Clone LD28902 Report

Search the DGRC for LD28902

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:289
Well:2
Vector:pOT2
Associated Gene/Transcriptc11.1-RA
Protein status:LD28902.pep: gold
Preliminary Size:5867
Sequenced Size:5875

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12132 2001-01-01 Release 2 assignment
CG12132 2001-11-29 Blastp of sequenced clone
CG12132 2003-01-01 Sim4 clustering to Release 3
c11.1 2008-04-29 Release 5.5 accounting
c11.1 2008-08-15 Release 5.9 accounting
c11.1 2008-12-18 5.12 accounting

Clone Sequence Records

LD28902.complete Sequence

5875 bp (5875 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069558

> LD28902.complete
CCGTTTTAAACACAAACAATTTCGCAACGCAGTGAATCTCTTGTTTTTCC
GAGTTTTTCCGCGATCGCGAAGTGCGCGTTAAAGTTAATCGCTGTCTGAA
ATCCCGTTAAGCTGGAGAAGTGGAAGAGAACGCGCAATTCCACCAAGAAG
ATGGACGGCCGAGGGGTTGGCGGCGGTGGTAGTGGTGCTGCCACAGGGGG
AGGATCCGCCAACAACAAATCAGCTGCTGGAAATAGCGCCGCCACTGGAA
ATGCCGATGCATCTACCGCCACAGCGGCGCCCAATGATAAGCCAACGATT
CTGGAAGGCGTTCTCCACAACATCTTCGATGGGCTGATGGACAAGGAGGA
GCAGGTGCGGATTGCCATGCAGCAGGCGATCGTGAAGATCTTGGAGACCC
ATCCGGAACGGGCTGCGGAGATCCTCAGCGAACATCGATCGCAGCAGCCG
AAGATGACCGATCAAACAGTGGCCATGTTGTTGGACTGCATTCGTCGCGT
GGTGGGAGCGGAAACTCCTCTGCCGCCGGCTGCAAATCAGAAACTTATTG
ATCTTGCGCTGCAGGAGCTCACCAAGAATCCCGAGCATTTGCCACTCATA
CAGAATCCCGCCCAGCGCATCCTGGTAGCCATCGGACGGAGCAGCCCAGA
GAGTTGTGAGCAGGTAATGGAGGCGCTCCAGGAGAAGGGAACAAGTACAG
AAGGTGTGGCTCACTTTATGCTGATGCAGTGCCTCGGTCTGCTGGCCACT
GAGAATCCGGCAGGGGTTGTGCCCCACATAAAGGCCATATTGAGCCGTAG
TCAGCCGCATCTAGTCGGGATACGCCAGGATCACATCAAGCAGGCACATG
CCTATGCCATCGGTAGATTCAGTGAGGCTCTACTGGAGGAGAGCGGCAAA
AAGGAGGAGGAGAACTGCTCCACGGAGATCAGTGTGGCCTACGATGTGCT
CTTCAATCAATGGCTGCACTCCCGGGAGCCAAAGGTTTGCGTGGAGATAC
TGCAGGCCCTGTCCAGCATGTATCCACTGCTGCCCAAAGACCGGATTCAG
GATCAGGCCGCCCGATTGGTTCCCCAGATCCTGGCGCTCTATCGACGCAG
CGTGGACAGGAATGCCGTGACGCAGTTCCTCTGCTCCGTGTTGAAAACGA
ATCTGGCACTAAATGCCACAGTCTTGGATGGCATAATTGACGTGTTGGTC
ACCCATTTGTTCGACCTGGTCTGCGTTTATCCGGACTATGAGAAACCGCA
GACGGTGAAGGGTCACTACGAGGTGCTGCGTTGCTTCCACCTTCTGGCCG
GTCATCAACCCTACTCCACGCGCATTATGGACACCCTGCTGATCCACCTG
CGGAACAATAGCGAACGCGAGAGGATGAAGTCCCTGCTGATACTCACGCA
CCTACTCAACTCCTGTGCAGGGAATATAGAAAACCGGATTCCAGCCACCA
TTGAGTGCCTAAAGCAACTGATCCTCAGCGAAAGAGGGATCAAAATGAAG
