BDGP Sequence Production Resources |
Search the DGRC for LD28822
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 288 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | mtm-RA |
Protein status: | LD28822.pep: gold |
Preliminary Size: | 2270 |
Sequenced Size: | 2072 |
Gene | Date | Evidence |
---|---|---|
CG9115 | 2001-01-01 | Release 2 assignment |
CG9115 | 2001-09-19 | Blastp of sequenced clone |
CG9115 | 2003-01-01 | Sim4 clustering to Release 3 |
mtm | 2008-04-29 | Release 5.5 accounting |
mtm | 2008-08-15 | Release 5.9 accounting |
mtm | 2008-12-18 | 5.12 accounting |
2072 bp (2072 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058594
> LD28822.complete AATTGCATTTAGCTAACAATTGGAAAAGAAAACACAGCTGCAACCAGCAA CACAATAGCCAAACACCACTCGTGTCCATCCGAAAATGGATCCCTCCGCG AGCCTGGCCGACAAGTTGGCCTCCAAGACTGCCAGCAGCAACTCTCTGGA CAGCAGCTCCAAGTCCAGTTCGCTGGGCTCCAAGCACGGTGGCGGAGAAA ACGGCATTCTGCGGGACACGCCCTTCGGCTATCTGGAGGGCGAAGAGGAC CAGGACCAGAAGAACGACGTGACCTACGTGTGTCCGTACCGCGGCCCCGT CTTCGGCGCTCTTACCATAACCAACTACCGTCTGTACTTCCGGTCGCTTC CCCTGCGGGATCAGGAGCCGCCCGTCGTCGTCGACGTGCCTCTGGGCGTG ATCGCGCGTGTGGAGAAGATTGGAGGTGCCACGTCTCGCGGTGAGAACTC GTACGGCATCGAGATTTTCTGCAAGGACATGCGAAACCTGCGATTCGCCC ACAAGCAGCAGAATCATTCGCGGAGGACGGTGTTTGAGAAACTGCAGGCC AACGCCTTTCCGCTCTCGTACAGTGGGCGCCTCTTTGCATTCGCCCACGC CGCGGCCAACTCTGTGAACGGTAACGGAGGCTGGGACGGCTGGGCGGTAT ATGAACCGCTGGCGGAGCTGCGCCGCTTGGGCGTTCCCAACGATATGTGG CGGGCGACCAAGCTAAACGAGTCCTACGCAATTTGCGACAGCTATCCGGC CGTGTGGGCTGTGCCCAAAGCGGCCTCCGATGATTTCCTGAGGCGCGTGG CACAGTTCCGATCGCGCTGCCGCCTGCCGGTTTTGTCCTGGATGAACCCA CGGACTCAAGCGACCATTACAAGGTGTTCCCAGCCGCTGGTGGGTGTAAG TGGCAAGCGAAATTCCGACGATGAAGCATACCTAAGCTTTATCATGGAGG CGAACGCCCAGTCAGACAAGTTGACCATCATGGATGCGCGACCAAGCGCC AATGCGATTGCTAACAAGGCCAAGGGCGGCGGCTACGAGTCAGAGGACGC GTACAAGAACGTGGAAATCAACTTCCTCGACATACACAACATCCACGTGA TGCGGGAGAGCCTACGCAAAGTGAAGGAGGCTTGCTTCCCCACCACCGAC GACTCAAAGTGGCAGACGGCTATTGACAACACACTGTGGCTAAAGCACAT TAGGTGCATCCTGGCCGGCGCCGTTAGGATTGTTGACAAGGTGGAGACCA TGAGCACCTCCGTCGTAGTTCACTGCTCCGACGGCTGGGATCGCACAGCC CAGCTGACTGCTCTTTCCATGTTGCTGCTCGATCCGCACTATCGCACAGT GCGCGGTTTCGAGGTTCTCATTGAGAAGGAGTGGCTCTCCTTTGGCCACA AGTTCCAACAACGCATTGGTCACGGCGACAACAAGCACTCGGATGCAGAC AGATCTCCGGTGTTCCTGCAATTTATCGATAGCGTCTGGCAGGTTAGCCA GCAGTTCAACAACGCATTTGAGTTCAACGAGCACTTCCTGATAACCATCG TGGATCATCTGTACTCGTGCCGCTTCGGCACCTTCCTCTGCAACACGGAG GCCGAGCGTGTGGCCGAAGATCTCAAGCACAAGACAACATCCCTGTGGAC GCACATCAACTCGTCGCTGGACCAGTATTTGAATCCACTCTTTCCCTCGT TCACGCACGGCGCCGAGCTAGTGCTGCGTCCGATTGCCAGCGTGAGATCG GTCCGCTTGTGGAAGGGCCTATACTGTCGCTGGAATCCTGGTCTGTGCGC TCCTCAGCATGGCTGCCAGCGAACCCGCGAACTGCTATCCAAGCAGGACC AGCTCTTTAAGCTCGTCAACGAGCTGCGGCTCAAGTCGAACAACCGCAGC AACAGCATGCAGACAACTACGCGACTGGCCTCGCCTATGCACTAATAGTA TTGCTTTTTTATTCCCCCTACTTGTACGCATATGTAGTGCACGTATTGTG AACTACGTTCTAATTCCAAATAAAAGTTTTTCTTAAATGGAAAACTAAAA AAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mtm-RA | 2215 | mtm-RA | 89..2135 | 1..2047 | 10235 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6033847..6034273 | 1620..2046 | 100 | <- | Minus |
