Clone LD28380 Report

Search the DGRC for LD28380

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:283
Well:80
Vector:pOT2
Associated Gene/TranscriptCG16972-RA
Protein status:LD28380.pep: gold
Preliminary Size:5710
Sequenced Size:5872

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG16972 2001-01-01 Release 2 assignment
CG16972 2002-04-04 Blastp of sequenced clone
CG16972 2003-01-01 Sim4 clustering to Release 3
CG16972 2008-04-29 Release 5.5 accounting
CG16972 2008-08-15 Release 5.9 accounting
CG16972 2008-12-18 5.12 accounting

Clone Sequence Records

LD28380.complete Sequence

5872 bp (5872 high quality bases) assembled on 2002-04-04

GenBank Submission: AY095039

> LD28380.complete
GATAAAGCAACTTAAAATATTAAGCCTATCAAATAAGAAATATACAACGC
ACAGCACGCAGATATACGAAAAATAACAATCGAAGGAAACCGACCAAGCC
ATGATAATGTAATCATGATCGTCCACAGTCAGTTCGGGCATTGTTTTGTA
GACAGCATCAAGTATATTTTTTAAATTTCACGTGCTAAATTTACAAGAAA
TCCTACCACAATTACTAAACGAGTCGACGAGGGCTAGATAATCCCAATCC
CATTCCCCGTACCAACGCGATGTCCAGAAGAGAAGCCAGCCTGATGGCCT
ACGTAGCGGCGGAGGAACACCTACTGAACCGGTACTCGCCGCTGGAAGGC
GACGAGATAGATACGGCCAGCGAAGCTCCAGGCGACGCATCGGACGTGGC
TGAGGATCGGGAGTATCCCACGGATCTTGTTGCATCTGTCACCAGATCCT
CGAGGACGGGAGCAGATCTGGACCCCGCCGTGGACAGCAACCTGCACGTG
ATCTCCGACGACTCGGACACCCACAGCTTTATCTCGAGTGGCAGCGGCTT
CAAGGGCTGGCCGGAGGAGCAGCCGTCTTCCAGTTTCGTCCCTCAGAATG
AACCCTTAATATTCGGACTTCGCCGGCAAATGATGATGACCGAAGAGACA
CACCAAGCCCCAGTATGGGCCACCTGCACACCGGCAAAACGTTCGTACAG
CAGCCACGAGGTCATCGAGATCAACGACTCACCCGAATCTGTCCAGGATC
CGGGCATTGCACTAAGCCCCGGCATGCTGCTGACAAATGGCAATGTTGAC
CAGTTCGAAATGCTGTCCCACGAGAATGATGAGGCTGAACATGAACTTCA
GGTGGCCGAAGAAGGGGAGCAGTGTGTGATCTATGAGGCTGTGGATGGAG
AGAACATGGTCGTTTTAGGAGAAGAACACTGCTGTGAGATCATAGTAGCT
ACCCAGGGAGTGGCATGCGAGCAGGAGTTCGCCAGGGCCATCATGATGGC
CGGAAACGGTACCGGTGCATTGCTGGGCTTGCTGTCCGAGGAGAGTGATG
CGAATGAGTGTCTCAATGGGACTGCCTACATCGAGGAGGTCGTGGAGGAT
ATGGGTGTGGCCGAGGCACGATTGGCGGCTGGAAACAATGTGTACCTTAG
TGATGCAGCGCTAGAACAGCCTTTAGTGCACCAGGATCTGGTCGACGACG
AGGCTCCGGAGGAAAACGAAAACGCCACATTCTTAGACGATACACCGATG
GAGGAGGAACGCCCAGATATTTGTCAGGTGTATGATCACGAACTGGAGGA
CCACGACGATGAAGAATGCGAGGACGCAGTCATCCAGGAAGAACCAGCCC
AGCCTATCGACATTGTAGCATTCGAGGGACAGGAGCCGCTGCCAAATAAT
CCGCAAAGAAAGTTGCTTCGCGAACACAGCAGTCCCACGGAATTTCCCGT
CAGCTCATCCTCCATGCCCAACGCCAGTGACCACTACGACTATGAGGATG