CTAACGCTGCTAAAAACCATTGTGGCTCTCGCCCAAAAGTCCCACATCCG
GGACAAGGAGTTTGTGTGGTTCGTGGTGCGGCATAGTTGCCGATTCTCAA
AGCCAAGTCAGGAGCACGGCAGCCAGGAGGAGCACGCCAATTTGGTGCTG
AGCTGTGAGAACACCCTGTACATGCTGGCCTCTACGGTGGGCACCTTGGA
TGAGCTGCTCAAGAGGGAGCTGCTGAACTACTTGATCCTACTGGACTACA
CGGATATTTGCGGGAATCTCGCCAAGTGCCTGGCTAGTTTGTTTGCCAAA
TCTCCGCACATAGAGTACGATATTGCGGGAGACGATGCCGCCACGGAGCA
AGCCACACCGGAGAGTATGGGCGCTGCTGGCGAGGATCGCAGTGTGATCA
AGCGCGGAAAGGTTATGGTCCCTGGAGCCGAGACGATTTACGCAAGATGT
CTGGCACTCCTGGGCAATCAGCAGTGCATTAAACGATGCTCGAATATTCT
CAGTTTTCTGCGCTACTACCATCCTCAGGTGAATCCCGCCCTGGAGGAGC
TGTGGGAGCGAAAAATTCCCGATCTTCTGCTGCAAATCAACAGGGAGAGT
GCCTATCGCCAGCTACTCCACGATTTTGTGCTTGAAACGAATGAATTTCT
GGGCGGATTGGATGAGAACTTTGCCCAGCGGCTGGCCAGTAAGCTGGCGG
ACCAGATGTACTTGTATCCCATGCAACTGCCCCACTCCGAGTGGCATTTG
CCTGACCTTAGCGCCGAGCGAGGCATGCTCCTGCAGGCGGTGGCCCTCAC
CCTGCTTCAGGTGACCGATGTGGCCTGCATCCACACCAAGATCGATCTCA
TTGTGACGACTGCCAGGCAGGAAAGATTGGACAAGCACGTTAAGCATGCG
GACTACGAAAAGCGCATTGAACCCTGTGCCAGAGCCTTGGGCTACATTTC
CCGCCAACACTTGGGGCATCTGATCAAAAAGCTAACCGAACTGGCCCAAG
TCGGTGGGCGAAAGCACTCCACCGGTTTCTTTAGCAATCTGCACTTTATC
AAGGATACGCACAAGGAGCTAGAGAACTACAAGAGCAACCTGCTCGTGGT
CAAGGCTTTTGGTCGCATCATGGACGAAGCCGATCCGTTGCAATCCATTC
AACACCTGGACGAAGATGACACATTGCTGGGCTTCCTCATCCAACAGCTG
GCCGTGCACAAGGACCAAACAATTATGTCGGCGATCCTGCAGACGCTGCT
CAGCATCTGCAACCAGTTGATAGCCACCAAGGAGCAGCTGCCGGCTCCTC
TGCGTCATCGCAAGCAGATCATGGAGACGGTCTTCAACATCCCCATCGAG
GCGCCGTTCCACGACCTTCCCCTTCTGCCCACCATTCTCAAACTGGGCAC
GGACTTCATACGCATAGGTGGACCCGATACCGAGGAGTGTGTGGACGGCG
GGGTGATCTTCGAGATCGCGTGCCGCAACTTCTTCGGCTGTGCCCAGCAG
CTCAAGATGAAGTTCGACTCTCAGGAGGAGGATGAGCGCAACAGCTTCCT
GGCCAAGCACCTCAACGAATCGCTGCCGCAGTTGAATGCGCTTGTGAGGG
CCATCGTTGAACTGGACGCCTCGCCGGCCACACTGGATCTGATTATTGGC
ATTCTAGAGGGCTGGACAAGGGATCGCAACTCTGAGGTGCGAATCTGTGC
CAGCCATGTGTTTAACAACACCCTCGATGTCTACATCAAGTCCATGAAAA
TTGGCTGCGAGGCCCCGTCGAAGTTCAATCAGACTGGTCAAATGCTGGGC
AAGATTGTGCCCAGGTGCATCGATTCGAATGGCACGGTGCGGCAGGTGTC
CGTGGAGATCCTGCAGAAGACGCTGGAGATCGCGTGTATCTACGAAACCC
TGACGATAGCCAGCATCGACAGCACTGCCGACTGGCTGAAGGAGATCGAG
ACCATCAAGGAGCACATAATCACCGACGAGCCCAAGCAAATCTACAATCT
GGCCGGCGACATTGCCAAGATTATTGCACTGCGTATCTCCAGCTTTCAGT
ACCTGCAGTTCTGCAAAACTCTACTTCATTCGCTGCGTGATCCTGAGCAG
AGTTCCACCATTGGCGCCAGTGTTGTGCTCAAGTTCTTTATCCAGCAGAA
AGGCTCTGAGCTGTTCCACGCCATTCCCGACCTGGTTCGCGACAGTTTGC
