Clone LD28216 Report

Search the DGRC for LD28216

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:282
Well:16
Vector:pOT2
Associated Gene/Transcriptgish-RI
Protein status:LD28216.pep: gold
Preliminary Size:3231
Sequenced Size:3223

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6963 2003-01-01 Sim4 clustering to Release 3
CG6963 2003-02-24 Blastp of sequenced clone
gish 2008-04-29 Release 5.5 accounting
gish 2008-08-15 Release 5.9 accounting
gish 2008-12-18 5.12 accounting
gish 2010-12-02 CDS novel splice

Clone Sequence Records

LD28216.complete Sequence

3223 bp (3223 high quality bases) assembled on 2003-02-24

GenBank Submission: BT004871

> LD28216.complete
GCAGGGGAAAAAATCGCACCATTTTTCTCGTGCTCTCTTGCGTGCGTTTT
TTGGTCTTTCGAGGATTGTTTCGTAGAAAATCAGTTAAACACAAGCCCAG
CTTAATTTATAAAAAGTAGTGAACTAAGTTGTTATCCAGAAATCGACGAG
CGCACAGTAGCAAATCGAGTTGCAAATTTCAATATTCGGTCCGAACGTGT
GTAACTGTGTCTGTGCGTGCGTGCGTGCGTGTGAGAGTGTATGGGTGAAA
AATGAGGCGTAATGAAAATGCGTGCAAAACTGTATAAAAGATTGCTTTGA
TTTCCACGATCGTGAGCATTAAAAGTTTAGGCGTGATACTGACCGGTTAA
ATTTCCCTTAATTGAAATTTAACTACATATTTAAACAGCAACATAGTCCC
TTTTGCCTAAAATGTCATCAAAAACTGGGAGGAAAAATATCATAGCAACA
ATCTGAATGAATTCGGAGATTCAGATCTGTTGTCACAAAAATTGTTGGAT
AAAATGTGCGAAAGTGTGTTTGTCAAATTGTTTAGCCAAAATTATTTGTT
TACATAGTTGTTCAGCGTAGCACGAGGCTGTTTTCCTTAATTCTTAACAA
CATAGATACACTCGCCTTGGCTAATTTACACCGGAACCTAAAGCCGATTA
ACAATAGGAAAATAGTCCTACGACAAATAGCCCGCCTTTTGACATATGAA
CACATAACTAAACTACCACACAGCTCACCAAAAACATAAAATAAATTCGG
AAAGTATAGCACCAAAGCTGAAATTTCAAGGAGATGCTGCTCAAATTTCA
TACTTGATGTCAAACAACGACGACCCCATAGCAACAACAACAACAACAGC
AGAAAGAGAAGGAAAAGGAACAACTGGAATAACTGTAAGCTAGCGAACAG
AGGGAGAGAGGCAATCTCTGTACACACACCTGTCGTCCAGCGGGGGAAAG
AGCAAAAGAGAGCGACGGATCTCCCGTGTGTGTTGTTCGCATGCGCGACA
TGCGCGGACGCTAAGTGAGTGTGAGTGAGTGCGCGAATGCGTGTGAGTGT
GGGCGGTGAGGATAATTCGCTCAATTCGCACGCATCCCACAGATCCTGCA
GATCCTCCAGTTTGTTCGTCAAACAGAGTCAGCATTTCGGATCAAACCAG
TTGCCTGTCAGCAACATTAACAGCCTCAACGTTGGAAAAAAAAAAACAAA
AGCAGCAGCGGCAGTCGATAAAAAAATCATTATCAAAATTACGGAAAAGC
GATCAAAATTCAAGCGAGATTAGCTAGGCGAAATGCAGCGACGAGAACGG
