Clone LD28993 Report

Gene	Date	Evidence
CG2890	2001-01-01	Release 2 assignment
CG2890	2001-07-04	Blastp of sequenced clone
CG2890	2003-01-01	Sim4 clustering to Release 3
PPP4R2r	2008-04-29	Release 5.5 accounting
PPP4R2r	2008-08-15	Release 5.9 accounting
PPP4R2r	2008-12-18	5.12 accounting

Clone Sequence Records

LD28993.complete Sequence

2440 bp (2440 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051757

> LD28993.complete
ATCACTCTCAATATTAATTGATAAGCAAAAAATTGAGCAAGTTCTCGCAT
AAACTTTGCAATCGGAAAAGCGTAGTTGTGATAAAAACAAGTAGAATAAC
AAAAACAAAAAAACAACAAACAAAAAAACTTTCCCCTCCGCTCAGCGATC
GCCTAAATGGTCACCATGGAAAACAGCGACGAGATAATGCAGATCCTAGA
GCGCTTTACGGATCTTAAACAAAAGGAGATCCCAAAGGAGCTGGAGGAGT
ACCTACAGTATGTGGCCAAGACCGGCGACACCATCTTCAAGTGGTCCAGC
CTGAAGTACTTGTTCCGCGAGAAGCTGCTCAGCGTGATCAAGCACTTTAA
TGAGGATTCGCCGCGTTTGGAGGAGATTCCCAACTATCCGAATGTGGACC
CTTTCAACTACGAGACCATGAAGTCCTCGTTGCTGGAGCGCTTGGACCTT
TTCAATGCAGCTCCTTTTACCGTGCAGCGGTTGTGCGAGCTACTAATCGA
TCCTCGGAAGCAGTACTCGCGCATCGATAAGTTTATGCGTGCTTTGGAAA
AGAATATTTTAGTGGTTAGCACAATCGATCCTGGACGCAAGCGTACCGAA
AGTGAGAATGGCGACTCGCTGGACTCAGTGGTCAACGGGGACCTCTCCAT
GGAGGTGAACATTGACATTGAAATGGAGAATAATAACGGTAACGCCGATG
AGGGCTCATCTCCCGGCGCCGGTTCGGCAGGTTGTGCCCAGAAGGCAAGC
TGCCCGCGTTCGGACGACAATGATCAGCCCAAGGCCAAGAAGGCAAAACT
GGAGATCGATGGTGAAGAGCGTTCGGAAGCGAGCGATGAAACGGACACAG
AAGTGGCAACCAGGGTCAAAAATGAAAAGGATGAGAAGAATGACAACGAT
GAGACTGATTCGCCGCATGAGGCTGCCGAGATCGAGGAGCCCGATGAAGA
GGTGGATGAGGCTGATCAGGAGACCAAGACCACCAAGCAGCCTGCTTACG
GCAGTCAGAAGGAGGGCGAGCAGGAGGAAAGTTTCCCATCATCTGCCGAT
GACGAGGCGGAGGACCCAATGGTGAGCAAATCCATAGAAGCTGAGAAAGA
ACTTGTTGCTCAGGAAAAGAAGAGGGAGGAGGACAAAAAGGTGGCAATCG
AGCCAAAAGAAGAGATTGTAAAGAAGGAAGAGGTCGTCGAGTCTGATAAA
CCGGACGGAAAGGTGGCACAGTTAGGCGACAAGGCAGTTGTCAAGAAATC
TACACCGCCTGCCGATGGGGAAAACCAGGAGCCTGTCAAAGTCAAGGCAG
AAAACGAAAAGGAGGAGAAAAAACATGCACCAATTAAAACTGAAAAGCAG
GACGATATCGACTCTACTGAGACTGACGATGCCCCATCAGCAGAAAAACC
CGCTGAAGAAAAGATAGCTTCCTCCGAATCGAAACCGAAGACCAAATCTG
AGGACGATCCAGAGGCCGAGACCAAGAAGAGCCAACCGGAAAAGACTGAA
ACTGAGGCGGCCGAGAAGTCGGTTTCGGATGAAAAGCAGGCTGCCGAGCC
GAATGCAGAAAGCGAGAATAGGAACGACTTGACCACTTCCAAAGCGACCG
AGGCAGCCCAGGAGTCAGTCGAGAAGTCGCCGGTTGAGGATGCTTCTAGT
CCTGCTGTGGAAGATCTGGCAGCTGCAACCACACCGCAATCTCCTTTGGG
CGCTGCCGATTCCGCTGCTGAGACGCCGCCTGCTGAGACAGGCGATGACT
CGCAGGCTTCGCCCTTGGTCGCCGCTGTAACTCCGCCTGTCTTGGCCCTC
AACGACCAGCCCATGGAGGATACTCCAGCCGAGGAGGAGGCACGCGTCTC
GCCGTCGGCCACCGTCGAGGAGGTGGTAATGGCCGAAAGCGCCAATGCCG
GCGCAATGGCCACCGAAGAGGCCGCCAAGGACGATCCGGCCGCCATGGAG
ATCGATGACACCAGCCAGGAGGTGATGATGCAGTAGATTGGGCCCATTCA
GGAGCCGTAAACACCTTTATTTAACTACTACTCCATATAACTAGTATTTT
AAGACAAAAGCCGCAAATAATGTAGATGTAATCCTGCCCTGCTTTCCCTT
TTATATCCCAACAGATCCCAATACTTTCCAATAAGGCAAGCAGTGGTAGC
TCCCCCTTCGTAGCCGTAAGTCGCAGCCCGGACACGATCCAACACTAGAC
TCTGTTGGCGGTTCGGTGTTTCATGCTCTGTGGCCTCCCCTTTTGTTTTG
TATTTATGTTGTGCTGTCCACCCCCTTGCGAATGACAATTTTGAGTATCT
CAACCCCCTCGCCACTGTTCCCAAATTTTTTTAAATAATCTAGTTTTAGA
CGCTGTCCGTGGCACGAACTTCGGCAAGCTGTGAGCGCGATTAAACACAG
AATAAACACTACTCGTAATAACAAAAAAAAAAAAAAAAAA

