BDGP Sequence Production Resources |
Search the DGRC for LD28592
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 285 |
Well: | 92 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3925-RA |
Protein status: | LD28592.pep: gold |
Preliminary Size: | 2311 |
Sequenced Size: | 2089 |
Gene | Date | Evidence |
---|---|---|
CG3925 | 2002-01-01 | Sim4 clustering to Release 2 |
CG3925 | 2002-05-18 | Blastp of sequenced clone |
CG3925 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3925 | 2008-04-29 | Release 5.5 accounting |
CG3925 | 2008-08-15 | Release 5.9 accounting |
CG3925 | 2008-12-18 | 5.12 accounting |
2089 bp (2089 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118943
> LD28592.complete CGAAAAGCTCCCATCTCTTATTTTCCTTTGTCAAAATAAAAACCAAATAA ATATATATAAAATTCACCTGCAAAACGAAGCAACAAAAGACACTGTACGG CTCAAATGGACGAAGAGGAGAACTCAGAAATCAATTCTGTGCAAGCACGG GATGAAGATGTGCAATTGGAGGACCAACAGTCACAGGGGCTCCAGGATCG GCAGGTAGACGTGATAGAACAGGCTTGGAACAATGCAATGCCAGACGAGC CGTCACCGCCGGCAGAAGATGCCTTCCAAGATCCACTGGCCACCGATGGT GAGGGAGGGGATGCACTTGAGGCCATGGTAGAGAACGTTTTGCAGGACGA CACAGCAAGCGAGGGCAGTCATCCCAGCAGTGACATGTCTCTGGAAAGTC CAGGAAGTGAAGATGATTCCGATCTGGAGAGCCTGCCCCATTGGATGATT CCGCAGAACCGACTGCGCTCCGCCGTAGACATGATGGTCTCGCAAGCCCG CAATCGGGATGGTGGAATCGCTGCACTGCTCAGTGGGGACAACTTCCTAC AGCGAGTGCGTAGCATGGTCTTTAGCCAGGAGCGACGGCGCAGTCGCACA AGCGAGGAAACGAGCCAGGAGGCTGCCGAGCAGCCCGTTGATCCACCGCC ACAGCAGCCACCTCGACCACCAATCGACATTGGCTTTGACACCAATCTGC CAGCGGAGCATTCATACTTCGGTAATCATTTGAGTCGCGTGCCCGGAGTG GACTACTTGGAGGTGGGCAGCGTCCATCACATGCTCATCTTCTTGCACCA GCACATCCTCTTTCCCGGCGAGGTGCTTCCCTTCATGATCGACGGCCGAA TGTTTGACGAGGATATGCCCGGTCTGGACGGTCTGATCTTCGGTGTAAGC TTCCCGCGTTTGCAGCCGCCGGAGGACAACCCACACAAGTTGTATGGGGT CACGTGTCAGATCTACGAAAGGGGCGAAAGCGGCCGAGGATTGGTGTTCT ACAAATCACGAGCACTGCAGCGCATTGTCATCAACTGCGATGATATAAAA GGGTCACCGCAGTACATTGCTCGCAATCCAACTAGCAAATGCTTCAGCAA AGTCAAAATATTGCCCGAGTATTTCCTGCCCGAACCGCTCCAAACTGTTG ACATGGGCTCGATGGCCAGATTTCGGGATATACCCTCGATGCGCGACAAG TATCGCAGGTTCCAGCTAAGCACTACCACCTGGCCATCTGATGCCTGCCA AGAGTATTCGTTTTCTTCAATTGTGGAGCGAGCACGCCAGAGGCTGGAGT CCCAAAAGATAGACACAATGCCAAAATGCCCCATTCAGTTGTCCTTCTGG TTGGTGCGTAACCTTCACCTGACCGAGAAGATGATGCGGCTTACCTTCCT CACCGACTCGGTTAACACTCGCCTCCAATTGATCAAAAGCACGTTCAAGG ACGAGACACTCTTCTTTTGCCGATATTGCAATAGCAGCTTGGCCCTCTGC TCGGATCTCTTTGCCATGTCCAAACACGGTGTGCAGACACAGTATTGCAA TCCAGAGGGCTACATCCACGAGACAAACACCGTGTACCGGGTGATATCCC ATGCCATCGGCTACAGCGGCGAGCCGTCCACAAAGTTTAGCTGGTTCCCC GGCTATCAGTGGCACATTATTCTGTGCAAGTTCTGCGCCCAGCACGTCGG GTGGGAGTTCAAGGCCGTGCATCCCAACCTAACACCCAAGGTGTTTTTCG GTTTGGCCGGCTCCAGCGTGCGGATTGGAAAAGCCAGCGAGTACTCGCCC TTCAATGGAACCACCTATGTGGTGCGGAATATGATGCGGATGATCTCAAG CGATATGGAATGAGGCTGGCGCGTTGTGAAGCGATTTTTCAGATGTCAAC TCTGCTGCTGGCGTCGTCAGGAGAATGATGCGGTCCATCAGGTGGGACCT GTTTAATTCGTTTCACAACTACTTTTAGCAAAAACACACGGCGTTTGATG GCGTGGATGTAAACCTAATTGATATTTACGATTATTTGAATAATAAGTTA CTCTTAAATATTTGCTTTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 5875507..5876150 | 411..1054 | 3220 | 100 | Plus |
chr3R | 27901430 | chr3R | 5876780..5877296 | 1553..2069 | 2585 | 100 | Plus |
chr3R | 27901430 | chr3R | 5876208..5876711 | 1052..1555 | 2520 | 100 | Plus |
