BDGP Sequence Production Resources |
Search the DGRC for LD28275
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 282 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7275-RA |
Protein status: | LD28275.pep: gold |
Preliminary Size: | 1531 |
Sequenced Size: | 1454 |
Gene | Date | Evidence |
---|---|---|
CG7275 | 2001-09-19 | Blastp of sequenced clone |
CG7275 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7275 | 2008-04-29 | Release 5.5 accounting |
CG7275 | 2008-08-15 | Release 5.9 accounting |
CG7275 | 2008-12-18 | 5.12 accounting |
1454 bp (1454 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058590
> LD28275.complete TTTTATTTTACGCCGCAGAAAAGCTTAATAAATGCAATCAGGATGAAGGT GAAAATGATTAGTCGCAATCCGGATAACTATGTCCGAGAAACCAAACTGC AACAGCACAAAATGCCCAGGAACTACGATCCTTCGCTGCATCCTTTGGAG GGTCCCAGGGAATACGTGCGTGCCCTGAATGCCACCAAGTTGGATCGAGT ATTTGCCAAACCCTTCGTCTGCAATTTGAGCGGGCATCGCGATGGAGTCT CCTGCTTCGGAAAGCATCCCAAGCAACTTTCCACCTTGGCCACCGGCGCC TATGACGGCGAAGTGCGCATTTGGGACTTGGCGAATCGTATCAGCTCTCG GAACTTTGTGGCCCACGACGGTTTCGTTCGCGGCATTGCTTACACCCAGA ACGGAGGTCGCATTTTCACCGTGGGAGATGATAAAACCATCAAGGTTTGG AAAGCAGAGGCTCCGGAAGTCGGCGAGGATGAGGTGCCGGTGAACACTAT ACTGAGTAAATTTGGACTGCACGGCATCTCGCACAATCGCAGGGATAACA AGTTCGCCACCTGTGGCGAGGTATGCGCCATTTGGGACGAAAGGCACAAC GATCCTTTGAAGACATTGAAGTGGGGCGTCGATACCCTTCACACCATATC CTATAACCCCGTGGAAACAAGCATCCTGGCGTGCTGTGCCAGCGATCGCA GCATTATCCTGTACGATCAGAGAGAGGCGCAGCCACTAAGGAAGGTCGTC CTAACCATGAAGAGCAACAAGCTCGCGTGGAATCCCATGGAGGCGTTCAA CTTCACAGTGGCCAACGAGGATTGCAACCTTTATACCTTTGACACTCGCA AGCTGCAAACGCCGCTGAAGGTTCACTTTGACCATGTTTCCGCTGTCACC GATGTTGACTACTCGCCCACTGGCAAGGAATTCGTCTCGGCCAGCTACGA CAAGACCATTCGGATCTACAATGCCCACCACAGTCACTCGCGGGATATTT ACCACACAAAACGCATGCAGCATGTGGTCTGCGTGGCCTGGTCCCTCGAT AATCGATACGTTTTCTCCGGCTCCGACGAAATGAACGTCCGCATGTGGAA GGCGAATGCCTCCGAAAAGCTGGGCGTCATCCGTCCACGTGAGCGCGTCA ATTTCAATTACCAGGAGGCGCTGAAGCAAAAGTATGCCGCTCATCCGCAG ATCAAGCGCATCGCGCGCCATCGCCAGGTGCCGCGTCACGTGCTCAATGC ACAGAAGAAGATGCGCACGGTCAAGGAGAAGGAGCAGGTCAAGGAGGCCA ATGTGCGCAAGCACACCAAGAAGAGCAAGAAGGTGCCCTACGTCAGCGAG AAAAAGAAGCATGTGCTGAAGGAGGAGGTGTGAGGATGATTGCTAACGAC TGTAGTTGGATAAGTTTGAATAAAATTGATTTTTGTAAAAAAAAAAAAAA AAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 15489135..15489849 | 113..827 | 3575 | 100 | Plus |
chr3L | 24539361 | chr3L | 15489906..15490514 | 828..1436 | 3030 | 99.8 | Plus |
chr3L | 24539361 | chr3L | 15488971..15489082 | 1..112 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 15499182..15499896 | 113..827 | 3575 | 100 | Plus |
3L | 28110227 | 3L | 15499953..15500563 | 828..1438 | 3055 | 100 | Plus |
3L | 28110227 | 3L | 15499018..15499129 | 1..112 | 560 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 15492282..15492996 | 113..827 | 3575 | 100 | Plus |