LD28993.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:59:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
PPP4R2r-RA	2507	PPP4R2r-RA	41..2464	1..2423	12080	99.9	Plus
PPP4R2r.a	2483	PPP4R2r.a	189..2483	129..2423	11475	100	Plus
PPP4R2r.b	2462	PPP4R2r.b	412..2462	373..2423	10255	100	Plus
PPP4R2r.b	2462	PPP4R2r.b	138..369	146..377	1145	99.5	Plus
PPP4R2r.a	2483	PPP4R2r.a	9..136	1..128	640	100	Plus
PPP4R2r.b	2462	PPP4R2r.b	9..136	1..128	640	100	Plus

Blast to d_melanogaster_OreR.fa performed 2019-03-16 02:24:45

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
chrX	22417052	chrX	10371580..10373441	561..2422	9310	100	Plus
chrX	22417052	chrX	10370971..10371215	129..373	1225	100	Plus
chrX	22417052	chrX	10371333..10371522	373..562	935	99.5	Plus
chrX	22417052	chrX	10370339..10370466	1..128	640	100	Plus

Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:21:45 has no hits.

Blast to na_all.dmel.RELEASE6 performed 2019-03-16 02:24:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23542271	X	10480082..10481944	561..2423	9315	100	Plus
X	23542271	X	10479473..10479717	129..373	1225	100	Plus
X	23542271	X	10479835..10480024	373..562	950	100	Plus
X	23542271	X	10478841..10478968	1..128	640	100	Plus

Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:18:35

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
X	23527363	X	10488180..10490042	561..2423	9315	100	Plus
X	23527363	X	10487571..10487815	129..373	1225	100	Plus
X	23527363	X	10487933..10488122	373..562	950	100	Plus
X	23527363	X	10486939..10487066	1..128	640	100	Plus

Blast to na_te.dros performed 2019-03-16 02:24:43

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
TAHRE	10463	TAHRE OSV 10463bp	9659..9702	1881..1922	115	79.5	Plus

LD28993.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 02:25:32 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
chrX	10370339..10370467	1..128	99	->	Plus
chrX	10370971..10371215	129..373	100	->	Plus
chrX	10371334..10371522	374..562	99	->	Plus
chrX	10371582..10373441	563..2422	100		Plus

Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:08:56 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RC	1..1830	157..1986	100		Plus

Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:59:29 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RC	1..1830	157..1986	100		Plus

Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:36:14 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RA	1..1830	157..1986	100		Plus

Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:43:10 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RC	1..1830	157..1986	100		Plus

Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:09:28 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RA	1..1830	157..1986	100		Plus

Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:14:37 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RA	9..2431	1..2422	99		Plus

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:59:29 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RA	9..2431	1..2422	99		Plus

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:36:14 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RA	4..2426	1..2422	99		Plus

Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:43:11 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RA	9..2431	1..2422	99		Plus

Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:09:28 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
PPP4R2r-RA	4..2426	1..2422	99		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:32 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10478841..10478969	1..128	99	->	Plus
X	10479473..10479717	129..373	100	->	Plus
X	10479836..10480024	374..562	100	->	Plus
X	10480084..10481943	563..2422	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:32 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10478841..10478969	1..128	99	->	Plus
X	10479473..10479717	129..373	100	->	Plus
X	10479836..10480024	374..562	100	->	Plus
X	10480084..10481943	563..2422	100		Plus

Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 02:25:32 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10478841..10478969	1..128	99	->	Plus
X	10479473..10479717	129..373	100	->	Plus
X	10479836..10480024	374..562	100	->	Plus
X	10480084..10481943	563..2422	100		Plus

Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:36:14 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
arm_X	10373869..10374057	374..562	100	->	Plus
arm_X	10372874..10373002	1..128	99	->	Plus
arm_X	10373506..10373750	129..373	100	->	Plus
arm_X	10374117..10375976	563..2422	100		Plus

Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:26:11 Download gff for LD28993.complete

Subject	Subject Range	Query Range	Percent	Splice	Strand
X	10487571..10487815	129..373	100	->	Plus
X	10487934..10488122	374..562	100	->	Plus
X	10488182..10490041	563..2422	100		Plus
X	10486939..10487067	1..128	99	->	Plus

LD28993.pep Sequence

Translation from 156 to 1985

> LD28993.pep
MVTMENSDEIMQILERFTDLKQKEIPKELEEYLQYVAKTGDTIFKWSSLK
YLFREKLLSVIKHFNEDSPRLEEIPNYPNVDPFNYETMKSSLLERLDLFN
AAPFTVQRLCELLIDPRKQYSRIDKFMRALEKNILVVSTIDPGRKRTESE
NGDSLDSVVNGDLSMEVNIDIEMENNNGNADEGSSPGAGSAGCAQKASCP
RSDDNDQPKAKKAKLEIDGEERSEASDETDTEVATRVKNEKDEKNDNDET
DSPHEAAEIEEPDEEVDEADQETKTTKQPAYGSQKEGEQEESFPSSADDE
AEDPMVSKSIEAEKELVAQEKKREEDKKVAIEPKEEIVKKEEVVESDKPD
GKVAQLGDKAVVKKSTPPADGENQEPVKVKAENEKEEKKHAPIKTEKQDD
IDSTETDDAPSAEKPAEEKIASSESKPKTKSEDDPEAETKKSQPEKTETE
AAEKSVSDEKQAAEPNAESENRNDLTTSKATEAAQESVEKSPVEDASSPA
VEDLAAATTPQSPLGAADSAAETPPAETGDDSQASPLVAAVTPPVLALND
QPMEDTPAEEEARVSPSATVEEVVMAESANAGAMATEEAAKDDPAAMEID
DTSQEVMMQ*

LD28993.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:06:49

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dana\GF19339-PA	589	GF19339-PA	1..589	1..609	1418	57.2	Plus

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:06:50

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dere\GG18359-PA	613	GG18359-PA	1..613	1..609	2488	84	Plus

Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:06:51

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dgri\GH12018-PA	724	GH12018-PA	1..226	1..218	987	81	Plus

Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:15:12

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
PPP4R2r-PC	609	CG2890-PC	1..609	1..609	3071	100	Plus
PPP4R2r-PB	609	CG2890-PB	1..609	1..609	3071	100	Plus
PPP4R2r-PA	609	CG2890-PA	1..609	1..609	3071	100	Plus
PPP4R2r-PD	522	CG2890-PD	1..522	88..609	2616	100	Plus
Muc68D-PB	1514	CG6004-PB	325..809	148..605	248	19.5	Plus
Nopp140-PF	685	CG7421-PF	73..512	170..598	231	22.2	Plus
Nopp140-PB	686	CG7421-PB	73..512	170..598	231	22.2	Plus
Nopp140-PA	720	CG7421-PA	73..512	170..598	231	22.2	Plus
Nopp140-PE	773	CG7421-PE	73..512	170..598	231	22.2	Plus
futsch-PF	5495	CG34387-PF	3444..3918	159..605	230	22.4	Plus
futsch-PE	5495	CG34387-PE	3444..3918	159..605	230	22.4	Plus
futsch-PC	5495	CG34387-PC	3444..3918	159..605	230	22.4	Plus
Sh3beta-PE	485	CG8582-PE	89..484	115..490	228	23.7	Plus
tnc-PD	2819	CG13648-PD	455..962	131..606	227	22.9	Plus
tnc-PC	2819	CG13648-PC	455..962	131..606	227	22.9	Plus
Strn-Mlck-PT	7905	CG44162-PT	4258..4651	205..595	221	23.3	Plus
Strn-Mlck-PV	7944	CG44162-PV	4297..4690	205..595	221	23.3	Plus
Strn-Mlck-PS	8216	CG44162-PS	4258..4651	205..595	221	23.3	Plus
Strn-Mlck-PU	8255	CG44162-PU	4297..4690	205..595	221	23.3	Plus
Strn-Mlck-PT	7905	CG44162-PT	4329..4773	125..588	218	21.5	Plus
Strn-Mlck-PV	7944	CG44162-PV	4368..4812	125..588	218	21.5	Plus
Strn-Mlck-PS	8216	CG44162-PS	4329..4773	125..588	218	21.5	Plus
Strn-Mlck-PU	8255	CG44162-PU	4368..4812	125..588	218	21.5	Plus
Sh3beta-PE	485	CG8582-PE	125..471	210..563	216	25.1	Plus
Strn-Mlck-PT	7905	CG44162-PT	3501..3936	141..595	215	21.9	Plus
Strn-Mlck-PV	7944	CG44162-PV	3540..3975	141..595	215	21.9	Plus
Strn-Mlck-PS	8216	CG44162-PS	3501..3936	141..595	215	21.9	Plus
Strn-Mlck-PU	8255	CG44162-PU	3540..3975	141..595	215	21.9	Plus
Strn-Mlck-PT	7905	CG44162-PT	4024..4488	107..572	213	21.6	Plus
Strn-Mlck-PV	7944	CG44162-PV	4063..4527	107..572	213	21.6	Plus
Strn-Mlck-PS	8216	CG44162-PS	4024..4488	107..572	213	21.6	Plus
Strn-Mlck-PU	8255	CG44162-PU	4063..4527	107..572	213	21.6	Plus
Muc68D-PB	1514	CG6004-PB	230..710	131..605	210	19.6	Plus
futsch-PF	5495	CG34387-PF	2066..2499	194..599	210	22.6	Plus
futsch-PE	5495	CG34387-PE	2066..2499	194..599	210	22.6	Plus
futsch-PC	5495	CG34387-PC	2066..2499	194..599	210	22.6	Plus
Strn-Mlck-PT	7905	CG44162-PT	2675..3182	21..503	209	22.6	Plus
Strn-Mlck-PV	7944	CG44162-PV	2714..3221	21..503	209	22.6	Plus
Strn-Mlck-PS	8216	CG44162-PS	2675..3182	21..503	209	22.6	Plus
Strn-Mlck-PU	8255	CG44162-PU	2714..3221	21..503	209	22.6	Plus
ImpE1-PC	1616	CG32356-PC	439..830	209..598	208	24.5	Plus
ImpE1-PA	1616	CG32356-PA	439..830	209..598	208	24.5	Plus
CG13185-PD	5526	CG13185-PD	4600..4995	141..531	206	22.7	Plus
sls-PY	10625	CG1915-PY	7736..8135	203..601	206	22.9	Plus
sls-PZ	15155	CG1915-PZ	12589..12988	203..601	206	22.9	Plus
sls-PW	15478	CG1915-PW	12589..12988	203..601	206	22.9	Plus
sls-PS	15481	CG1915-PS	12592..12991	203..601	206	22.9	Plus
sls-PU	15953	CG1915-PU	13064..13463	203..601	206	22.9	Plus
sls-PV	16146	CG1915-PV	13257..13656	203..601	206	22.9	Plus
sls-PT	18017	CG1915-PT	15128..15527	203..601	206	22.9	Plus
sls-PX	18031	CG1915-PX	15142..15541	203..601	206	22.9	Plus
sls-PR	18117	CG1915-PR	15551..15950	203..601	206	22.9	Plus
sls-PQ	18440	CG1915-PQ	15551..15950	203..601	206	22.9	Plus
sls-PP	18468	CG1915-PP	15572..15971	203..601	206	22.9	Plus
Strn-Mlck-PT	7905	CG44162-PT	3440..3806	232..595	205	22.9	Plus
Strn-Mlck-PV	7944	CG44162-PV	3479..3845	232..595	205	22.9	Plus
Strn-Mlck-PS	8216	CG44162-PS	3440..3806	232..595	205	22.9	Plus
