Clone LD28689 Report

Search the DGRC for LD28689

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:286
Well:89
Vector:pOT2
Associated Gene/Transcriptttk-RC
Protein status:LD28689.pep: gold
Preliminary Size:4072
Sequenced Size:3846

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1856 2002-06-13 Blastp of sequenced clone
ttk 2008-04-29 Release 5.5 accounting
ttk 2008-08-15 Release 5.9 accounting
ttk 2008-12-18 5.12 accounting

Clone Sequence Records

LD28689.complete Sequence

3846 bp (3846 high quality bases) assembled on 2002-06-13

GenBank Submission: AY122169

> LD28689.complete
CAAGACGGACGAAATATTGCCGACGACGCGCCGCTGCCAGAAAGAGAGTT
TCTTCCGCTCACGCGCGCCCCCCTCTCTACATATACATATGTTTCTTGCT
CTCGCGCTGAGTTGTGAAAATTTCCACAAGTTAAAATTAAATGAAAAAAG
TGCAAAGGAAGCAGGCGAAATAGCGAATAGTAATTTCGGTTTAACAACTG
CGGGCAGTGCACTAGTAACCCTTTAAATGTGATGAAAGAGTGGAGAAACT
ATTGGTGTTTCCAACGAATAAGTTTAAACTTCTAATACAAACTGAATAAG
CACGCCCTGGAATATATGTTTTAGCAGCTGTCAGGCCCCAAGGAGTAAGA
ATCCGAACCCAGGACAACGAAAGGACCTTTGATGCCCCACTTGCATGAGG
ACATAGATCGCGATCGCACACACTCGGACATCGCTTAGTGACGCAACCAC
AGCCTCCCAATGAAGATGGCATCTCAACGCTTCTGCCTGCGGTGGAACAA
CCACCAGAGCAACCTTCTGTCCGTCTTCGACCAGCTGTTGCACGCAGAAA
CCTTCACAGATGTGACGCTGGCCGTCGAGGGGCAACACCTGAAGGCACAC
AAGATGGTGCTATCCGCCTGCAGTCCCTACTTTAATACCCTCTTTGTAAG
TCATCCGGAAAAGCATCCGATTGTCATACTTAAGGATGTGCCCTACTCGG
ACATGAAGTCGTTGCTAGACTTTATGTACAGGGGCGAGGTCTCAGTGGAC
CAGGAGCGACTCACTGCATTCCTGCGCGTGGCCGAGAGCCTGCGCATCAA
GGGCCTCACCGAGGTCAACGACGACAAGCCCTCGCCGGCAGCAGCAGCTG
CAGGAGCGGGTGCGACGGGCTCTGAGAGCACAGCCACTACACCCCAGCTG
CAGCGCATCCAACCGTATTTGGTGCCCCAGCGGAATCGCTCGCAGGCCGG
CGGTCTGCTGGCCAGTGCCGCCAATGCCGGAAATACACCCACCCTGCCGG
TGCAGCCATCGCTGCTCAGCTCGGCCCTGATGCCCAAGCGAAAGAGGGGC
AGACCCCGGAAGCTATCTGGCAGCTCGAATGGCACGGGGAACGACTACGA
CGACTTTGATCGCGAGAACATGATGAACGACTCCTCCGACCTGGGCAACG
GCAAAATGTGCAACGAGTCCTACTCCGGCAATGACGATGGCTCCGACGAC
AATCAGCCGAACGCAGGACACACGGATGATCTAAATGAAAGTCGCGATTC
TCTGCCCTCGAAACGATCAAAGAACTCCAAGGATCACCGCGTGGTGAGCC
ATCATGAAGACAACAGCACTTCCGACGGAAACGACAGCGATGGCGAAGGT
CTGGACACATCATATATGGAACCTCAACTTATGCTGGACGAATATGACGA
GCCCGTAGAGTTCAAGTACAACCCGCTCACCGACAACAGCTCACCCACGC
AGGACCACACGGATGGTAGTCACCTCAACGAGCAGGCGCGCCAACAAGCC
TTCCTCATCGCTGCCCAGAGAAAACACCAGGTGGAAACAGCAGCAGCGGC
GGCGGCCAGCGGAATCAAACTTAACATTATCGGAATGGCGGCTGGTGGAG
CGCAGGTGAAAAGCATGGTCAGCATACCCAAACTAACGCCCATTGGCAAG
GTCAACGCCGCCTCCACGCCATTGGTCTCGCCTGCCGGCTCCTTTTCCAC
AGCCACGGTCAAGCCGCGCGTCCAGAAGCGGCCCAAACTGGGCAAACAGA
ACGGCGATGTAAAACCGGCTGTGTTTAGCAGCCAGGAATACCTCGACATT
TACAACAGCAACGATGGATTCAAGTTGAAGGCTGCTGGTCTGAGCGGAAG
CACGCCGAACCTGAGTGCTGGATTAGGAACTCCCTCTGTCAAAACCAAGC
TGAATCTTAGCAGCAACGTTGGCGAGGGCGAGGCGGAGGGCTCAGTGAGG
GACTACTGCACCAAAGAGGGCGAGCATACGTACCGATGCAAAGTCTGCTC
CCGCGTCTACACGCACATTAGTAACTTCTGCCGTCACTATGTTACCTCCC
ACAAGCGAAATGTGAAAGTGTACCCCTGTCCCTTCTGCTTCAAAGAGTTT
ACGCGCAAGGACAATATGACGGCGCACGTGAAAATCATCCACAAGATCGA
AAATCCCTCGACGGCGTTGGCCACAGTCGCGGCAGCGAATCTAGCAGGCC
AGCCACTGGGAGTTTCGGGAGCCTCGACGCCTCCGCCGCCGGATCTGAGT
GGTCAGAACTCAAATCAGTCGCTGCCAGCCACCAGCAATGCGCTATCCAC
CTCCTCCTCGTCGTCGACGTCCTCGTCCAGCGGATCCCTGGGTCCGTTGA
CGACCTCCGCACCGCCAGCACCAGCAGCTGCGGCGCAGTAATCTCTGGGC
ACCTCACACCAAGCCCAAAAAAGCACACACTCAAAGAAATAGTGAGGTTG
AGGCACTCGCGAACGATTGGAGGAAGCATGTTGCAGCGCCAGGCGCTCTT
CGGGATTTAGTTGTTGTTGGGGAGGGGAGTTAAAGTAAACTTTTTGTTGA
TTTTGTTTTTAGTTTTTTACTTGGCTTCGATGGAGCTGCAGAAATCTCCA
AGCCAGCAGACGTTTTTATGTTGTGCAATTTACCTTTTCAGTTACAATTA
CACTTATTTTCTAAACCCCCTTTCAAAGACCCGATCAGAACGGAAAGCTA
ATCTAATCCTAGCAACTACCCTTAAGATTTACGATTATTATTTATCCCCG
ATCGCCGACAACGTGTCGATCGTTTTTTATTAGCGCGTAGTCAAAGACCG
AAAATCAAGTAGTTGCTTTGGCTGACACTTTACAAACCCATCCACTAGGG
GTTGCCTTTTTATTGGACACCAGAGCGGCCTTATATGCGAAGTGTATCCG
GGCAAGAGTTACACTAAAAACCGAAACTAAACCTGCACTTTTAGATAATT
AAACTATATATACACGCGGATATGTTATACATAATGATATAAATAATATA
TATAAACATTGAATGGTATGTCTAGCTGTAGTTCTATTAATTAATTTATC
AATATCACTATGTTCGATATGCTAATGTTAATTCTATAAAATTATTACAA
GCCGAAATCTGAAAACAGAAGCAGGATAATCAATGTAATGTTAATCTTGC
GAGAGGGAGCGCAGATCTACCTTGTTGCCTTCAAATGAAGCTAGTTAAAA
GTTAATCCCGGGTCTGGGTCAAGGTCGTTGGGCACCCAGCACCACACCCA
GAATACCCAGCACGTCCACACCCTCAAAAACCAACCCGGTCACCGGTCAC
CCACACCGTTCCCCGTAACATCCGAGACCCGGCGAAAGATTGAAAATGTT
TCGTCGGGATCGTTGATAAAGTGTAACTACAGATAGTAACAGCAACCATA
GTTGTAATGATATAACGCTAATATTAATGAGCATAAAGTAAACCTAATTT
ATCTATCAAACGATTTATGTTGTATATCGGAGGCTTAAATTATCGCCAAA
GAAAATGAAAATCAAAAACAAAAACAAAAGCAAAAGCAAAACAAAATGCA
GTTGAAATCCAACAGTAACAACAGAGCAGTCGCAGCAGACCACAAAATAT
TGTTGTTAATGCGAAACGATCTCCAAACAAAATAAAGAACTTGAAAAGTA
GACAACAAGTAATTCCTCAGTCAAGTAAAACGTTCAAATTTGTTGCAATT
CGAGAACTAAGAGAAAACTACGAAAAAGATTCAGAAAATTACAACTGCAA
AAAACGTACAGAAAACCAATTGAAACAAAATTAAGCGCAATCAAATAATA
AACAAGCTGCGTACGCTAACTTATTAAAAAAAAAAAAAAAAAAAAA

