BDGP Sequence Production Resources |
Search the DGRC for LD28404
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 284 |
Well: | 4 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7168-RA |
Protein status: | LD28404.pep: gold |
Preliminary Size: | 1081 |
Sequenced Size: | 997 |
Gene | Date | Evidence |
---|---|---|
CG7168 | 2001-01-01 | Release 2 assignment |
CG7168 | 2001-10-10 | Blastp of sequenced clone |
CG7168 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7168 | 2008-04-29 | Release 5.5 accounting |
CG7168 | 2008-08-15 | Release 5.9 accounting |
CG7168 | 2008-12-18 | 5.12 accounting |
997 bp (997 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061355
> LD28404.complete TAAATGTTAAGTTTATGCAGCTAAAATAAGGTGCTACTGGAGAATGCAAT CAAAATGATGATGATGATCATAATTGAACTATTTTGGTAGTTTCCAAGTA TGCATTTCAAACTCTAAGGGATACGCTGAAGTACAGCCGCAGGACGTAAG TCTCAAGAAGTCAACACATCAAACTTTTTAAGTGAGGCAACCAACCACAA AGATGTCATCTCTGCGCTTAACTCAACAACAGCGCAATCATTTGAGCCTG CTCCAAAAACCCGCCAGCGCTGTGGTGGAGCTGTGCAAGTCCGCCTTTGA TTACCTAATAAATGGACCCAATCCCAGCCGTTACGAGATGCTAGCCAAAA AGTCCTCCGATTTGGGCAGTCCTGAGGCAGTGCAGCAGGCGGTGGAGGCG CTGATATCCCTGCTCATCAGCGTGACCACCCGAGTGGGGAGCAGTTCCGT CGACATGGAGGCCATACTGCGCCAGACATTCCCCGAACTCGGCGACGATG TGATAGAAGTTCTCGAGCAGTTCGTCACCAGCAAACGAAACTTTGTGGAG GGCTCAATCAAGTCGGCCAACATACGTGCCTATCGGCTGGTCAACCTGGA CTGGCGACTGGAGGTGCGCACCGCGTCGCGGAGCCTGCTGGATCAGTGTC AGGTGGTGGTGACTATGAAGCTATATCTGCACACCGAACCGAAGAATGAA AACCGAGAGCTGCTGGCGGTGGACATCTCCGGGCGCAGCGAACAGGAGCT GAAGGCCATGCAGGAGGACGAGCGGCTGCATCGAAAGGATTTGCTAGTGC AGACGGATGTCTGCAGTCTGGTGCACATGATCAAAACGCTGGAGGACGCG TTGGCCGAGTCCAAGACGCGGCGCATTCGCAATATTGTCGACGGAATACA CTGATACGACTCCAGAACTCATACACTTGTTAAAGCTAATTTAATCAGGA CCAATTTATTACAACTAAAATTAACTAGAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7168-RA | 1058 | CG7168-RA | 65..1043 | 1..979 | 4895 | 100 | Plus |
CG7168.a | 1073 | CG7168.a | 220..1073 | 125..978 | 4270 | 100 | Plus |
CG7168.b | 1065 | CG7168.b | 213..1065 | 126..978 | 4265 | 100 | Plus |
CG7168.a | 1073 | CG7168.a | 81..205 | 1..125 | 625 | 100 | Plus |
CG7168.b | 1065 | CG7168.b | 81..205 | 1..125 | 625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 14049196..14049993 | 978..181 | 3990 | 100 | Minus |
chr3R | 27901430 | chr3R | 14050196..14050320 | 125..1 | 625 | 100 | Minus |
chr3R | 27901430 | chr3R | 14050070..14050127 | 182..125 | 290 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 18224901..18225699 | 979..181 | 3995 | 100 | Minus |
3R | 32079331 | 3R | 18225902..18226026 | 125..1 | 625 | 100 | Minus |
3R | 32079331 | 3R | 18225776..18225833 | 182..125 | 290 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 17965732..17966530 | 979..181 | 3995 | 100 | Minus |
3R | 31820162 | 3R | 17966733..17966857 | 125..1 | 625 | 100 | Minus |
3R | 31820162 | 3R | 17966607..17966664 | 182..125 | 290 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14049196..14049991 | 183..978 | 100 | <- | Minus |
chr3R | 14050070..14050126 | 126..182 | 100 | <- | Minus |
chr3R | 14050196..14050320 | 1..125 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 1..702 | 203..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 1..702 | 203..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 1..702 | 203..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 1..702 | 203..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 1..702 | 203..904 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 22..200 | 1..179 | 100 | == | Plus |