TGGCCTTGCGCGTGTGCGAGGTGCCCAGGGCGAAGTCCGGAGTGCTAAAA
GCTTTGGTGGCCCTCACCAAGCACCATCCCAAGTTGGTGTGTGCCGAAAT
GCTGTCGCAGCCGCTGCCGTACGACCCCAATCTGGTGGAGTACTGGCACC
TGGTGTGCAACGACCCGGAGTTGACGGGCCTCACGCTGGACAACTTTCTG
CAGCTGCTAAGTGGTGCCTCCCTCCAGGAAGGCGGTCAGGATGCATCTCT
TTCCGAACGTCAGAAATTAGCCAGCGGCCAGCCGTTTGCCATTTTCTGCG
CTCTGCATGAGATGCTGCCGTGCAAGGATATCAAGGGGCAACTGGAAACA
AGGTTTGCGGACATGTTCTGCATGCTGCTCACTTCGCTAAGCAGCTACAC
CAACTTAGCTGCACCGAATCCTATAAACAATGCCTCTCTAAGTCCCAACC
AGACGCAATCGGGCAAAACCAAATTCGGTTTCGTGCCCAACAAGGAGCTG
ATCAAGCTCAATCCCTGCCAAATAGCACTGGAAACTTTCCAGGCCTTCCT
GACCAATCTAGAAATGGAGCAGATTGCCAGCGTGCTGACTGTGAATACGC
AACTGGCGAGCAGCGCGGACTGGCACAACTACATCGAATTGCTGACACCG
ATGGCCATCGGTCTAGGTCAACAGCTGCAGCTGGGAAGTCCGCAGATGAG
GCAACTGGTCAACTCGCTGAGCAAATATGTGGCTTCACCATACGATGGTC
AAAGAGTGGCCGCCGTGGGTATTTTCTCACGATTGGTGCCACTGAAACCC
ACCGGTGAGCTAGCTGCGTCCATACTGCTCCACCTCGGAGCCGCACTATC
CGATCCCAATGCGGTAGTGCGAGGTCTCAGCATCCAGGGCATGGGTTACG
TGGGCCAGTTGGGAGAAAAGGAGGCGAAGCGCTACTCGGAAACTGCCATC
GGTGCTCTGTTGAAGGGAGTCGACGATCCGGTGGGCGATTGCCTAATCAA
CATTCCGCTGGAGAGCATGCGCGGCCTGTCTGGAATACTGCGAGCATTGC
CCAGCGAGCGGGTAGAGCCCTTCCACGTCTCCCTCGCCATCCGGATTCGA
CCGTTTCTCGGCAACTATGCACTAGAGATGCGAGAGGCGGCTATCCAACT
GTTTGGCGATATATGCGAGGGCAAGCACGATGACGGCAGCAGTTCACCCA
CATCCTCGATGGAGGCACTGAGAGAGCAGCTCATCGCCAATCTCTTCCCG
CTGCTACTGCATCTCAGCGAGAGCGAAGTGGCTATTGCCTCGGCCTGTCG
TGGAACACTTCAGCGGGTTTGTCGTCTCCTGACAGCTCCAAGGGTCGTGG
AGATGGCGGAGCAGCAGTTGGGCGAGGAACGAGGTCACCAGCTCAACTAC
AGCAGCTTTGTGCTGGAATTTGTCAAGACAATTGCACTGGAGCTGACGGA
TCACATCCAGGACTTCATCGATTCGTGCCTGCCGCAGTTGCGTAGTCAGT
GGCCCGAGGTGCGAGGTAGTGCAGCCATTGTAATTGGCATTCTGCACAAC
TTCCTCAGCGAGAGAAACGTCCAAACGGAGACTGTGGCCAGCAAGATTGC
CGTGCTGCTCAAGGACGAACAGGCGCTGGTGCGGATGAGGGCAGCCACTG
CTCTGGGTTACTTCTTTGGGGACATCTAGAGCATCCAAGGGACCAACTCG
ATTAATTAGATGTGCAGTTATGTTGTGTGTGTTTGTAAATTATGACTTAG
TATTGCTCCAAGTGTGATCCCTTTGCCTCAGCAATCGTTCCCTTATTATG
TTTGATATTTAACTCTTTGTTTTGTTATGTAATCGAAAGTCACGTTATAT
ACTATCTGTATACACATAGCATTATTTATATATTTATATTTCCATGTTAA
TGCGGAGCGTTTTGCAGCTTTAAGACAGTTGGAAGTTATAGGAACTCGTA
TTCGACCGAAGACTTTGTTACGGACAATAATTACTTCATATTATACTGAG
TCTATTCAAAATTACCTTGGCTTTTTGAGGTTCATAAAAATTAAAGAAAA
AAATAACTACTATGATTCCACAGCAAAAATACGTTGTCAAAAATTGATTG
TATTCCATTAAGGAAGTGGTATTTTATTAAAAATATTAATAAATCCTTAT
AAGCGTAAAAAAAAAAAAAAAAAAA