LD28689.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:46:45
Subject Length Description Subject Range Query Range Score Percent Strand
ttk.f 4595 ttk.f 71..3898 1..3828 19140 100 Plus
ttk-RC 4595 ttk-RC 71..3898 1..3828 19140 100 Plus
ttk-RD 4756 ttk-RD 500..4028 300..3828 17645 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:13:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 27551982..27554483 1324..3825 12510 100 Plus
chr3R 27901430 chr3R 27549972..27550613 602..1243 3195 99.8 Plus
chr3R 27901430 chr3R 27549482..27549786 299..603 1525 100 Plus
chr3R 27901430 chr3R 27547384..27547683 1..300 1500 100 Plus
chr3R 27901430 chr3R 27550744..27550831 1237..1324 440 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:21:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:13:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31729631..31732135 1324..3828 12525 100 Plus
3R 32079331 3R 31727620..31728261 602..1243 3195 99.8 Plus
3R 32079331 3R 31727130..31727434 299..603 1525 100 Plus
3R 32079331 3R 31725032..31725331 1..300 1500 100 Plus
3R 32079331 3R 31728392..31728479 1237..1324 440 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:19:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 31470462..31472966 1324..3828 12525 100 Plus
3R 31820162 3R 31468451..31469092 602..1243 3195 99.8 Plus
3R 31820162 3R 31467961..31468265 299..603 1525 100 Plus
3R 31820162 3R 31465863..31466162 1..300 1500 100 Plus
3R 31820162 3R 31469223..31469310 1237..1324 440 100 Plus
Blast to na_te.dros performed 2019-03-16 05:13:25
Subject Length Description Subject Range Query Range Score Percent Strand
blood 7410 blood BLOOD 7410bp 6744..6926 2916..3097 135 57.5 Plus

LD28689.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:14:00 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 27547384..27547683 1..300 100 -> Plus
chr3R 27549484..27549786 301..603 100 -> Plus
chr3R 27549974..27550606 604..1236 100 -> Plus
chr3R 27550744..27550831 1237..1324 100 -> Plus
chr3R 27551983..27554483 1325..3825 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:08:32 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RD 1..1932 460..2391 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:21:27 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RD 1..1932 460..2391 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:08:10 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RC 1..1932 460..2391 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:12:18 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RD 1..1932 460..2391 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:00:08 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RC 1..1932 460..2391 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:47:37 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RC 24..3848 1..3825 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:21:27 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RC 24..3848 1..3825 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:08:10 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RC 37..3861 1..3825 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:12:18 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RC 24..3848 1..3825 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:00:08 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
ttk-RC 37..3861 1..3825 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:14:00 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31727132..31727434 301..603 100 -> Plus
3R 31725032..31725331 1..300 100 -> Plus
3R 31727622..31728254 604..1236 100 -> Plus
3R 31728392..31728479 1237..1324 100 -> Plus
3R 31729632..31732132 1325..3825 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:14:00 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31727132..31727434 301..603 100 -> Plus
3R 31725032..31725331 1..300 100 -> Plus
3R 31727622..31728254 604..1236 100 -> Plus
3R 31728392..31728479 1237..1324 100 -> Plus
3R 31729632..31732132 1325..3825 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:14:00 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31727132..31727434 301..603 100 -> Plus
3R 31725032..31725331 1..300 100 -> Plus
3R 31727622..31728254 604..1236 100 -> Plus
3R 31728392..31728479 1237..1324 100 -> Plus
3R 31729632..31732132 1325..3825 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:08:10 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 27550754..27551053 1..300 100 -> Plus
arm_3R 27552854..27553156 301..603 100 -> Plus
arm_3R 27553344..27553976 604..1236 100 -> Plus
arm_3R 27554114..27554201 1237..1324 100 -> Plus
arm_3R 27555354..27557854 1325..3825 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:44:57 Download gff for LD28689.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31465863..31466162 1..300 100 -> Plus
3R 31467963..31468265 301..603 100 -> Plus
3R 31468453..31469085 604..1236 100 -> Plus
3R 31469223..31469310 1237..1324 100 -> Plus
3R 31470463..31472963 1325..3825 100   Plus

