Clone LD28673 Report

Search the DGRC for LD28673

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:286
Well:73
Vector:pOT2
Associated Gene/TranscriptEloA-RB
Protein status:LD28673.pep: gold
Preliminary Size:2926
Sequenced Size:2692

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6755 2001-01-01 Release 2 assignment
CG6755 2001-10-10 Blastp of sequenced clone
CG6755 2003-01-01 Sim4 clustering to Release 3
EloA 2008-04-29 Release 5.5 accounting
EloA 2008-08-15 Release 5.9 accounting
EloA 2008-12-18 5.12 accounting

Clone Sequence Records

LD28673.complete Sequence

2692 bp (2692 high quality bases) assembled on 2001-10-10

GenBank Submission: AY061363

> LD28673.complete
TTTCCAACGCTGCTGGCCTGGCAAAAGCAAAAATCGAATGTATTATAATA
AAGGCCCGTAATGCTATTGAAAATAACTTAGAGCCTCGCGACCAGAGGCT
TTTCCGCGTGTGTGTGTGCACTTGTGCGTGTGCGTGTGTTTGCCCTTGGG
TGCGTGTGTGTTTACCTGGATTCCCTAAAAAAAAATCAGTAAACTGAAAC
TGCTGCACTGCATCACCAAGCTGTTCAACCTGCCGATCAAATTCGAGCAC
CTGCAGGAAACGGGAATTGGCAAGACGGTGAATGCCCTGCGCAAGATCAG
CGGGGAAGTTGGCGTGGCGGCCAAGACGCTGGTAACCAAGTGGAAGGCAA
TGGTGGCGAAGGAGGACCCTTCGATCGCATCTACGCCTACAGCCATACAT
AACGAAGAGGACTCGGGCAAGACCAAGTCCAGCGACGAGGATCCCGACCA
GGAGAACAAGGGCGGCAACTCATCCAGCGGCGAGGACTTGAACACCAGCA
AGCACAAGTCAAAGCATGCCAAGAGCACCAAGCATGAGCGTAGCAGCAGC
AGCCGATCTCACTCCAAGAGTAGGTCTGACTCGGATAAGAAGCACAAGAG
CTCTCGCCACGATAAATCCAAGGATAGAGATAAAGATCGGGAGGGTCAGA
AGGAAGCTAAGGAGCACAAAGAAAAGAAGTCAAATGGCGAGCACAAGTCA
AAGGATTCCAGCAAATCCAGCAGCAGTCACAAGAGCAGCAAATCCGAGAG
CCACAAGAGCGAACACACCAAAAGCAAGCACGAAAAGGACAAAACTTCTC
ACAGTGAATTAAAGGAAGTCAAAGACAAGTCGAGCAAACACAAATCATCG
TCCTCCAAGTCATCAAAGCGCTCCCATAGTCCCCCACGCCACGAGGAGGA
GTCCCAAAAAGCAAAGATACCAAAAGTTAAATCGAAATCTGAGGAAGATT
CCGCTGATGGTTTTGACTCCAGCATGGGCGCAAATTTTGACGATGTTCTT
GGTCTGCTAAACATACCCATAAGTAGCAAGAAGAGCAGCAGCAACAGCAA
GAGCAAGTTTGTCGCCAAGCCAACTGCAGCCCCTTCCTCGTCAGCTCTAT
CAGCACCTACGACTGCTGGGTCATCTAAAGAGGCACTCTCAACTAGCAGT
CGACCGACCTCCAAAAAACCCGAACTGTTGGCATCCACAGCTAAGCTGGA
GCCCTTGGATCCAAACATTGCACTAGAACTTCCCACCATATCCAATAACT
ACAAGCCCATGCCATTAAATCAGACAGTTATGGACGTCGTCTTTAACCAG
GGTGGCTCACACAAGGCGCAAGCATCACGATACTTTAATGAGTCAGAAGC
TCTAGCGCAGGGCATCTCTTCCAAAACTATGCGCACCAAGATCTATTCGG
GTGTGAGAACTGGTCAAATCCTGCAGGTCCCTTCCCTTTTTGATCTCTGC
ACCCGCGTGCTGCAAAAGAATATTGATGCATTGGAGTATACGGGTGGCGT
TCCGTTTGAGGTCCTACGTCCCGTTTTGGAGCGAGCTACCCCCCAGCAGC
TGCTTAACTTTGAGGAGTACAATCCTTATTTAATGGATGACAGTGATGTC
CTATGGCAACAGCATGTCCAACGTCACTGTCGCAGTCAGCGGCGTGAAGA
GATGGAAACGTGGCGCGAAATGTTTTTGCGCTGCCAAGAGGAAAAGGATC
GCAAACTTAGCATTCTGGCCGAGAGCATCAAGGCATCGCAAAAGATAAGC
GAGGCGCCTGTGCGCAAGACGCAATTGGCCTTTGTGGACTCAATGGTGAA
GCCGCCGCGTAGTGTGCAGCGCAAGCAAGAGCAATATGGCACCAAGGGCA
AGCTAATTGCCACTCCAGCCGCCCGAGTGGCCGCCTTGTCCAGCGTGACT
CCAAATGCAGCCAAGGTGGGCGATGCCCGACTACGTGTGCTGGCCGCTGC
CAGGGACACGGCCCAAGTGGGGGCTGGACCAGCGCGATCGAAGAAGGCAC
CTCTAATGGCGAAGACCTTGCAGTTTATGCGCGGACGTCTCAAACGATAG
ATGCGCTTACTCATTATAGCTACAATCTTATACTCAACTTCTTCAGCGAC
AACTTAAGCAGCAGCAGTAGCAGCAACCTCGATCTATTAGGCATTCACGG
TGGGATTACCTTCCAACTTTATTGGCAAAGACTTTCAGGTCTGAATAAAG
TGACATTGTGATACTAGACCTTCTACTTCCCAGTGCGCTGTGGAATCAGA
CTGCTGCTGTCGGCATGCGTAGCATATGCATGCTATTTATTATTTATTCA
TGTTCTGCCCTCTTTTATTACGCTGTATAAGTCACTATATTTAAGCCAAC
CGGATAAAGATAAAGCTTTTGTTGCATCCCGCTGGGTCGTAGACAAGCTC
ATTTACATAAGTTATGATATTTGATTATAGTTGTTCAATTCATTGATTGC
ATGTAACTTACGATCAGAAGGCTGATCACTCCAACATTATTTAAAAATTA
AGTTCAATGTTCTTTGTTCAAAAGGGCTGTGCGTATGTCCAAAATCATAG
AGGTTCCAAGCTGTATATAAATGTATTTACACAATCCTAAACCTATATGA
AACTACCTAAATTATTGAAGAACAGTAAAATGTCTCTTAATGCATCGCTA
ATTAAATTCAACCAAAAAATTCTAAAAAAAAAAAAAAAAAAA