CAAGCAAGTGGCGGTGGCCCACAAACGACAACTGCCGGTCCATCCGCTGG
TAATGTGGCAAATGCCACCACAGCCCTAGCCGGTGGTAAAAGCTCAAGCA
ATAACATGTATTCCACCCGCCAATCTGTAAGCACCACGACCGGTGTACTT
ATGGTCGGACCAAATTTTCGTGTCGGTAAAAAAATTGGCTGTGGTAATTT
TGGCGAATTGCGTTTAGGCAAAAACCTTTACAACAATGAACATGTAGCAA
TAAAAATGGAGCCTATGAAGTCAAAGGCTCCGCAACTACACTTAGAGTAT
AGGTTTTATAAACTATTAGGATCACATGCCGATAACGCCCCAGATGGCAT
ACCACGCATTTATCATTTGGGCACTTGCGGTGGCCGTTACAATGCCATGG
TTTTAGAGTTATTGGGATTATCATTAGAAGATCTCTTCAATATTTGCGCC
CGTAAATTTTCACTTAAGACTGTATTGATGATAGCGAAACAACTTCTCCA
CCGGATCGAATATGTTCATAGTCGGCACTTAATATATAGGGATGTGAAAC
CAGAGAACTTTCTCATTGGCAGAACGTCAACAAAACGTGAAAAAATTATA
CATATAATTGATTTCGGTTTGGCCAAAGAATACATTGATTTAGATACAAA
TAGGCATATACCATATCGGGAGCATAAATCCCTAACTGGAACGGCACGTT
ATATGTCAATCAACACGCACATGGGGCGTGAGCAGTCGCGACGCGATGAT
CTGGAGGCATTGGGGCATATGTTTATGTATTTCTTAAGGGGTTCACTGCC
GTGGCAAGGCCTAAAGGCTGATACACTCAAGGAGAGATATCAAAAAATCG
GTGATACGAAACGAGCAACGCCCATCGAGGTGCTTTGTGATGGACATCCG
GAAGAGTTTGCGACATATTTGCGTTATGTACGGCGGTTAGATTTTTTCGA
AACTCCCGACTATGATTTTCTGCGAAGACTGTTTCAAGACTTATTCGATC
GTAAGGGATACACCGACGAGGGCGAGTTCGACTGGACAGGGAAGACAATG
TCAACGCCCGTCGGATCTCTGCAAACTGGCCATGAAGTCATCATTTCACC
AAATAAAGATCGTCATAATGTTACGGCTAAGACAAATGCCAAAGGAGGTG
TTGCTGCGTGGCCTGATGTGCCAAAGCCGGGGGCAACACTGGGCAATCTA
ACGCCGGCCGATCGGCATGGTTCAGTACAGGTTGTGAGTTCGACGAATGG
CGAACTAAATCCGGACGATCCCACGGCCGGACACTCAAACACGCCCATCA
CACAGCAGCCGGAAGTCGAAGTGGTCGATGAAACAAATGGTTCCTTATAT
TCCAGATGTTGTTGTTTCTTTAAACGAAAGAAGAAGAAATCGACGCGCCA
AAAATGACTAGACGGTGTACAATGTAGTCCAGAACGCGAGGCAGTCACCC
TGCTGCGTGCCACTTCACATTCAAACTCACGGGATAGCGTATTGAATAAT
CCGAGTCAGGATTATATCCAGCAGGCAACGTCGCAGCATACGTTGCGTTA
TCCTCCATCCGCGTCGATGTTGACGCCAACACCAACTACAAACACACCGA
CACTTCCGTTGTAATTTATATAAATATAAAGCCAGATGCAAAATGCAGAA
AGCAACAAAAAAAATATTAAACGAAACCCAACAAAACAAAAACAAAACAA
ATGAACCCCGTACACATTAAATACACTAAAAAACAGTAAAAACAAACAAA
ATGAAACCAATTTTGATTAATTATTGTAATGATTGTATTTTATTATTATT
TTTATTATTTACCAATTTTGCGTTTATTATATAAATTATTATAATTATTA
ATTATATTATTAATTAATGCTATTATAAATAAAAAAGAAAAGAAAATTCA
AACGTAAAAAAAAAAAAAAAAAA

