Clone LD29068 Report

Search the DGRC for LD29068

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:290
Well:68
Vector:pOT2
Associated Gene/Transcriptaret-RA
Protein status:LD29068.pep: gold
Preliminary Size:2531
Sequenced Size:2300

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6319 2001-01-01 Release 2 assignment
CG31762 2001-07-04 Blastp of sequenced clone
CG31762 2003-01-01 Sim4 clustering to Release 3
aret 2008-04-29 Release 5.5 accounting
aret 2008-08-15 Release 5.9 accounting
aret 2008-12-18 5.12 accounting

Clone Sequence Records

LD29068.complete Sequence

2300 bp (2300 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051758

> LD29068.complete
ATTGACCGAAAAGGAAGTGCGAGAAAGAAGAAGAGGAAGAGGGAGGAGAA
GCGAAGCCGCTGCGTTTATATATTAAATATATAGCTTTTTTTAATTAGTC
ACGTTGAGTTCCGAGTGCCGTGTTAAGTGGAAGTATTTATTTAGGCCCTT
AATTTAATCAATCCGACCTCGAGTGTCCGTGTGCGTTAACAGTAAACGTG
AAGCGTATTGGTATTGGTAATTGGCTGCCGCTAAATTGAAAGTTTCAAGT
TTTCCCGTTCATTATTCATTATTCGCGTCGACCGTGTAAAAAATTCAGTT
TGATAACGCAAATATGTTCACCAGCCGCGCTTCGTTTTTGGCCAATCGCC
GCATGATTTTCGATTTCTCCGAGAAGAACAACGATATCTACTTGGATGCT
TTTGGTATGAGTGATAAGAGCAGCAGTGCAACGAACAGCCTGCCGAATAG
TCCCATACACAGCAACAACAATAATCCATCGCTGCTGAACAACAACAACA
ATAACAGCAACGGCACCAGCAGCAACAACAGCTTAAACGTTGGCAACAAC
AACAGCAATCCGAGCTTGGGCGGCAGCAACAGCAACGCACTGGTTTCCGT
AGGCAGCAACGGTATAATGTCCGCCGCCGGTTTGGTCAACAACAATAACA
ATCCGTGCAGCGCCAACCGCAATGTGGTCGCCATGGTCGACGATGACGCC
TGCTTCCGTCTGGATACGGACGCCACGGTGACGTACGGCGAGAAGGAACC
GGATCCGGACAACATCAAGATGTTCGTCGGCCAGGTGCCCAAGTCGATGG
ACGAGTCGCAGCTGCGCGAGATGTTCGAGGAGTACGGCGCCGTGCACTCG
ATCAACGTTCTGCGGGACAAGGCTACCGGAATTAGCAAGGGTTGCTGCTT
TGTGACATTTTATACGAGACACGCCGCCCTGAAAGCCCAGGATGCTTTGC
ATAATGTTAAGACGCTAAATGGGATGTACCATCCCATTCAAATGAAGCCC
GCCGATAGCGAGAATCGCAATGAACGCAAACTCTTTGTGGGTATGCTAAA
CAAGAAGCTGAACGAGAACGACGTTCGCAAGCTATTTGAAGTCCACGGAG
CCATCGAGGAGTGCACCGTCCTTCGGGACCAAAACGGACAGAGCAAGGGT
TGTGCCTTCGTCACATTCGCCACCAAGCACGCTGCCATTTCGGCCATTAA
AGTGACCCTGAGCCAGAACAAGATCATGGAGGGCTGCACATCGCCGCTGG
TCGTCAAGTTCGCCGATACGCAAAAAGAGAAGGAGCAGAAGAAGATTCAG
CAAATTCAGGCCAATCTCTGGAACCTGGCCAGCAACATCAACATACCTCT
GGGCCAAACGGCCACCAGCGTGACCACGCCCATCCTGCCCAATCCGCCGC
AGCAGCCTTCGCCGGTTCTCGGCGCAGATGCCATTACCCCGGCCTCCATT
CAACTGCTGCAGCAGCTGCAGGCGGTGGGACTGCAGCACCAGTTGTTGCA
AGCCCTCACAGGACTGGGAGCCCAGCAGAGCAGCTCGGCGACGGACACCA
GCGCTGTGGCGGCCGCAGGACTTTTGACCCCGATGACCGTCCAGAATCTA
GCGGCCATTGCGGCCATGACGCAGCCGAGTCTCTCGAATGCCGCCGCGGC
AGCCGCCGCTGCCACATCGCCTGGAAGCGCCCAACTGACCAACACGGCTG
CGCTGCTCTGGTCCGATCCGAATCCAATGGCATCGGCATATATGTCAACA
GCCGCCGGTCTGCCGCAATTCGGGAGCGCCAGTGCATTGTCCACTTCGCC
GCTGGCCAGCGTTGCCCTCAGCGCCGCAGCCGCCGCCGCAGCGGGAAAGC
AGATTGAAGGACCCGAGGGCTGCAACCTTTTCATCTACCATCTGCCGCAG
GAGTTCACCGATACGGATCTGGCCTCCACGTTCCTGCCCTTCGGCAATGT
GATCTCGGCCAAGGTGTTCATCGACAAACAGACGAGCCTGTCGAAGTGCT
TCGGGTTTGTCTCCTTCGACAATCCGGACTCGGCCCAGGTGGCCATAAAG
GCGATGAACGGCTTCCAGGTGGGCACCAAGCGTCTCAAGGTGCAGCTGAA
GAAGCCCAAGGACTCGAAGCCCTACTAGAGGCCACCATCGGCGGCAAGGT
TAAACGGACACATCGAGTAGAGGAACACTGAGATTTGTGAAATATGGAGT
AGTCAATGAATGAAGAGTTGCCCGTGTAGAGCGCGTTGCAAGATTTAAAC
GATGATGCGAATGCCAACGTTGTACGTATCATAAAAAAAAAAAAAAAAAA

