Clone LD28120 Report

Search the DGRC for LD28120

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:281
Well:20
Vector:pOT2
Associated Gene/Transcriptout-RA
Protein status:LD28120.pep: gold
Preliminary Size:3547
Sequenced Size:2858

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG8062 2000-02-14 Blastp of sequenced clone
CG8062 2001-01-01 Release 2 assignment
CG8062 2003-01-01 Sim4 clustering to Release 3
CG8062 2008-04-29 Release 5.5 accounting
CG8062 2008-08-15 Release 5.9 accounting
out 2008-12-18 5.12 accounting

Clone Sequence Records

LD28120.complete Sequence

2858 bp (2858 high quality bases) assembled on 2000-02-14

GenBank Submission: AF184230

> LD28120.complete
AGTAAACACACCAACGAGCGGACGTACACGGAGCGAAAGAAGAAGTTGGC
TACCACGAAAGAGTTATTGTTTGTTAGAAACACCAAGCGCAGCAGCAGCA
GCAGCAGTACAAATATTATTGTGTGCCGTCCGAAGAGAACAGCTGAGCCA
CACGCTGTTTTTTAACGCTGTTCCGTTCTGCGGCACTTGCTGTTTGTTAT
CCGTATCCGTCGTGTTTCGTCGTCGTATTTGAACTCTCTTTTTGTTACTG
TGCATATATTTTTGAAATCTCTGTGCTGCACACAGCGCAGGGGGAAAAGT
GCTAGAATTAGCAGATCATCAAGACATCTGGCTAACCTGTGATTTCCAAC
ACACCCGAAGGCAAATTGGCAACAAGTTACCACCGATCAAATCTCGCCAC
AATGGAAAAATCCAGCTTAACGGAGAAGAATCACACCCAAGTGTACAATG
ACACAACGAAGCCAAAGAAGCCCAAGCGTCGCGACAAGAGCGATCTGGGT
CCGGATTTTGTGGCGCCCGACGGGGGATGGGGCTGGGTGGTCTGTCTGGC
AGCCGGTTTGAATAACTTCTTCCTTTTCCCGGCTCTGCAGCAGTATGGCC
TGATCTACAGGGTGCGGATGCAATCGCTGGGCTTCGATGCCAAGCAAACC
ACGACCATTGTGAACGTGGTGATGGCAATCTCCTCGCTAGTGGGCATTGT
CAATGGCGCCATGTTCCGGCGGTTCACATTCCGTCAGGTGGCCCTGACCG
GCACCAGTCTGGCCTTCCTGGGCGTCTTCTTGTCGGCCTTTTGCACCACC
TTCTGGCAGTATATCATCTGTCTGTCGGCGATATTTGGTATCGGTTTGGG
TCTTGCCATGGCCGCCACCTCACTGGCGGTCAATACGTACTTCAAGCTGA
AGAGGCGTCGTGCCACGGGTTTCTCGTGGACGATCACTGGCCTGGGACCC
ATATTCTTTCCGCAGGTGTCTACCGTCCTGTTGGGCTACTATGGTGCCCA
GGGCACCATTCTGATCTATGCTGGAATCGCCATGAATGCCATTCTCTGCG
CTTTGACCCTGCAACCCGTACTTTGGCATGTGAAGAAGCCCGAAAAACCA
GTTCACAATACAATCGAGGGAATTGCCGAGACGGAGAAGCTGCAACCAGA
ACTTTTGGAGGCCAATGGCAATCTGTTGTCGCCCAGCAATGATCCGTGGA
AGGATTACGAGTGCAAGTACTGTCAGTATCAGAAACGTTCTAAGCGAGGC
CTTTTCTCGTCCCAATACCTCTTCAATGTCGATGATCCCGAGAGGCCGGG
GTACGAGATCACCGAGCCAGGAACTCCCATGTTGGCTCGCGCCAATGACG
GTTGGTTCGGGTCGAAGCTCTCCCTGACCTCGGAGAGCGCGGGAGGAGCT
CGCTCTCGCACTCGTCAAGCTCTGATGCGTCAGGTTTCATCCAGAAGTCG
TGAGAATCTCGATAGACTGGAACAGAATCGTCATGACCAGGGTCCAGACA
CTCCATCCGCTGCGGCCTTGTACAAGCCAAACTACTTCAATCGGGAGCGC
GAGGATCTCGATCGCTATGCCAGCAAGACGAGCGTGTATTCTCGGCCTGG
TCAGGATGAGCTGCTGCGCTGCACCTGTGCAGAGGACAAGGCACTGTTGC
AAAAGACAGCCGAATCGCTTCAGGTGAACCTGTTCAATAATTCGGCCGAC
AACACGGAGGCCGAGGAGGAGGCCAAAAGGCGCATGACCTTCTTCCAGAA
GGTGAGCAAGTTCTTTGATTTGGATCTACTGCGGGACTTTACATTTGTCA
ACCTGGCCGTTGGCATGAGCATCATGATGTTTGGCGAGATGAACTTCTCG
GTGCTGACACCATTCATTCTGAACAGCTTTGGGTACACGGATACACAGAT
CTCGCTGGTGATGTCGCTGCTGGCCTGCATGGATATATCGGTGAGATTTC
TCGCTCCGCTCGCCTTGGAGAAGGTGAAGCTGGATAACCGTGTGCTGTTT
GCCTTCGGCATCCTATGCATCGCCGTGGGCCGCGTGGTTGTGGCCTTTAC
CGACTCCTACGAGATCATGATCGGCGTCTTCCTGCTGATCGGCTTTGGCA
AGGCATTCCGCACCATCTTCTCACCGCTGATAATACCCAGTTACGTTCCG
CTCAACCGCTTGCCAGCTGCATCTGGTCTGCAGCTCATCTTCAACACAAT
ATTCTCGTTCGCCATGGGCCCAATTCTTGGTATCTTGACGGAGGCCTACG
GTTATGCAGCCACCATTCATACCATCAATGCACTCACCCTTTTGGCTTTA
CTCCTTTGGTTAGCTGAGTCCGTGGTGCGCCGCATTTTGGGTATACCCTC
CAAAGGATTGGGCCAATAGAAGAGGCATTCATACTAATCCGATTTGAAAT
TGCGACGAGTGTGAGCTGAAAACCTTCGTCGGAACTGAACTACTTGCTAT
ATGTCCATCCCAGTGTGCGAGATCATGGCTAACTTGGAGCTGTAGACATA
ACCTAGTCCATACTTCCCGATTGATGTGTGCGAATAGTATTAATTGAGCG
TAAAGATACCTAAGAAACATATCTCTTAACTAGCTCATAATCACCCATCG
CTACATAAAATTTACGGTCCATTTTTTTTTTTAGCTTTTGATACTCGTAC
TAGAATAATTGAATGTACTTAGTGATACGTTATAAGTGTAATAATATTGT
TCTGCAGTTGATAAAGAAATATATATATGTATATTAGTTAGAAAAAAGTT
AATGCACTATTGGTAAGGTGACTTAATTGAAATACACCATATGGTTTGAA
CATGTGAGTCAGCATATTTATAAAATGGGAAATTGAAAAAAAAAAAAAAA
AAAAAAAA

