BDGP Sequence Production Resources |
Search the DGRC for LD28626
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 286 |
Well: | 26 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1218-RA |
Protein status: | LD28626.pep: gold |
Preliminary Size: | 1696 |
Sequenced Size: | 1492 |
Gene | Date | Evidence |
---|---|---|
CG1218 | 2001-01-01 | Release 2 assignment |
CG1218 | 2001-11-29 | Blastp of sequenced clone |
CG1218 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1218 | 2008-04-29 | Release 5.5 accounting |
CG1218 | 2008-08-15 | Release 5.9 accounting |
CG1218 | 2008-12-18 | 5.12 accounting |
1492 bp (1492 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069557
> LD28626.complete CAAACCTCACATTTTGCAAATTTGTTTGAAATCGGTATTGTTGTTACTTA AGAATGCCAAAAGAAGATTGCAAATACTGGGATAAGTGCTATCAGCAGAA TCCCGCACATTTGTCCAAATACAATCATCCGAAAAAGCAACAAGAACACG AAGTGGACGGCGCAGAAGGCAAAAAAGTGGCGCCAAAAAGAAGTGCATCC TCGCAGTCTGGTGAACAGAAAAAGGAAGAACAAACGGAGCCGGTGAACAA GGATAAGTCCAATACGAGTGCTTCAAGTACGGAGATGGTGAACAAGGATA CAGCCAAGGGCAGTTATGAAGCCGAAACCGAGGAGCTTCACAAAGAGGCC ATGAGCAACATATCCGGAAAGAACTACATGGAGATCTTGGAGAAGCGCAT CCGCCTGTCCGTGCAGAAGGAGTACGACAATCTCTGCGAGTCCAACGAGT TCATTCGACACAAGTTCCTTGTCGAAATGCCGCCGGACTTCTACGAATTT TGGAAGTTTGTGGGAAGCTTAAAAATTGATCCTGCGAAGCCCAAGGATGC TGGCTTGGAGCACCTAGACAAAGTATTTCAACTGCAGTTGGTGGGTCCCT TTGAGTTCCTAGCCGGTAAATTTCACGGCGCCAAACTAGGCGAACCGGGA GACTACCTGCGCCACTGGCGTTTTTACTACGATCCACCAGAATTTCAGAC GATCTTCGTGCGCCGAGGCACTGGGATTCACTACGGTTACTGGCGCGATG TGCCGCAGGACAAGGAAAATCTCTTAATAGCCCGCAACGACTCTGCGAAA GGCTGCCAGTTCCAATTCGTCGCTGGAAATGCCTTCGATGCTTTCCTCTA CTACCTGGAGCACGATTTTGCGGCCACTCCGTTCTCATGCGGGCAGTTGG CGGGGACCAAAAAGGCGGTGGCAAAATACCTGAGTGACAATTCCCTAGAA CTGGCCCAGCTGGACCGACTGCAGCGGGAGCGCAACAAGCGTGTTGTGGC CAAGACATTCCACCGAGCCGGCATTGTTGTGCCCTTTGACCAGAAGACAG AAGTGGGATACCGCCCGCTGGCTGTCAGCGATTCCGAACTCAAGAAGATG CTGGCAATGCTTGAGCGGAAGGACGTCGATAATGGAGCCGCCAAGCAGGC GGTTCTGGAGAAGCTGCAGCCGGTGGCCAACGCAGCCAACATAGCAGTTG ATGAATCGGACTTTGGAAGCGCCCTGGAACTAGGCATCGATATGTTCTGC AGTGGGCACAAGGAGCTGCACATGCTTGCCTCATCGTTGCTGGTACCCGC CTATTCAATGCTTTCCCGTCCACAGTTCATAGCCATCGCCAAGGCGCACA TGGAGCAACGTAGTCGGGAGGACAACCTCAGCATTTTTGATGTACTTAAG TAGTTCGATTTTTATTCCGCAACCGTATCATTTTTACAAGCATTAAAACT AGGAAGTTGAGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1617567..1619030 | 1..1464 | 7320 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5791920..5793384 | 1..1465 | 7325 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5532751..5534215 | 1..1465 | 7325 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1617567..1619030 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 1..1350 | 54..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 1..1350 | 54..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 1..1350 | 54..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 1..1350 | 54..