LD28673.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:13:56
Subject Length Description Subject Range Query Range Score Percent Strand
EloA-RB 2716 EloA-RB 44..2716 1..2673 13365 100 Plus
EloA-RA 3012 EloA-RA 480..2954 200..2674 12375 100 Plus
EloA.a 3022 EloA.a 433..1711 200..1478 6395 100 Plus
EloA.a 3022 EloA.a 1768..2964 1478..2674 5985 100 Plus
EloA.a 3022 EloA.a 62..260 1..199 995 100 Plus
EloA-RA 3012 EloA-RA 109..307 1..199 995 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:24:28
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 19077780..19078483 1970..2673 3520 100 Plus
chr3R 27901430 chr3R 19075661..19076249 200..788 2945 100 Plus
chr3R 27901430 chr3R 19076302..19076681 786..1165 1900 100 Plus
chr3R 27901430 chr3R 19077429..19077722 1678..1971 1470 100 Plus
chr3R 27901430 chr3R 19076737..19076954 1166..1383 1090 100 Plus
chr3R 27901430 chr3R 19077164..19077364 1478..1678 1005 100 Plus
chr3R 27901430 chr3R 19074999..19075197 1..199 995 100 Plus
chr3R 27901430 chr3R 19077012..19077107 1383..1478 480 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:21:20 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:24:25
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23254368..23255072 1970..2674 3525 100 Plus
3R 32079331 3R 23252249..23252837 200..788 2945 100 Plus
3R 32079331 3R 23252890..23253269 786..1165 1900 100 Plus
3R 32079331 3R 23254017..23254310 1678..1971 1470 100 Plus
3R 32079331 3R 23253325..23253542 1166..1383 1090 100 Plus
3R 32079331 3R 23253752..23253952 1478..1678 1005 100 Plus
3R 32079331 3R 23251587..23251785 1..199 995 100 Plus
3R 32079331 3R 23253600..23253695 1383..1478 480 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:37:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22995199..22995903 1970..2674 3525 100 Plus
3R 31820162 3R 22993080..22993668 200..788 2945 100 Plus
3R 31820162 3R 22993721..22994100 786..1165 1900 100 Plus
3R 31820162 3R 22994848..22995141 1678..1971 1470 100 Plus
3R 31820162 3R 22994156..22994373 1166..1383 1090 100 Plus
3R 31820162 3R 22994583..22994783 1478..1678 1005 100 Plus
3R 31820162 3R 22992418..22992616 1..199 995 100 Plus
3R 31820162 3R 22994431..22994526 1383..1478 480 100 Plus
Blast to na_te.dros performed 2019-03-16 02:24:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2386..2544 1010..1170 169 58.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6707..6850 1006..1149 161 60.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2355..2448 1018..1113 160 64.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6807..6970 1010..1167 158 59.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2290..2554 1001..1268 152 54.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6866 1010..1150 141 58.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2790..2911 1018..1135 139 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6774..6904 1010..1145 137 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6786..6878 1010..1107 136 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2576..2712 1020..1154 130 56.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2910..2989 709..794 128 65.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2334..2367 2094..2127 125 85.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6753..6798 1010..1055 122 73.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2368..2492 1025..1145 120 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6825..6948 1010..1129 116 56.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2610..2652 2085..2127 116 74.4 Plus