chr2L | 6034329..6035947 | 1..1619 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 1..1860 | 86..1945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 1..1860 | 86..1945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 1..1860 | 86..1945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 1..1860 | 86..1945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 1..1860 | 86..1945 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 25..2070 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 25..2070 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 42..2087 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 25..2070 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
mtm-RA | 22..2067 | 1..2046 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6034796..6035222 | 1620..2046 | 100 | <- | Minus |
2L | 6035278..6036896 | 1..1619 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6034796..6035222 | 1620..2046 | 100 | <- | Minus |
2L | 6035278..6036896 | 1..1619 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6034796..6035222 | 1620..2046 | 100 | <- | Minus |
2L | 6035278..6036896 | 1..1619 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6034796..6035222 | 1620..2046 | 100 | <- | Minus |
arm_2L | 6035278..6036896 | 1..1619 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6034796..6035222 | 1620..2046 | 100 | <- | Minus |
2L | 6035278..6036896 | 1..1619 | 100 | Minus |
Translation from 85 to 1944
> LD28822.pep MDPSASLADKLASKTASSNSLDSSSKSSSLGSKHGGGENGILRDTPFGYL EGEEDQDQKNDVTYVCPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVD VPLGVIARVEKIGGATSRGENSYGIEIFCKDMRNLRFAHKQQNHSRRTVF EKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLAELRRLGV PNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVL SWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMD ARPSANAIANKAKGGGYESEDAYKNVEINFLDIHNIHVMRESLRKVKEAC FPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMSTSVVVHCSDG WDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNK HSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTF LCNTEAERVAEDLKHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLRPI ASVRSVRLWKGLYCRWNPGLCAPQHGCQRTRELLSKQDQLFKLVNELRLK SNNRSNSMQTTTRLASPMH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14283-PA | 619 | GF14283-PA | 1..619 | 1..619 | 3024 | 95 | Plus |
Dana\GF11853-PA | 761 | GF11853-PA | 93..574 | 69..570 | 891 | 39.2 | Plus |
Dana\GF19035-PA | 1120 | GF19035-PA | 52..611 | 74..563 | 758 | 32.6 | Plus |
Dana\GF24368-PA | 622 | GF24368-PA | 216..614 | 205..610 | 444 | 29 | Plus |
Dana\GF16615-PA | 1966 | GF16615-PA | 1327..1636 | 304..560 | 359 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10145-PA | 619 | GG10145-PA | 1..619 | 1..619 | 3355 | 99.8 | Plus |
Dere\GG20035-PA | 761 | GG20035-PA | 93..574 | 69..570 | 887 | 39 | Plus |
Dere\GG17949-PA | 1075 | GG17949-PA | 163..578 | 142..513 | 684 | 35.1 | Plus |
Dere\GG14362-PA | 622 | GG14362-PA | 216..602 | 205..598 | 448 | 29.9 | Plus |
Dere\GG17190-PA | 1974 | GG17190-PA | 1344..1546 | 318..508 | 351 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10708-PA | 613 | GH10708-PA | 1..612 | 1..618 | 2932 | 90.3 | Plus |
Dgri\GH20661-PA | 764 | GH20661-PA | 92..573 | 69..570 | 890 | 39.4 | Plus |
Dgri\GH12561-PA | 1219 | GH12561-PA | 52..598 | 74..563 | 745 | 32.7 | Plus |
Dgri\GH16535-PA | 622 | GH16535-PA | 216..570 | 205..566 | 455 | 31.6 | Plus |