LD28216.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:18:30
Subject Length Description Subject Range Query Range Score Percent Strand
gish.bm 4939 gish.bm 113..3319 1..3207 16035 100 Plus
gish.az 3646 gish.az 113..3319 1..3207 16035 100 Plus
gish.bd 3856 gish.bd 113..3319 1..3207 16035 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 12098806..12099825 289..1308 5055 99.7 Plus
chr3R 27901430 chr3R 12126478..12127034 2638..3205 2610 97.7 Plus
chr3R 27901430 chr3R 12097687..12097976 1..290 1435 99.7 Plus
chr3R 27901430 chr3R 12121508..12121780 1910..2182 1365 100 Plus
chr3R 27901430 chr3R 12114285..12114496 1307..1518 1060 100 Plus
chr3R 27901430 chr3R 12121846..12122018 2178..2350 865 100 Plus
chr3R 27901430 chr3R 12118660..12118827 1628..1795 840 100 Plus
chr3R 27901430 chr3R 12121335..12121449 1796..1910 575 100 Plus
chr3R 27901430 chr3R 12117395..12117507 1516..1628 565 100 Plus
chr3R 27901430 chr3R 12125915..12126024 2528..2637 550 100 Plus
chr3R 27901430 chr3R 12124262..12124364 2430..2532 515 100 Plus
chr3R 27901430 chr3R 12123142..12123223 2350..2431 410 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:20:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16274150..16275169 289..1308 5100 100 Plus
3R 32079331 3R 16301805..16302374 2638..3207 2850 100 Plus
3R 32079331 3R 16273041..16273330 1..290 1450 100 Plus
3R 32079331 3R 16296835..16297107 1910..2182 1365 100 Plus
3R 32079331 3R 16289629..16289840 1307..1518 1060 100 Plus
3R 32079331 3R 16297173..16297345 2178..2350 865 100 Plus
3R 32079331 3R 16293986..16294153 1628..1795 840 100 Plus
3R 32079331 3R 16296662..16296776 1796..1910 575 100 Plus
3R 32079331 3R 16292722..16292834 1516..1628 565 100 Plus
3R 32079331 3R 16301242..16301351 2528..2637 550 100 Plus
3R 32079331 3R 16299589..16299691 2430..2532 515 100 Plus
3R 32079331 3R 16298469..16298550 2350..2431 410 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:57:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 16014981..16016000 289..1308 5100 100 Plus
3R 31820162 3R 16042636..16043205 2638..3207 2850 100 Plus
3R 31820162 3R 16013872..16014161 1..290 1450 100 Plus
3R 31820162 3R 16037666..16037938 1910..2182 1365 100 Plus
3R 31820162 3R 16030460..16030671 1307..1518 1060 100 Plus
3R 31820162 3R 16038004..16038176 2178..2350 865 100 Plus
3R 31820162 3R 16034817..16034984 1628..1795 840 100 Plus
3R 31820162 3R 16037493..16037607 1796..1910 575 100 Plus
3R 31820162 3R 16033553..16033665 1516..1628 565 100 Plus
3R 31820162 3R 16042073..16042182 2528..2637 550 100 Plus
3R 31820162 3R 16040420..16040522 2430..2532 515 100 Plus
3R 31820162 3R 16039300..16039381 2350..2431 410 100 Plus
Blast to na_te.dros performed 2019-03-16 04:09:07
Subject Length Description Subject Range Query Range Score Percent Strand
Quasimodo 7387 Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. 6517..6670 2886..3039 176 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2725 1160..1295 162 64.3 Plus