LD28673.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:25:24 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 19077165..19077364 1479..1678 100 -> Plus
chr3R 19074999..19075103 1..105 100 == Plus
chr3R 19075160..19075197 162..199 100 -> Plus
chr3R 19075661..19076248 200..787 100 -> Plus
chr3R 19076304..19076681 788..1165 100 -> Plus
chr3R 19076737..19076954 1166..1383 100 -> Plus
chr3R 19077013..19077107 1384..1478 100 -> Plus
chr3R 19077430..19077721 1679..1970 100 -> Plus
chr3R 19077781..19078483 1971..2673 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:08:29 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RA 77..1932 192..2050 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:54:32 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RA 77..1932 192..2050 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:36:12 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RA 77..1932 192..2050 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:23:37 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RA 77..1932 192..2050 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:09:14 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RA 77..1932 192..2050 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:40:01 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RB 44..2716 1..2673 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:54:32 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RB 44..2716 1..2673 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:36:12 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RB 25..2697 1..2673 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:23:37 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RB 44..2716 1..2673 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:09:14 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
EloA-RB 25..2697 1..2673 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:24 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23254018..23254309 1679..1970 100 -> Plus
3R 23251587..23251785 1..199 100 -> Plus
3R 23252249..23252836 200..787 100 -> Plus
3R 23252892..23253269 788..1165 100 -> Plus
3R 23253325..23253542 1166..1383 100 -> Plus
3R 23253601..23253695 1384..1478 100 -> Plus
3R 23253753..23253952 1479..1678 100 -> Plus
3R 23254369..23255071 1971..2673 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:24 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23254018..23254309 1679..1970 100 -> Plus
3R 23251587..23251785 1..199 100 -> Plus
3R 23252249..23252836 200..787 100 -> Plus
3R 23252892..23253269 788..1165 100 -> Plus
3R 23253325..23253542 1166..1383 100 -> Plus
3R 23253601..23253695 1384..1478 100 -> Plus
3R 23253753..23253952 1479..1678 100 -> Plus
3R 23254369..23255071 1971..2673 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:24 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23254018..23254309 1679..1970 100 -> Plus
3R 23251587..23251785 1..199 100 -> Plus
3R 23252249..23252836 200..787 100 -> Plus
3R 23252892..23253269 788..1165 100 -> Plus
3R 23253325..23253542 1166..1383 100 -> Plus
3R 23253601..23253695 1384..1478 100 -> Plus
3R 23253753..23253952 1479..1678 100 -> Plus
3R 23254369..23255071 1971..2673 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:36:12 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19077309..19077507 1..199 100 -> Plus
arm_3R 19077971..19078558 200..787 100 -> Plus
arm_3R 19078614..19078991 788..1165 100 -> Plus
arm_3R 19079047..19079264 1166..1383 100 -> Plus
arm_3R 19079323..19079417 1384..1478 100 -> Plus
arm_3R 19079475..19079674 1479..1678 100 -> Plus
arm_3R 19079740..19080031 1679..1970 100 -> Plus
arm_3R 19080091..19080793 1971..2673 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:00:43 Download gff for LD28673.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22993080..22993667 200..787 100 -> Plus
3R 22993723..22994100 788..1165 100 -> Plus
3R 22994156..22994373 1166..1383 100 -> Plus
3R 22994432..22994526 1384..1478 100 -> Plus
3R 22994584..22994783 1479..1678 100 -> Plus
3R 22994849..22995140 1679..1970 100 -> Plus
3R 22995200..22995902 1971..2673 100   Plus
3R 22992418..22992616 1..199 100 -> Plus