AGTTAACGGGCGGCCGCTCTCCATCCAAAGTGGCTCCACTGAAGCGAAAG
TATCCGCCGCTGATGAAGAATACGCTCCATGGAGAGGCTATGGATCGAAG
ACTGGCAAGCATTTGTCAGGCTCAGCCGCAGATGAGTCCCGCCGAGAAAG
TCTCCAACTGGGAAACGGCACCCAGGGAAGAGTGGGCCGATGTCGAGGAT
GTGGAAGGCTTTGAAGCTGCCTTCAAGCAATATGAGGCTGTTACCGCATC
ACTCAAACAGCTTAACTTTGCCGAATTCCGTGAAGCACTGGTCCGGAATA
TGGAGAAGATCAGCCGTGAAATCATGCAAACCTCAGACGAATCCACTCAA
GAGCTTGCCAGCTCTCAGTCGGCGGAACGGCCGGTGTATCGTCGCTATTT
GCACATTCTGCCCACCGAGGAGACAATTGTGCTAGATGATGATGACGACG
ATTGCTACGAGGTGGTCGGCATGGAAAAAGCCTCTGTCACCACATTGATA
CCCGAAGAGGAGCTACAGGATAATCAACAGCCGGAGGAAGAAGAGATAGT
GCTGCCAGTTGTTGATGACATAAAGAACACGGATTCACCGAATTTCGAGC
AGCGGAACCTTACCAAGGAAACATCTACAGCAGACTTGGAGAGAAGCGCG
CTTACTCAAACGGCGGGTTCATCCGCTGCGAATTTAGACGCATCCTTATC
CCATGCTCAACCTTGTCCAACTGCTCCGGCAGGACTTACTGATTTTATGC
AGGCGAACTTAAGCGACCGTGGGCCATCAGAAGACCAACAACTAACCAAA
GCTGTATTAGATGTTATGCGTCAGCAGGTGCAAACAATGCAACAGCAACA
GCAGTTTATGGAGCAAAAGATGAACCAACAACCACAGATGTATCACTACG
AGGAACTGCCACAGGCTCCCCAACAGATGCAAATGGAAGGGAATCAGGGG
CCTTACGTTAAGTATCCGAATGAGCAACAGGAATTCTGCAACTATCTGGG
TCTCACCGAACTGTCAACAGCAAATGCCGTGGCTACCGCAATGAGGGAAC
TAGCCAACAGCACTATCCCTCGCCGATCGCTGCGGGTGAGACCACAACAG
CAACTGGACAGGATGCGTAGTGATGTGCGTGGCAAGCGGCGCGAAAGGGA
GCGAGATAGGCAGCAGGATAAGGACAAGAAGATACCGTTGACCACAAGTA
GTGAGCTTAGCACCGATAAAGAAGAACCCTCCCCGCCTCAGACATCAGAA
TCCGTTTCAAGGATGGCGGGGGATGCGGATGTCCATTTCAACTCTCAAAT
GCCTGCAGAGCATAAGCGAAAACTGAATCACTTGTACAACTCTTATTTTG
CGGAAGAGGAAGAATGCTCTACGAAGAGGTCACCCAAAACCACCGACTTT
ATAGCCAGTTCCAAGTCCTTAAAGGATGTAGAGAGGCGTCCATCGCTCAA
AGGACAGGAGCCGCAACGTCATAGATCCATCATTGATGGCGACGGCTATC
AGAAACATCAGATAGACAATGAGTCTGAGAAGGGTCGGGTTCAGTCCGTT
GAGGCGGCTTTTACTAAGATCTTCGAGGCTGCCGCACCTGCCCAATCCAA
GCTGCTGGAGAGCATGCAGCAACGCTTGCGCCAGGCGCGTGAGACGAAGC
CATCAATTTATATTATTAAGGCTACAAGCAATGCCTCGCCCCCGAATCCA
TCACACAGCAGGCAGGAGTCTCACATCTCACCGGCGCCCTTGAACTTAAT
CGGCGGCTTTGGTGACGTAAGCGCGCCGCATCCTTCTGTCATTTCCCAGC
CAGCGAAGAAAAGTCCTACAATAACCAGTCCAGATAAGGAAACTCCAGCC
CCCTTACCAGTTGATACACCCAAAAAATCAAAACATAGGAAAACCCATGG
AGCCACCAAACCTGTTGCCGCTACACCACGACGCCGCACTACAATGGGTG
CATCCAGTCTCGGGAACGAAGCACGTGCACGCGATTTGGTTACCCGCTCC
ACCACGCATCTTAATTCGAAGCTACTTCGTAGCCGCAAGGTTAGTCTGCT
CAAGAGCTACGCCCTGTCGGACGAAATGGCTCAGGGACGATCGAAACGGA
TGGCTGGCGGTGCAGCACAAACCACCAAAAAGGCTCCAATGCCCAAGGCA
GCACGGACGTCGTTAAAGAAGCCGGCAGATAAAAGTCTTCCTGAGCAACA
