BDGP Sequence Production Resources |
Search the DGRC for LD28985
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 289 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8386-RA |
Protein status: | LD28985.pep: gold |
Preliminary Size: | 839 |
Sequenced Size: | 639 |
Gene | Date | Evidence |
---|---|---|
CG8386 | 2001-01-01 | Release 2 assignment |
CG8386 | 2001-10-10 | Blastp of sequenced clone |
CG8386 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8386 | 2008-04-29 | Release 5.5 accounting |
CG8386 | 2008-08-15 | Release 5.9 accounting |
CG8386 | 2008-12-18 | 5.12 accounting |
639 bp (639 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061366
> LD28985.complete TGTCAAGCGAAGGCTTTTGTTTTCGTTCCGCATTTTCCTTACTTTTGGCT ATTTTCCGGACGAGATGGTGGACGACAGCACTCGAAAAACGTTGAGCAAC ATTCCGCTGCTGCAGATTCGCGCTGGTCCGCGCGAAAAGGATGTGTGGGT GCAGCGGCTCAAGGAGGAGTACCAGGCACTAATTAAGTATGTGGAGAACA ACAAACAGTCCGGCAGCGACTGGTTCCGTCTGGAATCCAACAAGGAGGGC ACCAAGTGGTTCGGAAAGTGTTGGTACATGCACAACCTGTTAAAGTACGA GTTCGACGTGGAGTTCGACATTCCAGTGACGTACCCAACCACCGCGCCCG AGATTGCCCTGCCAGAACTTGACGGCAAGACAGCGAAGATGTACCGTGGT GGCAAGATCTGTCTGACGGATCACTTTAAGCCACTGTGGGCACGCAATGT TCCCAAGTTTGGGATCGCCCACGCTATGGCTCTGGGTCTTGCTCCCTGGC TGGCCGTGGAGATTCCGGATCTCATCGAGAAGGGAATCATTACGTACAAG GAAAAGTAGCTAACTCAACTAGATAAAATTACTGGCAACAAAACAATGAA CAAAGTTTGATACGAAAGTCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8386-RA | 791 | CG8386-RA | 162..783 | 1..622 | 3110 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 11894356..11894657 | 487..186 | 1510 | 100 | Minus |
chr2R | 21145070 | chr2R | 11894714..11894900 | 187..1 | 935 | 100 | Minus |
chr2R | 21145070 | chr2R | 11894162..11894294 | 620..488 | 665 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16007087..16007388 | 487..186 | 1510 | 100 | Minus |
2R | 25286936 | 2R | 16007445..16007631 | 187..1 | 935 | 100 | Minus |
2R | 25286936 | 2R | 16006891..16007025 | 622..488 | 675 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16008286..16008587 | 487..186 | 1510 | 100 | Minus |
2R | 25260384 | 2R | 16008644..16008830 | 187..1 | 935 | 100 | Minus |
2R | 25260384 | 2R | 16008090..16008224 | 622..488 | 675 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsil\Loa | 7779 | Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). | 5679..5735 | 58..114 | 114 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 11894162..11894294 | 488..620 | 100 | <- | Minus |
chr2R | 11894356..11894655 | 188..487 | 100 | <- | Minus |
chr2R | 11894714..11894900 | 1..187 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 1..495 | 65..559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 1..495 | 65..559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 1..495 | 65..559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 1..495 | 65..559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 1..495 | 65..559 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 25..644 | 1..620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 25..644 | 1..620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 37..656 | 1..620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 25..644 | 1..620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8386-RA | 37..656 | 1..620 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16006893..16007025 | 488..620 | 100 | <- | Minus |
2R | 16007087..16007386 | 188..487 | 100 | <- | Minus |
2R | 16007445..16007631 | 1..187 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16006893..16007025 | 488..620 | 100 | <- | Minus |
2R | 16007087..16007386 | 188..487 | 100 | <- | Minus |
2R | 16007445..16007631 | 1..187 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16006893..16007025 | 488..620 | 100 | <- | Minus |
2R | 16007087..16007386 | 188..487 | 100 | <- | Minus |
2R | 16007445..16007631 | 1..187 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 11894398..11894530 | 488..620 | 100 | <- | Minus |
arm_2R | 11894592..11894891 | 188..487 | 100 | <- | Minus |
arm_2R | 11894950..11895136 | 1..187 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16008286..16008585 | 188..487 | 100 | <- | Minus |
2R | 16008644..16008830 | 1..187 | 100 | Minus | |
2R | 16008092..16008224 | 488..620 | 100 | <- | Minus |
Translation from 0 to 558
> LD28985.hyp VKRRLLFSFRIFLTFGYFPDEMVDDSTRKTLSNIPLLQIRAGPREKDVWV QRLKEEYQALIKYVENNKQSGSDWFRLESNKEGTKWFGKCWYMHNLLKYE FDVEFDIPVTYPTTAPEIALPELDGKTAKMYRGGKICLTDHFKPLWARNV PKFGIAHAMALGLAPWLAVEIPDLIEKGIITYKEK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8386-PA | 164 | CG8386-PA | 1..164 | 22..185 | 887 | 100 | Plus |
Translation from 64 to 558
> LD28985.pep MVDDSTRKTLSNIPLLQIRAGPREKDVWVQRLKEEYQALIKYVENNKQSG SDWFRLESNKEGTKWFGKCWYMHNLLKYEFDVEFDIPVTYPTTAPEIALP ELDGKTAKMYRGGKICLTDHFKPLWARNVPKFGIAHAMALGLAPWLAVEI PDLIEKGIITYKEK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13328-PA | 164 | GF13328-PA | 1..164 | 1..164 | 864 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22310-PA | 164 | GG22310-PA | 1..164 | 1..164 | 876 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19828-PA | 168 | GH19828-PA | 1..166 | 1..163 | 842 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ufc1-PA | 164 | CG8386-PA | 1..164 | 1..164 | 887 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20416-PA | 165 | GI20416-PA | 1..163 | 1..163 | 866 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10211-PA | 164 | GL10211-PA | 1..164 | 1..164 | 860 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21037-PA | 164 | GA21037-PA | 1..164 | 1..164 | 860 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20100-PA | 164 | GM20100-PA | 1..164 | 1..164 | 872 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25576-PA | 164 | GD25576-PA | 1..164 | 1..164 | 872 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20088-PA | 165 | GJ20088-PA | 1..163 | 1..163 | 865 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10642-PA | 164 | GK10642-PA | 1..164 | 1..164 | 857 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14107-PA | 164 | GE14107-PA | 1..164 | 1..164 | 876 | 100 | Plus |