Strn-Mlck-PU	8255	CG44162-PU	3479..3845	232..595	205	22.9	Plus
futsch-PF	5495	CG34387-PF	1748..2216	138..605	204	21.5	Plus
futsch-PF	5495	CG34387-PF	3642..4139	141..605	204	22.2	Plus
futsch-PE	5495	CG34387-PE	1748..2216	138..605	204	21.5	Plus
futsch-PE	5495	CG34387-PE	3642..4139	141..605	204	22.2	Plus
futsch-PC	5495	CG34387-PC	1748..2216	138..605	204	21.5	Plus
futsch-PC	5495	CG34387-PC	3642..4139	141..605	204	22.2	Plus
Strn-Mlck-PT	7905	CG44162-PT	4602..5186	15..603	204	20.6	Plus
Strn-Mlck-PV	7944	CG44162-PV	4641..5225	15..603	204	20.6	Plus
Strn-Mlck-PS	8216	CG44162-PS	4602..5186	15..603	204	20.6	Plus
Strn-Mlck-PU	8255	CG44162-PU	4641..5225	15..603	204	20.6	Plus
Strn-Mlck-PT	7905	CG44162-PT	3738..4131	205..595	203	23.2	Plus
Strn-Mlck-PT	7905	CG44162-PT	3809..4293	125..572	203	21.2	Plus
Strn-Mlck-PV	7944	CG44162-PV	3777..4170	205..595	203	23.2	Plus
Strn-Mlck-PV	7944	CG44162-PV	3848..4332	125..572	203	21.2	Plus
Strn-Mlck-PS	8216	CG44162-PS	3738..4131	205..595	203	23.2	Plus
Strn-Mlck-PS	8216	CG44162-PS	3809..4293	125..572	203	21.2	Plus
Strn-Mlck-PU	8255	CG44162-PU	3777..4170	205..595	203	23.2	Plus
Strn-Mlck-PU	8255	CG44162-PU	3848..4332	125..572	203	21.2	Plus
CG1910-PD	439	CG1910-PD	56..434	214..590	203	23.3	Plus
CG1910-PC	466	CG1910-PC	83..461	214..590	203	23.3	Plus
CG1910-PA	489	CG1910-PA	106..484	214..590	203	23	Plus
Muc68D-PB	1514	CG6004-PB	572..1043	138..605	201	18.6	Plus
Muc68D-PB	1514	CG6004-PB	632..1093	138..591	201	18.1	Plus
futsch-PF	5495	CG34387-PF	2888..3361	142..605	201	21.7	Plus
futsch-PE	5495	CG34387-PE	2888..3361	142..605	201	21.7	Plus
futsch-PC	5495	CG34387-PC	2888..3361	142..605	201	21.7	Plus
tnc-PD	2819	CG13648-PD	1875..2283	202..602	200	22.8	Plus
tnc-PC	2819	CG13648-PC	1875..2283	202..602	200	22.8	Plus
Strn-Mlck-PT	7905	CG44162-PT	3445..3863	202..588	198	22.2	Plus
Strn-Mlck-PV	7944	CG44162-PV	3484..3902	202..588	198	22.2	Plus
Strn-Mlck-PS	8216	CG44162-PS	3445..3863	202..588	198	22.2	Plus
Strn-Mlck-PU	8255	CG44162-PU	3484..3902	202..588	198	22.2	Plus
Strn-Mlck-PT	7905	CG44162-PT	3626..4074	166..607	196	22	Plus
Strn-Mlck-PV	7944	CG44162-PV	3665..4113	166..607	196	22	Plus
Strn-Mlck-PS	8216	CG44162-PS	3626..4074	166..607	196	22	Plus
Strn-Mlck-PU	8255	CG44162-PU	3665..4113	166..607	196	22	Plus
rudhira-PE	2075	CG43154-PE	1363..1763	204..572	195	24.1	Plus
rudhira-PC	2075	CG43154-PC	1363..1763	204..572	195	24.1	Plus
Muc68D-PB	1514	CG6004-PB	429..882	138..604	194	18.9	Plus
CG14692-PE	2851	CG14692-PE	1011..1442	144..577	194	20.4	Plus
futsch-PF	5495	CG34387-PF	3062..3622	116..605	193	22.9	Plus
futsch-PF	5495	CG34387-PF	3838..4268	190..607	193	24.2	Plus
futsch-PE	5495	CG34387-PE	3062..3622	116..605	193	22.9	Plus
futsch-PE	5495	CG34387-PE	3838..4268	190..607	193	24.2	Plus
futsch-PC	5495	CG34387-PC	3062..3622	116..605	193	22.9	Plus
futsch-PC	5495	CG34387-PC	3838..4268	190..607	193	24.2	Plus
CG3108-PA	1132	CG3108-PA	107..530	200..599	192	18.5	Plus
tnc-PD	2819	CG13648-PD	1152..1572	212..601	191	23.8	Plus
tnc-PC	2819	CG13648-PC	1152..1572	212..601	191	23.8	Plus
Strn-Mlck-PT	7905	CG44162-PT	4453..4813	205..572	191	22.4	Plus
Strn-Mlck-PV	7944	CG44162-PV	4492..4852	205..572	191	22.4	Plus
Strn-Mlck-PS	8216	CG44162-PS	4453..4813	205..572	191	22.4	Plus
Strn-Mlck-PU	8255	CG44162-PU	4492..4852	205..572	191	22.4	Plus
CG14692-PE	2851	CG14692-PE	978..1371	203..603	189	19.4	Plus
Akap200-PE	753	CG13388-PE	21..458	204..605	189	22.3	Plus
Akap200-PA	753	CG13388-PA	21..458	204..605	189	22.3	Plus
Muc68D-PB	1514	CG6004-PB	698..1123	138..598	187	17.6	Plus