LD28689.pep Sequence

Translation from 459 to 2390

> LD28689.pep
MKMASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMV
LSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQER
LTAFLRVAESLRIKGLTEVNDDKPSPAAAAAGAGATGSESTATTPQLQRI
QPYLVPQRNRSQAGGLLASAANAGNTPTLPVQPSLLSSALMPKRKRGRPR
KLSGSSNGTGNDYDDFDRENMMNDSSDLGNGKMCNESYSGNDDGSDDNQP
NAGHTDDLNESRDSLPSKRSKNSKDHRVVSHHEDNSTSDGNDSDGEGLDT
SYMEPQLMLDEYDEPVEFKYNPLTDNSSPTQDHTDGSHLNEQARQQAFLI
AAQRKHQVETAAAAAASGIKLNIIGMAAGGAQVKSMVSIPKLTPIGKVNA
ASTPLVSPAGSFSTATVKPRVQKRPKLGKQNGDVKPAVFSSQEYLDIYNS
NDGFKLKAAGLSGSTPNLSAGLGTPSVKTKLNLSSNVGEGEAEGSVRDYC
TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRK
DNMTAHVKIIHKIENPSTALATVAAANLAGQPLGVSGASTPPPPDLSGQN
SNQSLPATSNALSTSSSSSTSSSSGSLGPLTTSAPPAPAAAAQ*