LD28902.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:45:47
Subject Length Description Subject Range Query Range Score Percent Strand
c11_1-RA 5979 c11_1-RA 55..5912 1..5858 29290 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 19:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 9170764..9173197 2919..486 12125 99.9 Minus
chrX 22417052 chrX 9168303..9169196 5134..4241 4440 99.8 Minus
chrX 22417052 chrX 9170062..9170710 3563..2915 3230 99.8 Minus
chrX 22417052 chrX 9167458..9168078 5856..5236 3090 99.8 Minus
chrX 22417052 chrX 9169525..9170000 4038..3563 2380 100 Minus
chrX 22417052 chrX 9174602..9174909 308..1 1540 100 Minus
chrX 22417052 chrX 9169258..9169463 4243..4038 1030 100 Minus
chrX 22417052 chrX 9173261..9173440 485..306 900 100 Minus
chrX 22417052 chrX 9168138..9168241 5237..5134 520 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:21:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 19:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9278954..9281387 2919..486 12170 100 Minus
X 23542271 X 9276493..9277386 5134..4241 4470 100 Minus
X 23542271 X 9278252..9278900 3563..2915 3245 100 Minus
X 23542271 X 9275646..9276268 5858..5236 3115 100 Minus
X 23542271 X 9277715..9278190 4038..3563 2380 100 Minus
X 23542271 X 9282792..9283099 308..1 1540 100 Minus
X 23542271 X 9277448..9277653 4243..4038 1030 100 Minus
X 23542271 X 9281451..9281630 485..306 900 100 Minus
X 23542271 X 9276328..9276431 5237..5134 520 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:33:46
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 9287052..9289485 2919..486 12170 100 Minus
X 23527363 X 9284591..9285484 5134..4241 4470 100 Minus
X 23527363 X 9286350..9286998 3563..2915 3245 100 Minus
X 23527363 X 9283744..9284366 5858..5236 3115 100 Minus
X 23527363 X 9285813..9286288 4038..3563 2380 100 Minus
X 23527363 X 9290890..9291197 308..1 1540 100 Minus
X 23527363 X 9285546..9285751 4243..4038 1030 100 Minus
X 23527363 X 9289549..9289728 485..306 900 100 Minus
X 23527363 X 9284426..9284529 5237..5134 520 100 Minus
Blast to na_te.dros performed on 2019-03-15 19:31:58 has no hits.