tnc-PD	2819	CG13648-PD	1601..2012	191..604	187	22.6	Plus
tnc-PC	2819	CG13648-PC	1601..2012	191..604	187	22.6	Plus
Strn-Mlck-PT	7905	CG44162-PT	4583..4976	205..595	186	23.6	Plus
Strn-Mlck-PV	7944	CG44162-PV	4622..5015	205..595	186	23.6	Plus
Strn-Mlck-PS	8216	CG44162-PS	4583..4976	205..595	186	23.6	Plus
Strn-Mlck-PU	8255	CG44162-PU	4622..5015	205..595	186	23.6	Plus
CG11180-PA	726	CG11180-PA	250..598	202..532	185	25.1	Plus
woc-PE	1702	CG5965-PE	45..408	181..562	185	23.1	Plus
CG11180-PB	603	CG11180-PB	250..569	202..502	184	25.6	Plus
Strn-Mlck-PT	7905	CG44162-PT	2666..3163	148..606	183	22.6	Plus
Strn-Mlck-PV	7944	CG44162-PV	2705..3202	148..606	183	22.6	Plus
Strn-Mlck-PS	8216	CG44162-PS	2666..3163	148..606	183	22.6	Plus
Strn-Mlck-PU	8255	CG44162-PU	2705..3202	148..606	183	22.6	Plus
Claspin-PB	1465	CG32251-PB	106..497	195..591	183	21.3	Plus
Claspin-PA	1465	CG32251-PA	106..497	195..591	183	21.3	Plus
woc-PD	1687	CG5965-PD	45..393	181..562	183	23.2	Plus
woc-PA	1688	CG5965-PA	45..394	181..562	183	22.9	Plus
tnc-PD	2819	CG13648-PD	1839..2192	250..605	182	22.9	Plus
tnc-PC	2819	CG13648-PC	1839..2192	250..605	182	22.9	Plus
eIF5B-PD	1090	CG10840-PD	13..504	147..605	182	20.8	Plus
eIF5B-PE	1108	CG10840-PE	13..504	147..605	182	20.8	Plus
futsch-PF	5495	CG34387-PF	2214..2662	194..609	180	21.5	Plus
futsch-PE	5495	CG34387-PE	2214..2662	194..609	180	21.5	Plus
futsch-PC	5495	CG34387-PC	2214..2662	194..609	180	21.5	Plus
tnc-PD	2819	CG13648-PD	302..743	218..609	179	22.9	Plus
tnc-PC	2819	CG13648-PC	302..743	218..609	179	22.9	Plus
sls-PY	10625	CG1915-PY	7576..7989	208..591	179	22.6	Plus
sls-PZ	15155	CG1915-PZ	12429..12842	208..591	179	22.6	Plus
sls-PW	15478	CG1915-PW	12429..12842	208..591	179	22.6	Plus
sls-PS	15481	CG1915-PS	12432..12845	208..591	179	22.6	Plus
sls-PU	15953	CG1915-PU	12904..13317	208..591	179	22.6	Plus
sls-PV	16146	CG1915-PV	13097..13510	208..591	179	22.6	Plus
sls-PT	18017	CG1915-PT	14968..15381	208..591	179	22.6	Plus
sls-PX	18031	CG1915-PX	14982..15395	208..591	179	22.6	Plus
sls-PR	18117	CG1915-PR	15391..15804	208..591	179	22.6	Plus
sls-PQ	18440	CG1915-PQ	15391..15804	208..591	179	22.6	Plus
sls-PP	18468	CG1915-PP	15412..15825	208..591	179	22.6	Plus
futsch-PF	5495	CG34387-PF	1302..1746	206..607	176	24.9	Plus
futsch-PF	5495	CG34387-PF	2852..3321	184..604	176	20	Plus
futsch-PE	5495	CG34387-PE	1302..1746	206..607	176	24.9	Plus
futsch-PE	5495	CG34387-PE	2852..3321	184..604	176	20	Plus
futsch-PC	5495	CG34387-PC	1302..1746	206..607	176	24.9	Plus
futsch-PC	5495	CG34387-PC	2852..3321	184..604	176	20	Plus
CG13185-PD	5526	CG13185-PD	4813..5170	140..494	175	21.8	Plus
Claspin-PB	1465	CG32251-PB	210..555	195..526	175	22.3	Plus
Claspin-PA	1465	CG32251-PA	210..555	195..526	175	22.3	Plus
tnc-PD	2819	CG13648-PD	593..1055	137..572	174	22.2	Plus
tnc-PC	2819	CG13648-PC	593..1055	137..572	174	22.2	Plus
rudhira-PE	2075	CG43154-PE	1322..1591	213..490	174	24.3	Plus
rudhira-PC	2075	CG43154-PC	1322..1591	213..490	174	24.3	Plus
woc-PE	1702	CG5965-PE	9..355	280..606	173	21.7	Plus
woc-PD	1687	CG5965-PD	9..355	280..606	173	21.7	Plus
woc-PA	1688	CG5965-PA	9..355	280..606	173	21.7	Plus
futsch-PF	5495	CG34387-PF	1399..1768	202..567	171	21.8	Plus
futsch-PE	5495	CG34387-PE	1399..1768	202..567	171	21.8	Plus
futsch-PC	5495	CG34387-PC	1399..1768	202..567	171	21.8	Plus
sls-PY	10625	CG1915-PY	7980..8386	227..605	171	23.4	Plus
sls-PZ	15155	CG1915-PZ	12833..13239	227..605	171	23.4	Plus
sls-PW	15478	CG1915-PW	12833..13239	227..605	171	23.4	Plus
sls-PS	15481	CG1915-PS	12836..13242	227..605	171	23.4	Plus
