019 532..804 520 38 Plus
Dyak\GE23851-PA 1245 GE23851-PA 484..752 529..803 518 38.2 Plus
Dyak\GE15658-PA 1970 GE15658-PA 1274..1525 535..802 512 37.7 Plus
Dyak\GE16377-PA 1768 GE16377-PA 1332..1613 535..827 505 35.1 Plus
Dyak\GE23851-PA 1245 GE23851-PA 776..1008 533..784 221 24.9 Plus

LD27988.hyp Sequence

Translation from 159 to 2642

> LD27988.hyp
MQQTQWNKDRQEDRNNNSGSRSEQDSGCHRRLFLCIAKAVKQFIDLCNNL
GANCSTTTATSPSTSSSSASSTQNLIAVVPPQLQQLQVQLPAPGGGGGAG
AGGGGGGGGGAAPVRRHISHTTAVKFLYARKFDIPRAVSLYEQHEQIRLK
EYLYNIDPDVEPLRSELQTGKFTILPARTSSGAAIALFTANRHSPLSVSH
TTTLQGIVYQLDSALQDSETQRAGLVFIYDMSGSKYSNFDYDLSQKILTL
LKGGYPARLKKVLIVTAPLWFKAPFKILRLFVREKLRERVFTVSVPQLAL
HVPRKALPIHLGGTLEVDHATWLLSCRQSMTNREDELLANIVGVGGGSGS
GSAAGSAAIVSTNGTETEAATTAATIISAVHQLGDNNTTVVTVSNGVGPA
GSASGGATTAASAATEPNENITINGLSPSHRQAANNSSSSSSSAATVANP
LKLNTSGSADNNSTITNATTAAGAAGAAAGTTTNGGGEFWSENPPSSASS
GFSDDDSLAGQEGDPKPIDQIVQMVKQRGRHGLIKEYADIRNRAPEGTFL
HARMRANLTKNRYTDVLCYDHSRVVLAHEDGDEPSDYINANFVDGYKQKN
AYISTQGPLPKTSQDFWRMIWEQHCLVIVMTTRVMERGRVKCGQYWEPTE
ESSLEFGDYHVRTISVECNEDYMVASLELRNIKTDEIRNVSHWQFTSWPD
YGVPSSAMAMLNFLQKVREKQAQLVQGLGDTWAGHPRGPPIVVHCSAGIG
RTGTFITLDICISRLEDVGTADIRGTVEKIRSQRAYSIQMPDQYVFCHLA
LIEYAYSRGMLQTVDLAGFDEREPDSE*

LD27988.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:16:23
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0232-PA 827 CG32697-PA 1..827 1..827 4289 100 Plus
l(1)G0232-PB 802 CG32697-PB 13..802 38..827 4081 99.9 Plus
l(1)G0232-PG 790 CG32697-PG 2..790 39..827 4080 100 Plus
l(1)G0232-PC 797 CG32697-PC 9..797 39..827 4080 100 Plus
l(1)G0232-PF 597 CG32697-PF 1..597 231..827 3103 100 Plus