LD28902.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 19:32:56 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 9173261..9173438 308..485 100 <- Minus
chrX 9170766..9173197 486..2917 99 <- Minus
chrX 9174603..9174909 1..307 100   Minus
chrX 9167458..9168077 5237..5856 92 <- Minus
chrX 9168139..9168241 5134..5236 100 <- Minus
chrX 9168304..9169194 4243..5133 99 <- Minus
chrX 9169259..9169462 4039..4242 100 <- Minus
chrX 9169525..9169999 3564..4038 100 <- Minus
chrX 9170062..9170707 2918..3563 99 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:08:45 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 1..5229 151..5379 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:42:55 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 1..5229 151..5379 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 04:58:40 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 1..5229 151..5379 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:17:11 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 1..5229 151..5379 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:02:27 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 1..5229 151..5379 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:45:09 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 1..5854 1..5854 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:42:54 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 1..5854 1..5854 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:58:40 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 19..5874 1..5856 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:17:12 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 1..5854 1..5854 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:02:27 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
c11.1-RA 19..5874 1..5856 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:32:56 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
X 9275648..9276267 5237..5856 100 <- Minus
X 9276329..9276431 5134..5236 100 <- Minus
X 9276494..9277384 4243..5133 100 <- Minus
X 9277449..9277652 4039..4242 100 <- Minus
X 9277715..9278189 3564..4038 100 <- Minus
X 9278252..9278897 2918..3563 100 <- Minus
X 9278956..9281387 486..2917 100 <- Minus
X 9281451..9281628 308..485 100 <- Minus
X 9282793..9283099 1..307 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:32:56 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
X 9275648..9276267 5237..5856 100 <- Minus
X 9276329..9276431 5134..5236 100 <- Minus
X 9276494..9277384 4243..5133 100 <- Minus
X 9277449..9277652 4039..4242 100 <- Minus
X 9277715..9278189 3564..4038 100 <- Minus
X 9278252..9278897 2918..3563 100 <- Minus
X 9278956..9281387 486..2917 100 <- Minus
X 9281451..9281628 308..485 100 <- Minus
X 9282793..9283099 1..307 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 19:32:56 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
X 9275648..9276267 5237..5856 100 <- Minus
X 9276329..9276431 5134..5236 100 <- Minus
X 9276494..9277384 4243..5133 100 <- Minus
X 9277449..9277652 4039..4242 100 <- Minus
X 9277715..9278189 3564..4038 100 <- Minus
X 9278252..9278897 2918..3563 100 <- Minus
X 9278956..9281387 486..2917 100 <- Minus
X 9281451..9281628 308..485 100 <- Minus
X 9282793..9283099 1..307 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:58:40 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9169681..9170300 5237..5856 100 <- Minus
arm_X 9170362..9170464 5134..5236 100 <- Minus
arm_X 9170527..9171417 4243..5133 100 <- Minus
arm_X 9171482..9171685 4039..4242 100 <- Minus
arm_X 9171748..9172222 3564..4038 100 <- Minus
arm_X 9172285..9172930 2918..3563 100 <- Minus
arm_X 9172989..9175420 486..2917 100 <- Minus
arm_X 9175484..9175661 308..485 100 <- Minus
arm_X 9176826..9177132 1..307 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:07:23 Download gff for LD28902.complete
Subject Subject Range Query Range Percent Splice Strand
X 9283746..9284365 5237..5856 100 <- Minus
X 9284427..9284529 5134..5236 100 <- Minus
X 9284592..9285482 4243..5133 100 <- Minus
X 9285547..9285750 4039..4242 100 <- Minus
X 9285813..9286287 3564..4038 100 <- Minus
X 9286350..9286995 2918..3563 100 <- Minus
X 9287054..9289485 486..2917 100 <- Minus
X 9289549..9289726 308..485 100 <- Minus
X 9290891..9291197 1..307 100   Minus

