Clone LD28033 Report

Search the DGRC for LD28033

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:280
Well:33
Vector:pOT2
Associated Gene/Transcriptlola-RD
Protein status:LD28033.pep: gold
Preliminary Size:3332
Sequenced Size:3419

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12052 2001-09-19 Blastp of sequenced clone
lola 2008-04-29 Release 5.5 accounting
lola 2008-08-15 Release 5.9 accounting
lola 2008-12-18 5.12 accounting

Clone Sequence Records

LD28033.complete Sequence

3419 bp (3419 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058586

> LD28033.complete
TGCGCTCGGGGATTTTGTTTGGTTCTCTGCTCTGTGCGGCAGATCGCGAG
GCAACGCGTGCGGTTTGCTGGCTAAATTCTACATATACACATTCAACATC
CGACGGCCGAAGCGGAGCTAGAATAGGAAAACCAACCTTTGCAGTGCTAA
TTATTTACAACACAACACATAACTGCTGACACACTAAACAAAACTGAAAA
AAGAACCAAGGGCGAAAGCTGTTTATTTTGTTTAGGCACCTAAGTTTGGC
CAAATTATAATCAAAAAACGAGTGGCGAAAAAAACAGCAAGTCAGAGAGA
GCGCTCGACGTTCGGCCCCAAGGTCGTGGGCCCAAACCCCCAGGATCCAT
TTCCAACAACCCCATCCAACCACCCGAGAAACCAGAATGGATGACGATCA
GCAGTTTTGTTTGCGGTGGAACAACCACCAGAGCACACTGATCAGCGTGT
TCGACACGTTGCTGGAGAACGAGACTCTAGTCGATTGCACGCTAGCCGCC
GAGGGCAAATTTCTCAAGGCCCACAAGGTGGTGCTGTCAGCATGCAGTCC
CTACTTTGCTACCTTACTACAAGAACAGTACGACAAACATCCCATCTTTA
TACTCAAGGATGTCAAGTACCAAGAGCTGCGCGCCATGATGGACTACATG
TACCGCGGCGAGGTCAATATCTCGCAGGATCAGCTGGCCGCTCTGCTCAA
GGCCGCCGAATCGCTTCAGATCAAGGGCCTTTCGGACAATCGCACTGGCG
GCGGAGTAGCTCCCAAGCCAGAGTCCTCCGGCCATCATCGCGGCGGTAAG
CTGAGCGGTGCCTACACACTGGAGCAAACTAAGCGGGCTCGACTGGCCAC
CGGCGGAGCGATGGATACGTCTGGCGATGTGTCCGGTTCGCGCGAGGGCT
CCTCGAGTCCGTCGCGTCGTCGCCGAAAAGTCCGACGTCGCAGCATGGAG
AATGATGCCCACGACAACTCAAACTCGTCCGTGTTACAAGCCGCCGCCTC
GAATCAGTCAATCCTCCAGCAGACAGGGGCCGGTTTGGCCGTCTCCGCTT
TGGTCACCACCCAGTTGTCCAGCGGACCGGCAGCCGGAACCAGCAGCCAA
GCGTCGTCGACCCAACAACAGCAGCCATTGACCAGCACCAACGTTACCAA
AAAGACTGAAAGCGCTAAACTAACATCCTCGACAGCCGCCCCAGCGAGCG
GAGCATCTGCGTCAGCGGCTGTACAACAGGCCCATCTGCATCAGCAGCAG
GCGCAGACCACAAGCGATGCCATTAACACCGAGAATGTACAAGCCCAGAG
CCAAGGTGGCGCCCAAGGCGTCCAAGGCGATGACGAGGACATTGATGAGG
GTAGTGCCGTTGGCGGACCAAACTCGGCCACCGGACCCAATCCCGCCTCC
GCCTCTGCATCCGCCGTCCATGCCGGAGTTGTGGTAAAGCAGCTGGCCAG
CGTTGTGGACAAATCGTCGTCGAATCACAAACATAAGATCAAAGACAACA
GCGTGTCATCAGTGGGCTCCGAAATGGTTATTGAACCCAAAGCCGAATAC
GATGACGATGCGCACGATGAGAATGTTGAGGATTTGACACTGGACGAGGA
GGACATGACAATGGAGGAGCTGGACCAGACGGCCGGCACCAGCCAGGGTG
GCGAAGGATCTAGTCAAACATATGCAACATGGCAGCACGACAGATCTCAG
GATGAACTTGGACTAATGGCACAGGATGCACAGCAACGGGATCCCCAAGA
CCTGAAGTACGACTACAAGCACAGCATTTTTGGCAGCGATGATGCGGATC
AGGATCAATACAAGGAGCGTTTCCACTGCGCCGTCTGCAACAAGAGTTAT
CTCCGCAAGCGCCATCTGCAGCGCCATATGCGCGATGAATGCATTGGCAT
TCCGCCACGATTCAATTGCGAGTTTTGCAGCTCTCGATTCCGTCGCAAGT
ACCACATGGTGCGCCATTTGGTCTCCAAGCACGGTATTCCGCCGGCAATT
GCACAGATGACAACGGGCAGTGGTTCGCGTTCCTCTATCAGCGGCTCGCT
AGACCTAAAGTCTGGCGGCGGATTAGCTGGTCTTCAGCAGATGGGTGGTG
GCGGCGCCGGAGGCGGCGGCTCTACCGGTGATTGTGGGGCAAGTGTGGGC
AGTGCTGGATCCCATAATGGCTGCGAGAGTCCCATACCAGAGAACCTGTC
GCTGCGCAAGGAGAACTACGAAAACGAGAATCTTTCGGGCTCGCGGTGCA
CTTCGCCACTGCCACCGCACATTATGCCGATACCCACGTATGGGTTGACA
GGTGCCATCACTGCGATCTCTGCCGCAGCAGCCGTGGTCGAGGAGCAAGC
AGCGGCAGCAGCAGCAGCTGCGGCCATCGCTGAGGCTCAAGCCAAGAACA
ACAATGAATCCGGAGGAGGAAGATCCGAAGTCGATGACGAAGACGAGACA
TTGGCCGCACAAGCCGAGGCTGTCGCAGCTCTCGGCATCAAGCCGGAACC
GGTGACGCCCAGCAAGGTGCAGCACCTGATGAACGAGGAGTGGAACATGA
AGCTGGGCCTACAGATCATATCGAATTCATTGCTCAAGGAGCGATTGATG
AACACTATGCCATTTGCTTATAACAACAACTAAAGCTCTTTCTAGCTATT
TATATTATTTATTGAAACGTAAAGAATCTCTCAATTTTTTTAATTTGTCA
AGAGCCAAGGCTCTGCGTATTTGCATACTGTATTCATACGTTTTCGCCCC
CCAAGCCCACCCCTTTTTTACACTATGTATTTGCCCTGTACGAGAATCTC
AAACGTAGACATTCCATTTTGAAGATAATTTTAATTATGTATTTTTTTGA
GTCGCCCGTAGACAAAATGTGTCTTAAAATTTGTCAATATTACAGTGTTG
AATCATCCAACGGATCTTTCCTAAGACGAACGATAACTAACTCGAAACGT
CACGAATTTCTAAACATATAAGACGCTTTCAGCATGACAGGGATGGGATT
ACTTTACCCAAAAAGAGTCCAGCATCTAAACTATTTGTTAGTCATTTAAG
ATGAAACCAAAAAAAAGTCAAGAGAGAATATCAAATCTTTTTACTACAAG
TTGAGTAATTTCAATTTGATTTAATCCAAAAAAATGCAAAATACTCAACT
GGCCACCTAACTTTTCTCTTGCAAAATGGAGGAAGCCATGGGAGGTTGAT
TTATTAAATGTAACGCACTTATTCCAAATGATATGCCACCAAAATGTACG
ACCTAGTTAAGTTATTACTATACTATACATTTCTAGCATGTATACTTAAT
TTTAAAGCCTAATTTATCCAAAGTCAAAACGAAACAGAAATGAGAATTAT
ATTTTAATTGAATAAATTACGAAAACACCAAATACACAAAAAATATACTA
TAAAAAAAAAAAAAAAAAA