LD29068.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:31:51
Subject Length Description Subject Range Query Range Score Percent Strand
aret.i 2700 aret.i 53..2351 1..2299 11480 99.9 Plus
aret-RE 2455 aret-RE 53..2351 1..2299 11480 99.9 Plus
aret.h 3186 aret.h 53..2351 1..2299 11480 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:53:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 12270228..12270723 397..892 2480 100 Plus
chr2L 23010047 chr2L 12309334..12309758 1858..2282 2125 100 Plus
chr2L 23010047 chr2L 12269589..12269984 1..396 1980 100 Plus
chr2L 23010047 chr2L 12297458..12297756 1204..1502 1480 99.7 Plus
chr2L 23010047 chr2L 12297831..12298040 1501..1710 1050 100 Plus
chr2L 23010047 chr2L 12297212..12297394 1022..1204 915 100 Plus
chr2L 23010047 chr2L 12303103..12303253 1710..1860 755 100 Plus
chr2L 23010047 chr2L 12394895..12395128 1858..2091 450 79.5 Plus
chr2L 23010047 chr2L 12277476..12277559 890..973 405 98.8 Plus
chr2L 23010047 chr2L 12281151..12281200 973..1022 250 100 Plus
chr2L 23010047 chr2L 12384241..12384327 1093..1179 240 85.1 Plus
chr2L 23010047 chr2L 12356751..12356874 749..872 185 76.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:21:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:53:22
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12271591..12272086 397..892 2480 100 Plus
2L 23513712 2L 12310680..12311121 1858..2299 2195 99.8 Plus
2L 23513712 2L 12270952..12271347 1..396 1980 100 Plus
2L 23513712 2L 12298813..12299111 1204..1502 1495 100 Plus
2L 23513712 2L 12299186..12299395 1501..1710 1050 100 Plus
2L 23513712 2L 12298567..12298749 1022..1204 915 100 Plus
2L 23513712 2L 12304446..12304596 1710..1860 755 100 Plus
2L 23513712 2L 12396291..12396524 1858..2091 450 79.5 Plus
2L 23513712 2L 12278836..12278919 890..973 420 100 Plus
2L 23513712 2L 12282513..12282562 973..1022 250 100 Plus
2L 23513712 2L 12385632..12385718 1093..1179 240 85.1 Plus
2L 23513712 2L 12358120..12358243 749..872 185 76.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:53:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12271591..12272086 397..892 2480 100 Plus
2L 23513712 2L 12310680..12311121 1858..2299 2195 99.7 Plus
2L 23513712 2L 12270952..12271347 1..396 1980 100 Plus
2L 23513712 2L 12298813..12299111 1204..1502 1495 100 Plus
2L 23513712 2L 12299186..12299395 1501..1710 1050 100 Plus
2L 23513712 2L 12298567..12298749 1022..1204 915 100 Plus
2L 23513712 2L 12304446..12304596 1710..1860 755 100 Plus
2L 23513712 2L 12396291..12396524 1858..2091 450 79.4 Plus
2L 23513712 2L 12278836..12278919 890..973 420 100 Plus
2L 23513712 2L 12282513..12282562 973..1022 250 100 Plus
2L 23513712 2L 12385632..12385718 1093..1179 240 85 Plus
Blast to na_te.dros performed 2019-03-16 21:53:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2540 434..666 256 60.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6919 488..672 239 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..6899 419..586 239 64.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2335..2514 410..586 235 62.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6725..6848 460..586 231 68 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6893 446..610 222 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6780..6946 419..585 215 63.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2365..2630 416..672 207 58.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2307..2394 499..586 197 69.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6720..6886 515..672 173 61.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2452 512..671 168 61.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2474 503..672 167 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1518..1615 460..559 162 66.7 Plus
roo 9092 roo DM_ROO 9092bp 1081..1154 459..532 153 70.7 Plus
roo 9092 roo DM_ROO 9092bp 1059..1142 506..586 143 65.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2463..2532 460..532 141 69.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2811..2939 460..585 134 60.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1496..1584 502..586 130 62.9 Plus