LD28902.pep Sequence

Translation from 150 to 5378

> LD28902.pep
MDGRGVGGGGSGAATGGGSANNKSAAGNSAATGNADASTATAAPNDKPTI
LEGVLHNIFDGLMDKEEQVRIAMQQAIVKILETHPERAAEILSEHRSQQP
KMTDQTVAMLLDCIRRVVGAETPLPPAANQKLIDLALQELTKNPEHLPLI
QNPAQRILVAIGRSSPESCEQVMEALQEKGTSTEGVAHFMLMQCLGLLAT
ENPAGVVPHIKAILSRSQPHLVGIRQDHIKQAHAYAIGRFSEALLEESGK
KEEENCSTEISVAYDVLFNQWLHSREPKVCVEILQALSSMYPLLPKDRIQ
DQAARLVPQILALYRRSVDRNAVTQFLCSVLKTNLALNATVLDGIIDVLV
THLFDLVCVYPDYEKPQTVKGHYEVLRCFHLLAGHQPYSTRIMDTLLIHL
RNNSERERMKSLLILTHLLNSCAGNIENRIPATIECLKQLILSERGIKMK
LTLLKTIVALAQKSHIRDKEFVWFVVRHSCRFSKPSQEHGSQEEHANLVL
SCENTLYMLASTVGTLDELLKRELLNYLILLDYTDICGNLAKCLASLFAK
SPHIEYDIAGDDAATEQATPESMGAAGEDRSVIKRGKVMVPGAETIYARC
LALLGNQQCIKRCSNILSFLRYYHPQVNPALEELWERKIPDLLLQINRES
AYRQLLHDFVLETNEFLGGLDENFAQRLASKLADQMYLYPMQLPHSEWHL
PDLSAERGMLLQAVALTLLQVTDVACIHTKIDLIVTTARQERLDKHVKHA
DYEKRIEPCARALGYISRQHLGHLIKKLTELAQVGGRKHSTGFFSNLHFI
KDTHKELENYKSNLLVVKAFGRIMDEADPLQSIQHLDEDDTLLGFLIQQL
AVHKDQTIMSAILQTLLSICNQLIATKEQLPAPLRHRKQIMETVFNIPIE
APFHDLPLLPTILKLGTDFIRIGGPDTEECVDGGVIFEIACRNFFGCAQQ
LKMKFDSQEEDERNSFLAKHLNESLPQLNALVRAIVELDASPATLDLIIG
ILEGWTRDRNSEVRICASHVFNNTLDVYIKSMKIGCEAPSKFNQTGQMLG
KIVPRCIDSNGTVRQVSVEILQKTLEIACIYETLTIASIDSTADWLKEIE
TIKEHIITDEPKQIYNLAGDIAKIIALRISSFQYLQFCKTLLHSLRDPEQ
SSTIGASVVLKFFIQQKGSELFHAIPDLVRDSLLALRVCEVPRAKSGVLK
ALVALTKHHPKLVCAEMLSQPLPYDPNLVEYWHLVCNDPELTGLTLDNFL
QLLSGASLQEGGQDASLSERQKLASGQPFAIFCALHEMLPCKDIKGQLET
RFADMFCMLLTSLSSYTNLAAPNPINNASLSPNQTQSGKTKFGFVPNKEL
IKLNPCQIALETFQAFLTNLEMEQIASVLTVNTQLASSADWHNYIELLTP
MAIGLGQQLQLGSPQMRQLVNSLSKYVASPYDGQRVAAVGIFSRLVPLKP
TGELAASILLHLGAALSDPNAVVRGLSIQGMGYVGQLGEKEAKRYSETAI
GALLKGVDDPVGDCLINIPLESMRGLSGILRALPSERVEPFHVSLAIRIR
PFLGNYALEMREAAIQLFGDICEGKHDDGSSSPTSSMEALREQLIANLFP
LLLHLSESEVAIASACRGTLQRVCRLLTAPRVVEMAEQQLGEERGHQLNY
SSFVLEFVKTIALELTDHIQDFIDSCLPQLRSQWPEVRGSAAIVIGILHN
FLSERNVQTETVASKIAVLLKDEQALVRMRAATALGYFFGDI*

LD28902.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:10:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19226-PA 1742 GF19226-PA 43..1742 44..1742 8298 90.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:10:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18984-PA 1744 GG18984-PA 1..1744 1..1742 9052 97.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:10:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12883-PA 1732 GH12883-PA 9..1732 37..1742 7139 78.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:10:15
Subject Length Description Subject Range Query Range Score Percent Strand
c11.1-PB 1742 CG12132-PB 1..1742 1..1742 8894 100 Plus
c11.1-PA 1742 CG12132-PA 1..1742 1..1742 8894 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:10:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14437-PA 1727 GI14437-PA 27..1727 46..1742 7192 80.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:10:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16511-PA 1332 GL16511-PA 1..1114 1..1100 4765 81.3 Plus
Dper\GL16511-PA 1332 GL16511-PA 1083..1319 1365..1600 1051 86.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:10:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11427-PA 1758 GA11427-PA 1..1758 1..1742 7896 84.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:10:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22241-PA 1709 GM22241-PA 11..1709 44..1742 8908 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:10:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16068-PA 438 GD16068-PA 1..438 1305..1742 2293 98.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:10:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18774-PA 1724 GJ18774-PA 10..1724 37..1742 7275 80.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:10:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25557-PA 1741 GK25557-PA 27..1741 46..1742 7118 79.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:10:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15457-PA 1744 GE15457-PA 1..1744 1..1742 9082 97.2 Plus