LD28033.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:19:24
Subject Length Description Subject Range Query Range Score Percent Strand
lola-RD 3407 lola-RD 1..3402 1..3402 17010 100 Plus
lola-RE 3420 lola-RE 180..3415 167..3402 16180 100 Plus
lola-RA 2899 lola-RA 14..1767 1..1754 8755 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 10:40:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 6407180..6408833 3401..1748 8130 99.7 Minus
chr2R 21145070 chr2R 6419760..6420474 1668..954 3560 99.9 Minus
chr2R 21145070 chr2R 6420696..6421089 954..561 1970 100 Minus
chr2R 21145070 chr2R 6421154..6421546 560..168 1965 100 Minus
chr2R 21145070 chr2R 6422425..6422591 167..1 835 100 Minus
chr2R 21145070 chr2R 6419615..6419695 1749..1669 405 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:20:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 10:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10519625..10521279 3402..1748 8275 100 Minus
2R 25286936 2R 10532181..10532895 1668..954 3575 100 Minus
2R 25286936 2R 10533118..10533511 954..561 1970 100 Minus
2R 25286936 2R 10533576..10533968 560..168 1965 100 Minus
2R 25286936 2R 10534850..10535016 167..1 835 100 Minus
2R 25286936 2R 10532039..10532119 1749..1669 405 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 10520824..10522478 3402..1748 8275 100 Minus
2R 25260384 2R 10533380..10534094 1668..954 3575 100 Minus
2R 25260384 2R 10534317..10534710 954..561 1970 100 Minus
2R 25260384 2R 10534775..10535167 560..168 1965 100 Minus
2R 25260384 2R 10536049..10536215 167..1 835 100 Minus
2R 25260384 2R 10533238..10533318 1749..1669 405 100 Minus
Blast to na_te.dros performed on 2019-03-16 10:40:43 has no hits.

LD28033.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 10:41:30 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 6407180..6408831 1750..3401 99 <- Minus
chr2R 6419615..6419695 1669..1749 100 <- Minus
chr2R 6419760..6420473 955..1668 99 <- Minus
chr2R 6420696..6421089 561..954 100 <- Minus
chr2R 6421154..6421546 168..560 100 <- Minus
chr2R 6422425..6422591 1..167 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:55:51 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RE 1..2247 387..2633 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:02:27 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RE 1..2247 387..2633 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 12:17:24 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RD 1..2247 387..2633 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:32:58 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RE 1..2247 387..2633 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:14:40 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RD 1..2247 387..2633 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:55:43 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RD 1..3401 1..3401 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:02:27 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RD 63..3463 1..3401 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 12:17:24 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RD 17..3417 1..3401 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:32:58 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RD 1..3401 1..3401 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:14:40 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
lola-RD 17..3417 1..3401 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:41:30 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10519626..10521277 1750..3401 100 <- Minus
2R 10532039..10532119 1669..1749 100 <- Minus
2R 10532181..10532894 955..1668 100 <- Minus
2R 10533118..10533511 561..954 100 <- Minus
2R 10533576..10533968 168..560 100 <- Minus
2R 10534850..10535016 1..167 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:41:30 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10519626..10521277 1750..3401 100 <- Minus
2R 10532039..10532119 1669..1749 100 <- Minus
2R 10532181..10532894 955..1668 100 <- Minus
2R 10533118..10533511 561..954 100 <- Minus
2R 10533576..10533968 168..560 100 <- Minus
2R 10534850..10535016 1..167 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 10:41:30 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10519626..10521277 1750..3401 100 <- Minus
2R 10532039..10532119 1669..1749 100 <- Minus
2R 10532181..10532894 955..1668 100 <- Minus
2R 10533118..10533511 561..954 100 <- Minus
2R 10533576..10533968 168..560 100 <- Minus
2R 10534850..10535016 1..167 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 12:17:24 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6407131..6408782 1750..3401 100 <- Minus
arm_2R 6419544..6419624 1669..1749 100 <- Minus
arm_2R 6419686..6420399 955..1668 100 <- Minus
arm_2R 6420623..6421016 561..954 100 <- Minus
arm_2R 6421081..6421473 168..560 100 <- Minus
arm_2R 6422355..6422521 1..167 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:09:41 Download gff for LD28033.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10520825..10522476 1750..3401 100 <- Minus
2R 10534317..10534710 561..954 100 <- Minus
2R 10533238..10533318 1669..1749 100 <- Minus
2R 10533380..10534093 955..1668 100 <- Minus
2R 10534775..10535167 168..560 100 <- Minus
2R 10536049..10536215 1..167 100   Minus