sls-PU	15953	CG1915-PU	13308..13714	227..605	171	23.4	Plus
sls-PV	16146	CG1915-PV	13501..13907	227..605	171	23.4	Plus
sls-PT	18017	CG1915-PT	15372..15778	227..605	171	23.4	Plus
sls-PX	18031	CG1915-PX	15386..15792	227..605	171	23.4	Plus
sls-PR	18117	CG1915-PR	15795..16201	227..605	171	23.4	Plus
sls-PQ	18440	CG1915-PQ	15795..16201	227..605	171	23.4	Plus
sls-PP	18468	CG1915-PP	15816..16222	227..605	171	23.4	Plus
CG14692-PE	2851	CG14692-PE	992..1412	157..603	169	22.1	Plus
sls-PY	10625	CG1915-PY	5629..6113	196..609	168	22	Plus
sls-PS	15481	CG1915-PS	5629..6113	196..609	168	22	Plus
sls-PU	15953	CG1915-PU	5629..6113	196..609	168	22	Plus
sls-PV	16146	CG1915-PV	5629..6113	196..609	168	22	Plus
sls-PT	18017	CG1915-PT	5629..6113	196..609	168	22	Plus
sls-PX	18031	CG1915-PX	5629..6113	196..609	168	22	Plus
sls-PR	18117	CG1915-PR	5629..6113	196..609	168	22	Plus
sls-PQ	18440	CG1915-PQ	5629..6113	196..609	168	22	Plus
sls-PP	18468	CG1915-PP	5629..6113	196..609	168	22	Plus
futsch-PF	5495	CG34387-PF	1493..1952	195..604	167	21.5	Plus
futsch-PE	5495	CG34387-PE	1493..1952	195..604	167	21.5	Plus
futsch-PC	5495	CG34387-PC	1493..1952	195..604	167	21.5	Plus
Strn-Mlck-PT	7905	CG44162-PT	2568..2923	272..602	167	21.6	Plus
Strn-Mlck-PV	7944	CG44162-PV	2607..2962	272..602	167	21.6	Plus
Strn-Mlck-PS	8216	CG44162-PS	2568..2923	272..602	167	21.6	Plus
Strn-Mlck-PU	8255	CG44162-PU	2607..2962	272..602	167	21.6	Plus
tnc-PD	2819	CG13648-PD	1390..1868	197..605	165	23.3	Plus
tnc-PC	2819	CG13648-PC	1390..1868	197..605	165	23.3	Plus
ImpE1-PC	1616	CG32356-PC	612..1022	203..601	165	22.2	Plus
ImpE1-PA	1616	CG32356-PA	612..1022	203..601	165	22.2	Plus
sls-PY	10625	CG1915-PY	6037..6413	209..573	164	21.8	Plus
sls-PS	15481	CG1915-PS	6037..6413	209..573	164	21.8	Plus
sls-PU	15953	CG1915-PU	6037..6413	209..573	164	21.8	Plus
sls-PV	16146	CG1915-PV	6037..6413	209..573	164	21.8	Plus
sls-PT	18017	CG1915-PT	6037..6413	209..573	164	21.8	Plus
sls-PX	18031	CG1915-PX	6037..6413	209..573	164	21.8	Plus
sls-PR	18117	CG1915-PR	6037..6413	209..573	164	21.8	Plus
sls-PQ	18440	CG1915-PQ	6037..6413	209..573	164	21.8	Plus
sls-PP	18468	CG1915-PP	6037..6413	209..573	164	21.8	Plus
Nopp140-PF	685	CG7421-PF	32..358	255..598	163	23.8	Plus
Nopp140-PB	686	CG7421-PB	32..358	255..598	163	23.8	Plus
Nopp140-PA	720	CG7421-PA	32..358	255..598	163	23.8	Plus
Nopp140-PE	773	CG7421-PE	32..358	255..598	163	23.8	Plus
tnc-PD	2819	CG13648-PD	2255..2627	181..558	162	20.7	Plus
tnc-PC	2819	CG13648-PC	2255..2627	181..558	162	20.7	Plus
Sh3beta-PE	485	CG8582-PE	28..380	248..609	161	22.1	Plus
sls-PY	10625	CG1915-PY	7854..8459	1..573	159	20	Plus
sls-PZ	15155	CG1915-PZ	12707..13312	1..573	159	20	Plus
sls-PW	15478	CG1915-PW	12707..13312	1..573	159	20	Plus
sls-PS	15481	CG1915-PS	12710..13315	1..573	159	20	Plus
sls-PU	15953	CG1915-PU	13182..13787	1..573	159	20	Plus
sls-PV	16146	CG1915-PV	13375..13980	1..573	159	20	Plus
sls-PT	18017	CG1915-PT	15246..15851	1..573	159	20	Plus
sls-PX	18031	CG1915-PX	15260..15865	1..573	159	20	Plus
sls-PR	18117	CG1915-PR	15669..16274	1..573	159	20	Plus
sls-PQ	18440	CG1915-PQ	15669..16274	1..573	159	20	Plus
sls-PP	18468	CG1915-PP	15690..16295	1..573	159	20	Plus
Claspin-PB	1465	CG32251-PB	12..304	223..491	159	23.4	Plus
Claspin-PA	1465	CG32251-PA	12..304	223..491	159	23.4	Plus
Nopp140-PF	685	CG7421-PF	195..569	172..536	158	22	Plus
Nopp140-PB	686	CG7421-PB	195..569	172..536	158	22	Plus
Nopp140-PA	720	CG7421-PA	195..569	172..536	158	22	Plus
Nopp140-PE	773	CG7421-PE	195..569	172..536	158	22	Plus

Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:06:53

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dmoj\GI15529-PA	620	GI15529-PA	1..207	1..205	987	84.5	Plus

Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:06:54

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dper\GL14973-PA	575	GL14973-PA	1..206	4..203	943	86.4	Plus

Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:06:55

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dpse\GA22364-PB	642	GA22364-PB	1..642	4..609	1115	50.2	Plus

Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:06:57

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsec\GM11423-PA	598	GM11423-PA	1..598	1..609	2667	87.8	Plus

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:06:58

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dsim\GD16977-PA	958	GD16977-PA	1..490	1..501	2129	87.6	Plus

Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:06:59

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dvir\GJ17045-PA	618	GJ17045-PA	1..221	1..218	1032	85.5	Plus

Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:07:00

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dwil\GK20099-PA	713	GK20099-PA	1..370	1..351	1034	60.3	Plus

Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:07:02

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
Dyak\GE17847-PA	612	GE17847-PA	1..612	1..609	2266	83.8	Plus

LD28993.hyp Sequence

Translation from 156 to 1985

> LD28993.hyp
MVTMENSDEIMQILERFTDLKQKEIPKELEEYLQYVAKTGDTIFKWSSLK
YLFREKLLSVIKHFNEDSPRLEEIPNYPNVDPFNYETMKSSLLERLDLFN
AAPFTVQRLCELLIDPRKQYSRIDKFMRALEKNILVVSTIDPGRKRTESE
NGDSLDSVVNGDLSMEVNIDIEMENNNGNADEGSSPGAGSAGCAQKASCP
RSDDNDQPKAKKAKLEIDGEERSEASDETDTEVATRVKNEKDEKNDNDET
DSPHEAAEIEEPDEEVDEADQETKTTKQPAYGSQKEGEQEESFPSSADDE
AEDPMVSKSIEAEKELVAQEKKREEDKKVAIEPKEEIVKKEEVVESDKPD
GKVAQLGDKAVVKKSTPPADGENQEPVKVKAENEKEEKKHAPIKTEKQDD
IDSTETDDAPSAEKPAEEKIASSESKPKTKSEDDPEAETKKSQPEKTETE
AAEKSVSDEKQAAEPNAESENRNDLTTSKATEAAQESVEKSPVEDASSPA
VEDLAAATTPQSPLGAADSAAETPPAETGDDSQASPLVAAVTPPVLALND
QPMEDTPAEEEARVSPSATVEEVVMAESANAGAMATEEAAKDDPAAMEID
DTSQEVMMQ*

LD28993.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 15:33:49

Subject	Length	Description	Subject Range	Query Range	Score	Percent	Strand
PPP4R2r-PC	609	CG2890-PC	1..609	1..609	3071	100	Plus
PPP4R2r-PB	609	CG2890-PB	1..609	1..609	3071	100	Plus
PPP4R2r-PA	609	CG2890-PA	1..609	1..609	3071	100	Plus
PPP4R2r-PD	522	CG2890-PD	1..522	88..609	2616	100	Plus
Muc68D-PB	1514	CG6004-PB	325..809	148..605	248	19.5	Plus

Library:	LD
Tissue Source:	Drosophila melanogaster embryo
Created by:	Ling Hong
Date Registered:	1997-12-04
Comments:	Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:	289
Well:	93
Vector:	pOT2
Associated Gene/Transcript	PPP4R2r-RA
Protein status:	LD28993.pep: gold
Preliminary Size:	2632
Sequenced Size:	2440

Clone LD28993 Report

Clone and Library Details

Associated Genes

Clone Sequence Records

LD28993.complete Sequence

LD28993.complete Blast Records

LD28993.complete Sim4 Records

LD28993.pep Sequence

LD28993.pep Blast Records

LD28993.hyp Sequence

LD28993.hyp Blast Records