BDGP Sequence Production Resources |
Search the DGRC for LD28119
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 281 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10898-RA |
Protein status: | LD28119.pep: gold |
Preliminary Size: | 1937 |
Sequenced Size: | 1950 |
Gene | Date | Evidence |
---|---|---|
CG10898 | 2001-01-01 | Release 2 assignment |
CG10898 | 2001-12-12 | Blastp of sequenced clone |
CG10898 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10898 | 2008-04-29 | Release 5.5 accounting |
CG10898 | 2008-08-15 | Release 5.9 accounting |
CG10898 | 2008-12-18 | 5.12 accounting |
1950 bp (1950 high quality bases) assembled on 2001-12-12
GenBank Submission: AY070551
> LD28119.complete CGCACTTGCAAATCAATTAGGCCATAAATGGCATTGCAATAAATGAGTGT GCACCACCTAATGACCCATCGATAAACGGAGCTGTTAAGTACCGCGACGA GAAGAATAGCGAACAGCTGGCGCAGACGGAGACGGAGACACATTCCGATG CACTTTCTCCTGAAGAAAACCCGTCGAGCGGCTTATTTGACATCCATTTC GATATCAATACAGAGAAATAGAGAGAAATAGCAAGAAATAGAGGCCACAG CACCACCAGCCAGCCACCTGTGTAGCGACAACAAGCGACGAGCTGCAAAA ACAACAACAAAAAGTTGATTGCCATCGTCTTGGCCATTTTATTGGGCATT ATAGCCGCAGTCAGTCACATACCGCCCGTTCTCGAGTTCGCCACGATTGC TTAAACTGTTTGCGTTTGCAGAGCACAGAGCACTCCAAAGAATTCGTAAT TTGCATATATAGAACCTCAGAGATATATGCAGAGATTCCGACTGGGCGTA GCATGTTCAGCGAACTGAGTCAGCCGCCTTGAAATTTAGCGCTTAAACAA AACAGGATGGCTTCGATTGTGGAGAAAGTGCGTCGCATTTTGGACTCAAA AGATCTGGGCGACATCACAACGGAACTGTGTGACTTTTCTCTTAAGGAAC AGAATGCCACCGCCGAGGCCCAGGGAGTACAGCCCTCATCCGCATCCGAT TTTGTGCCCATTCTTGGACAGACAGTCACCTATATTGTGGCCTGTGTGTT GATCAATGAGCACGACGAGCTTCTGATGATCGAGGAGGCCAAACAGAGCT GTGCCGGCAAGTGGTACTTACCCGCTGGTCGCATGGAAAGGGGCGAATCC ATCACGGAGGCAGCCGCCCGGGAAGTTTTCGAAGAGACTGGTCTAAATGC CGAGCTGACCACTCTATTAGCGGTGGAGGCCGCCGGTGGCTCTTGGTTCC GCTTCGTGCTCACTGGACGCATCACAGGCGGCCGACTTAAAACTCCTGCG GATGCAGACGCCGAATCGATTCAGGCGAGATGGGTGCGTAATCCCAAGGA AGTACCTCTCCGAGCCAACGACATACTCAGTATCATTGAGATTGGAAGGG CGTATCATCAGGGGCAAAAGATTGCCATTAGCCCTTCACCCTGGCATGGG ACCATACTGCCCACACGTTTCGCCCACAAACGTAACTATCTGCGGGTTCT GGCTGTAGCCAGAAAGCGAGCACACAACTCGCTGAACATCCTGGTCAGTG AAAAGAACGCCCACCACTTTCCCACGGTCGAACTGCATCCGAATCGCAGC CTGCACTCTACGCTGCGCAAGTTCATGATTGAGATTTTTGGTGCGGAGCT GCCACAGCATCGACCACATGGCTTACTTAGCGTGGAGCACTCAGCTTCGG AGCAGGAGAACACTGATGGAATATGCCTTAATCTGCTGGTGGCTTTCCGA CCGCCACTGGAGGAAATCTCGCTGATCGGCAAGTGCATTTGGCAGGAACT GGGTGCGCCACTTGACGAGATGCTGGGACGTATCGTCAGCAGCAAGAACG CATCCATTCCGCTGAATGTGGTGCGCTAAAATGCCTTAGACTAGAGTAAT CTGTCCTTATTTATGGTGCAAGCAATCTATCCGTTGTTAGTTGCAATTAA AGATAGCAGATGTCTGCCAGATGTCCGACTGTAAGGCAAATGTTTCCCTC CTTGGTGCTAAATAGTGAATTACGTAGATAAGTCTCTGCCAATCTGTCAT AAAACGCCTAGAAGTAATCTTAACCTCTTAACCCATTCCCCTTTCTTGGT GAAAGATCTAATCTGAAGTTTACTCGTTTGCGTAGCCTAATCTATTCTAG AGATTTACTTAGAAAACTGTTTACTATTATATAGTACCAATTAAAATATT CACGTTTTCATGCGAACTAAATAATCCAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10898-RA | 2059 | CG10898-RA | 133..2059 | 1..1927 | 9635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 7384244..7385365 | 806..1927 | 5610 | 100 | Plus |
chr3R | 27901430 | chr3R | 7383306..7383852 | 1..547 | 2735 | 100 | Plus |
chr3R | 27901430 | chr3R | 7383914..7384173 | 548..807 | 1300 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 11558756..11559882 | 806..1932 | 5635 | 100 | Plus |
3R | 32079331 | 3R | 11557818..11558364 | 1..547 | 2735 | 100 | Plus |
3R | 32079331 | 3R | 11558426..11558685 | 548..807 | 1300 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 11299587..11300713 | 806..1932 | 5635 | 100 | Plus |
3R | 31820162 | 3R | 11298649..11299195 | 1..547 | 2735 | 100 | Plus |
3R | 31820162 | 3R | 11299257..11299516 | 548..807 | 1300 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2274..2434 | 162..312 | 139 | 60.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 7383306..7383852 | 1..547 | 100 | -> | Plus |
chr3R | 7383914..7384172 | 548..806 | 100 | -> | Plus |