TCGCTTGGAGCAACAGCAATTGGCTCCGCCAAACTCTCCCCGAAAGATGA
AAGGTGTCAAGGAGACTGAAACTGACACGACAAGTGCAATGAAATCTAGT
CGCCTTACTAAACGGACCAAGCGAGCACGAGCCAAGTCACTGCCTTCGAA
TATTGAAAGGGTGACTGAGCCTGTGGCAGCCGTTCCTAATGCCAATGTAT
TGAGGCTCGCTGACCTGGCACCAGAAGTGCCCAACACATTCGCGCCTACA
CACAGCCATCTGGTCAACTCCACAGCCAAAGAAGCCGCTGACAAGACCTT
CGTTCATTCCCCCTCCGTCGCTCAATCGCCTTATGCACAGCCCGTGCTTA
TTTACCCGCCATCCCCAACAACACCGCCACCGAATACGGAGCCACATCGC
CCTCGCCAGCAAGCCGGAAAAGTCAATCCAGCTGACTTAGTCCTGGCCAC
CCCTCCTGGGGGCCTGCTGCGACTCAGTCAGGGATCCGCGACGCTAGCAA
ATCCACTTTCTGCCAAGCACGGCCAGGTTCTCTATATGTACTACGAGCTG
GAACAGCTCATTGTGCTGCAGGAGAATTGCATTACCTTCTGGAAGTACTC
CAAAGTGTTCAACGTGCTGCATCAACCGCGACATAATCCCTCCTTTGATG
GCGCCAGAAAATCTCCATCTCCAAAGCTGCCTCAAACACCTTCGCGCGAG
CCCAAAGACGTCGAGCAGGAGTTGAAAATGGGCCCGCGATGGGTTTACCT
GGGCAGAGTGCGGCGCCTGACTAGCGAGAAAGAGATCTTTACGCCGTTTG
GCAGCCGCATTTGCGTGCACAATTCGACGCCGGTGTACCTGGAAATGCGA
AGCAGGCCGCTGGACCATCACAAGAGGGAGGTGAAGCTAACCTCGCTACA
TGTGAATGTGTATTACTTCTGCGAGGAGGAACTACGACCCCGTATGCACT
CTGTGCACTTGGATGCTGTCAATTGCGAATGGCCGCATGTCATATACACA
ACTATAGCGGATTCGCGTTACTTCGTTATGGCATGGCAGCAGGAACTGGT
GATGGGCAAGTCGCGCTCGGGCATTTGCAAATATTCACTGACGCCCACGC
TGGATACGCTGGCCTCCATACGGGAGTTTAAGCAGTTGCGCCACGAGCTG
CGTCACATTGAGTGCCTTTCAGAGGATCGCCTTATCGGCTACGGCCAGAT
GCGCATCACCGTCTGGGATCATCGCAGCGGCGATACTCTGATGAACTACG
ACTTGGGCCGGCCGCTGGGCCGTTGCCTGGCTGCTACGCACTATCCTAGC
CTCGACTTGGACCAAAGCAGCATGCTGGTGCTTTATCAGCTGCTTAAAGA
ACCAAACAAACCGTCTGAGGTGCATGTGATCGCCTGTGAGCTTTCCCATG
CCACGCCCTCGCACCGCCTGCTGCAGGTCCACCGCTTACCATCGCCGCAA
TTCGACGATGCCACGGAGGGCGTTAACACCGGTGATCATCTGATCATCAA
GTCAGCATCGAACGACGAAGCCTGGATAAGTGCCGCCGATCCGAGACAGC
TAACCTATTTGGCGCCGCAAATCAATGGAGCTCAGCGTTTTTATGCCCGC
CACAAGTCCCAAGTGATCGAGATGTCCCCGCAATCCCTAACTGTAGATAG
TATCGCCAATCACATGTTGAAATTGGCTGTCCAGCAGACCCAATCGGCGT
AGACCTGTGTCGCGGAACTAGAAATGTGGAGAGTCTCGGCCTTGAACAAA
GTTTTTGTTTTTTTTTCACACAAACCCATGTTTGAATATCACCCAGAATA
CCCGATCTATAAATGTGCTTTTGGCTGTCTGCCCAAGTATAGTTCAAATA
TAGGAAACTATAATAAGTTGCGTGTTAAGCCCTGTAGTCCTAACAATCAT
TTTAGTCGTAAGTAAGTCGGAGAGTAGTAGCCTTTATTATGCGCTATTTT
GAAATAAGTGTTTTTGTTTCTTTCGTTCTTTTTATTTTTTCTAAAAGAAA
AACAAAACTAGCTTAAGCTATCGTAGTTTTAGGCATATGAATTCAACTGT
TTGATTTGCTACTATCGACTGAAGTAGTAAATTTGTCATATTTTTAAGAT
TAATGGAAACACCAAAATGGAAAGAAATTAATGTCATTAAAACGGAAATC
TATTAAAAAAAAAAAAAAAAAA