Dgri\GH23138-PA | 1972 | GH23138-PA | 1364..1547 | 331..508 | 352 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mtm-PB | 619 | CG9115-PB | 1..619 | 1..619 | 3277 | 100 | Plus |
mtm-PA | 619 | CG9115-PA | 1..619 | 1..619 | 3277 | 100 | Plus |
CG3530-PC | 639 | CG3530-PC | 3..452 | 106..570 | 857 | 40.3 | Plus |
CG3530-PB | 689 | CG3530-PB | 53..502 | 106..570 | 857 | 40.3 | Plus |
CG3530-PA | 761 | CG3530-PA | 125..574 | 106..570 | 857 | 40.3 | Plus |
CG3632-PJ | 1119 | CG3632-PJ | 216..632 | 194..563 | 730 | 36.7 | Plus |
CG3632-PI | 1241 | CG3632-PI | 216..632 | 194..563 | 730 | 36.7 | Plus |
CG3632-PH | 1241 | CG3632-PH | 216..632 | 194..563 | 730 | 36.7 | Plus |
CG3632-PG | 1241 | CG3632-PG | 216..632 | 194..563 | 730 | 36.7 | Plus |
CG3632-PF | 1241 | CG3632-PF | 216..632 | 194..563 | 730 | 36.7 | Plus |
CG3632-PE | 1250 | CG3632-PE | 225..641 | 194..563 | 730 | 36.7 | Plus |
CG5026-PC | 620 | CG5026-PC | 196..600 | 179..598 | 457 | 30 | Plus |
CG5026-PB | 620 | CG5026-PB | 196..600 | 179..598 | 457 | 30 | Plus |
CG5026-PA | 620 | CG5026-PA | 196..600 | 179..598 | 457 | 30 | Plus |
Sbf-PB | 1973 | CG6939-PB | 1344..1546 | 318..508 | 340 | 36 | Plus |
Sbf-PA | 1993 | CG6939-PA | 1364..1566 | 318..508 | 340 | 36 | Plus |
CG14411-PD | 843 | CG14411-PD | 210..589 | 125..509 | 305 | 26.8 | Plus |
CG14411-PC | 843 | CG14411-PC | 210..589 | 125..509 | 305 | 26.8 | Plus |
CG14411-PB | 843 | CG14411-PB | 210..589 | 125..509 | 305 | 26.8 | Plus |
CG14411-PA | 843 | CG14411-PA | 210..589 | 125..509 | 305 | 26.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11288-PA | 624 | GI11288-PA | 1..624 | 1..619 | 3006 | 92.7 | Plus |
Dmoj\GI19024-PA | 760 | GI19024-PA | 92..573 | 69..570 | 886 | 39.2 | Plus |
Dmoj\GI11214-PA | 766 | GI11214-PA | 1..264 | 295..563 | 619 | 42 | Plus |
Dmoj\GI13823-PA | 614 | GI13823-PA | 208..562 | 205..566 | 450 | 31.5 | Plus |
Dmoj\GI10301-PA | 1974 | GI10301-PA | 1364..1644 | 331..559 | 361 | 31.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19086-PA | 579 | GL19086-PA | 1..579 | 1..619 | 2820 | 89.3 | Plus |
Dper\GL17566-PA | 760 | GL17566-PA | 93..574 | 69..570 | 901 | 39.4 | Plus |
Dper\GL21339-PA | 1215 | GL21339-PA | 371..634 | 295..563 | 624 | 42.8 | Plus |
Dper\GL12246-PA | 1978 | GL12246-PA | 1349..1551 | 318..508 | 356 | 36.9 | Plus |
Dper\GL15069-PA | 570 | GL15069-PA | 211..492 | 205..493 | 331 | 30.6 | Plus |
Dper\GL21339-PA | 1215 | GL21339-PA | 211..309 | 194..291 | 181 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21553-PA | 619 | GA21553-PA | 1..619 | 1..619 | 3261 | 96.3 | Plus |
Dpse\GA17504-PB | 677 | GA17504-PB | 8..489 | 69..570 | 902 | 39.4 | Plus |
Dpse\GA17504-PA | 762 | GA17504-PA | 93..574 | 69..570 | 901 | 39.4 | Plus |
Dpse\GA22870-PB | 1178 | GA22870-PB | 371..634 | 295..563 | 624 | 42.8 | Plus |
Dpse\GA18604-PA | 617 | GA18604-PA | 211..597 | 205..598 | 464 | 30.4 | Plus |
Dpse\GA22870-PB | 1178 | GA22870-PB | 211..309 | 194..291 | 182 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17970-PA | 416 | GM17970-PA | 1..416 | 204..619 | 2263 | 100 | Plus |
Dsec\GM17969-PA | 189 | GM17969-PA | 1..187 | 1..187 | 990 | 98.4 | Plus |