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 1..1350 | 54..1403 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 35..1498 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 35..1498 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 42..1505 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 35..1498 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1218-RA | 42..1505 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5791920..5793383 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5791920..5793383 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5791920..5793383 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1617642..1619105 | 1..1464 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5532751..5534214 | 1..1464 | 100 | Plus |
Translation from 53 to 1402
> LD28626.pep MPKEDCKYWDKCYQQNPAHLSKYNHPKKQQEHEVDGAEGKKVAPKRSASS QSGEQKKEEQTEPVNKDKSNTSASSTEMVNKDTAKGSYEAETEELHKEAM SNISGKNYMEILEKRIRLSVQKEYDNLCESNEFIRHKFLVEMPPDFYEFW KFVGSLKIDPAKPKDAGLEHLDKVFQLQLVGPFEFLAGKFHGAKLGEPGD YLRHWRFYYDPPEFQTIFVRRGTGIHYGYWRDVPQDKENLLIARNDSAKG CQFQFVAGNAFDAFLYYLEHDFAATPFSCGQLAGTKKAVAKYLSDNSLEL AQLDRLQRERNKRVVAKTFHRAGIVVPFDQKTEVGYRPLAVSDSELKKML AMLERKDVDNGAAKQAVLEKLQPVANAANIAVDESDFGSALELGIDMFCS GHKELHMLASSLLVPAYSMLSRPQFIAIAKAHMEQRSREDNLSIFDVLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16353-PA | 373 | GF16353-PA | 9..373 | 85..449 | 1692 | 83.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13048-PA | 446 | GG13048-PA | 1..446 | 1..449 | 2205 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18157-PA | 432 | GH18157-PA | 1..432 | 1..449 | 1694 | 69.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1218-PA | 449 | CG1218-PA | 1..449 | 1..449 | 2356 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10110-PA | 426 | GI10110-PA | 1..426 | 1..449 | 1707 | 70.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24525-PA | 442 | GL24525-PA | 1..442 | 1..449 | 1813 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11459-PA | 442 | GA11459-PA | 1..442 | 1..449 | 1821 | 75.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10841-PA | 449 | GM10841-PA | 1..449 | 1..449 | 2313 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19822-PA | 449 | GD19822-PA | 1..449 | 1..449 | 2342 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23331-PA | 432 | GJ23331-PA | 1..432 | 1..449 | 1702 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13433-PA | 452 | GK13433-PA | 1..451 | 1..448 | 1696 | 68.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10166-PA | 447 | GE10166-PA | 1..447 | 1..449 | 2122 | 88.2 | Plus |
Translation from 53 to 1402
> LD28626.hyp MPKEDCKYWDKCYQQNPAHLSKYNHPKKQQEHEVDGAEGKKVAPKRSASS QSGEQKKEEQTEPVNKDKSNTSASSTEMVNKDTAKGSYEAETEELHKEAM SNISGKNYMEILEKRIRLSVQKEYDNLCESNEFIRHKFLVEMPPDFYEFW KFVGSLKIDPAKPKDAGLEHLDKVFQLQLVGPFEFLAGKFHGAKLGEPGD YLRHWRFYYDPPEFQTIFVRRGTGIHYGYWRDVPQDKENLLIARNDSAKG CQFQFVAGNAFDAFLYYLEHDFAATPFSCGQLAGTKKAVAKYLSDNSLEL AQLDRLQRERNKRVVAKTFHRAGIVVPFDQKTEVGYRPLAVSDSELKKML AMLERKDVDNGAAKQAVLEKLQPVANAANIAVDESDFGSALELGIDMFCS GHKELHMLASSLLVPAYSMLSRPQFIAIAKAHMEQRSREDNLSIFDVLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1218-PA | 449 | CG1218-PA | 1..449 | 1..449 | 2356 | 100 | Plus |