LD29068.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:54:16 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 12269589..12269984 1..396 100 -> Plus
chr2L 12270228..12270721 397..890 100 -> Plus
chr2L 12277477..12277559 891..973 98 -> Plus
chr2L 12281152..12281200 974..1022 100 -> Plus
chr2L 12297213..12297394 1023..1204 100 -> Plus
chr2L 12297459..12297756 1205..1502 99 -> Plus
chr2L 12297833..12298039 1503..1709 100 -> Plus
chr2L 12303103..12303252 1710..1859 100 -> Plus
chr2L 12309336..12309758 1860..2282 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:20:41 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RE 1..1815 314..2128 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:07:24 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RA 1..1815 314..2128 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:52:18 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RA 1..1815 314..2128 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:35:42 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RA 1..1815 314..2128 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:36:46 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RA 17..2295 1..2282 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:20:41 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RE 1..2282 1..2282 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:24 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RE 21..2302 1..2282 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:52:19 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RA 17..2295 1..2282 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:35:42 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
aret-RE 21..2302 1..2282 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:54:16 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12299188..12299394 1503..1709 100 -> Plus
2L 12304446..12304595 1710..1859 100 -> Plus
2L 12270952..12271347 1..396 100 -> Plus
2L 12271591..12272084 397..890 100 -> Plus
2L 12278837..12278919 891..973 100 -> Plus
2L 12282514..12282562 974..1022 100 -> Plus
2L 12298568..12298749 1023..1204 100 -> Plus
2L 12298814..12299111 1205..1502 100 -> Plus
2L 12310682..12311104 1860..2282 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:54:16 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12299188..12299394 1503..1709 100 -> Plus
2L 12304446..12304595 1710..1859 100 -> Plus
2L 12270952..12271347 1..396 100 -> Plus
2L 12271591..12272084 397..890 100 -> Plus
2L 12278837..12278919 891..973 100 -> Plus
2L 12282514..12282562 974..1022 100 -> Plus
2L 12298568..12298749 1023..1204 100 -> Plus
2L 12298814..12299111 1205..1502 100 -> Plus
2L 12310682..12311104 1860..2282 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:54:16 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12299188..12299394 1503..1709 100 -> Plus
2L 12304446..12304595 1710..1859 100 -> Plus
2L 12270952..12271347 1..396 100 -> Plus
2L 12271591..12272084 397..890 100 -> Plus
2L 12278837..12278919 891..973 100 -> Plus
2L 12282514..12282562 974..1022 100 -> Plus
2L 12298568..12298749 1023..1204 100 -> Plus
2L 12298814..12299111 1205..1502 100 -> Plus
2L 12310682..12311104 1860..2282 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:24 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12270952..12271347 1..396 100 -> Plus
arm_2L 12271591..12272084 397..890 100 -> Plus
arm_2L 12278837..12278919 891..973 100 -> Plus
arm_2L 12282514..12282562 974..1022 100 -> Plus
arm_2L 12298568..12298749 1023..1204 100 -> Plus
arm_2L 12298814..12299111 1205..1502 100 -> Plus
arm_2L 12299188..12299394 1503..1709 100 -> Plus
arm_2L 12304446..12304595 1710..1859 100 -> Plus
arm_2L 12310682..12311104 1860..2282 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:30:50 Download gff for LD29068.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12278837..12278919 891..973 100 -> Plus
2L 12282514..12282562 974..1022 100 -> Plus
2L 12298568..12298749 1023..1204 100 -> Plus
2L 12270952..12271347 1..396 100 -> Plus
2L 12271591..12272084 397..890 100 -> Plus
2L 12298814..12299111 1205..1502 100 -> Plus
2L 12299188..12299394 1503..1709 100 -> Plus
2L 12304446..12304595 1710..1859 100 -> Plus
2L 12310682..12311104 1860..2282 100   Plus