LD28120.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:42:25
Subject Length Description Subject Range Query Range Score Percent Strand
out.b 3378 out.b 127..2963 1..2837 14185 100 Plus
out.a 3332 out.a 127..2963 1..2837 14185 100 Plus
out-RA 3055 out-RA 203..3039 1..2837 14185 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:36:46
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 19200585..19202123 2231..693 7695 100 Minus
chrX 22417052 chrX 19199918..19200524 2835..2229 2990 99.5 Minus
chrX 22417052 chrX 19210539..19210923 385..1 1925 100 Minus
chrX 22417052 chrX 19202418..19202599 566..385 880 98.9 Minus
chrX 22417052 chrX 19202204..19202331 694..567 640 100 Minus
chrX 22417052 chrX 19192555..19192613 541..483 220 91.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:20:40 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:36:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19311692..19313230 2231..693 7695 100 Minus
X 23542271 X 19311023..19311631 2837..2229 3045 100 Minus
X 23542271 X 19321655..19322039 385..1 1925 100 Minus
X 23542271 X 19313525..19313706 566..385 910 100 Minus
X 23542271 X 19313311..19313438 694..567 640 100 Minus
X 23542271 X 19303662..19303720 541..483 220 91.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:03:22
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 19319790..19321328 2231..693 7695 100 Minus
X 23527363 X 19319121..19319729 2837..2229 3045 100 Minus
X 23527363 X 19329753..19330137 385..1 1925 100 Minus
X 23527363 X 19321623..19321804 566..385 910 100 Minus
X 23527363 X 19321409..19321536 694..567 640 100 Minus
X 23527363 X 19311760..19311818 541..483 220 91.5 Minus
X 23527363 X 19309942..19310062 2185..2065 170 76 Minus
Blast to na_te.dros performed on 2019-03-16 16:36:44 has no hits.