3L | 28103327 | 3L | 15493053..15493663 | 828..1438 | 3055 | 100 | Plus |
3L | 28103327 | 3L | 15492118..15492229 | 1..112 | 560 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 15488971..15489082 | 1..112 | 100 | -> | Plus |
chr3L | 15489135..15489849 | 113..827 | 100 | -> | Plus |
chr3L | 15489906..15490514 | 828..1436 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 1..1341 | 43..1383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 1..1341 | 43..1383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 1..1341 | 43..1383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 1..1341 | 43..1383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 1..1341 | 43..1383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 55..1490 | 1..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 55..1490 | 1..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 60..1495 | 1..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 55..1490 | 1..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7275-RA | 60..1495 | 1..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15499018..15499129 | 1..112 | 100 | -> | Plus |
3L | 15499182..15499896 | 113..827 | 100 | -> | Plus |
3L | 15499953..15500561 | 828..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15499018..15499129 | 1..112 | 100 | -> | Plus |
3L | 15499182..15499896 | 113..827 | 100 | -> | Plus |
3L | 15499953..15500561 | 828..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15499018..15499129 | 1..112 | 100 | -> | Plus |
3L | 15499182..15499896 | 113..827 | 100 | -> | Plus |
3L | 15499953..15500561 | 828..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 15492118..15492229 | 1..112 | 100 | -> | Plus |
arm_3L | 15492282..15492996 | 113..827 | 100 | -> | Plus |
arm_3L | 15493053..15493661 | 828..1436 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 15492282..15492996 | 113..827 | 100 | -> | Plus |
3L | 15493053..15493661 | 828..1436 | 100 | Plus | |
3L | 15492118..15492229 | 1..112 | 100 | -> | Plus |
Translation from 0 to 1382
> LD28275.hyp FYFTPQKSLINAIRMKVKMISRNPDNYVRETKLQQHKMPRNYDPSLHPLE GPREYVRALNATKLDRVFAKPFVCNLSGHRDGVSCFGKHPKQLSTLATGA YDGEVRIWDLANRISSRNFVAHDGFVRGIAYTQNGGRIFTVGDDKTIKVW KAEAPEVGEDEVPVNTILSKFGLHGISHNRRDNKFATCGEVCAIWDERHN DPLKTLKWGVDTLHTISYNPVETSILACCASDRSIILYDQREAQPLRKVV LTMKSNKLAWNPMEAFNFTVANEDCNLYTFDTRKLQTPLKVHFDHVSAVT DVDYSPTGKEFVSASYDKTIRIYNAHHSHSRDIYHTKRMQHVVCVAWSLD NRYVFSGSDEMNVRMWKANASEKLGVIRPRERVNFNYQEALKQKYAAHPQ IKRIARHRQVPRHVLNAQKKMRTVKEKEQVKEANVRKHTKKSKKVPYVSE KKKHVLKEEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7275-PA | 446 | CG7275-PA | 1..446 | 15..460 | 2379 | 100 | Plus |
Poc1-PA | 391 | CG10191-PA | 13..300 | 75..369 | 203 | 24.4 | Plus |
Poc1-PB | 403 | CG10191-PB | 13..300 | 75..369 | 203 | 24.4 | Plus |