LD28689.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:43:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22979-PA 648 GF22979-PA 1..615 1..611 2768 86.9 Plus
Dana\GF10078-PA 1088 GF10078-PA 196..310 6..120 434 60.9 Plus
Dana\GF11096-PA 562 GF11096-PA 5..117 6..118 425 62.8 Plus
Dana\GF10081-PA 995 GF10081-PA 104..219 6..121 425 57.8 Plus
Dana\GF24270-PA 746 GF24270-PA 1..120 3..122 420 60.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:43:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11824-PA 813 GG11824-PA 1..288 1..288 1430 95.5 Plus
Dere\GG14622-PA 1074 GG14622-PA 198..312 6..120 431 60 Plus
Dere\GG22728-PA 610 GG22728-PA 5..117 6..118 429 62.8 Plus
Dere\GG14626-PA 528 GG14626-PA 100..214 6..120 428 58.3 Plus
Dere\GG14906-PA 743 GG14906-PA 1..120 3..122 420 60.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:43:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18647-PA 680 GH18647-PA 1..648 3..610 2286 71.7 Plus
Dgri\GH15666-PA 655 GH15666-PA 207..334 5..138 436 55.2 Plus
Dgri\GH20621-PA 1032 GH20621-PA 5..117 6..118 429 63.7 Plus
Dgri\GH15669-PA 517 GH15669-PA 118..229 8..119 425 59.8 Plus
Dgri\GH15390-PA 812 GH15390-PA 1..136 3..141 421 56.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
ttk-PH 643 CG1856-PH 1..643 1..643 3328 100 Plus
ttk-PD 643 CG1856-PD 1..643 1..643 3328 100 Plus
ttk-PC 643 CG1856-PC 1..643 1..643 3328 100 Plus
ttk-PF 643 CG1856-PF 1..643 1..643 3328 100 Plus
ttk-PG 813 CG1856-PG 1..288 1..288 1498 100 Plus
ttk-PA 813 CG1856-PA 1..288 1..288 1498 100 Plus
ttk-PB 813 CG1856-PB 1..288 1..288 1498 100 Plus
ttk-PE 813 CG1856-PE 1..288 1..288 1498 100 Plus
br-PA 702 CG11491-PA 4..641 5..562 441 25.7 Plus
br-PO 663 CG11491-PO 4..645 5..577 422 27.2 Plus
br-PG 663 CG11491-PG 4..645 5..577 422 27.2 Plus
bab1-PC 970 CG9097-PC 98..242 4..144 414 53.1 Plus
bab1-PD 971 CG9097-PD 98..242 4..144 414 53.1 Plus
bab1-PE 976 CG9097-PE 98..242 4..144 414 53.1 Plus
bab1-PB 977 CG9097-PB 98..242 4..144 414 53.1 Plus
bab2-PB 1066 CG9102-PB 196..536 6..381 410 31 Plus
bab2-PA 1067 CG9102-PA 196..536 6..381 410 31 Plus
lola-PY 577 CG12052-PY 5..560 6..619 409 24.3 Plus
br-PN 724 CG11491-PN 4..706 5..577 400 25.5 Plus
br-PM 724 CG11491-PM 4..706 5..577 400 25.5 Plus
br-PE 724 CG11491-PE 4..706 5..577 400 25.5 Plus
lola-PK 546 CG12052-PK 5..515 6..558 398 24.7 Plus
lola-PF 565 CG12052-PF 5..556 6..558 397 24.4 Plus
lola-PM 465 CG12052-PM 5..196 6..211 392 40.8 Plus
lola-PH 518 CG12052-PH 5..196 6..211 392 40.8 Plus
lola-PV 549 CG12052-PV 5..196 6..211 392 40.8 Plus
lola-PU 575 CG12052-PU 5..196 6..211 392 40.8 Plus
lola-PT 575 CG12052-PT 5..196 6..211 392 40.8 Plus
lola-PX 602 CG12052-PX 5..196 6..211 392 40.8 Plus
lola-PQ 603 CG12052-PQ 5..196 6..211 392 40.8 Plus
lola-PL 608 CG12052-PL 5..196 6..211 392 40.8 Plus
lola-PZ 665 CG12052-PZ 5..196 6..211 392 40.8 Plus
lola-PO 668 CG12052-PO 5..196 6..211 392 40.8 Plus
lola-PA 706 CG12052-PA 5..196 6..211 392 40.8 Plus
lola-PE 748 CG12052-PE 5..196 6..211 392 40.8 Plus
lola-PD 748 CG12052-PD 5..196 6..211 392 40.8 Plus
lola-PJ 757 CG12052-PJ 5..196 6..211 392 40.8 Plus
lola-PW 771 CG12052-PW 5..196 6..211 392 40.8 Plus
lola-PB 787 CG12052-PB 5..196 6..211 392 40.8 Plus
lola-PC 787 CG12052-PC 5..196 6..211 392 40.8 Plus
lola-PR 891 CG12052-PR 5..196 6..211 392 40.8 Plus
lola-PG 891 CG12052-PG 5..196 6..211 392 40.8 Plus
lola-PP 963 CG12052-PP 5..196 6..211 392 40.8 Plus