LD28120.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:37:45 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 19202205..19202331 567..693 100 <- Minus
chrX 19202418..19202599 385..566 98 <- Minus
chrX 19210540..19210923 1..384 100   Minus
chrX 19200587..19202122 694..2229 100 <- Minus
chrX 19199918..19200523 2230..2835 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:35:59 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
out-RA 1..1968 402..2369 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:35:31 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
out-RA 1..1968 402..2369 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:19:57 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
out-RA 1..1968 402..2369 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:11:24 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
CG8062-RA 1..1968 402..2369 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:35:36 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
out-RA 1..1968 402..2369 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:35:58 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
out-RA 27..2858 1..2832 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:35:31 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
out-RA 27..2858 1..2832 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:19:57 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
out-RA 27..2858 1..2832 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:11:24 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
CG8062-RA 27..2858 1..2832 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:35:36 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
out-RA 68..2902 1..2835 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:45 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
X 19311025..19311630 2230..2835 100 <- Minus
X 19311694..19313229 694..2229 100 <- Minus
X 19313312..19313438 567..693 100 <- Minus
X 19313525..19313706 385..566 100 <- Minus
X 19321656..19322039 1..384 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:45 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
X 19311025..19311630 2230..2835 100 <- Minus
X 19311694..19313229 694..2229 100 <- Minus
X 19313312..19313438 567..693 100 <- Minus
X 19313525..19313706 385..566 100 <- Minus
X 19321656..19322039 1..384 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:37:45 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
X 19311025..19311630 2230..2835 100 <- Minus
X 19311694..19313229 694..2229 100 <- Minus
X 19313312..19313438 567..693 100 <- Minus
X 19313525..19313706 385..566 100 <- Minus
X 19321656..19322039 1..384 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:19:57 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19205058..19205663 2230..2835 100 <- Minus
arm_X 19205727..19207262 694..2229 100 <- Minus
arm_X 19207345..19207471 567..693 100 <- Minus
arm_X 19207558..19207739 385..566 100 <- Minus
arm_X 19215689..19216072 1..384 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:47:49 Download gff for LD28120.complete
Subject Subject Range Query Range Percent Splice Strand
X 19319123..19319728 2230..2835 100 <- Minus
X 19319792..19321327 694..2229 100 <- Minus
X 19321410..19321536 567..693 100 <- Minus
X 19321623..19321804 385..566 100 <- Minus
X 19329754..19330137 1..384 100   Minus

LD28120.pep Sequence

Translation from 401 to 2368

> LD28120.pep
MEKSSLTEKNHTQVYNDTTKPKKPKRRDKSDLGPDFVAPDGGWGWVVCLA
AGLNNFFLFPALQQYGLIYRVRMQSLGFDAKQTTTIVNVVMAISSLVGIV
NGAMFRRFTFRQVALTGTSLAFLGVFLSAFCTTFWQYIICLSAIFGIGLG
LAMAATSLAVNTYFKLKRRRATGFSWTITGLGPIFFPQVSTVLLGYYGAQ
GTILIYAGIAMNAILCALTLQPVLWHVKKPEKPVHNTIEGIAETEKLQPE
LLEANGNLLSPSNDPWKDYECKYCQYQKRSKRGLFSSQYLFNVDDPERPG
YEITEPGTPMLARANDGWFGSKLSLTSESAGGARSRTRQALMRQVSSRSR
ENLDRLEQNRHDQGPDTPSAAALYKPNYFNREREDLDRYASKTSVYSRPG
QDELLRCTCAEDKALLQKTAESLQVNLFNNSADNTEAEEEAKRRMTFFQK
VSKFFDLDLLRDFTFVNLAVGMSIMMFGEMNFSVLTPFILNSFGYTDTQI
SLVMSLLACMDISVRFLAPLALEKVKLDNRVLFAFGILCIAVGRVVVAFT
DSYEIMIGVFLLIGFGKAFRTIFSPLIIPSYVPLNRLPAASGLQLIFNTI
FSFAMGPILGILTEAYGYAATIHTINALTLLALLLWLAESVVRRILGIPS
KGLGQ*