CG3436-PC | 347 | CG3436-PC | 91..340 | 73..320 | 167 | 26.3 | Plus |
CG3436-PA | 347 | CG3436-PA | 91..340 | 73..320 | 167 | 26.3 | Plus |
Translation from 42 to 1382
> LD28275.pep MKVKMISRNPDNYVRETKLQQHKMPRNYDPSLHPLEGPREYVRALNATKL DRVFAKPFVCNLSGHRDGVSCFGKHPKQLSTLATGAYDGEVRIWDLANRI SSRNFVAHDGFVRGIAYTQNGGRIFTVGDDKTIKVWKAEAPEVGEDEVPV NTILSKFGLHGISHNRRDNKFATCGEVCAIWDERHNDPLKTLKWGVDTLH TISYNPVETSILACCASDRSIILYDQREAQPLRKVVLTMKSNKLAWNPME AFNFTVANEDCNLYTFDTRKLQTPLKVHFDHVSAVTDVDYSPTGKEFVSA SYDKTIRIYNAHHSHSRDIYHTKRMQHVVCVAWSLDNRYVFSGSDEMNVR MWKANASEKLGVIRPRERVNFNYQEALKQKYAAHPQIKRIARHRQVPRHV LNAQKKMRTVKEKEQVKEANVRKHTKKSKKVPYVSEKKKHVLKEEV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23700-PA | 445 | GF23700-PA | 1..445 | 1..446 | 2247 | 91.5 | Plus |
Dana\GF10412-PA | 403 | GF10412-PA | 14..300 | 62..355 | 190 | 23.3 | Plus |
Dana\GF20651-PA | 698 | GF20651-PA | 421..655 | 80..312 | 175 | 25.1 | Plus |
Dana\GF20700-PA | 347 | GF20700-PA | 91..342 | 59..308 | 173 | 25.4 | Plus |
Dana\GF12945-PA | 1695 | GF12945-PA | 1232..1482 | 50..309 | 153 | 25 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15899-PA | 446 | GG15899-PA | 1..446 | 1..446 | 2392 | 98.4 | Plus |
Dere\GG13777-PA | 390 | GG13777-PA | 1..300 | 50..355 | 199 | 24 | Plus |
Dere\GG24701-PA | 347 | GG24701-PA | 91..342 | 59..308 | 173 | 27.5 | Plus |
Dere\GG24716-PA | 700 | GG24716-PA | 423..692 | 80..349 | 170 | 23.9 | Plus |
Dere\GG20967-PA | 1701 | GG20967-PA | 1238..1488 | 50..309 | 163 | 25.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14540-PA | 445 | GH14540-PA | 1..445 | 1..446 | 2152 | 88.1 | Plus |
Dgri\GH13949-PA | 346 | GH13949-PA | 1..173 | 1..173 | 798 | 86.1 | Plus |
Dgri\GH13949-PA | 346 | GH13949-PA | 183..346 | 282..446 | 770 | 86.1 | Plus |
Dgri\GH11222-PA | 766 | GH11222-PA | 489..726 | 80..315 | 179 | 24.8 | Plus |
Dgri\GH14795-PA | 404 | GH14795-PA | 34..301 | 82..355 | 165 | 23 | Plus |
Dgri\GH11537-PA | 347 | GH11537-PA | 91..342 | 59..308 | 164 | 26 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7275-PA | 446 | CG7275-PA | 1..446 | 1..446 | 2379 | 100 | Plus |
Poc1-PA | 391 | CG10191-PA | 13..300 | 61..355 | 203 | 24.4 | Plus |
Poc1-PB | 403 | CG10191-PB | 13..300 | 61..355 | 203 | 24.4 | Plus |
ebi-PA | 700 | CG4063-PA | 423..655 | 80..310 | 169 | 24.9 | Plus |
CG3436-PC | 347 | CG3436-PC | 91..340 | 59..306 | 167 | 26.3 | Plus |
CG3436-PA | 347 | CG3436-PA | 91..340 | 59..306 | 167 | 26.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13111-PA | 445 | GI13111-PA | 1..445 | 1..446 | 2201 | 88.8 | Plus |
Dmoj\GI17028-PA | 347 | GI17028-PA | 91..342 | 59..308 | 169 | 24.2 | Plus |
Dmoj\GI21646-PA | 723 | GI21646-PA | 446..680 | 80..312 | 167 | 24.3 | Plus |