lola-PI 970 CG12052-PI 5..196 6..211 392 40.8 Plus
BtbVII-PE 743 CG43365-PE 1..137 3..139 391 54.7 Plus
BtbVII-PD 743 CG43365-PD 1..137 3..139 391 54.7 Plus
BtbVII-PB 743 CG11494-PB 1..137 3..139 391 54.7 Plus
BtbVII-PA 743 CG11494-PA 1..137 3..139 391 54.7 Plus
BtbVII-PI 747 CG43365-PI 1..137 3..139 391 54.7 Plus
BtbVII-PH 748 CG43365-PH 1..137 3..139 391 54.7 Plus
BtbVII-PG 816 CG43365-PG 1..137 3..139 391 54.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:43:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23126-PA 653 GI23126-PA 1..621 1..611 2416 75.4 Plus
Dmoj\GI12710-PA 1127 GI12710-PA 188..312 6..135 431 56.9 Plus
Dmoj\GI20175-PA 626 GI20175-PA 5..117 6..118 430 63.7 Plus
Dmoj\GI12711-PA 539 GI12711-PA 130..242 8..120 422 58.4 Plus
Dmoj\GI12995-PA 794 GI12995-PA 1..136 3..141 420 56.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:43:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23993-PA 415 GL23993-PA 1..278 1..288 1257 84.7 Plus
Dper\GL17189-PA 680 GL17189-PA 5..128 6..129 433 60.5 Plus
Dper\GL20785-PA 963 GL20785-PA 1..120 3..122 421 60.8 Plus
Dper\GL23182-PA 258 GL23182-PA 3..118 6..121 389 58.6 Plus
Dper\GL10513-PA 126 GL10513-PA 5..117 6..118 367 57.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:43:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\ttk-PB 640 GA14992-PB 1..628 1..632 2621 85 Plus
Dpse\ttk-PA 827 GA14992-PA 1..278 1..288 1254 85.1 Plus
Dpse\GA28270-PA 592 GA28270-PA 195..331 6..153 440 52.7 Plus
Dpse\GA30442-PS 461 GA30442-PS 5..128 6..129 437 60.5 Plus
Dpse\GA30442-PG 490 GA30442-PG 5..128 6..129 434 60.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:43:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16442-PA 643 GM16442-PA 1..643 1..643 3374 97.8 Plus
Dsec\GM14235-PA 575 GM14235-PA 196..310 6..120 432 60 Plus
Dsec\GM20503-PA 612 GM20503-PA 5..117 6..118 429 62.8 Plus
Dsec\GM14240-PA 541 GM14240-PA 100..214 6..120 426 58.3 Plus
Dsec\GM14532-PA 743 GM14532-PA 1..120 3..122 420 60.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\ttk-PA 813 GD21596-PA 1..288 1..288 1548 99 Plus
Dsim\GD13495-PA 1066 GD13495-PA 196..310 6..120 431 60 Plus
Dsim\lola-PA 671 GD25965-PA 63..175 6..118 427 62.8 Plus
Dsim\fru-PA 1021 GD20167-PA 168..303 6..134 389 52.9 Plus
Dsim\GD25412-PA 127 GD25412-PA 1..118 1..118 368 55.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:43:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23100-PA 654 GJ23100-PA 1..622 3..610 2386 75.7 Plus
Dvir\GJ12695-PA 635 GJ12695-PA 191..304 6..119 434 61.4 Plus
Dvir\GJ12698-PA 524 GJ12698-PA 108..222 6..120 429 58.3 Plus
Dvir\GJ20132-PA 998 GJ20132-PA 5..117 6..118 429 63.7 Plus
Dvir\GJ13138-PA 798 GJ13138-PA 1..156 3..145 421 52.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12114-PA 799 GK12114-PA 1..287 1..288 1066 75.2 Plus
Dwil\GK16859-PA 530 GK16859-PA 53..167 5..119 427 60.9 Plus
Dwil\GK10673-PA 1051 GK10673-PA 5..127 6..131 425 58.7 Plus
Dwil\GK16863-PA 1092 GK16863-PA 111..224 6..119 422 58.8 Plus
Dwil\GK17760-PA 1395 GK17760-PA 1..120 3..122 420 60.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\ttk-PA 813 GE10957-PA 1..288 1..288 1444 96.2 Plus
Dyak\GE20983-PA 1072 GE20983-PA 203..317 6..120 432 60 Plus
Dyak\GE13086-PA 610 GE13086-PA 5..117 6..118 429 62.8 Plus
Dyak\bab1-PA 542 GE20985-PA 100..214 6..120 428 58.3 Plus
Dyak\GE20360-PA 741 GE20360-PA 1..120 3..122 420 60.8 Plus