LD28120.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:55:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15996-PA 655 GF15996-PA 1..655 1..655 2771 81.5 Plus
Dana\GF15997-PA 619 GF15997-PA 5..607 13..642 1431 45 Plus
Dana\GF15995-PA 634 GF15995-PA 85..621 32..643 1127 40.2 Plus
Dana\GF22732-PA 657 GF22732-PA 18..644 9..651 349 24.2 Plus
Dana\GF15947-PA 654 GF15947-PA 6..201 34..229 339 35.7 Plus
Dana\GF15947-PA 654 GF15947-PA 417..616 447..645 261 27 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:55:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18060-PA 653 GG18060-PA 1..653 1..655 3218 95.4 Plus
Dere\GG18069-PA 600 GG18069-PA 4..590 13..644 1422 45.9 Plus
Dere\GG18061-PA 621 GG18061-PA 52..608 5..643 1133 38.3 Plus
Dere\GG18062-PA 647 GG18062-PA 6..201 34..229 339 35.2 Plus
Dere\GG10853-PA 656 GG10853-PA 7..622 1..632 306 22.3 Plus
Dere\GG18062-PA 647 GG18062-PA 416..615 447..645 263 27.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:55:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12572-PA 646 GH12572-PA 1..640 1..649 2522 75.6 Plus
Dgri\GH12573-PA 610 GH12573-PA 7..603 13..644 1484 47.3 Plus
Dgri\GH12571-PA 648 GH12571-PA 75..635 23..643 1160 39.6 Plus
Dgri\GH12136-PA 665 GH12136-PA 6..608 34..643 554 24.9 Plus
Dgri\GH12137-PA 562 GH12137-PA 2..230 18..250 309 30.8 Plus
Dgri\GH12137-PA 562 GH12137-PA 330..532 436..639 156 22 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:30
Subject Length Description Subject Range Query Range Score Percent Strand
out-PB 655 CG8062-PB 1..655 1..655 3370 100 Plus
out-PA 655 CG8062-PA 1..655 1..655 3370 100 Plus
CG14196-PA 600 CG14196-PA 4..590 13..644 1389 45.8 Plus
CG8051-PB 616 CG8051-PB 41..603 3..643 1128 38.5 Plus
CG8051-PA 616 CG8051-PA 41..603 3..643 1128 38.5 Plus
CG8034-PA 647 CG8034-PA 6..201 34..229 342 35.2 Plus
CG11665-PB 658 CG11665-PB 13..629 4..636 333 22.4 Plus
CG11665-PA 658 CG11665-PA 13..629 4..636 333 22.4 Plus
CG8028-PC 563 CG8028-PC 18..243 23..252 312 30.7 Plus
Sln-PA 855 CG8271-PA 220..833 33..636 275 20.3 Plus
CG8034-PA 647 CG8034-PA 404..615 438..645 274 27.8 Plus
CG8034-PB 582 CG8034-PB 339..550 438..645 274 27.8 Plus
Mct1-PB 626 CG3456-PB 29..603 39..633 272 21.4 Plus
Mct1-PA 626 CG3456-PA 29..603 39..633 272 21.4 Plus
CG8389-PA 471 CG8389-PA 2..219 31..261 265 31.6 Plus
CG8389-PB 471 CG8389-PB 2..219 31..261 265 31.6 Plus
CG8034-PB 582 CG8034-PB 5..136 98..229 254 38.6 Plus
CG13907-PB 816 CG13907-PB 72..280 39..250 233 27.7 Plus
CG13907-PA 816 CG13907-PA 72..280 39..250 233 27.7 Plus
CG8028-PD 486 CG8028-PD 4..166 86..252 229 31.5 Plus
chk-PC 894 CG3409-PC 109..323 3..229 229 23.8 Plus
chk-PB 894 CG3409-PB 109..323 3..229 229 23.8 Plus
chk-PA 894 CG3409-PA 109..323 3..229 229 23.8 Plus
CG8389-PA 471 CG8389-PA 248..444 449..643 218 26.9 Plus
CG8389-PB 471 CG8389-PB 248..444 449..643 218 26.9 Plus
CG8028-PC 563 CG8028-PC 335..534 444..642 188 21 Plus
CG8028-PD 486 CG8028-PD 258..457 444..642 188 21 Plus
CG8468-PB 678 CG8468-PB 42..654 37..635 180 21.6 Plus
CG8468-PA 678 CG8468-PA 42..654 37..635 180 21.6 Plus
CG8468-PC 678 CG8468-PC 42..654 37..635 180 21.6 Plus
CG12866-PC 800 CG12866-PC 241..419 37..215 179 25.1 Plus
CG12866-PB 856 CG12866-PB 297..475 37..215 179 25.1 Plus
kar-PA 553 CG12286-PA 74..274 39..232 178 27.4 Plus
kar-PB 612 CG12286-PB 74..274 39..232 178 27.4 Plus
CG10019-PC 1104 CG10019-PC 384..574 39..229 174 24 Plus
CG10019-PB 1104 CG10019-PB 384..574 39..229 174 24 Plus