LD29068.pep Sequence

Translation from 313 to 2127

> LD29068.pep
MFTSRASFLANRRMIFDFSEKNNDIYLDAFGMSDKSSSATNSLPNSPIHS
NNNNPSLLNNNNNNSNGTSSNNSLNVGNNNSNPSLGGSNSNALVSVGSNG
IMSAAGLVNNNNNPCSANRNVVAMVDDDACFRLDTDATVTYGEKEPDPDN
IKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFY
TRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLN
ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLS
QNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNINIPLGQTA
TSVTTPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTG
LGAQQSSSATDTSAVAAAGLLTPMTVQNLAAIAAMTQPSLSNAAAAAAAA
TSPGSAQLTNTAALLWSDPNPMASAYMSTAAGLPQFGSASALSTSPLASV
ALSAAAAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAK
VFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPKD
SKPY*

LD29068.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:30:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14192-PA 852 GF14192-PA 269..852 29..604 2356 91.5 Plus
Dana\GF19661-PA 229 GF19661-PA 80..229 453..604 468 64.7 Plus
Dana\GF14193-PA 519 GF14193-PA 414..505 145..236 432 76.1 Plus
Dana\bru-3-PA 422 GF10965-PA 275..422 469..604 409 58.8 Plus
Dana\GF19660-PA 215 GF19660-PA 1..89 244..333 354 74.4 Plus
Dana\GF19660-PA 215 GF19660-PA 4..82 160..239 160 40 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:30:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23776-PA 837 GG23776-PA 247..837 29..604 2957 96.1 Plus
Dere\GG23780-PA 646 GG23780-PA 303..511 143..358 851 71.8 Plus
Dere\GG23781-PA 163 GG23781-PA 26..163 465..604 447 68.1 Plus
Dere\bru-3-PA 422 GG13757-PA 275..422 469..604 404 58.1 Plus
Dere\GG16933-PA 255 GG16933-PA 38..205 149..318 206 31.2 Plus
Dere\GG23780-PA 646 GG23780-PA 399..609 152..390 158 28.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:30:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11642-PA 833 GH11642-PA 255..833 29..604 2160 82.3 Plus
Dgri\GH11645-PA 791 GH11645-PA 305..494 143..333 816 75.4 Plus
Dgri\GH14684-PA 421 GH14684-PA 274..421 469..604 410 58.8 Plus
Dgri\GH24172-PA 365 GH24172-PA 111..284 145..320 187 26.6 Plus
Dgri\GH24423-PA 353 GH24423-PA 229..349 473..599 181 40.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:18
Subject Length Description Subject Range Query Range Score Percent Strand
bru1-PE 604 CG31762-PE 1..604 1..604 3073 100 Plus
bru1-PA 604 CG31762-PA 1..604 1..604 3073 100 Plus
bru1-PF 620 CG31762-PF 1..620 1..604 3033 97.3 Plus
bru1-PG 810 CG31762-PG 235..810 29..604 2930 100 Plus
bru1-PB 810 CG31762-PB 235..810 29..604 2930 100 Plus
bru1-PK 573 CG31762-PK 1..573 32..604 2914 100 Plus
bru1-PJ 573 CG31762-PJ 1..573 32..604 2914 100 Plus
bru1-PI 573 CG31762-PI 1..573 32..604 2914 100 Plus
bru1-PH 573 CG31762-PH 1..573 32..604 2914 100 Plus
bru1-PD 361 CG31762-PD 1..361 244..604 1802 100 Plus
bru2-PK 737 CG43065-PK 232..737 80..604 1240 52.4 Plus
bru2-PD 737 CG31761-PD 232..737 80..604 1240 52.4 Plus
bru2-PL 893 CG43065-PL 232..643 80..516 810 45.7 Plus
bru2-PE 893 CG31761-PE 232..643 80..516 810 45.7 Plus
bru2-PM 664 CG43065-PM 232..613 80..509 807 45.7 Plus
bru2-PG 664 CG43065-PG 232..613 80..509 807 45.7 Plus