LD28380.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG16972-RA 5892 CG16972-RA 27..5887 1..5859 29250 99.9 Plus
CG16972.a 5763 CG16972.a 14..5117 1..5104 25520 100 Plus
CG16972.a 5763 CG16972.a 5118..5758 5221..5859 3150 99.6 Plus
Edem2.b 3981 Edem2.b 3797..3981 5859..5675 925 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:25:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13197284..13199335 4476..2425 10245 100 Minus
chr2L 23010047 chr2L 13199392..13201090 2424..726 8450 99.8 Minus
chr2L 23010047 chr2L 13195782..13196964 5854..4675 5835 99.7 Minus
chr2L 23010047 chr2L 13201225..13201950 726..1 3600 99.7 Minus
chr2L 23010047 chr2L 13197026..13197225 4675..4476 1000 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:20:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13198603..13200654 4476..2425 10260 100 Minus
2L 23513712 2L 13200711..13202409 2424..726 8495 100 Minus
2L 23513712 2L 13197097..13198283 5859..4675 5870 99.8 Minus
2L 23513712 2L 13202544..13203269 726..1 3630 100 Minus
2L 23513712 2L 13198345..13198544 4675..4476 1000 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:56:54
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13198603..13200654 4476..2425 10260 100 Minus
2L 23513712 2L 13200711..13202409 2424..726 8495 100 Minus
2L 23513712 2L 13197097..13198283 5859..4675 5880 99.8 Minus
2L 23513712 2L 13202544..13203269 726..1 3630 100 Minus
2L 23513712 2L 13198345..13198544 4675..4476 1000 100 Minus
Blast to na_te.dros performed 2019-03-15 22:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6914 2275..2451 173 58.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2796..2957 2322..2483 143 58.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6752..6906 2275..2431 131 57.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6742..6999 2339..2608 130 55.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2300..2420 2312..2432 128 59.7 Plus