LD28216.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 04:10:13 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 12123143..12123223 2351..2431 100 -> Plus
chr3R 12124264..12124362 2432..2530 100 -> Plus
chr3R 12125918..12126024 2531..2637 100 -> Plus
chr3R 12097687..12097881 1..195 99 == Plus
chr3R 12097934..12097976 248..290 100 -> Plus
chr3R 12098808..12099825 291..1308 99 -> Plus
chr3R 12114287..12114495 1309..1517 100 -> Plus
chr3R 12117397..12117507 1518..1628 100 -> Plus
chr3R 12118661..12118827 1629..1795 100 -> Plus
chr3R 12121335..12121449 1796..1910 100 -> Plus
chr3R 12121509..12121777 1911..2179 100 -> Plus
chr3R 12121848..12122018 2180..2350 100 -> Plus
chr3R 12126478..12126793 2638..2953 99 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:21:05 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RH 1..1363 1283..2646 99 == Plus
gish-RH 1364..1407 2664..2707 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:48:29 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RI 1..1425 1283..2707 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:18:31 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RL 1364..1614 2664..2914 100   Plus
gish-RL 1..1363 1283..2646 99 == Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:39:53 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RH 1..1363 1283..2646 99 == Plus
gish-RH 1364..1407 2664..2707 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:28:43 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RL 1..1363 1283..2646 99 == Plus
gish-RL 1364..1614 2664..2914 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:21:05 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RB 35..2671 1..2637 100 == Plus
gish-RB 2672..3221 2656..3205 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:48:29 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RI 1..3205 1..3205 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:18:31 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RI 41..3245 1..3205 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:39:54 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RB 35..2671 1..2637 100 == Plus
gish-RB 2672..3221 2656..3205 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:28:43 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
gish-RI 41..3245 1..3205 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:10:13 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16273041..16273330 1..290 100 -> Plus
3R 16274152..16275169 291..1308 100 -> Plus
3R 16289631..16289839 1309..1517 100 -> Plus
3R 16292724..16292834 1518..1628 100 -> Plus
3R 16293987..16294153 1629..1795 100 -> Plus
3R 16296662..16296776 1796..1910 100 -> Plus
3R 16296836..16297104 1911..2179 100 -> Plus
3R 16297175..16297345 2180..2350 100 -> Plus
3R 16298470..16298550 2351..2431 100 -> Plus
3R 16299591..16299689 2432..2530 100 -> Plus
3R 16301245..16301351 2531..2637 100 -> Plus
3R 16301805..16302372 2638..3205 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:10:13 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16273041..16273330 1..290 100 -> Plus
3R 16274152..16275169 291..1308 100 -> Plus
3R 16289631..16289839 1309..1517 100 -> Plus
3R 16292724..16292834 1518..1628 100 -> Plus
3R 16293987..16294153 1629..1795 100 -> Plus
3R 16296662..16296776 1796..1910 100 -> Plus
3R 16296836..16297104 1911..2179 100 -> Plus
3R 16297175..16297345 2180..2350 100 -> Plus
3R 16298470..16298550 2351..2431 100 -> Plus
3R 16299591..16299689 2432..2530 100 -> Plus
3R 16301245..16301351 2531..2637 100 -> Plus
3R 16301805..16302372 2638..3205 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 04:10:13 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16273041..16273330 1..290 100 -> Plus
3R 16274152..16275169 291..1308 100 -> Plus
3R 16289631..16289839 1309..1517 100 -> Plus
3R 16292724..16292834 1518..1628 100 -> Plus
3R 16293987..16294153 1629..1795 100 -> Plus
3R 16296662..16296776 1796..1910 100 -> Plus
3R 16296836..16297104 1911..2179 100 -> Plus
3R 16297175..16297345 2180..2350 100 -> Plus
3R 16298470..16298550 2351..2431 100 -> Plus
3R 16299591..16299689 2432..2530 100 -> Plus
3R 16301245..16301351 2531..2637 100 -> Plus
3R 16301805..16302372 2638..3205 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:18:31 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12098763..12099052 1..290 100 -> Plus
arm_3R 12099874..12100891 291..1308 100 -> Plus
arm_3R 12115353..12115561 1309..1517 100 -> Plus
arm_3R 12118446..12118556 1518..1628 100 -> Plus
arm_3R 12119709..12119875 1629..1795 100 -> Plus
arm_3R 12122384..12122498 1796..1910 100 -> Plus
arm_3R 12122558..12122826 1911..2179 100 -> Plus
arm_3R 12122897..12123067 2180..2350 100 -> Plus
arm_3R 12124192..12124272 2351..2431 100 -> Plus
arm_3R 12125313..12125411 2432..2530 100 -> Plus
arm_3R 12126967..12127073 2531..2637 100 -> Plus
arm_3R 12127527..12128094 2638..3205 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:10:14 Download gff for LD28216.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16013872..16014161 1..290 100 -> Plus
3R 16014983..16016000 291..1308 100 -> Plus
3R 16030462..16030670 1309..1517 100 -> Plus
3R 16033555..16033665 1518..1628 100 -> Plus
3R 16034818..16034984 1629..1795 100 -> Plus
3R 16037493..16037607 1796..1910 100 -> Plus
3R 16037667..16037935 1911..2179 100 -> Plus
3R 16038006..16038176 2180..2350 100 -> Plus
3R 16039301..16039381 2351..2431 100 -> Plus
3R 16040422..16040520 2432..2530 100 -> Plus
3R 16042076..16042182 2531..2637 100 -> Plus
3R 16042636..16043203 2638..3205 100   Plus