CG12866-PD 859 CG12866-PD 297..478 37..215 166 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:55:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11136-PA 695 GI11136-PA 53..689 1..649 2345 70.3 Plus
Dmoj\GI11137-PA 610 GI11137-PA 3..603 9..644 1494 46.8 Plus
Dmoj\GI11135-PA 625 GI11135-PA 74..610 31..643 1084 39.6 Plus
Dmoj\GI10984-PA 646 GI10984-PA 6..610 34..645 560 27.2 Plus
Dmoj\GI10224-PA 656 GI10224-PA 26..622 12..632 314 24.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13010-PA 715 GL13010-PA 21..363 7..352 1442 81 Plus
Dper\GL13010-PA 715 GL13010-PA 474..715 413..655 1072 86 Plus
Dper\GL13009-PA 535 GL13009-PA 76..481 23..508 805 37.1 Plus
Dper\GL13011-PA 409 GL13011-PA 2..204 8..203 586 53.2 Plus
Dper\GL13011-PA 409 GL13011-PA 205..399 450..644 551 53.3 Plus
Dper\GL21167-PA 653 GL21167-PA 12..619 2..632 329 23.6 Plus
Dper\GL12986-PA 642 GL12986-PA 29..193 65..229 272 33.9 Plus
Dper\GL12986-PA 642 GL12986-PA 402..608 438..643 260 28.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:55:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20797-PA 648 GA20797-PA 1..648 1..655 2841 83.5 Plus
Dpse\GA25845-PA 598 GA25845-PA 2..588 8..644 1431 45.7 Plus
Dpse\GA25837-PA 633 GA25837-PA 65..620 23..643 1204 40.6 Plus
Dpse\GA11129-PA 653 GA11129-PA 20..619 10..632 327 23.6 Plus
Dpse\GA20776-PA 542 GA20776-PA 11..202 38..229 294 32.3 Plus
Dpse\GA20776-PA 542 GA20776-PA 227..515 365..644 165 20.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22746-PA 654 GM22746-PA 1..654 1..655 3217 96 Plus
Dsec\GM22756-PA 600 GM22756-PA 4..590 13..644 1433 46.2 Plus
Dsec\GM22747-PA 537 GM22747-PA 42..493 3..532 864 36.7 Plus
Dsec\GM22748-PA 639 GM22748-PA 6..201 34..229 339 35.2 Plus
Dsec\GM22749-PA 603 GM22749-PA 42..299 7..265 313 28.5 Plus
Dsec\GM22748-PA 639 GM22748-PA 413..612 447..645 259 27.5 Plus
Dsec\GM22749-PA 603 GM22749-PA 288..576 365..644 160 19.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:55:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15584-PA 654 GD15584-PA 1..654 1..655 3378 96.8 Plus
Dsim\GD15591-PA 600 GD15591-PA 4..590 13..644 1454 46.8 Plus
Dsim\GD15585-PA 618 GD15585-PA 43..605 3..643 1137 38 Plus
Dsim\GD24461-PA 380 GD24461-PA 11..237 38..265 307 30.6 Plus
Dsim\GD10355-PA 658 GD10355-PA 13..275 4..265 266 27.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18693-PA 650 GJ18693-PA 1..644 1..649 2592 76.8 Plus
Dvir\GJ18694-PA 605 GJ18694-PA 7..577 13..623 1441 47.9 Plus
Dvir\GJ18692-PA 638 GJ18692-PA 65..623 20..643 1162 40.4 Plus
Dvir\GJ19449-PA 648 GJ19449-PA 6..610 34..645 558 26.7 Plus
Dvir\GJ18014-PA 662 GJ18014-PA 25..628 16..632 307 24.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19798-PA 656 GK19798-PA 1..655 1..654 2588 77.7 Plus
Dwil\GK19799-PA 597 GK19799-PA 2..584 8..644 1432 44.9 Plus
Dwil\GK19797-PA 657 GK19797-PA 70..629 19..643 1115 38.9 Plus
Dwil\GK20065-PA 639 GK20065-PA 6..610 34..645 554 25.9 Plus
Dwil\GK24906-PA 554 GK24906-PA 15..210 38..233 312 34.2 Plus
Dwil\GK24906-PA 554 GK24906-PA 317..521 436..639 162 21 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17394-PA 654 GE17394-PA 1..654 1..655 3182 91.8 Plus
Dyak\GE17404-PA 631 GE17404-PA 42..621 13..644 1379 45.5 Plus
Dyak\GE17395-PA 623 GE17395-PA 51..610 2..643 1098 37.5 Plus
Dyak\GE17397-PA 647 GE17397-PA 6..201 34..229 339 35.2 Plus
Dyak\GE17398-PA 543 GE17398-PA 11..237 38..265 307 31 Plus
Dyak\GE17397-PA 647 GE17397-PA 416..615 447..645 262 27.5 Plus
Dyak\GE17398-PA 543 GE17398-PA 320..516 449..644 163 21.8 Plus

