BDGP Sequence Production Resources |
Search the DGRC for LD28447
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 284 |
Well: | 47 |
Vector: | pOT2 |
Associated Gene/Transcript | CG14657-RB |
Protein status: | LD28447.pep: gold |
Preliminary Size: | 2505 |
Sequenced Size: | 2415 |
Gene | Date | Evidence |
---|---|---|
CG14657 | 2001-01-01 | Release 2 assignment |
CG14657 | 2001-10-10 | Blastp of sequenced clone |
CG14657 | 2003-01-01 | Sim4 clustering to Release 3 |
CG14657 | 2008-04-29 | Release 5.5 accounting |
CG14657 | 2008-08-15 | Release 5.9 accounting |
CG14657 | 2008-12-18 | 5.12 accounting |
2415 bp (2415 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061357
> LD28447.complete AGCTGCTTGTGAATGAAAAAAGCGTAATATCGAATCGTACAACAAATTCG CGATAATCCACTGCCGCCCGTCCTGCAAAATCACAGATCCGCGAACTGAT ACACAAGCGGATAAGAGAAGAGGCCAGTAGGCCAAAGCTAACCCTGCCAG GACAAAATCGAGTCGTTCGTTCCACCGGCACACAATGGAGCTACTATAGT GTGTGTGTGTGTGTGCGAGAGTGCGGGCGCTTGTGAGCGTGGTTGTAGTA GTGGGCGAGTGCGTGTAGTAGTAGTACGACGAGTGTTGTGGCGACGGGGA AAACAAAAAGAAATCTAGTTTGTGCTCAAGACTTCGGCTGGAAACCCGGC CGCGAAGAGTGCGTAGATGTGAGGTGCGATCGCTGATGAGCCATCACCTC TTCCCGGTGCTGGAGGCAGTGCATCCGACCGGAGAAGTTGAGGGACTCTA GGCTAGCGGGGCAGTAATACGGCCACATCCCGTTTCCGATTCCGTAATGC TGCTGGCCGCAGCCGGTCCACCGGCTTACGACGCCGGAAAACTGTCCAAC AATGCCGGATCCGGATCCAGCAACGTGGGCTCCGGCGGAGTGGGTACGCC CACGGCGTCCTCGTCGCGTCCTAGTGCCGCTAGTGCCCTGATGAAGACCC TGTCTGTGCGCCTGCATCGAGGCACCGAGTTCATTAAGGACACCGTTCAT AAGGCCCTGGTCATGTCCGCTCCAACGCCTGTGGCCCCAGCTACAGCTCC TGCGCCCAAGATCGTGGACCACAGCCTAAAGCGAAAACTAAGCGGCGCTG GCGGGCTGATGGGCTGCAGCAGCATTGGCAGCATGACCTCATCTATCGCC GGCAGCTCGAGAAGTCACCACTATGCACTGACTAGCCAGGTGGCCTCGTC ACAGGTGATTCCTTTGCCCAGTCAAGTGCCAACAGCCGCCTTTCTGCGCA CCTACACTGTGGCTCCCACGGCACTCCATCGATCTGCCGCCGCTCGCAAA CGGAATCCCAGCACCGACAGCCTGCTTATGGACCTGTGCCTCTTTAAGCC CATTCGGCCCATGCCCATAACGCCAATAAAAATCCACAAGTTCCGCGGAT TTGAAGTGAAGAAACCAAAATTTGTCCCCGCTGGAAATCCAGACAGCGAA GATGATGAGGACAACGACGAAGATGGGACGGTCCGCAAGCCAAAGCCCAG CAACTTGACATTGCCAACAATTTCGGACTCGGCCTTCGTTCCGATGCCCT ATATAGAAACCACCAACACCGCCATTAACGCAACCACCACCACTAACAGC GGGAGCAGATCCCGCTCTCTCAACACACACACCTCAGGCTCTGCCCAGGC CATAACCAAGCCAAAGCGTCGTCGTCGCGCTCCCATGCTCACGGCCAAAA GACGACGCAAGGCCCTGGATACGGAATTAACAACTTCAGCAGATGCTGGA ACTGAAGACAAAGCTCCTGCCGTGCGCAAAGCGACGGCAGCACGCGGAGG ATCCAAGCGCAGTCGAGGAGAATCGATTACGGCTCCTACGCCAGCGGAAC CAATCAAATCTCCAGTAGCAATAAAAGCTCCGACCAAGCGCAAATCAACC TCTAGAAGTGAAGCTGCAAAACGTAGTCGTGTAGCCTCTGTGCAGAATGA CACTGTTCTCACAGCGACATCCACCACTTCAGCAGATTCAATTAGAAAAG CCGCAACCAAGCGCATTGCTGCTAATGAAAAAGTCGCCAAGCGCAGTCGT GGTTCCGCAGCCTTGTCTGCGCGTCCTTCCCCGCCAATGACACGTCAGCG GGCTCGTCAGCAGATCTCCGCAAGCACCTAAGGTCTAAAAAACTTCAATA CTCGCTCATTGGAACGTAAGCCCATATGGCAAAAGCTAGAAAAGCTAGAA CAAAACAACACTAGGAAAGAGTCGCGTAAGAGATTCGCTAAGTTCTGAGT CTTTGGGTTCTAGTTACTGTTTTTGTGTACGTAATACATATTTCCGTTGA AGTAGGTGGAAATGTAAGATAAGCCAGTAATCATGTAAAGTACACGTAGT GTTCAACTCGTTTCGTATTATTCGGGACATAATATGACTACTTAAGTTTA