BDGP Sequence Production Resources |
Search the DGRC for LD29083
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 290 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | gny-RA |
Protein status: | LD29083.pep: gold |
Preliminary Size: | 2846 |
Sequenced Size: | 2563 |
Gene | Date | Evidence |
---|---|---|
CG5091 | 2001-01-01 | Release 2 assignment |
CG5096 | 2001-01-01 | Release 2 assignment |
CG5091 | 2001-07-04 | Blastp of sequenced clone |
CG5091 | 2008-04-29 | Release 5.5 accounting |
CG5091 | 2008-08-15 | Release 5.9 accounting |
CG5091 | 2008-12-18 | 5.12 accounting |
2563 bp (2563 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051761
> LD29083.complete CATCGCTGAAAAATGTTGGCAAAACAAAAAGATGAGATCCGAAATTTTGG CAAGCGCCTTTTTGGGCCTGGCGGTTAGGTCGATTATCTCGCTGTACTCC TACTCCGGCTTCGATTCCCCGCCGATGCATGGCGACTACGAGGCCCAGCG CCACTGGCAAGAGATCACGGTCAATCTGGCAGTGGGGGAATGGTACACAA ACAGCTCCAACAACGATCTTCAGTACTGGGGCCTGGATTATCCGCCTCTG ACGGCCTACCACAGCTATTTGGTGGGTCGCATAGGAGCATCCATTGACCC CCGCTTCGTCGAGCTGCACAAGAGCAGGGGATTCGAGTCGAAGGAGCACA AACGCTTCATGCGCGCAACAGTTGTTTCTGCTGACGTGCTCATCTATTTG CCGGCAATGTTGTTGCTGGCCTATTCCCTAGATAAAGCCTTTCGAAGCGA TGATAAATTGTTCCTATTCACGCTGGTGGCCGCGTATCCCGGACAAACAC TCATCGACAATGGACACTTTCAGTATAATAATATATCACTGGGCTTTGCC GCCGTGGCAATTGCCGCAATCTTGCGAAGAAGATTCTACGCGGCTGCATT TTTCTTCACTTTAGCCCTTAATTATAAGCAAATGGAGCTGTATCACAGCT TGCCGTTCTTTGCGTTCCTTCTGGGTGAATGTGTAAGCCAAAAAAGCTTT GCTTCTTTTATCGCTGAAATCTCACGGATAGCAGCCGTTGTCTTAGGAAC ATTTGCTATTTTATGGGTTCCTTGGTTGGGATCTCTGCAGGCCGTACTTC AAGTACTCCATCGCCTGTTTCCTGTCGCCCGAGGAGTTTTTGAGGACAAG GTGGCCAATGTTTGGTGTGCCGTCAACGTAGTTTGGAAACTAAAGAAGCA TATCAGCAATGACCAAATGGCCCTTGTGTGCATTGCATGCACGTTAATTG CATCTTTGCCAACAAATGTACTACTCTTTCGAAGGCGAACTAATGTCGGA TTTCTATTAGCGCTTTTCAACACGAGCCTGGCATTCTTCTTGTTTTCATT TCAAGTGCACGAGAAGACCATTTTGCTGACTGCTTTACCAGCACTTTTCC TACTTAAGTGCTGGCCCGACGAAATGATTTTATTTCTGGAAGTTACCGTA TTCAGCATGTTGCCTCTTCTAGCAAGAGATGAATTGTTGGTGCCCGCCGT AGTGGCCACTGTGGCTTTTCATTTGATATTCAAATGTTTTGATTCAAAGT CGAAGCTCAGCAACGAATATCCACTGAAGTACATTGCAAATATATCGCAG ATTCTGATGATCAGTGTTGTGGTTGCTTCTCTGACCGTTCCGGCACCTAC AAAGTATCCAGATCTTTGGCCCCTTATTATTTCGGTTACAAGCTGTGGAC ACTTCTTCTTGTTTTTCTTGTGGGGAAATGTTCAACAATTTAGCAGCAAG TTAAGTTAGTTTCTAAGATAAGCATTCCATAACAATATCTACAACATAAG CCAAAGAAATGTTTGTAAGCCCTTTATCGAGTCTTGTTTTATTTTGTGCC AATTATGTTTAATTTAAGCAGTTAATTCAAGGTGAAATAAGGTATTTGGG TATAAATGGCTTAGTCACTTCCAATACTCTTATAGCCCTTTTCCCGTATC TTATCATGGATTTAATCAGCGTATAGTGTCTACACTATGCACAAAGGGTA CTAGTGTGGATATAAACCAAAATAATTCAGAATTAATATTGTAAAAAGAT TCACTTGCTTAAAATATGTGAATTTTGGTTTTAATCTTATTGAATTTAAT TTTAACGCATTTCGAAAGTCGAATGACCCACAAAAGCGACTATTTTGTTG GATAGTGTATCAATGCTTTTGAAGAGATAAGATAAGATAACTCGTGAAAT ATTAGGTGAATAATATGTGGGGTTTTGTTCATTGTGCTCTTGTTAGTTAT