bru2-PA 632 CG31761-PA 232..579 80..456 802 49.4 Plus
bru2-PI 350 CG43065-PI 1..350 244..604 795 51.9 Plus
bru3-PH 416 CG43744-PH 21..416 221..604 673 44.7 Plus
bru3-PG 390 CG43744-PG 21..390 221..604 668 44.3 Plus
bru2-PJ 651 CG43065-PJ 12..651 19..604 664 32.4 Plus
bru2-PH 651 CG43065-PH 12..651 19..604 664 32.4 Plus
bru3-PI 384 CG43744-PI 19..384 225..604 661 44.2 Plus
bru3-PO 403 CG43744-PO 16..403 221..604 658 44.1 Plus
bru3-PN 403 CG43744-PN 16..403 221..604 658 44.1 Plus
bru3-PE 408 CG43744-PE 21..408 221..604 658 44.1 Plus
bru3-PA 422 CG43744-PA 35..422 221..604 658 44.1 Plus
bru3-PD 382 CG43744-PD 21..382 221..604 653 43.7 Plus
bru3-PC 396 CG43744-PC 35..396 221..604 653 43.7 Plus
bru2-PL 893 CG43065-PL 383..893 152..604 624 34.8 Plus
bru2-PE 893 CG31761-PE 383..893 152..604 624 34.8 Plus
bru3-PL 345 CG43744-PL 31..345 273..604 510 42.1 Plus
bru3-PM 370 CG43744-PM 31..370 273..604 503 41.2 Plus
bru3-PB 363 CG43744-PB 31..363 273..604 500 41.9 Plus
bru3-PF 337 CG43744-PF 31..337 273..604 495 41.4 Plus
bru3-PK 331 CG43744-PK 31..331 273..604 494 41.4 Plus
Rbp9-PH 439 CG3151-PH 38..347 65..380 267 28.7 Plus
Rbp9-PG 439 CG3151-PG 38..347 65..380 267 28.7 Plus
Rbp9-PF 439 CG3151-PF 38..347 65..380 267 28.7 Plus
Rbp9-PE 439 CG3151-PE 38..347 65..380 267 28.7 Plus
Rbp9-PJ 684 CG3151-PJ 38..347 65..380 267 28.7 Plus
Rbp9-PK 444 CG3151-PK 38..352 65..380 260 28.3 Plus
Rbp9-PI 444 CG3151-PI 38..352 65..380 260 28.3 Plus
Rbp9-PB 444 CG3151-PB 38..352 65..380 260 28.3 Plus
Rbp9-PC 444 CG3151-PC 38..352 65..380 260 28.3 Plus
Sxl-PW 344 CG43770-PW 5..317 45..371 205 23.5 Plus
Sxl-PJ 346 CG43770-PJ 5..317 45..371 205 23.5 Plus
Sxl-PG 346 CG43770-PG 5..317 45..371 205 23.5 Plus
Sxl-PH 366 CG43770-PH 5..317 45..371 205 23.5 Plus
Sxl-PAC 331 CG43770-PAC 8..302 30..371 202 23.9 Plus
Sxl-PP 352 CG43770-PP 31..325 30..371 202 23.9 Plus
Sxl-PT 354 CG43770-PT 31..325 30..371 202 23.9 Plus
Sxl-PD 354 CG43770-PD 31..325 30..371 202 23.9 Plus
bru2-PI 350 CG43065-PI 4..255 160..452 188 27 Plus
bru2-PM 664 CG43065-PM 288..569 231..510 172 27.5 Plus
bru2-PG 664 CG43065-PG 288..569 231..510 172 27.5 Plus
bru2-PA 632 CG31761-PA 288..569 231..510 172 27.5 Plus
Rbp9-PH 439 CG3151-PH 76..284 36..240 162 26.9 Plus
Rbp9-PG 439 CG3151-PG 76..284 36..240 162 26.9 Plus
Rbp9-PF 439 CG3151-PF 76..284 36..240 162 26.9 Plus
Rbp9-PE 439 CG3151-PE 76..284 36..240 162 26.9 Plus
Rbp9-PJ 684 CG3151-PJ 76..284 36..240 162 26.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:30:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17944-PA 851 GI17944-PA 266..851 29..604 2152 81.3 Plus
Dmoj\GI17946-PA 580 GI17946-PA 274..437 130..333 542 53.6 Plus
Dmoj\GI17947-PA 93 GI17947-PA 2..93 514..604 405 81.5 Plus
Dmoj\bru-3-PA 611 GI13095-PA 274..408 469..592 361 57 Plus
Dmoj\GI11879-PA 724 GI11879-PA 110..294 136..318 201 30.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:30:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18622-PA 398 GL18622-PA 29..398 237..604 1546 94.3 Plus
Dper\GL18624-PA 764 GL18624-PA 315..764 143..604 1217 55.7 Plus
Dper\GL21647-PA 458 GL21647-PA 311..458 469..604 404 58.1 Plus