chr3R | 27901430 | chr3R | 5875156..5875443 | 125..412 | 1425 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 5874960..5875086 | 1..127 | 635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 10049738..10050381 | 411..1054 | 3220 | 100 | Plus |
3R | 32079331 | 3R | 10051011..10051529 | 1553..2071 | 2595 | 100 | Plus |
3R | 32079331 | 3R | 10050439..10050942 | 1052..1555 | 2520 | 100 | Plus |
3R | 32079331 | 3R | 10049387..10049674 | 125..412 | 1440 | 100 | Plus |
3R | 32079331 | 3R | 10049191..10049317 | 1..127 | 635 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 9790569..9791212 | 411..1054 | 3220 | 100 | Plus |
3R | 31820162 | 3R | 9791842..9792360 | 1553..2071 | 2595 | 100 | Plus |
3R | 31820162 | 3R | 9791270..9791773 | 1052..1555 | 2520 | 100 | Plus |
3R | 31820162 | 3R | 9790218..9790505 | 125..412 | 1440 | 100 | Plus |
3R | 31820162 | 3R | 9790022..9790148 | 1..127 | 635 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 5874960..5875086 | 1..127 | 100 | -> | Plus |
chr3R | 5875159..5875443 | 128..412 | 99 | -> | Plus |
chr3R | 5875509..5876148 | 413..1052 | 100 | -> | Plus |
chr3R | 5876209..5876711 | 1053..1555 | 100 | -> | Plus |
chr3R | 5876783..5877296 | 1556..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 1..1758 | 106..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 1..1758 | 106..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 1..1758 | 106..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 1..1758 | 106..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 1..1758 | 106..1863 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 26..2094 | 1..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 25..2093 | 1..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 1..2061 | 9..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 26..2094 | 1..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3925-RA | 1..2061 | 9..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10049191..10049317 | 1..127 | 100 | -> | Plus |
3R | 10049390..10049674 | 128..412 | 100 | -> | Plus |
3R | 10049740..10050379 | 413..1052 | 100 | -> | Plus |
3R | 10050440..10050942 | 1053..1555 | 100 | -> | Plus |
3R | 10051014..10051527 | 1556..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10049191..10049317 | 1..127 | 100 | -> | Plus |
3R | 10049390..10049674 | 128..412 | 100 | -> | Plus |
3R | 10049740..10050379 | 413..1052 | 100 | -> | Plus |
3R | 10050440..10050942 | 1053..1555 | 100 | -> | Plus |
3R | 10051014..10051527 | 1556..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 10049191..10049317 | 1..127 | 100 | -> | Plus |
3R | 10049390..10049674 | 128..412 | 100 | -> | Plus |
3R | 10049740..10050379 | 413..1052 | 100 | -> | Plus |
3R | 10050440..10050942 | 1053..1555 | 100 | -> | Plus |
3R | 10051014..10051527 | 1556..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 5874913..5875039 | 1..127 | 100 | -> | Plus |
arm_3R | 5875112..5875396 | 128..412 | 100 | -> | Plus |
arm_3R | 5875462..5876101 | 413..1052 | 100 | -> | Plus |
arm_3R | 5876162..5876664 | 1053..1555 | 100 | -> | Plus |