LD28216.pep Sequence

Translation from 1282 to 2706

> LD28216.pep
MQRRERQASGGGPQTTTAGPSAGNVANATTALAGGKSSSNNMYSTRQSVS
TTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAP
QLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLED
LFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTST
KREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGRE
QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV
LCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFD
WTGKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVAAWPDVPKPG
ATLGNLTPADRHGSVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDE
TNGSLYSRCCCFFKRKKKKSTRQK*

LD28216.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:28:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18486-PA 474 GF18486-PA 13..474 6..474 2439 96.8 Plus
Dana\GF23293-PA 441 GF23293-PA 3..291 56..352 846 53.9 Plus
Dana\GF21383-PA 337 GF21383-PA 14..312 56..362 765 49.8 Plus
Dana\GF13879-PA 415 GF13879-PA 15..307 57..357 724 47.2 Plus
Dana\GF19391-PA 344 GF19391-PA 16..284 61..337 716 50.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:28:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16991-PA 468 GG16991-PA 1..468 1..474 2512 98.3 Plus
Dere\GG11892-PA 440 GG11892-PA 3..291 56..352 845 53.9 Plus
Dere\GG17734-PA 337 GG17734-PA 14..312 56..362 765 49.8 Plus
Dere\GG17715-PA 344 GG17715-PA 16..303 61..356 728 48 Plus
Dere\GG21733-PA 394 GG21733-PA 22..330 57..383 699 45.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:28:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19542-PA 459 GH19542-PA 1..459 1..474 2319 91.4 Plus
Dgri\GH14346-PA 439 GH14346-PA 3..291 56..352 849 53.9 Plus
Dgri\GH12114-PA 343 GH12114-PA 14..315 56..365 785 50.3 Plus
Dgri\GH12595-PA 343 GH12595-PA 5..338 47..387 770 46.2 Plus
Dgri\GH10150-PA 370 GH10150-PA 22..318 57..361 705 46.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:19:05
Subject Length Description Subject Range Query Range Score Percent Strand
gish-PI 474 CG6963-PI 1..474 1..474 2516 100 Plus
gish-PK 496 CG6963-PK 1..496 1..474 2483 95.6 Plus
gish-PM 468 CG6963-PM 1..468 1..474 2465 98.5 Plus
gish-PL 537 CG6963-PL 1..468 1..474 2465 98.5 Plus
gish-PH 468 CG6963-PH 1..468 1..474 2465 98.5 Plus
gish-PD 468 CG6963-PD 1..468 1..474 2465 98.5 Plus
gish-PB 468 CG6963-PB 1..468 1..474 2465 98.5 Plus
gish-PJ 521 CG6963-PJ 1..521 1..474 2447 91 Plus
gish-PG 476 CG6963-PG 14..476 6..474 2426 97.7 Plus
gish-PE 463 CG6963-PE 1..463 1..474 2337 93.7 Plus
gish-PC 427 CG6963-PC 1..427 42..474 2259 98.4 Plus
gish-PA 422 CG6963-PA 1..422 42..474 2131 93.1 Plus
gish-PF 358 CG6963-PF 1..358 1..358 1889 99.7 Plus
dco-PE 440 CG2048-PE 3..404 56..444 849 45.5 Plus
dco-PD 440 CG2048-PD 3..404 56..444 849 45.5 Plus
dco-PC 440 CG2048-PC 3..404 56..444 849 45.5 Plus
dco-PB 440 CG2048-PB 3..404 56..444 849 45.5 Plus
dco-PA 440 CG2048-PA 3..404 56..444 849 45.5 Plus
CkIalpha-PG 337 CG2028-PG 14..311 56..361 760 50 Plus
CkIalpha-PF 337 CG2028-PF 14..311 56..361 760 50 Plus
CkIalpha-PD 337 CG2028-PD 14..311 56..361 760 50 Plus
CkIalpha-PE 337 CG2028-PE 14..311 56..361 760 50 Plus
CkIalpha-PA 337 CG2028-PA 14..311 56..361 760 50 Plus
CkIalpha-PB 337 CG2028-PB 14..311 56..361 760 50 Plus
CG2577-PA 344 CG2577-PA 16..298 61..351 721 47.8 Plus
CG7094-PA 390 CG7094-PA 21..309 56..352 688 47.1 Plus
CG12147-PA 477 CG12147-PA 62..399 56..389 679 43.2 Plus
CG9962-PA 319 CG9962-PA 19..296 66..351 597 42.7 Plus
Asator-PG 1144 CG11533-PG 152..516 46..417 406 31.2 Plus
Asator-PJ 1261 CG11533-PJ 151..490 46..388 403 32.2 Plus