GTACAGTTAATCGATCGGTGAACACGCCTATAGTTCAATTTTAGTTGGCA AAAGAATTTTGAGAACTATGAATTTAACAAAATCAGCTACGTTAGCTGCT GCGATTTTTTGTATCGTTTTGAGCCAAGTTTCTGGGCAGACGAAAGATGA AACCACCACAACCGAGACGCCAAAGGTACCACATAAAGTGTTTAATTTTT AATTTTCTGAAATTGGTGTGGGTGTGCGTATTACGAATGCAATTGTAAAC TGAATAATAAAGCCGATTACATTACCAATGGAATTGATACATATAGTTAG ATTTCAAATATCATTTGTGCAACTTAACTAAAAAGATATGTGCATACTGC TGTAAATTAGTGAACAGATTATGTTAAATTGTGTTAAATATTTGTGAAAG TAATAGAATGACTAAATTATATGTATCACTATCAAATTCGTGATAAGAAA AAGTCTTGCAAAGCTAAATCGATAAAGATGACTCAAAGAAAGACCGAAAA ATTCACCACACAAAAAATTTAAAAAAAAATGAGAACAGTGTGTAATATAA ATAAGTTGTTTAAAAATCGCAATAAAATTTAATTTAATTTCTAAAAAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 10380237..10381724 | 1055..2542 | 7440 | 100 | Plus |
chr2L | 23010047 | chr2L | 10378978..10379673 | 1..696 | 3450 | 99.7 | Plus |
chr2L | 23010047 | chr2L | 10379771..10379971 | 695..895 | 990 | 99.5 | Plus |
chr2L | 23010047 | chr2L | 10380023..10380184 | 895..1056 | 810 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10381377..10382865 | 1055..2543 | 7445 | 100 | Plus |
2L | 23513712 | 2L | 10380118..10380813 | 1..696 | 3480 | 100 | Plus |
2L | 23513712 | 2L | 10380911..10381111 | 695..895 | 1005 | 100 | Plus |
2L | 23513712 | 2L | 10381163..10381324 | 895..1056 | 810 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 10381377..10382865 | 1055..2543 | 7445 | 100 | Plus |
2L | 23513712 | 2L | 10380118..10380813 | 1..696 | 3480 | 100 | Plus |
2L | 23513712 | 2L | 10380911..10381111 | 695..895 | 1005 | 100 | Plus |
2L | 23513712 | 2L | 10381163..10381324 | 895..1056 | 810 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 697..804 | 2422..2532 | 134 | 59.5 | Plus |
gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 2892..3003 | 1699..1812 | 124 | 59.1 | Plus |
Doc2-element | 4789 | Doc2-element DOC2 4789bp | 3762..3830 | 1933..1866 | 117 | 65.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 10380237..10381724 | 1055..2542 | 100 | Plus | |
chr2L | 10378978..10379673 | 1..696 | 99 | -> | Plus |
chr2L | 10379773..10379970 | 697..894 | 99 | -> | Plus |
chr2L | 10380023..10380182 | 895..1054 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5091-RA | 1..1428 | 32..1459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5091-RA | 1..1428 | 32..1459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gny-RA | 1..1428 | 32..1459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5091-RA | 1..1428 | 32..1459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gny-RA | 1..1428 | 32..1459 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5091-RA | 1..2542 | 1..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5091-RA | 1..2542 | 1..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gny-RA | 16..2557 | 1..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5091-RA | 1..2542 | 1..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