LD28380.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:26:39 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13199392..13201089 727..2424 99 <- Minus
chr2L 13195782..13196963 4676..5854 99 <- Minus
chr2L 13197026..13197224 4477..4675 100 <- Minus
chr2L 13197284..13199335 2425..4476 99 <- Minus
chr2L 13201225..13201950 1..726 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:08:04 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 1..5133 270..5402 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:57:52 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 1..5133 270..5402 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:19:36 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 1..5133 270..5402 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 14:58:03 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 1..5133 270..5402 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:22:24 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 1..5133 270..5402 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 17:23:15 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 1..5856 1..5854 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:57:52 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 1..5856 1..5854 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:19:36 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 27..5882 1..5854 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 14:58:03 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 1..5856 1..5854 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:22:24 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
CG16972-RA 27..5882 1..5854 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:26:39 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13197102..13198282 4676..5854 99 <- Minus
2L 13198345..13198543 4477..4675 100 <- Minus
2L 13198603..13200654 2425..4476 100 <- Minus
2L 13200711..13202408 727..2424 100 <- Minus
2L 13202544..13203269 1..726 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:26:39 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13197102..13198282 4676..5854 99 <- Minus
2L 13198345..13198543 4477..4675 100 <- Minus
2L 13198603..13200654 2425..4476 100 <- Minus
2L 13200711..13202408 727..2424 100 <- Minus
2L 13202544..13203269 1..726 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:26:39 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13197102..13198282 4676..5854 99 <- Minus
2L 13198345..13198543 4477..4675 100 <- Minus
2L 13198603..13200654 2425..4476 100 <- Minus
2L 13200711..13202408 727..2424 100 <- Minus
2L 13202544..13203269 1..726 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:19:36 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13198345..13198543 4477..4675 100 <- Minus
arm_2L 13197102..13198282 4676..5854 99 <- Minus
arm_2L 13198603..13200654 2425..4476 100 <- Minus
arm_2L 13200711..13202408 727..2424 100 <- Minus
arm_2L 13202544..13203269 1..726 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:34:06 Download gff for LD28380.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13197102..13198282 4676..5854 99 <- Minus
2L 13198345..13198543 4477..4675 100 <- Minus
2L 13198603..13200654 2425..4476 100 <- Minus
2L 13200711..13202408 727..2424 100 <- Minus
2L 13202544..13203269 1..726 100   Minus