LD28033.pep Sequence

Translation from 386 to 2632

> LD28033.pep
MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVL
SACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQL
AALLKAAESLQIKGLSDNRTGGGVAPKPESSGHHRGGKLSGAYTLEQTKR
ARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNSNSSVL
QAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTS
TNVTKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQAQTTSDAINTEN
VQAQSQGGAQGVQGDDEDIDEGSAVGGPNSATGPNPASASASAVHAGVVV
KQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDL
TLDEEDMTMEELDQTAGTSQGGEGSSQTYATWQHDRSQDELGLMAQDAQQ
RDPQDLKYDYKHSIFGSDDADQDQYKERFHCAVCNKSYLRKRHLQRHMRD
ECIGIPPRFNCEFCSSRFRRKYHMVRHLVSKHGIPPAIAQMTTGSGSRSS
ISGSLDLKSGGGLAGLQQMGGGGAGGGGSTGDCGASVGSAGSHNGCESPI
PENLSLRKENYENENLSGSRCTSPLPPHIMPIPTYGLTGAITAISAAAAV
VEEQAAAAAAAAAIAEAQAKNNNESGGGRSEVDDEDETLAAQAEAVAALG
IKPEPVTPSKVQHLMNEEWNMKLGLQIISNSLLKERLMNTMPFAYNNN*