Asator-PE 1262 CG11533-PE 152..491 46..388 403 32.2 Plus
Asator-PI 1348 CG11533-PI 151..490 46..388 403 32.2 Plus
Asator-PD 1349 CG11533-PD 152..491 46..388 403 32.2 Plus
Asator-PF 811 CG11533-PF 12..335 57..388 402 32.6 Plus
Asator-PK 1106 CG11533-PK 12..335 57..388 402 32.6 Plus
Asator-PL 1106 CG11533-PL 12..335 57..388 402 32.6 Plus
Asator-PH 1193 CG11533-PH 12..335 57..388 402 32.6 Plus
ball-PB 599 CG6386-PB 16..357 32..363 230 24.9 Plus
ball-PA 599 CG6386-PA 16..357 32..363 230 24.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22941-PA 461 GI22941-PA 1..461 1..474 2343 92.2 Plus
Dmoj\GI16325-PA 343 GI16325-PA 14..337 56..387 779 46.7 Plus
Dmoj\GI16225-PA 343 GI16225-PA 14..338 56..387 758 47.2 Plus
Dmoj\GI22355-PA 379 GI22355-PA 22..309 57..352 711 49 Plus
Dmoj\GI22988-PA 328 GI22988-PA 17..296 61..351 686 47.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:28:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21596-PA 468 GL21596-PA 1..468 1..474 2472 96.6 Plus
Dper\GL13140-PA 288 GL13140-PA 14..287 56..337 742 52.1 Plus
Dper\GL15889-PA 374 GL15889-PA 29..316 57..352 714 47.3 Plus
Dper\GL25396-PA 345 GL25396-PA 2..302 47..356 709 46.1 Plus
Dper\GL13966-PA 404 GL13966-PA 3..370 56..444 658 41.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:28:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19988-PB 468 GA19988-PB 1..468 1..474 2472 96.6 Plus
Dpse\GA19988-PC 422 GA19988-PC 1..422 42..474 2164 92.8 Plus
Dpse\GA19988-PD 355 GA19988-PD 3..355 6..358 1842 96.3 Plus
Dpse\GA15205-PD 439 GA15205-PD 3..405 56..444 854 45.3 Plus
Dpse\GA15205-PB 439 GA15205-PB 3..405 56..444 854 45.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15143-PA 476 GM15143-PA 14..476 6..474 2472 97.7 Plus
Dsec\GM12110-PA 440 GM12110-PA 3..291 56..352 845 53.9 Plus
Dsec\GM11579-PA 337 GM11579-PA 14..312 56..362 766 49.8 Plus
Dsec\GM11559-PA 344 GM11559-PA 16..303 61..356 725 48 Plus
Dsec\GM17114-PA 379 GM17114-PA 21..309 56..352 702 47.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:28:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19086-PA 476 GD19086-PA 14..476 6..474 2472 97.7 Plus
Dsim\GD16644-PA 395 GD16644-PA 3..291 56..352 844 53.9 Plus
Dsim\GD17076-PA 344 GD17076-PA 16..303 61..356 725 48 Plus
Dsim\GD22814-PA 319 GD22814-PA 17..296 64..351 612 43.4 Plus
Dsim\GD24797-PA 157 GD24797-PA 14..152 56..200 331 45.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:28:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23721-PA 461 GJ23721-PA 1..461 1..474 2345 92.4 Plus
Dvir\GJ10658-PA 443 GJ10658-PA 3..290 56..351 843 53.7 Plus
Dvir\GJ15665-PA 343 GJ15665-PA 14..302 56..352 785 51.5 Plus
Dvir\GJ15916-PA 343 GJ15916-PA 14..338 56..387 765 47.2 Plus
Dvir\GJ21295-PA 379 GJ21295-PA 22..309 57..352 706 48.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13771-PA 468 GK13771-PA 1..468 1..474 2467 97.1 Plus
Dwil\GK22559-PA 425 GK22559-PA 3..290 56..351 849 54.1 Plus
Dwil\GK25517-PA 337 GK25517-PA 14..312 56..362 765 49.8 Plus
Dwil\GK24490-PA 325 GK24490-PA 12..315 56..367 755 48.6 Plus
Dwil\GK18163-PA 397 GK18163-PA 4..309 38..352 728 47.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:28:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24384-PA 494 GE24384-PA 1..494 1..474 2482 93.2 Plus
Dyak\GE23340-PA 440 GE23340-PA 3..291 56..352 845 53.9 Plus
Dyak\GE17024-PA 337 GE17024-PA 14..312 56..362 766 49.8 Plus
Dyak\GE13122-PA 390 GE13122-PA 22..315 57..358 692 46.4 Plus
Dyak\GE25283-PA 480 GE25283-PA 52..354 42..351 680 43.9 Plus