LD28673.pep Sequence

Translation from 349 to 2049

> LD28673.pep
MVAKEDPSIASTPTAIHNEEDSGKTKSSDEDPDQENKGGNSSSGEDLNTS
KHKSKHAKSTKHERSSSSRSHSKSRSDSDKKHKSSRHDKSKDRDKDREGQ
KEAKEHKEKKSNGEHKSKDSSKSSSSHKSSKSESHKSEHTKSKHEKDKTS
HSELKEVKDKSSKHKSSSSKSSKRSHSPPRHEEESQKAKIPKVKSKSEED
SADGFDSSMGANFDDVLGLLNIPISSKKSSSNSKSKFVAKPTAAPSSSAL
SAPTTAGSSKEALSTSSRPTSKKPELLASTAKLEPLDPNIALELPTISNN
YKPMPLNQTVMDVVFNQGGSHKAQASRYFNESEALAQGISSKTMRTKIYS
GVRTGQILQVPSLFDLCTRVLQKNIDALEYTGGVPFEVLRPVLERATPQQ
LLNFEEYNPYLMDDSDVLWQQHVQRHCRSQRREEMETWREMFLRCQEEKD
RKLSILAESIKASQKISEAPVRKTQLAFVDSMVKPPRSVQRKQEQYGTKG
KLIATPAARVAALSSVTPNAAKVGDARLRVLAAARDTAQVGAGPARSKKA
PLMAKTLQFMRGRLKR*

