BDGP Sequence Production Resources |
Search the DGRC for LD28544
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 285 |
Well: | 44 |
Vector: | pOT2 |
Associated Gene/Transcript | cN-IIIB-RA |
Protein status: | LD28544.pep: gold |
Preliminary Size: | 1624 |
Sequenced Size: | 1505 |
Gene | Date | Evidence |
---|---|---|
CG3362 | 2001-01-01 | Release 2 assignment |
CG3362 | 2001-10-10 | Blastp of sequenced clone |
CG3362 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3362 | 2008-04-29 | Release 5.5 accounting |
CG3362 | 2008-08-15 | Release 5.9 accounting |
CG3362 | 2008-12-18 | 5.12 accounting |
1505 bp (1505 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061358
> LD28544.complete TTTAAACTAAATCCATTGTTGTTTACACAGCGCTTTAACTAAATTTTGGA CACAGTCTATATCAATAAAAGCTTGTCACGGCGGAGCTTCGATAGCCAGC TGATAACTGCGAGTGCTGCAACAAGACCAACAAAGTTGGCAAAATACTCC TCCAAGGTCAGCCTTAGATATAGAGCCAACAGCACAGGTGATCGGCATAA ATCGCTTGCCTAAACAATTTGCAAATATCGTTGGTATCGATCGCGGTGAT CTATTCGCACAGAGTGCAGACACTCTGTCACTGTGATCAGGGGAAGACCT CTCAGCTGCTGGACGAGAAGACTGCTCAAAATGGGCTTTGACGAGAAGCG TGAGCCCACCGGCGGCAGACTGCGACTGCAGGACATTCCGGCCCTCACCC AGGACCACTGCCGCATGCGGGATCCGGCGGAGGTGGAGCGCATCATCAAC GAGTTCGTCATCGGCGGACCAGAGCGCATGCAAATCGTCTCCGACTTCGA CTACACCATCACCAAGCAGCGCACGGAGGATGGAGGAGCAGTGCCCTCCA GTTTCGGGATCTTCAACGCCTGCCAGTCGCTGCCGGAAAACTTTAAGGCG GAGACGGACAAGCTGTACCACAAGTACCGGCCCATTGAGATCGATCCCCA CATGCCCATCGCCGAGAAGGTGCAGTACATGATCGAGTGGTGGACCAAGT CTGGCGAACTGACCAGCGGCTTCCCCTTCGACCAGTCGGAAATAGATCAG ATAGCCAGCAAGTACACGCATGCGCTACGTGACCGCACCCACGAGTTCTT TGCGGACCTCCAGCGCTTGGGCATTCCCACGCTTGTCTTCTCCGCCGGGC TGGGCAACTCGGTGGTCTCGGTTCTTCGCCAGGCCAACGTTTTGCATCCG AACGTGAAGGTAGTCTCGAACTTTCTTCAGTTCCGGGATGGCCTTCTAGA TGGCTTTCAGCAGCCGATGATACACACCTTCAACAAGAACGAAACGGTGC TAAATGAGACCAGCGAGTATTACGACTTGGTGCACACCAGGGACCACATC ATAGTCATGGGCGACTCAATTGGTGATGCAGACATGGCCTCCGGGGTGCC TGCCTCCTCACACATCATGAAAATCGGCTTCCTCTTCGACCACGTAGAAG CCAACATGAAGAAGTACATGGACACCTTTGACATAGTGCTCGTCGATGAC CAGACCATGGACGTGCCCAGGACCCTGCTCTCCCTCATCGAGAAGCAACA CAAGCTGAACCTGGAGGCCCCCAAGCAGAGCTCCCTATAATTCCCGCAGG GAGTTCACGAATTCACTCTGAAATGTACTCGTGCCGCTTCTGCTCTCTCA TTAGCAGGCTAGTTGCTGACCGGAACACAACAGAAGCTACTAATTAGGTG GTTAGGCTTAAACATTCTACTCATCTTAACGAATGAATGTATACTTCATG GACACAAATTATATTAAAGACAACTTTGTGCATTGCAAAAAAAAAAAAAA AAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3362-RA | 1488 | CG3362-RA | 1..1488 | 1..1488 | 7440 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 20081560..20083045 | 1..1486 | 7340 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 24195542..24197030 | 1..1489 | 7445 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 24196741..24198229 | 1..1489 | 7445 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 20081560..20083045 | 1..1486 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3362-RA | 1..960 | 331..1290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3362-RA | 1..960 | 331..1290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3362-RA | 1..960 | 331..1290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3362-RA | 1..960 | 331..1290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cN-IIIB-RA | 