LD28902.hyp Sequence

Translation from 150 to 5378

> LD28902.hyp
MDGRGVGGGGSGAATGGGSANNKSAAGNSAATGNADASTATAAPNDKPTI
LEGVLHNIFDGLMDKEEQVRIAMQQAIVKILETHPERAAEILSEHRSQQP
KMTDQTVAMLLDCIRRVVGAETPLPPAANQKLIDLALQELTKNPEHLPLI
QNPAQRILVAIGRSSPESCEQVMEALQEKGTSTEGVAHFMLMQCLGLLAT
ENPAGVVPHIKAILSRSQPHLVGIRQDHIKQAHAYAIGRFSEALLEESGK
KEEENCSTEISVAYDVLFNQWLHSREPKVCVEILQALSSMYPLLPKDRIQ
DQAARLVPQILALYRRSVDRNAVTQFLCSVLKTNLALNATVLDGIIDVLV
THLFDLVCVYPDYEKPQTVKGHYEVLRCFHLLAGHQPYSTRIMDTLLIHL
RNNSERERMKSLLILTHLLNSCAGNIENRIPATIECLKQLILSERGIKMK
LTLLKTIVALAQKSHIRDKEFVWFVVRHSCRFSKPSQEHGSQEEHANLVL
SCENTLYMLASTVGTLDELLKRELLNYLILLDYTDICGNLAKCLASLFAK
SPHIEYDIAGDDAATEQATPESMGAAGEDRSVIKRGKVMVPGAETIYARC
LALLGNQQCIKRCSNILSFLRYYHPQVNPALEELWERKIPDLLLQINRES
AYRQLLHDFVLETNEFLGGLDENFAQRLASKLADQMYLYPMQLPHSEWHL
PDLSAERGMLLQAVALTLLQVTDVACIHTKIDLIVTTARQERLDKHVKHA
DYEKRIEPCARALGYISRQHLGHLIKKLTELAQVGGRKHSTGFFSNLHFI
KDTHKELENYKSNLLVVKAFGRIMDEADPLQSIQHLDEDDTLLGFLIQQL
AVHKDQTIMSAILQTLLSICNQLIATKEQLPAPLRHRKQIMETVFNIPIE
APFHDLPLLPTILKLGTDFIRIGGPDTEECVDGGVIFEIACRNFFGCAQQ
LKMKFDSQEEDERNSFLAKHLNESLPQLNALVRAIVELDASPATLDLIIG
ILEGWTRDRNSEVRICASHVFNNTLDVYIKSMKIGCEAPSKFNQTGQMLG
KIVPRCIDSNGTVRQVSVEILQKTLEIACIYETLTIASIDSTADWLKEIE
TIKEHIITDEPKQIYNLAGDIAKIIALRISSFQYLQFCKTLLHSLRDPEQ
SSTIGASVVLKFFIQQKGSELFHAIPDLVRDSLLALRVCEVPRAKSGVLK
ALVALTKHHPKLVCAEMLSQPLPYDPNLVEYWHLVCNDPELTGLTLDNFL
QLLSGASLQEGGQDASLSERQKLASGQPFAIFCALHEMLPCKDIKGQLET
RFADMFCMLLTSLSSYTNLAAPNPINNASLSPNQTQSGKTKFGFVPNKEL
IKLNPCQIALETFQAFLTNLEMEQIASVLTVNTQLASSADWHNYIELLTP
MAIGLGQQLQLGSPQMRQLVNSLSKYVASPYDGQRVAAVGIFSRLVPLKP
TGELAASILLHLGAALSDPNAVVRGLSIQGMGYVGQLGEKEAKRYSETAI
GALLKGVDDPVGDCLINIPLESMRGLSGILRALPSERVEPFHVSLAIRIR
PFLGNYALEMREAAIQLFGDICEGKHDDGSSSPTSSMEALREQLIANLFP
LLLHLSESEVAIASACRGTLQRVCRLLTAPRVVEMAEQQLGEERGHQLNY
SSFVLEFVKTIALELTDHIQDFIDSCLPQLRSQWPEVRGSAAIVIGILHN
FLSERNVQTETVASKIAVLLKDEQALVRMRAATALGYFFGDI*

LD28902.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:33:44
Subject Length Description Subject Range Query Range Score Percent Strand
c11.1-PB 1742 CG12132-PB 1..1742 1..1742 8894 100 Plus
c11.1-PA 1742 CG12132-PA 1..1742 1..1742 8894 100 Plus