LD28673.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 09:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16986-PA 648 GF16986-PA 79..648 1..566 1781 71.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 09:51:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11195-PA 644 GG11195-PA 78..644 1..566 2381 93.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 09:51:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18516-PA 692 GH18516-PA 78..692 1..566 1726 62.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
EloA-PB 566 CG6755-PB 1..566 1..566 2856 100 Plus
EloA-PA 643 CG6755-PA 78..643 1..566 2856 100 Plus
PNUTS-PA 628 CG33526-PA 225..461 18..269 239 31 Plus
PNUTS-PB 628 CG33526-PB 225..461 18..269 239 31 Plus
PNUTS-PE 1135 CG33526-PE 225..461 18..269 239 31 Plus
PNUTS-PD 1135 CG33526-PD 225..461 18..269 239 31 Plus
Top1-PD 970 CG6146-PD 38..200 36..191 224 34.7 Plus
Top1-PC 974 CG6146-PC 42..204 36..191 224 34.7 Plus
Top1-PA 974 CG6146-PA 42..204 36..191 224 34.7 Plus
PNUTS-PA 628 CG33526-PA 282..518 17..281 223 30.9 Plus
PNUTS-PB 628 CG33526-PB 282..518 17..281 223 30.9 Plus
PNUTS-PE 1135 CG33526-PE 282..518 17..281 223 30.9 Plus
PNUTS-PD 1135 CG33526-PD 282..518 17..281 223 30.9 Plus
CG12877-PC 991 CG12877-PC 153..350 14..203 208 29.5 Plus
CG12877-PC 991 CG12877-PC 141..337 24..220 205 28.4 Plus
BOD1-PC 1109 CG5514-PC 540..734 14..212 203 29.6 Plus
BOD1-PA 1109 CG5514-PA 540..734 14..212 203 29.6 Plus
BOD1-PD 1150 CG5514-PD 540..734 14..212 203 29.6 Plus
BOD1-PB 1150 CG5514-PB 540..734 14..212 203 29.6 Plus
BOD1-PE 1151 CG5514-PE 540..734 14..212 203 29.6 Plus
Top1-PD 970 CG6146-PD 37..257 10..237 201 23.7 Plus
Top1-PC 974 CG6146-PC 41..261 10..237 201 23.7 Plus
Top1-PA 974 CG6146-PA 41..261 10..237 201 23.7 Plus
CG34398-PI 1702 CG34398-PI 1319..1600 13..279 199 26.5 Plus
CG34398-PL 1757 CG34398-PL 1374..1655 13..279 199 26.5 Plus
CG34398-PH 1930 CG34398-PH 1547..1828 13..279 199 26.5 Plus
CG34398-PA 1930 CG34398-PA 1547..1828 13..279 199 26.5 Plus
BOD1-PC 1109 CG5514-PC 607..942 18..333 198 22.1 Plus
BOD1-PA 1109 CG5514-PA 607..942 18..333 198 22.1 Plus
BOD1-PD 1150 CG5514-PD 607..942 18..333 198 22.1 Plus
BOD1-PB 1150 CG5514-PB 607..942 18..333 198 22.1 Plus
BOD1-PE 1151 CG5514-PE 607..942 18..333 198 22.1 Plus
BOD1-PC 1109 CG5514-PC 571..782 22..215 195 27.8 Plus
BOD1-PA 1109 CG5514-PA 571..782 22..215 195 27.8 Plus
BOD1-PD 1150 CG5514-PD 571..782 22..215 195 27.8 Plus
BOD1-PB 1150 CG5514-PB 571..782 22..215 195 27.8 Plus
BOD1-PE 1151 CG5514-PE 571..782 22..215 195 27.8 Plus
Top1-PD 970 CG6146-PD 35..197 71..268 194 32.2 Plus
Top1-PC 974 CG6146-PC 39..201 71..268 194 32.2 Plus
Top1-PA 974 CG6146-PA 39..201 71..268 194 32.2 Plus
CG34398-PG 1611 CG34398-PG 1374..1554 13..189 191 29.4 Plus
CG34398-PF 1784 CG34398-PF 1547..1727 13..189 191 29.4 Plus
CG34398-PE 1784 CG34398-PE 1547..1727 13..189 191 29.4 Plus
CG34398-PC 1784 CG34398-PC 1547..1727 13..189 191 29.4 Plus
CG7971-PG 1062 CG7971-PG 486..772 18..291 188 20.8 Plus
CG7971-PA 1062 CG7971-PA 486..772 18..291 188 20.8 Plus
CG7971-PC 1107 CG7971-PC 486..772 18..291 188 20.8 Plus
CG10600-PB 1406 CG10600-PB 159..329 11..191 188 29 Plus
CG7971-PF 1655 CG7971-PF 711..997 18..291 188 20.8 Plus
CG10600-PB 1406 CG10600-PB 144..332 7..203 184 28.3 Plus
ear-PC 931 CG4913-PC 451..710 11..275 181 24.6 Plus
ear-PA 931 CG4913-PA 451..710 11..275 181 24.6 Plus
ear-PB 945 CG4913-PB 451..710 11..275 181 24.6 Plus
CG10600-PA 1377 CG10600-PA 162..300 49..191 179 31.2 Plus