CG7168-RA | 201..979 | 200..978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 22..999 | 1..978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 57..1034 | 1..978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 22..200 | 1..179 | 100 | == | Plus |
CG7168-RA | 201..979 | 200..978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7168-RA | 57..1034 | 1..978 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18225902..18226026 | 1..125 | 100 | Minus | |
3R | 18224902..18225697 | 183..978 | 100 | <- | Minus |
3R | 18225776..18225832 | 126..182 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18225902..18226026 | 1..125 | 100 | Minus | |
3R | 18224902..18225697 | 183..978 | 100 | <- | Minus |
3R | 18225776..18225832 | 126..182 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18225902..18226026 | 1..125 | 100 | Minus | |
3R | 18224902..18225697 | 183..978 | 100 | <- | Minus |
3R | 18225776..18225832 | 126..182 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14050624..14051419 | 183..978 | 100 | <- | Minus |
arm_3R | 14051498..14051554 | 126..182 | 100 | <- | Minus |
arm_3R | 14051624..14051748 | 1..125 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17965733..17966528 | 183..978 | 100 | <- | Minus |
3R | 17966607..17966663 | 126..182 | 100 | <- | Minus |
3R | 17966733..17966857 | 1..125 | 100 | Minus |
Translation from 202 to 903
> LD28404.pep MSSLRLTQQQRNHLSLLQKPASAVVELCKSAFDYLINGPNPSRYEMLAKK SSDLGSPEAVQQAVEALISLLISVTTRVGSSSVDMEAILRQTFPELGDDV IEVLEQFVTSKRNFVEGSIKSANIRAYRLVNLDWRLEVRTASRSLLDQCQ VVVTMKLYLHTEPKNENRELLAVDISGRSEQELKAMQEDERLHRKDLLVQ TDVCSLVHMIKTLEDALAESKTRRIRNIVDGIH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23154-PA | 233 | GF23154-PA | 1..233 | 1..233 | 966 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16629-PA | 233 | GG16629-PA | 1..233 | 1..233 | 1158 | 94 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19033-PA | 228 | GH19033-PA | 1..228 | 1..233 | 891 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7168-PA | 233 | CG7168-PA | 1..233 | 1..233 | 1149 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22845-PA | 231 | GI22845-PA | 1..231 | 1..233 | 888 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12601-PA | 177 | GL12601-PA | 108..177 | 164..233 | 295 | 82.9 | Plus |
Dper\GL12601-PA | 177 | GL12601-PA | 1..73 | 1..71 | 148 | 51.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20150-PA | 234 | GA20150-PA | 1..234 | 1..233 | 1016 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15316-PA | 233 | GM15316-PA | 1..233 | 1..233 | 1181 | 95.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20193-PA | 233 | GD20193-PA | 1..233 | 1..233 | 1185 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24704-PA | 231 | GJ24704-PA | 1..231 | 1..233 | 909 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22787-PA | 239 | GK22787-PA | 3..239 | 6..233 | 887 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25227-PA | 233 | GE25227-PA | 1..233 | 1..233 | 1134 | 91.8 | Plus |
Translation from 202 to 903
> LD28404.hyp MSSLRLTQQQRNHLSLLQKPASAVVELCKSAFDYLINGPNPSRYEMLAKK SSDLGSPEAVQQAVEALISLLISVTTRVGSSSVDMEAILRQTFPELGDDV IEVLEQFVTSKRNFVEGSIKSANIRAYRLVNLDWRLEVRTASRSLLDQCQ VVVTMKLYLHTEPKNENRELLAVDISGRSEQELKAMQEDERLHRKDLLVQ TDVCSLVHMIKTLEDALAESKTRRIRNIVDGIH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7168-PA | 233 | CG7168-PA | 1..233 | 1..233 | 1149 | 100 | Plus |