LD28380.pep Sequence

Translation from 269 to 5401

> LD28380.pep
MSRREASLMAYVAAEEHLLNRYSPLEGDEIDTASEAPGDASDVAEDREYP
TDLVASVTRSSRTGADLDPAVDSNLHVISDDSDTHSFISSGSGFKGWPEE
QPSSSFVPQNEPLIFGLRRQMMMTEETHQAPVWATCTPAKRSYSSHEVIE
INDSPESVQDPGIALSPGMLLTNGNVDQFEMLSHENDEAEHELQVAEEGE
QCVIYEAVDGENMVVLGEEHCCEIIVATQGVACEQEFARAIMMAGNGTGA
LLGLLSEESDANECLNGTAYIEEVVEDMGVAEARLAAGNNVYLSDAALEQ
PLVHQDLVDDEAPEENENATFLDDTPMEEERPDICQVYDHELEDHDDEEC
EDAVIQEEPAQPIDIVAFEGQEPLPNNPQRKLLREHSSPTEFPVSSSSMP
NASDHYDYEDELTGGRSPSKVAPLKRKYPPLMKNTLHGEAMDRRLASICQ
AQPQMSPAEKVSNWETAPREEWADVEDVEGFEAAFKQYEAVTASLKQLNF
AEFREALVRNMEKISREIMQTSDESTQELASSQSAERPVYRRYLHILPTE
ETIVLDDDDDDCYEVVGMEKASVTTLIPEEELQDNQQPEEEEIVLPVVDD
IKNTDSPNFEQRNLTKETSTADLERSALTQTAGSSAANLDASLSHAQPCP
TAPAGLTDFMQANLSDRGPSEDQQLTKAVLDVMRQQVQTMQQQQQFMEQK
MNQQPQMYHYEELPQAPQQMQMEGNQGPYVKYPNEQQEFCNYLGLTELST
ANAVATAMRELANSTIPRRSLRVRPQQQLDRMRSDVRGKRRERERDRQQD
KDKKIPLTTSSELSTDKEEPSPPQTSESVSRMAGDADVHFNSQMPAEHKR
KLNHLYNSYFAEEEECSTKRSPKTTDFIASSKSLKDVERRPSLKGQEPQR
HRSIIDGDGYQKHQIDNESEKGRVQSVEAAFTKIFEAAAPAQSKLLESMQ
QRLRQARETKPSIYIIKATSNASPPNPSHSRQESHISPAPLNLIGGFGDV
SAPHPSVISQPAKKSPTITSPDKETPAPLPVDTPKKSKHRKTHGATKPVA
ATPRRRTTMGASSLGNEARARDLVTRSTTHLNSKLLRSRKVSLLKSYALS
DEMAQGRSKRMAGGAAQTTKKAPMPKAARTSLKKPADKSLPEQHRLEQQQ
LAPPNSPRKMKGVKETETDTTSAMKSSRLTKRTKRARAKSLPSNIERVTE
PVAAVPNANVLRLADLAPEVPNTFAPTHSHLVNSTAKEAADKTFVHSPSV
AQSPYAQPVLIYPPSPTTPPPNTEPHRPRQQAGKVNPADLVLATPPGGLL
RLSQGSATLANPLSAKHGQVLYMYYELEQLIVLQENCITFWKYSKVFNVL
HQPRHNPSFDGARKSPSPKLPQTPSREPKDVEQELKMGPRWVYLGRVRRL
TSEKEIFTPFGSRICVHNSTPVYLEMRSRPLDHHKREVKLTSLHVNVYYF
CEEELRPRMHSVHLDAVNCEWPHVIYTTIADSRYFVMAWQQELVMGKSRS
GICKYSLTPTLDTLASIREFKQLRHELRHIECLSEDRLIGYGQMRITVWD
HRSGDTLMNYDLGRPLGRCLAATHYPSLDLDQSSMLVLYQLLKEPNKPSE
VHVIACELSHATPSHRLLQVHRLPSPQFDDATEGVNTGDHLIIKSASNDE
AWISAADPRQLTYLAPQINGAQRFYARHKSQVIEMSPQSLTVDSIANHML
KLAVQQTQSA*

LD28380.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:29:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14335-PA 1725 GF14335-PA 1..1697 1..1704 4383 56.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:29:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10223-PA 1709 GG10223-PA 1..1709 1..1710 7234 83 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:29:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10640-PA 1667 GH10640-PA 686..1648 735..1705 1930 46.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:06:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG16972-PA 1710 CG16972-PA 1..1710 1..1710 8865 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:29:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\Tes105-PA 1692 GI10749-PA 11..751 6..789 803 35.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:29:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26700-PA 1709 GL26700-PA 56..1678 67..1704 3441 48.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:29:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14246-PA 1697 GA14246-PA 56..1666 67..1704 3441 48 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:29:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25801-PA 1568 GM25801-PA 1..1326 1..1323 5954 91.2 Plus
Dsec\GM25801-PA 1568 GM25801-PA 1332..1568 1474..1710 1296 98.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:29:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22080-PA 1156 GD22080-PA 1..1135 1..1122 5098 90.9 Plus
Dsim\GD22081-PA 536 GD22081-PA 1..536 1160..1710 2620 91.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:29:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18278-PA 516 GJ18278-PA 1..462 1..468 611 37.2 Plus
Dvir\GJ18279-PA 969 GJ18279-PA 44..98 734..788 260 89.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:29:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15572-PA 1862 GK15572-PA 792..1846 702..1710 2275 48.1 Plus
Dwil\GK15572-PA 1862 GK15572-PA 14..666 10..623 1031 42.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:29:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11864-PA 1720 GE11864-PA 1..1720 1..1710 7293 84 Plus