CG3918-PA 321 CG3918-PA 68..319 19..267 178 27.8 Plus
dre4-PA 1122 CG1828-PA 944..1118 3..187 177 29.6 Plus
ncm-PA 1330 CG12750-PA 924..1081 48..208 177 28 Plus
CG31211-PA 874 CG31211-PA 700..874 11..181 175 30.8 Plus
CG31211-PB 893 CG31211-PB 719..893 11..181 175 30.8 Plus
CG10600-PA 1377 CG10600-PA 163..303 59..203 174 32.7 Plus
ncm-PA 1330 CG12750-PA 940..1118 13..204 174 22.9 Plus
CG10600-PC 1376 CG10600-PC 158..299 48..191 174 31.3 Plus
Muc68D-PB 1514 CG6004-PB 379..711 5..346 174 23.9 Plus
PNUTS-PA 628 CG33526-PA 171..415 38..271 173 28 Plus
PNUTS-PB 628 CG33526-PB 171..415 38..271 173 28 Plus
PNUTS-PE 1135 CG33526-PE 171..415 38..271 173 28 Plus
PNUTS-PD 1135 CG33526-PD 171..415 38..271 173 28 Plus
ncm-PA 1330 CG12750-PA 938..1140 2..204 173 25 Plus
CG8273-PB 874 CG8273-PB 70..310 11..203 173 22.8 Plus
CG8273-PA 874 CG8273-PA 70..310 11..203 173 22.8 Plus
SRm160-PA 954 CG11274-PA 691..903 10..215 173 24.2 Plus
B52-PN 350 CG10851-PN 157..350 5..200 172 29.2 Plus
B52-PC 350 CG10851-PC 157..350 5..200 172 29.2 Plus
B52-PA 350 CG10851-PA 157..350 5..200 172 29.2 Plus
B52-PO 355 CG10851-PO 162..355 5..200 172 29.2 Plus
B52-PM 355 CG10851-PM 162..355 5..200 172 29.2 Plus
CG6340-PB 513 CG6340-PB 34..265 17..248 171 22.9 Plus
ncm-PA 1330 CG12750-PA 932..1086 32..203 170 29.7 Plus
CG31921-PA 713 CG31921-PA 342..562 17..274 169 24.9 Plus
Muc68D-PB 1514 CG6004-PB 785..1066 9..300 168 23.8 Plus
CG10324-PA 543 CG10324-PA 305..539 1..246 168 28.1 Plus
CG14692-PE 2851 CG14692-PE 1093..1401 14..308 168 22.7 Plus
Muc68D-PB 1514 CG6004-PB 451..810 11..346 166 22.4 Plus
dre4-PA 1122 CG1828-PA 932..1108 31..203 165 29.8 Plus
CG14692-PE 2851 CG14692-PE 1152..1421 5..273 164 22.7 Plus
CG12877-PC 991 CG12877-PC 212..470 19..284 162 23.9 Plus
CG10600-PA 1377 CG10600-PA 155..449 3..271 160 24.1 Plus
CG10600-PA 1377 CG10600-PA 127..304 3..178 159 22.2 Plus
ear-PC 931 CG4913-PC 354..602 32..275 158 25.9 Plus
ear-PA 931 CG4913-PA 354..602 32..275 158 25.9 Plus
ear-PB 945 CG4913-PB 354..602 32..275 158 25.9 Plus
CG10600-PC 1376 CG10600-PC 144..303 7..178 158 25.7 Plus
Muc68D-PB 1514 CG6004-PB 808..1125 4..289 158 19.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 09:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24361-PA 715 GI24361-PA 280..715 143..566 1574 72.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 09:51:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24491-PA 699 GL24491-PA 78..699 1..566 1860 69 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 09:51:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19837-PA 699 GA19837-PA 78..699 1..566 1877 69.1 Plus
Dpse\GA19837-PB 566 GA19837-PB 159..566 174..566 1654 80.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 09:51:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26494-PA 643 GM26494-PA 78..643 1..566 2859 96.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 09:51:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21008-PA 640 GD21008-PA 78..640 1..566 2859 96.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 09:51:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24371-PA 677 GJ24371-PA 79..677 1..566 1724 65.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 09:51:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14059-PA 676 GK14059-PA 106..676 26..566 1679 65.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 09:51:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE10362-PA 645 GE10362-PA 78..645 1..566 2389 92.1 Plus