Dmoj\GI11850-PA | 402 | GI11850-PA | 11..297 | 62..355 | 162 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24801-PA | 445 | GL24801-PA | 1..445 | 1..446 | 2191 | 91.3 | Plus |
Dper\GL21559-PA | 413 | GL21559-PA | 14..300 | 62..355 | 192 | 23.5 | Plus |
Dper\GL25365-PA | 413 | GL25365-PA | 31..300 | 80..355 | 190 | 24 | Plus |
Dper\GL15696-PA | 413 | GL15696-PA | 14..300 | 62..355 | 185 | 23.8 | Plus |
Dper\GL25364-PA | 413 | GL25364-PA | 31..300 | 80..355 | 184 | 23.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20229-PA | 445 | GA20229-PA | 1..445 | 1..446 | 2190 | 91.3 | Plus |
Dpse\GA10144-PA | 413 | GA10144-PA | 14..300 | 62..355 | 184 | 23.8 | Plus |
Dpse\GA26333-PB | 299 | GA26333-PB | 14..299 | 62..354 | 174 | 23.4 | Plus |
Dpse\GA17451-PA | 347 | GA17451-PA | 91..342 | 59..308 | 171 | 25.8 | Plus |
Dpse\GA17928-PA | 694 | GA17928-PA | 417..651 | 80..312 | 167 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25528-PA | 446 | GM25528-PA | 1..446 | 1..446 | 2389 | 98.4 | Plus |
Dsec\GM24599-PA | 389 | GM24599-PA | 14..300 | 62..355 | 202 | 24.7 | Plus |
Dsec\GM16739-PA | 700 | GM16739-PA | 423..692 | 80..349 | 176 | 24 | Plus |
Dsec\GM16719-PA | 347 | GM16719-PA | 91..342 | 59..308 | 169 | 27.2 | Plus |
Dsec\GM19903-PA | 1701 | GM19903-PA | 1238..1488 | 50..309 | 158 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14543-PA | 521 | GD14543-PA | 150..521 | 75..446 | 1986 | 98.4 | Plus |
Dsim\GD12669-PA | 389 | GD12669-PA | 14..300 | 62..355 | 205 | 25.3 | Plus |
Dsim\GD23022-PA | 700 | GD23022-PA | 423..692 | 80..349 | 176 | 24 | Plus |
Dsim\GD23005-PA | 347 | GD23005-PA | 91..342 | 59..308 | 169 | 27.2 | Plus |
Dsim\GD25388-PA | 1932 | GD25388-PA | 1238..1488 | 50..309 | 159 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13858-PA | 445 | GJ13858-PA | 1..445 | 1..446 | 2204 | 89.2 | Plus |
Dvir\GJ13548-PA | 405 | GJ13548-PA | 30..297 | 82..355 | 172 | 24 | Plus |
Dvir\GJ17774-PA | 709 | GJ17774-PA | 432..666 | 80..312 | 170 | 24.7 | Plus |
Dvir\GJ24581-PA | 347 | GJ24581-PA | 91..342 | 59..308 | 161 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20412-PA | 445 | GK20412-PA | 1..445 | 1..446 | 2223 | 90.6 | Plus |
Dwil\GK23911-PA | 347 | GK23911-PA | 91..342 | 59..308 | 169 | 25.6 | Plus |
Dwil\GK24403-PA | 766 | GK24403-PA | 489..723 | 80..312 | 168 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE23143-PA | 446 | GE23143-PA | 1..446 | 1..446 | 2383 | 98.2 | Plus |
Dyak\GE22240-PA | 446 | GE22240-PA | 1..446 | 1..446 | 2381 | 98 | Plus |
Dyak\GE20071-PA | 391 | GE20071-PA | 1..300 | 50..355 | 202 | 24.1 | Plus |
Dyak\GE16626-PA | 347 | GE16626-PA | 91..342 | 59..308 | 180 | 26.9 | Plus |
Dyak\GE16791-PA | 700 | GE16791-PA | 423..692 | 80..349 | 170 | 23.9 | Plus |