LD28033.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 11:04:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11096-PA 562 GF11096-PA 1..554 1..530 1763 74 Plus
Dana\GF22979-PA 648 GF22979-PA 6..118 5..117 428 61.9 Plus
Dana\GF10081-PA 995 GF10081-PA 104..216 5..117 422 58.4 Plus
Dana\GF10078-PA 1088 GF10078-PA 194..314 3..123 413 55.4 Plus
Dana\GF24270-PA 746 GF24270-PA 4..119 5..120 407 62.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 11:04:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22728-PA 610 GG22728-PA 1..456 1..455 2362 98.5 Plus
Dere\GG22730-PA 505 GG22730-PA 209..505 456..748 1180 89.9 Plus
Dere\GG11824-PA 813 GG11824-PA 6..118 5..117 428 61.9 Plus
Dere\GG14626-PA 528 GG14626-PA 100..212 5..117 423 58.4 Plus
Dere\GG14622-PA 1074 GG14622-PA 196..316 3..123 410 54.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 11:04:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20621-PA 1032 GH20621-PA 1..491 1..469 1383 67.4 Plus
Dgri\GH18647-PA 680 GH18647-PA 4..131 5..128 432 58.6 Plus
Dgri\GH15669-PA 517 GH15669-PA 118..228 7..117 406 57.7 Plus
Dgri\GH15666-PA 655 GH15666-PA 206..324 3..121 404 55.5 Plus
Dgri\fru-PA 926 GH19217-PA 89..203 4..118 399 56.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:50
Subject Length Description Subject Range Query Range Score Percent Strand
lola-PE 748 CG12052-PE 1..748 1..748 3829 100 Plus
lola-PD 748 CG12052-PD 1..748 1..748 3829 100 Plus
lola-PU 575 CG12052-PU 1..560 1..566 2367 85.7 Plus
lola-PT 575 CG12052-PT 1..560 1..566 2367 85.7 Plus
lola-PY 577 CG12052-PY 1..511 1..527 2349 90.1 Plus
lola-PK 546 CG12052-PK 1..537 1..546 2348 86.5 Plus
lola-PF 565 CG12052-PF 1..557 1..530 2343 86.1 Plus
lola-PA 706 CG12052-PA 1..603 1..553 2339 80.2 Plus
lola-PO 668 CG12052-PO 1..582 1..532 2314 82 Plus
lola-PZ 665 CG12052-PZ 1..460 1..460 2299 99.3 Plus
lola-PI 970 CG12052-PI 1..469 1..469 2297 97.7 Plus
lola-PX 602 CG12052-PX 1..464 1..464 2297 98.3 Plus
lola-PAA 970 CG12052-PAA 1..469 1..469 2297 97.7 Plus
lola-PB 787 CG12052-PB 1..456 1..456 2296 100 Plus
lola-PC 787 CG12052-PC 1..456 1..456 2296 100 Plus
lola-PR 891 CG12052-PR 1..456 1..456 2296 100 Plus
lola-PG 891 CG12052-PG 1..456 1..456 2296 100 Plus
lola-PV 549 CG12052-PV 1..456 1..456 2293 99.8 Plus
lola-PW 771 CG12052-PW 1..455 1..455 2292 100 Plus
lola-PH 518 CG12052-PH 1..455 1..455 2292 100 Plus
lola-PQ 603 CG12052-PQ 1..455 1..455 2292 100 Plus
lola-PP 963 CG12052-PP 1..455 1..455 2292 100 Plus
lola-PJ 757 CG12052-PJ 1..455 1..455 2292 100 Plus
lola-PL 608 CG12052-PL 1..456 1..456 2289 99.8 Plus
lola-PM 465 CG12052-PM 1..454 1..454 2286 100 Plus
fru-PF 688 CG14307-PF 2..622 4..599 423 26.3 Plus
fru-PB 789 CG14307-PB 103..723 4..599 423 26.3 Plus
BtbVII-PI 747 CG43365-PI 4..569 5..613 405 25.5 Plus
mamo-PC 799 CG45477-PC 4..359 5..415 404 30.6 Plus
mamo-PD 1087 CG45477-PD 4..359 5..415 404 30.6 Plus
mamo-PE 1087 CG45477-PE 4..359 5..415 404 30.6 Plus
mamo-PG 1109 CG45477-PG 4..359 5..415 404 30.6 Plus
mamo-PF 1109 CG45477-PF 4..359 5..415 404 30.6 Plus
mamo-PH 1553 CG45477-PH 4..359 5..415 404 30.6 Plus
mamo-PI 1553 CG45477-PI 4..359 5..415 404 30.6 Plus
BtbVII-PE 743 CG43365-PE 4..340 5..322 403 31.6 Plus
BtbVII-PD 743 CG43365-PD 4..340 5..322 403 31.6 Plus
BtbVII-PB 743 CG11494-PB 4..340 5..322 403 31.6 Plus
BtbVII-PA 743 CG11494-PA 4..340 5..322 403 31.6 Plus
BtbVII-PG 816 CG43365-PG 4..340 5..322 403 31.6 Plus
BtbVII-PF 907 CG43365-PF 4..340 5..322 403 31.6 Plus
fru-PH 695 CG14307-PH 2..638 4..674 401 25.2 Plus
fru-PK 705 CG14307-PK 12..648 4..674 401 25.2 Plus