Dsec\GM15548-PA | 689 | GM15548-PA | 21..502 | 69..570 | 891 | 39 | Plus |
Dsec\GM13419-PA | 1010 | GM13419-PA | 225..596 | 194..513 | 680 | 37.4 | Plus |
Dsec\GM25107-PA | 616 | GM25107-PA | 210..611 | 205..613 | 459 | 29.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22607-PA | 556 | GD22607-PA | 119..556 | 182..619 | 2392 | 100 | Plus |
Dsim\GD25052-PA | 761 | GD25052-PA | 93..574 | 69..570 | 883 | 38.8 | Plus |
Dsim\GD17273-PA | 1012 | GD17273-PA | 225..596 | 194..513 | 680 | 37.4 | Plus |
Dsim\GD22607-PA | 556 | GD22607-PA | 1..135 | 1..135 | 547 | 89.6 | Plus |
Dsim\GD14143-PA | 620 | GD14143-PA | 214..615 | 205..613 | 457 | 29.3 | Plus |
Dsim\GD20634-PA | 1973 | GD20634-PA | 1344..1546 | 318..508 | 350 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12474-PA | 623 | GJ12474-PA | 1..623 | 1..619 | 3044 | 94.6 | Plus |
Dvir\GJ19990-PA | 760 | GJ19990-PA | 92..573 | 69..570 | 893 | 39.4 | Plus |
Dvir\GJ18508-PA | 1150 | GJ18508-PA | 195..599 | 194..563 | 739 | 36.8 | Plus |
Dvir\GJ11690-PA | 611 | GJ11690-PA | 205..608 | 205..608 | 465 | 30.6 | Plus |
Dvir\GJ10154-PA | 1979 | GJ10154-PA | 1369..1652 | 331..563 | 366 | 31.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15399-PA | 620 | GK15399-PA | 1..620 | 1..619 | 3044 | 93.4 | Plus |
Dwil\GK23060-PA | 762 | GK23060-PA | 93..574 | 69..570 | 908 | 39.6 | Plus |
Dwil\GK25720-PA | 1287 | GK25720-PA | 368..631 | 295..563 | 618 | 42.4 | Plus |
Dwil\GK12345-PA | 623 | GK12345-PA | 211..614 | 200..610 | 471 | 29.7 | Plus |
Dwil\GK14310-PA | 2000 | GK14310-PA | 1375..1558 | 331..508 | 354 | 39.1 | Plus |
Dwil\GK25720-PA | 1287 | GK25720-PA | 199..297 | 194..291 | 179 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18955-PA | 619 | GE18955-PA | 1..619 | 1..619 | 3354 | 99.7 | Plus |
Dyak\GE11572-PA | 689 | GE11572-PA | 21..502 | 69..570 | 888 | 39 | Plus |
Dyak\GE11013-PA | 857 | GE11013-PA | 223..594 | 194..513 | 679 | 37.4 | Plus |
Dyak\GE20794-PA | 621 | GE20794-PA | 215..601 | 205..598 | 447 | 29.9 | Plus |
Dyak\GE10084-PA | 1973 | GE10084-PA | 1344..1546 | 318..508 | 350 | 36 | Plus |
Translation from 85 to 1944
> LD28822.hyp MDPSASLADKLASKTASSNSLDSSSKSSSLGSKHGGGENGILRDTPFGYL EGEEDQDQKNDVTYVCPYRGPVFGALTITNYRLYFRSLPLRDQEPPVVVD VPLGVIARVEKIGGATSRGENSYGIEIFCKDMRNLRFAHKQQNHSRRTVF EKLQANAFPLSYSGRLFAFAHAAANSVNGNGGWDGWAVYEPLAELRRLGV PNDMWRATKLNESYAICDSYPAVWAVPKAASDDFLRRVAQFRSRCRLPVL SWMNPRTQATITRCSQPLVGVSGKRNSDDEAYLSFIMEANAQSDKLTIMD ARPSANAIANKAKGGGYESEDAYKNVEINFLDIHNIHVMRESLRKVKEAC FPTTDDSKWQTAIDNTLWLKHIRCILAGAVRIVDKVETMSTSVVVHCSDG WDRTAQLTALSMLLLDPHYRTVRGFEVLIEKEWLSFGHKFQQRIGHGDNK HSDADRSPVFLQFIDSVWQVSQQFNNAFEFNEHFLITIVDHLYSCRFGTF LCNTEAERVAEDLKHKTTSLWTHINSSLDQYLNPLFPSFTHGAELVLRPI ASVRSVRLWKGLYCRWNPGLCAPQHGCQRTRELLSKQDQLFKLVNELRLK SNNRSNSMQTTTRLASPMH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mtm-PB | 619 | CG9115-PB | 1..619 | 1..619 | 3277 | 100 | Plus |
mtm-PA | 619 | CG9115-PA | 1..619 | 1..619 | 3277 | 100 | Plus |
CG3530-PC | 639 | CG3530-PC | 3..452 | 106..570 | 857 | 40.3 | Plus |
CG3530-PB | 689 | CG3530-PB | 53..502 | 106..570 | 857 | 40.3 | Plus |
CG3530-PA | 761 | CG3530-PA | 125..574 | 106..570 | 857 | 40.3 | Plus |