1..960 | 331..1290 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3362-RA | 1..1486 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3362-RA | 1..1486 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3362-RA | 45..1530 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3362-RA | 1..1486 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cN-IIIB-RA | 45..1530 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24195542..24197027 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24195542..24197027 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24195542..24197027 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 20083065..20084550 | 1..1486 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 24196759..24198244 | 1..1486 | 100 | Plus |
Translation from 330 to 1289
> LD28544.hyp MGFDEKREPTGGRLRLQDIPALTQDHCRMRDPAEVERIINEFVIGGPERM QIVSDFDYTITKQRTEDGGAVPSSFGIFNACQSLPENFKAETDKLYHKYR PIEIDPHMPIAEKVQYMIEWWTKSGELTSGFPFDQSEIDQIASKYTHALR DRTHEFFADLQRLGIPTLVFSAGLGNSVVSVLRQANVLHPNVKVVSNFLQ FRDGLLDGFQQPMIHTFNKNETVLNETSEYYDLVHTRDHIIVMGDSIGDA DMASGVPASSHIMKIGFLFDHVEANMKKYMDTFDIVLVDDQTMDVPRTLL SLIEKQHKLNLEAPKQSSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cN-IIIB-PA | 319 | CG3362-PA | 1..319 | 1..319 | 1669 | 100 | Plus |
Translation from 330 to 1289
> LD28544.pep MGFDEKREPTGGRLRLQDIPALTQDHCRMRDPAEVERIINEFVIGGPERM QIVSDFDYTITKQRTEDGGAVPSSFGIFNACQSLPENFKAETDKLYHKYR PIEIDPHMPIAEKVQYMIEWWTKSGELTSGFPFDQSEIDQIASKYTHALR DRTHEFFADLQRLGIPTLVFSAGLGNSVVSVLRQANVLHPNVKVVSNFLQ FRDGLLDGFQQPMIHTFNKNETVLNETSEYYDLVHTRDHIIVMGDSIGDA DMASGVPASSHIMKIGFLFDHVEANMKKYMDTFDIVLVDDQTMDVPRTLL SLIEKQHKLNLEAPKQSSL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11383-PA | 320 | GF11383-PA | 1..320 | 1..319 | 1485 | 86.3 | Plus |
Dana\GF11380-PA | 309 | GF11380-PA | 15..308 | 14..308 | 1113 | 67.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22952-PA | 319 | GG22952-PA | 1..319 | 1..319 | 1594 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20977-PA | 320 | GH20977-PA | 7..303 | 12..309 | 1237 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cN-IIIB-PA | 319 | CG3362-PA | 1..319 | 1..319 | 1669 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21312-PA | 331 | GI21312-PA | 7..311 | 4..309 | 1287 | 75.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19990-PA | 318 | GL19990-PA | 1..318 | 1..319 | 1469 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17406-PA | 318 | GA17406-PA | 1..318 | 1..319 | 1469 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18318-PA | 319 | GM18318-PA | 1..319 | 1..319 | 1671 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11843-PA | 319 | GD11843-PA | 1..319 | 1..319 | 1682 | 97.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21581-PA | 328 | GJ21581-PA | 10..311 | 7..309 | 1340 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15779-PA | 322 | GK15779-PA | 1..310 | 1..312 | 1280 | 77.7 | Plus |
Dwil\GK15781-PA | 271 | GK15781-PA | 9..271 | 4..309 | 310 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14389-PA | 319 | GE14389-PA | 1..319 | 1..319 | 1646 | 95.9 | Plus |