chr3R | 7384245..7385365 | 807..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 1..1023 | 557..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 1..1023 | 557..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 1..1023 | 557..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 1..1023 | 557..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 1..1023 | 557..1579 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 90..2016 | 1..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 90..2016 | 1..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 90..2016 | 1..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 90..2016 | 1..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10898-RA | 43..1969 | 1..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11557818..11558364 | 1..547 | 100 | -> | Plus |
3R | 11558426..11558684 | 548..806 | 100 | -> | Plus |
3R | 11558757..11559877 | 807..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11557818..11558364 | 1..547 | 100 | -> | Plus |
3R | 11558426..11558684 | 548..806 | 100 | -> | Plus |
3R | 11558757..11559877 | 807..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11557818..11558364 | 1..547 | 100 | -> | Plus |
3R | 11558426..11558684 | 548..806 | 100 | -> | Plus |
3R | 11558757..11559877 | 807..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 7383540..7384086 | 1..547 | 100 | -> | Plus |
arm_3R | 7384148..7384406 | 548..806 | 100 | -> | Plus |
arm_3R | 7384479..7385599 | 807..1927 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 11298649..11299195 | 1..547 | 100 | -> | Plus |
3R | 11299257..11299515 | 548..806 | 100 | -> | Plus |
3R | 11299588..11300708 | 807..1927 | 100 | Plus |
Translation from 556 to 1578
> LD28119.hyp MASIVEKVRRILDSKDLGDITTELCDFSLKEQNATAEAQGVQPSSASDFV PILGQTVTYIVACVLINEHDELLMIEEAKQSCAGKWYLPAGRMERGESIT EAAAREVFEETGLNAELTTLLAVEAAGGSWFRFVLTGRITGGRLKTPADA DAESIQARWVRNPKEVPLRANDILSIIEIGRAYHQGQKIAISPSPWHGTI LPTRFAHKRNYLRVLAVARKRAHNSLNILVSEKNAHHFPTVELHPNRSLH STLRKFMIEIFGAELPQHRPHGLLSVEHSASEQENTDGICLNLLVAFRPP LEEISLIGKCIWQELGAPLDEMLGRIVSSKNASIPLNVVR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10898-PA | 340 | CG10898-PA | 1..340 | 1..340 | 1743 | 100 | Plus |
Translation from 556 to 1578
> LD28119.pep MASIVEKVRRILDSKDLGDITTELCDFSLKEQNATAEAQGVQPSSASDFV PILGQTVTYIVACVLINEHDELLMIEEAKQSCAGKWYLPAGRMERGESIT EAAAREVFEETGLNAELTTLLAVEAAGGSWFRFVLTGRITGGRLKTPADA DAESIQARWVRNPKEVPLRANDILSIIEIGRAYHQGQKIAISPSPWHGTI LPTRFAHKRNYLRVLAVARKRAHNSLNILVSEKNAHHFPTVELHPNRSLH STLRKFMIEIFGAELPQHRPHGLLSVEHSASEQENTDGICLNLLVAFRPP LEEISLIGKCIWQELGAPLDEMLGRIVSSKNASIPLNVVR*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18377-PA | 340 | GF18377-PA | 1..340 | 1..340 | 1646 | 90.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18222-PA | 340 | GG18222-PA | 1..340 | 1..340 | 1774 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17327-PA | 345 | GH17327-PA | 1..345 | 1..340 | 1511 | 81.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10898-PA | 340 | CG10898-PA | 1..340 | 1..340 | 1743 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10291-PA | 346 | GI10291-PA | 1..346 | 1..340 | 1541 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12379-PA | 345 | GL12379-PA | 1..345 | 1..340 | 1603 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10624-PA | 345 | GA10624-PA | 1..345 | 1..340 | 1605 | 87.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23952-PA | 340 | GM23952-PA | 1..340 | 1..340 | 1794 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18763-PA | 340 | GD18763-PA | 1..340 | 1..340 | 1801 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11098-PA | 346 | GJ11098-PA | 1..346 | 1..340 | 1520 | 81.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11300-PA | 346 | GK11300-PA | 1..346 | 1..340 | 1501 | 80.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24179-PA | 340 | GE24179-PA | 1..340 | 1..340 | 1763 | 97.6 | Plus |