LD28689.hyp Sequence

Translation from 459 to 2390

> LD28689.hyp
MKMASQRFCLRWNNHQSNLLSVFDQLLHAETFTDVTLAVEGQHLKAHKMV
LSACSPYFNTLFVSHPEKHPIVILKDVPYSDMKSLLDFMYRGEVSVDQER
LTAFLRVAESLRIKGLTEVNDDKPSPAAAAAGAGATGSESTATTPQLQRI
QPYLVPQRNRSQAGGLLASAANAGNTPTLPVQPSLLSSALMPKRKRGRPR
KLSGSSNGTGNDYDDFDRENMMNDSSDLGNGKMCNESYSGNDDGSDDNQP
NAGHTDDLNESRDSLPSKRSKNSKDHRVVSHHEDNSTSDGNDSDGEGLDT
SYMEPQLMLDEYDEPVEFKYNPLTDNSSPTQDHTDGSHLNEQARQQAFLI
AAQRKHQVETAAAAAASGIKLNIIGMAAGGAQVKSMVSIPKLTPIGKVNA
ASTPLVSPAGSFSTATVKPRVQKRPKLGKQNGDVKPAVFSSQEYLDIYNS
NDGFKLKAAGLSGSTPNLSAGLGTPSVKTKLNLSSNVGEGEAEGSVRDYC
TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRK
DNMTAHVKIIHKIENPSTALATVAAANLAGQPLGVSGASTPPPPDLSGQN
SNQSLPATSNALSTSSSSSTSSSSGSLGPLTTSAPPAPAAAAQ*

LD28689.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:31:20
Subject Length Description Subject Range Query Range Score Percent Strand
ttk-PH 643 CG1856-PH 1..643 1..643 3328 100 Plus
ttk-PD 643 CG1856-PD 1..643 1..643 3328 100 Plus
ttk-PC 643 CG1856-PC 1..643 1..643 3328 100 Plus
ttk-PF 643 CG1856-PF 1..643 1..643 3328 100 Plus
ttk-PG 813 CG1856-PG 1..288 1..288 1498 100 Plus