fru-PG 796 CG14307-PG 103..739 4..674 401 25.2 Plus
fru-PO 882 CG14307-PO 2..638 4..674 401 25.2 Plus
fru-PA 516 CG14307-PA 2..313 4..342 400 32.9 Plus
fru-PD 665 CG14307-PD 2..313 4..342 400 32.9 Plus
fru-PC 854 CG14307-PC 2..313 4..342 400 32.9 Plus
fru-PM 854 CG14307-PM 2..313 4..342 400 32.9 Plus
fru-PL 854 CG14307-PL 2..313 4..342 400 32.9 Plus
fru-PI 870 CG14307-PI 18..329 4..342 400 32.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 11:04:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20175-PA 626 GI20175-PA 1..454 1..456 1398 70.8 Plus
Dmoj\GI20178-PA 318 GI20178-PA 1..318 455..748 868 69.6 Plus
Dmoj\GI23126-PA 653 GI23126-PA 6..133 5..128 433 58.6 Plus
Dmoj\GI12711-PA 539 GI12711-PA 130..240 7..117 412 58.6 Plus
Dmoj\GI12710-PA 1127 GI12710-PA 186..300 3..117 408 56.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 11:04:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17189-PA 680 GL17189-PA 1..460 1..463 1781 84.5 Plus
Dper\GL17191-PA 228 GL17191-PA 1..177 498..681 588 78.4 Plus
Dper\GL18715-PA 129 GL18715-PA 3..112 4..113 433 71.8 Plus
Dper\GL23993-PA 415 GL23993-PA 6..118 5..117 430 61.9 Plus
Dper\GL23182-PA 258 GL23182-PA 2..116 4..118 393 56.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 11:04:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA30442-PT 741 GA30442-PT 1..741 1..748 2820 80.4 Plus
Dpse\GA30442-PN 741 GA30442-PN 1..741 1..748 2820 80.4 Plus
Dpse\GA30442-PJ 554 GA30442-PJ 1..528 1..532 1844 78 Plus
Dpse\GA30442-PL 543 GA30442-PL 1..534 1..544 1840 75.4 Plus
Dpse\GA30442-PU 558 GA30442-PU 1..550 1..530 1836 75.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 11:04:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20503-PA 612 GM20503-PA 1..457 1..455 2340 98.5 Plus
Dsec\GM20506-PA 254 GM20506-PA 1..254 498..748 884 79.3 Plus
Dsec\GM16442-PA 643 GM16442-PA 6..118 5..117 428 62.8 Plus
Dsec\GM14240-PA 541 GM14240-PA 100..212 5..117 423 58.4 Plus
Dsec\GM14235-PA 575 GM14235-PA 196..314 5..123 404 54.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 11:04:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\lola-PA 671 GD25965-PA 59..516 1..455 2349 98.7 Plus
Dsim\GD25968-PA 261 GD25968-PA 1..151 498..648 815 98.7 Plus
Dsim\ttk-PA 813 GD21596-PA 6..118 5..117 430 62.8 Plus
Dsim\GD13495-PA 1066 GD13495-PA 196..314 5..123 401 54.6 Plus
Dsim\fru-PA 1021 GD20167-PA 167..281 4..118 395 55.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 11:04:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20132-PA 998 GJ20132-PA 1..470 1..469 1394 71 Plus
Dvir\GJ23100-PA 654 GJ23100-PA 4..131 5..128 430 58.6 Plus
Dvir\GJ12698-PA 524 GJ12698-PA 108..220 5..117 423 59.3 Plus
Dvir\GJ12695-PA 635 GJ12695-PA 189..303 3..117 412 57.4 Plus
Dvir\fru-PA 942 GJ10825-PA 89..203 4..118 395 55.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 11:04:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK10673-PA 1051 GK10673-PA 1..439 1..454 1525 74.5 Plus
Dwil\GK10674-PA 969 GK10674-PA 1..197 456..639 554 65.5 Plus
Dwil\GK12114-PA 799 GK12114-PA 6..133 5..128 422 56.2 Plus
Dwil\GK16863-PA 1092 GK16863-PA 111..223 5..117 420 59.3 Plus
Dwil\GK16859-PA 530 GK16859-PA 52..166 3..117 409 57.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 11:04:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13086-PA 610 GE13086-PA 1..456 1..455 2320 97.6 Plus
Dyak\GE13089-PA 686 GE13089-PA 396..686 456..748 1251 94.2 Plus
Dyak\ttk-PA 813 GE10957-PA 6..118 5..117 428 61.9 Plus
Dyak\bab1-PA 542 GE20985-PA 100..212 5..117 424 58.4 Plus
Dyak\GE20983-PA 1072 GE20983-PA 201..321 3..123 410 54.5 Plus