LD28380.hyp Sequence

Translation from 269 to 5401

> LD28380.hyp
MSRREASLMAYVAAEEHLLNRYSPLEGDEIDTASEAPGDASDVAEDREYP
TDLVASVTRSSRTGADLDPAVDSNLHVISDDSDTHSFISSGSGFKGWPEE
QPSSSFVPQNEPLIFGLRRQMMMTEETHQAPVWATCTPAKRSYSSHEVIE
INDSPESVQDPGIALSPGMLLTNGNVDQFEMLSHENDEAEHELQVAEEGE
QCVIYEAVDGENMVVLGEEHCCEIIVATQGVACEQEFARAIMMAGNGTGA
LLGLLSEESDANECLNGTAYIEEVVEDMGVAEARLAAGNNVYLSDAALEQ
PLVHQDLVDDEAPEENENATFLDDTPMEEERPDICQVYDHELEDHDDEEC
EDAVIQEEPAQPIDIVAFEGQEPLPNNPQRKLLREHSSPTEFPVSSSSMP
NASDHYDYEDELTGGRSPSKVAPLKRKYPPLMKNTLHGEAMDRRLASICQ
AQPQMSPAEKVSNWETAPREEWADVEDVEGFEAAFKQYEAVTASLKQLNF
AEFREALVRNMEKISREIMQTSDESTQELASSQSAERPVYRRYLHILPTE
ETIVLDDDDDDCYEVVGMEKASVTTLIPEEELQDNQQPEEEEIVLPVVDD
IKNTDSPNFEQRNLTKETSTADLERSALTQTAGSSAANLDASLSHAQPCP
TAPAGLTDFMQANLSDRGPSEDQQLTKAVLDVMRQQVQTMQQQQQFMEQK
MNQQPQMYHYEELPQAPQQMQMEGNQGPYVKYPNEQQEFCNYLGLTELST
ANAVATAMRELANSTIPRRSLRVRPQQQLDRMRSDVRGKRRERERDRQQD
KDKKIPLTTSSELSTDKEEPSPPQTSESVSRMAGDADVHFNSQMPAEHKR
KLNHLYNSYFAEEEECSTKRSPKTTDFIASSKSLKDVERRPSLKGQEPQR
HRSIIDGDGYQKHQIDNESEKGRVQSVEAAFTKIFEAAAPAQSKLLESMQ
QRLRQARETKPSIYIIKATSNASPPNPSHSRQESHISPAPLNLIGGFGDV
SAPHPSVISQPAKKSPTITSPDKETPAPLPVDTPKKSKHRKTHGATKPVA
ATPRRRTTMGASSLGNEARARDLVTRSTTHLNSKLLRSRKVSLLKSYALS
DEMAQGRSKRMAGGAAQTTKKAPMPKAARTSLKKPADKSLPEQHRLEQQQ
LAPPNSPRKMKGVKETETDTTSAMKSSRLTKRTKRARAKSLPSNIERVTE
PVAAVPNANVLRLADLAPEVPNTFAPTHSHLVNSTAKEAADKTFVHSPSV
AQSPYAQPVLIYPPSPTTPPPNTEPHRPRQQAGKVNPADLVLATPPGGLL
RLSQGSATLANPLSAKHGQVLYMYYELEQLIVLQENCITFWKYSKVFNVL
HQPRHNPSFDGARKSPSPKLPQTPSREPKDVEQELKMGPRWVYLGRVRRL
TSEKEIFTPFGSRICVHNSTPVYLEMRSRPLDHHKREVKLTSLHVNVYYF
CEEELRPRMHSVHLDAVNCEWPHVIYTTIADSRYFVMAWQQELVMGKSRS
GICKYSLTPTLDTLASIREFKQLRHELRHIECLSEDRLIGYGQMRITVWD
HRSGDTLMNYDLGRPLGRCLAATHYPSLDLDQSSMLVLYQLLKEPNKPSE
VHVIACELSHATPSHRLLQVHRLPSPQFDDATEGVNTGDHLIIKSASNDE
AWISAADPRQLTYLAPQINGAQRFYARHKSQVIEMSPQSLTVDSIANHML
KLAVQQTQSA*

LD28380.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:19:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG16972-PA 1710 CG16972-PA 1..1710 1..1710 8865 100 Plus