LD28673.hyp Sequence

Translation from 349 to 2049

> LD28673.hyp
MVAKEDPSIASTPTAIHNEEDSGKTKSSDEDPDQENKGGNSSSGEDLNTS
KHKSKHAKSTKHERSSSSRSHSKSRSDSDKKHKSSRHDKSKDRDKDREGQ
KEAKEHKEKKSNGEHKSKDSSKSSSSHKSSKSESHKSEHTKSKHEKDKTS
HSELKEVKDKSSKHKSSSSKSSKRSHSPPRHEEESQKAKIPKVKSKSEED
SADGFDSSMGANFDDVLGLLNIPISSKKSSSNSKSKFVAKPTAAPSSSAL
SAPTTAGSSKEALSTSSRPTSKKPELLASTAKLEPLDPNIALELPTISNN
YKPMPLNQTVMDVVFNQGGSHKAQASRYFNESEALAQGISSKTMRTKIYS
GVRTGQILQVPSLFDLCTRVLQKNIDALEYTGGVPFEVLRPVLERATPQQ
LLNFEEYNPYLMDDSDVLWQQHVQRHCRSQRREEMETWREMFLRCQEEKD
RKLSILAESIKASQKISEAPVRKTQLAFVDSMVKPPRSVQRKQEQYGTKG
KLIATPAARVAALSSVTPNAAKVGDARLRVLAAARDTAQVGAGPARSKKA
PLMAKTLQFMRGRLKR*

LD28673.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:47:11
Subject Length Description Subject Range Query Range Score Percent Strand
EloA-PB 566 CG6755-PB 1..566 1..566 2856 100 Plus
EloA-PA 643 CG6755-PA 78..643 1..566 2856 100 Plus
PNUTS-PA 628 CG33526-PA 225..461 18..269 239 31 Plus
PNUTS-PB 628 CG33526-PB 225..461 18..269 239 31 Plus
PNUTS-PE 1135 CG33526-PE 225..461 18..269 239 31 Plus
PNUTS-PA 628 CG33526-PA 282..518 17..281 223 30.9 Plus
PNUTS-PB 628 CG33526-PB 282..518 17..281 223 30.9 Plus
PNUTS-PA 628 CG33526-PA 171..415 38..271 173 28 Plus
PNUTS-PB 628 CG33526-PB 171..415 38..271 173 28 Plus