Dper\GL21647-PA 458 GL21647-PA 39..112 225..295 233 58.1 Plus
Dper\GL26299-PA 678 GL26299-PA 105..275 145..318 222 32.6 Plus
Dper\GL18622-PA 398 GL18622-PA 25..118 146..239 184 40 Plus
Dper\GL23648-PA 503 GL23648-PA 167..331 146..295 181 30.7 Plus
Dper\GL26299-PA 678 GL26299-PA 191..259 515..583 158 42 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25725-PC 595 GA25725-PC 1..595 1..604 2464 89.6 Plus
Dpse\GA25725-PB 818 GA25725-PB 253..818 29..604 2336 89.8 Plus
Dpse\GA25731-PA 574 GA25731-PA 407..574 439..604 445 60.3 Plus
Dpse\bru-3-PA 421 GA28624-PA 274..421 469..604 404 58.1 Plus
Dpse\GA25731-PA 574 GA25731-PA 1..89 244..333 363 74.4 Plus
Dpse\GA25729-PA 140 GA25729-PA 25..102 143..220 326 70.5 Plus
Dpse\GA25731-PA 574 GA25731-PA 4..82 160..239 158 38.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:30:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26763-PA 816 GM26763-PA 229..816 29..604 2983 97.1 Plus
Dsec\GM26785-PA 644 GM26785-PA 299..507 143..357 845 71.2 Plus
Dsec\GM26796-PA 163 GM26796-PA 17..163 454..604 461 67.1 Plus
Dsec\bru-3-PA 422 GM24582-PA 275..422 469..604 404 58.1 Plus
Dsec\GM18380-PA 650 GM18380-PA 311..486 145..318 205 31.7 Plus
Dsec\GM26785-PA 644 GM26785-PA 395..605 152..390 161 28.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:30:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23828-PA 821 GD23828-PA 236..821 30..604 2962 96.1 Plus
Dsim\GD23834-PA 163 GD23834-PA 17..163 454..604 461 67.1 Plus
Dsim\GD23831-PA 166 GD23831-PA 44..142 143..241 433 72.7 Plus
Dsim\bru-3-PA 616 GD12651-PA 469..616 469..604 406 58.1 Plus
Dsim\GD23833-PA 245 GD23833-PA 1..108 244..357 372 66.7 Plus
Dsim\GD23833-PA 245 GD23833-PA 4..82 160..239 165 40 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:30:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17715-PA 831 GJ17715-PA 264..831 29..604 2215 82.8 Plus
Dvir\GJ17718-PA 738 GJ17718-PA 269..458 143..333 824 75.4 Plus
Dvir\bru-3-PA 421 GJ13842-PA 274..421 469..604 410 58.8 Plus
Dvir\GJ13991-PA 725 GJ13991-PA 97..272 145..318 211 31.7 Plus
Dvir\GJ10859-PA 388 GJ10859-PA 31..255 153..385 184 29.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:30:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15493-PA 866 GK15493-PA 246..866 29..604 2230 82.8 Plus
Dwil\GK15495-PA 758 GK15495-PA 276..490 143..361 830 68.9 Plus
Dwil\GK17101-PA 645 GK17101-PA 314..448 473..597 357 56.6 Plus
Dwil\GK14865-PA 725 GK14865-PA 116..291 145..318 205 31.7 Plus
Dwil\GK16445-PA 373 GK16445-PA 118..288 148..320 188 27 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:30:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18580-PA 830 GE18580-PA 242..830 29..604 2970 96.4 Plus
Dyak\GE18585-PA 508 GE18585-PA 371..508 465..604 460 69.5 Plus
Dyak\GE18583-PA 430 GE18583-PA 303..401 143..241 442 72.7 Plus
Dyak\bru-3-PA 422 GE20053-PA 275..422 469..604 404 58.1 Plus
Dyak\GE18585-PA 508 GE18585-PA 1..130 244..371 373 58.8 Plus
Dyak\GE18193-PA 446 GE18193-PA 107..282 145..318 209 31.7 Plus
Dyak\GE18585-PA 508 GE18585-PA 4..82 160..239 165 40 Plus