LD28033.hyp Sequence

Translation from 386 to 2632

> LD28033.hyp
MDDDQQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVL
SACSPYFATLLQEQYDKHPIFILKDVKYQELRAMMDYMYRGEVNISQDQL
AALLKAAESLQIKGLSDNRTGGGVAPKPESSGHHRGGKLSGAYTLEQTKR
ARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNSNSSVL
QAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTS
TNVTKKTESAKLTSSTAAPASGASASAAVQQAHLHQQQAQTTSDAINTEN
VQAQSQGGAQGVQGDDEDIDEGSAVGGPNSATGPNPASASASAVHAGVVV
KQLASVVDKSSSNHKHKIKDNSVSSVGSEMVIEPKAEYDDDAHDENVEDL
TLDEEDMTMEELDQTAGTSQGGEGSSQTYATWQHDRSQDELGLMAQDAQQ
RDPQDLKYDYKHSIFGSDDADQDQYKERFHCAVCNKSYLRKRHLQRHMRD
ECIGIPPRFNCEFCSSRFRRKYHMVRHLVSKHGIPPAIAQMTTGSGSRSS
ISGSLDLKSGGGLAGLQQMGGGGAGGGGSTGDCGASVGSAGSHNGCESPI
PENLSLRKENYENENLSGSRCTSPLPPHIMPIPTYGLTGAITAISAAAAV
VEEQAAAAAAAAAIAEAQAKNNNESGGGRSEVDDEDETLAAQAEAVAALG
IKPEPVTPSKVQHLMNEEWNMKLGLQIISNSLLKERLMNTMPFAYNNN*

LD28033.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:15
Subject Length Description Subject Range Query Range Score Percent Strand
lola-PE 748 CG12052-PE 1..748 1..748 3829 100 Plus
lola-PD 748 CG12052-PD 1..748 1..748 3829 100 Plus
lola-PU 575 CG12052-PU 1..560 1..566 2367 85.7 Plus
lola-PT 575 CG12052-PT 1..560 1..566 2367 85.7 Plus
lola-PY 577 CG12052-PY 1..511 1..527 2349 90.1 Plus