AAAAAGCAACCATAATTTTTTTGGGTACACATATTACAGAATTCTGGCTT GGTCTTCAAGACTGATATAACAAAAAGCATCCGCTACGAATAAAATATGA TACAAAATGATATATGCAAAAGAAATTTAACCCTCATTGAGCAAAAAGTA TTAAATGTATAAAGAAACTAGTTCATTTAAGTCATTCCTGATGTCACTGT TTGTAAACGTATTGATATGCTAGTTTTGATCCTATTCTTTCAATGAATGT ACAAAGTTCAACGTTTTCGGTTCGTTTAGTTTATGTGCTTGCCTTTGAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 644237..645435 | 2397..1199 | 5995 | 100 | Minus |
chr3R | 27901430 | chr3R | 646029..647111 | 1083..1 | 5415 | 100 | Minus |
chr3R | 27901430 | chr3R | 645490..645606 | 1200..1084 | 585 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4818540..4819739 | 2398..1199 | 6000 | 100 | Minus |
3R | 32079331 | 3R | 4820333..4821415 | 1083..1 | 5415 | 100 | Minus |
3R | 32079331 | 3R | 4819794..4819910 | 1200..1084 | 585 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4559371..4560570 | 2398..1199 | 6000 | 100 | Minus |
3R | 31820162 | 3R | 4561164..4562246 | 1083..1 | 5415 | 100 | Minus |
3R | 31820162 | 3R | 4560625..4560741 | 1200..1084 | 585 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 644237..645433 | 1201..2397 | 100 | <- | Minus |
chr3R | 645490..645606 | 1084..1200 | 100 | <- | Minus |
chr3R | 646029..647111 | 1..1083 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 1..1335 | 497..1831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 1..1335 | 497..1831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 1..1335 | 497..1831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 1..1335 | 497..1831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 1..1335 | 497..1831 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 14..2410 | 1..2397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 14..2410 | 1..2397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 18..2414 | 1..2397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 14..2410 | 1..2397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG14657-RB | 18..2414 | 1..2397 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4818541..4819737 | 1201..2397 | 100 | <- | Minus |
3R | 4819794..4819910 | 1084..1200 | 100 | <- | Minus |
3R | 4820333..4821415 | 1..1083 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4818541..4819737 | 1201..2397 | 100 | <- | Minus |
3R | 4819794..4819910 | 1084..1200 | 100 | <- | Minus |
3R | 4820333..4821415 | 1..1083 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4818541..4819737 | 1201..2397 | 100 | <- | Minus |
3R | 4819794..4819910 | 1084..1200 | 100 | <- | Minus |
3R | 4820333..4821415 | 1..1083 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 645516..645632 | 1084..1200 | 100 | <- | Minus |
arm_3R | 644263..645459 | 1201..2397 | 100 | <- | Minus |
arm_3R | 646055..647137 | 1..1083 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4559372..4560568 | 1201..2397 | 100 | <- | Minus |