LD28120.hyp Sequence

Translation from 401 to 2368

> LD28120.hyp
MEKSSLTEKNHTQVYNDTTKPKKPKRRDKSDLGPDFVAPDGGWGWVVCLA
AGLNNFFLFPALQQYGLIYRVRMQSLGFDAKQTTTIVNVVMAISSLVGIV
NGAMFRRFTFRQVALTGTSLAFLGVFLSAFCTTFWQYIICLSAIFGIGLG
LAMAATSLAVNTYFKLKRRRATGFSWTITGLGPIFFPQVSTVLLGYYGAQ
GTILIYAGIAMNAILCALTLQPVLWHVKKPEKPVHNTIEGIAETEKLQPE
LLEANGNLLSPSNDPWKDYECKYCQYQKRSKRGLFSSQYLFNVDDPERPG
YEITEPGTPMLARANDGWFGSKLSLTSESAGGARSRTRQALMRQVSSRSR
ENLDRLEQNRHDQGPDTPSAAALYKPNYFNREREDLDRYASKTSVYSRPG
QDELLRCTCAEDKALLQKTAESLQVNLFNNSADNTEAEEEAKRRMTFFQK
VSKFFDLDLLRDFTFVNLAVGMSIMMFGEMNFSVLTPFILNSFGYTDTQI
SLVMSLLACMDISVRFLAPLALEKVKLDNRVLFAFGILCIAVGRVVVAFT
DSYEIMIGVFLLIGFGKAFRTIFSPLIIPSYVPLNRLPAASGLQLIFNTI
FSFAMGPILGILTEAYGYAATIHTINALTLLALLLWLAESVVRRILGIPS
KGLGQ*

LD28120.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 13:49:02
Subject Length Description Subject Range Query Range Score Percent Strand
out-PB 655 CG8062-PB 1..655 1..655 3370 100 Plus
out-PA 655 CG8062-PA 1..655 1..655 3370 100 Plus
CG14196-PA 600 CG14196-PA 4..590 13..644 1389 45.8 Plus
CG8051-PB 616 CG8051-PB 41..603 3..643 1128 38.5 Plus
CG8051-PA 616 CG8051-PA 41..603 3..643 1128 38.5 Plus