arm_3R | 5876736..5877249 | 1556..2069 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 9790221..9790505 | 128..412 | 100 | -> | Plus |
3R | 9790571..9791210 | 413..1052 | 100 | -> | Plus |
3R | 9791271..9791773 | 1053..1555 | 100 | -> | Plus |
3R | 9791845..9792358 | 1556..2069 | 100 | Plus | |
3R | 9790022..9790148 | 1..127 | 100 | -> | Plus |
Translation from 105 to 1862
> LD28592.pep MDEEENSEINSVQARDEDVQLEDQQSQGLQDRQVDVIEQAWNNAMPDEPS PPAEDAFQDPLATDGEGGDALEAMVENVLQDDTASEGSHPSSDMSLESPG SEDDSDLESLPHWMIPQNRLRSAVDMMVSQARNRDGGIAALLSGDNFLQR VRSMVFSQERRRSRTSEETSQEAAEQPVDPPPQQPPRPPIDIGFDTNLPA EHSYFGNHLSRVPGVDYLEVGSVHHMLIFLHQHILFPGEVLPFMIDGRMF DEDMPGLDGLIFGVSFPRLQPPEDNPHKLYGVTCQIYERGESGRGLVFYK SRALQRIVINCDDIKGSPQYIARNPTSKCFSKVKILPEYFLPEPLQTVDM GSMARFRDIPSMRDKYRRFQLSTTTWPSDACQEYSFSSIVERARQRLESQ KIDTMPKCPIQLSFWLVRNLHLTEKMMRLTFLTDSVNTRLQLIKSTFKDE TLFFCRYCNSSLALCSDLFAMSKHGVQTQYCNPEGYIHETNTVYRVISHA IGYSGEPSTKFSWFPGYQWHIILCKFCAQHVGWEFKAVHPNLTPKVFFGL AGSSVRIGKASEYSPFNGTTYVVRNMMRMISSDME*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17853-PA | 520 | GF17853-PA | 19..520 | 75..585 | 2266 | 81.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17313-PA | 586 | GG17313-PA | 1..586 | 1..585 | 2783 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22576-PA | 671 | GH22576-PA | 116..671 | 38..585 | 2098 | 69.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ohgt-PA | 585 | CG3925-PA | 1..585 | 1..585 | 3110 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23135-PA | 676 | GI23135-PA | 155..676 | 73..585 | 2131 | 73.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL27201-PA | 616 | GL27201-PA | 1..616 | 1..585 | 2134 | 67.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17779-PA | 616 | GA17779-PA | 1..616 | 1..585 | 2131 | 67.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23853-PA | 587 | GM23853-PA | 1..587 | 1..585 | 2932 | 95.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18661-PA | 587 | GD18661-PA | 1..587 | 1..585 | 2922 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10436-PA | 640 | GJ10436-PA | 137..640 | 89..585 | 2127 | 75.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12054-PA | 612 | GK12054-PA | 34..612 | 1..585 | 2074 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26004-PA | 588 | GE26004-PA | 1..588 | 1..585 | 2822 | 91.7 | Plus |
Translation from 105 to 1862
> LD28592.hyp MDEEENSEINSVQARDEDVQLEDQQSQGLQDRQVDVIEQAWNNAMPDEPS PPAEDAFQDPLATDGEGGDALEAMVENVLQDDTASEGSHPSSDMSLESPG SEDDSDLESLPHWMIPQNRLRSAVDMMVSQARNRDGGIAALLSGDNFLQR VRSMVFSQERRRSRTSEETSQEAAEQPVDPPPQQPPRPPIDIGFDTNLPA EHSYFGNHLSRVPGVDYLEVGSVHHMLIFLHQHILFPGEVLPFMIDGRMF DEDMPGLDGLIFGVSFPRLQPPEDNPHKLYGVTCQIYERGESGRGLVFYK SRALQRIVINCDDIKGSPQYIARNPTSKCFSKVKILPEYFLPEPLQTVDM GSMARFRDIPSMRDKYRRFQLSTTTWPSDACQEYSFSSIVERARQRLESQ KIDTMPKCPIQLSFWLVRNLHLTEKMMRLTFLTDSVNTRLQLIKSTFKDE TLFFCRYCNSSLALCSDLFAMSKHGVQTQYCNPEGYIHETNTVYRVISHA IGYSGEPSTKFSWFPGYQWHIILCKFCAQHVGWEFKAVHPNLTPKVFFGL AGSSVRIGKASEYSPFNGTTYVVRNMMRMISSDME*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3925-PA | 585 | CG3925-PA | 1..585 | 1..585 | 3110 | 100 | Plus |