3R | 4560625..4560741 | 1084..1200 | 100 | <- | Minus |
3R | 4561164..4562246 | 1..1083 | 100 | Minus |
Translation from 496 to 1830
> LD28447.pep MLLAAAGPPAYDAGKLSNNAGSGSSNVGSGGVGTPTASSSRPSAASALMK TLSVRLHRGTEFIKDTVHKALVMSAPTPVAPATAPAPKIVDHSLKRKLSG AGGLMGCSSIGSMTSSIAGSSRSHHYALTSQVASSQVIPLPSQVPTAAFL RTYTVAPTALHRSAAARKRNPSTDSLLMDLCLFKPIRPMPITPIKIHKFR GFEVKKPKFVPAGNPDSEDDEDNDEDGTVRKPKPSNLTLPTISDSAFVPM PYIETTNTAINATTTTNSGSRSRSLNTHTSGSAQAITKPKRRRRAPMLTA KRRRKALDTELTTSADAGTEDKAPAVRKATAARGGSKRSRGESITAPTPA EPIKSPVAIKAPTKRKSTSRSEAAKRSRVASVQNDTVLTATSTTSADSIR KAATKRIAANEKVAKRSRGSAALSARPSPPMTRQRARQQISAST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16084-PA | 467 | GF16084-PA | 1..466 | 1..443 | 967 | 58.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11333-PA | 443 | GG11333-PA | 1..442 | 1..443 | 1622 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17407-PA | 425 | GH17407-PA | 75..363 | 46..305 | 541 | 46.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14657-PC | 444 | CG14657-PC | 1..444 | 1..444 | 2210 | 100 | Plus |
CG14657-PB | 444 | CG14657-PB | 1..444 | 1..444 | 2210 | 100 | Plus |
CG14657-PD | 196 | CG14657-PD | 1..196 | 1..196 | 981 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22509-PA | 412 | GI22509-PA | 44..347 | 20..305 | 525 | 48.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22217-PA | 476 | GL22217-PA | 1..470 | 1..444 | 835 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13152-PA | 476 | GA13152-PA | 1..470 | 1..444 | 837 | 51.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10676-PA | 445 | GM10676-PA | 1..445 | 1..444 | 1695 | 93.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19651-PA | 445 | GD19651-PA | 1..445 | 1..444 | 1667 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10112-PA | 423 | GJ10112-PA | 1..295 | 1..249 | 504 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14420-PA | 434 | GK14420-PA | 1..331 | 1..307 | 679 | 53.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25327-PA | 444 | GE25327-PA | 1..443 | 1..443 | 1529 | 82.6 | Plus |
Translation from 496 to 1830
> LD28447.hyp MLLAAAGPPAYDAGKLSNNAGSGSSNVGSGGVGTPTASSSRPSAASALMK TLSVRLHRGTEFIKDTVHKALVMSAPTPVAPATAPAPKIVDHSLKRKLSG AGGLMGCSSIGSMTSSIAGSSRSHHYALTSQVASSQVIPLPSQVPTAAFL RTYTVAPTALHRSAAARKRNPSTDSLLMDLCLFKPIRPMPITPIKIHKFR GFEVKKPKFVPAGNPDSEDDEDNDEDGTVRKPKPSNLTLPTISDSAFVPM PYIETTNTAINATTTTNSGSRSRSLNTHTSGSAQAITKPKRRRRAPMLTA KRRRKALDTELTTSADAGTEDKAPAVRKATAARGGSKRSRGESITAPTPA EPIKSPVAIKAPTKRKSTSRSEAAKRSRVASVQNDTVLTATSTTSADSIR KAATKRIAANEKVAKRSRGSAALSARPSPPMTRQRARQQISAST*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG14657-PC | 444 | CG14657-PC | 1..444 | 1..444 | 2210 | 100 | Plus |
CG14657-PB | 444 | CG14657-PB | 1..444 | 1..444 | 2210 | 100 | Plus |
CG14657-PD | 196 | CG14657-PD | 1..196 | 1..196 | 981 | 100 | Plus |