LD28216.hyp Sequence

Translation from 1282 to 2706

> LD28216.hyp
MQRRERQASGGGPQTTTAGPSAGNVANATTALAGGKSSSNNMYSTRQSVS
TTTGVLMVGPNFRVGKKIGCGNFGELRLGKNLYNNEHVAIKMEPMKSKAP
QLHLEYRFYKLLGSHADNAPDGIPRIYHLGTCGGRYNAMVLELLGLSLED
LFNICARKFSLKTVLMIAKQLLHRIEYVHSRHLIYRDVKPENFLIGRTST
KREKIIHIIDFGLAKEYIDLDTNRHIPYREHKSLTGTARYMSINTHMGRE
QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEV
LCDGHPEEFATYLRYVRRLDFFETPDYDFLRRLFQDLFDRKGYTDEGEFD
WTGKTMSTPVGSLQTGHEVIISPNKDRHNVTAKTNAKGGVAAWPDVPKPG
ATLGNLTPADRHGSVQVVSSTNGELNPDDPTAGHSNTPITQQPEVEVVDE
TNGSLYSRCCCFFKRKKKKSTRQK*

LD28216.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:10:32
Subject Length Description Subject Range Query Range Score Percent Strand
gish-PI 474 CG6963-PI 1..474 1..474 2516 100 Plus
gish-PK 496 CG6963-PK 1..496 1..474 2483 95.6 Plus
gish-PM 468 CG6963-PM 1..468 1..474 2465 98.5 Plus
gish-PL 537 CG6963-PL 1..468 1..474 2465 98.5 Plus
gish-PH 468 CG6963-PH 1..468 1..474 2465 98.5 Plus