LD29068.hyp Sequence

Translation from 313 to 2127

> LD29068.hyp
MFTSRASFLANRRMIFDFSEKNNDIYLDAFGMSDKSSSATNSLPNSPIHS
NNNNPSLLNNNNNNSNGTSSNNSLNVGNNNSNPSLGGSNSNALVSVGSNG
IMSAAGLVNNNNNPCSANRNVVAMVDDDACFRLDTDATVTYGEKEPDPDN
IKMFVGQVPKSMDESQLREMFEEYGAVHSINVLRDKATGISKGCCFVTFY
TRHAALKAQDALHNVKTLNGMYHPIQMKPADSENRNERKLFVGMLNKKLN
ENDVRKLFEVHGAIEECTVLRDQNGQSKGCAFVTFATKHAAISAIKVTLS
QNKIMEGCTSPLVVKFADTQKEKEQKKIQQIQANLWNLASNINIPLGQTA
TSVTTPILPNPPQQPSPVLGADAITPASIQLLQQLQAVGLQHQLLQALTG
LGAQQSSSATDTSAVAAAGLLTPMTVQNLAAIAAMTQPSLSNAAAAAAAA
TSPGSAQLTNTAALLWSDPNPMASAYMSTAAGLPQFGSASALSTSPLASV
ALSAAAAAAAGKQIEGPEGCNLFIYHLPQEFTDTDLASTFLPFGNVISAK
VFIDKQTSLSKCFGFVSFDNPDSAQVAIKAMNGFQVGTKRLKVQLKKPKD
SKPY*

LD29068.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:08:07
Subject Length Description Subject Range Query Range Score Percent Strand
aret-PE 604 CG31762-PE 1..604 1..604 3073 100 Plus
aret-PA 604 CG31762-PA 1..604 1..604 3073 100 Plus
aret-PF 620 CG31762-PF 1..620 1..604 3033 97.3 Plus
aret-PG 810 CG31762-PG 235..810 29..604 2930 100 Plus
aret-PB 810 CG31762-PB 235..810 29..604 2930 100 Plus