gny-RA | 16..2557 | 1..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10380118..10380813 | 1..696 | 100 | -> | Plus |
2L | 10380913..10381110 | 697..894 | 100 | -> | Plus |
2L | 10381163..10381322 | 895..1054 | 100 | -> | Plus |
2L | 10381377..10382864 | 1055..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10380118..10380813 | 1..696 | 100 | -> | Plus |
2L | 10380913..10381110 | 697..894 | 100 | -> | Plus |
2L | 10381163..10381322 | 895..1054 | 100 | -> | Plus |
2L | 10381377..10382864 | 1055..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10380118..10380813 | 1..696 | 100 | -> | Plus |
2L | 10380913..10381110 | 697..894 | 100 | -> | Plus |
2L | 10381163..10381322 | 895..1054 | 100 | -> | Plus |
2L | 10381377..10382864 | 1055..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 10380118..10380813 | 1..696 | 100 | -> | Plus |
arm_2L | 10380913..10381110 | 697..894 | 100 | -> | Plus |
arm_2L | 10381163..10381322 | 895..1054 | 100 | -> | Plus |
arm_2L | 10381377..10382864 | 1055..2542 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 10380118..10380813 | 1..696 | 100 | -> | Plus |
2L | 10380913..10381110 | 697..894 | 100 | -> | Plus |
2L | 10381163..10381322 | 895..1054 | 100 | -> | Plus |
2L | 10381377..10382864 | 1055..2542 | 100 | Plus |
Translation from 0 to 1458
> LD29083.hyp IAEKCWQNKKMRSEILASAFLGLAVRSIISLYSYSGFDSPPMHGDYEAQR HWQEITVNLAVGEWYTNSSNNDLQYWGLDYPPLTAYHSYLVGRIGASIDP RFVELHKSRGFESKEHKRFMRATVVSADVLIYLPAMLLLAYSLDKAFRSD DKLFLFTLVAAYPGQTLIDNGHFQYNNISLGFAAVAIAAILRRRFYAAAF FFTLALNYKQMELYHSLPFFAFLLGECVSQKSFASFIAEISRIAAVVLGT FAILWVPWLGSLQAVLQVLHRLFPVARGVFEDKVANVWCAVNVVWKLKKH ISNDQMALVCIACTLIASLPTNVLLFRRRTNVGFLLALFNTSLAFFLFSF QVHEKTILLTALPALFLLKCWPDEMILFLEVTVFSMLPLLARDELLVPAV VATVAFHLIFKCFDSKSKLSNEYPLKYIANISQILMISVVVASLTVPAPT KYPDLWPLIISVTSCGHFFLFFLWGNVQQFSSKLS*
Translation from 31 to 1458
> LD29083.pep MRSEILASAFLGLAVRSIISLYSYSGFDSPPMHGDYEAQRHWQEITVNLA VGEWYTNSSNNDLQYWGLDYPPLTAYHSYLVGRIGASIDPRFVELHKSRG FESKEHKRFMRATVVSADVLIYLPAMLLLAYSLDKAFRSDDKLFLFTLVA AYPGQTLIDNGHFQYNNISLGFAAVAIAAILRRRFYAAAFFFTLALNYKQ MELYHSLPFFAFLLGECVSQKSFASFIAEISRIAAVVLGTFAILWVPWLG SLQAVLQVLHRLFPVARGVFEDKVANVWCAVNVVWKLKKHISNDQMALVC IACTLIASLPTNVLLFRRRTNVGFLLALFNTSLAFFLFSFQVHEKTILLT ALPALFLLKCWPDEMILFLEVTVFSMLPLLARDELLVPAVVATVAFHLIF KCFDSKSKLSNEYPLKYIANISQILMISVVVASLTVPAPTKYPDLWPLII SVTSCGHFFLFFLWGNVQQFSSKLS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15776-PA | 479 | GF15776-PA | 1..473 | 1..473 | 1850 | 72.9 | Plus |
Dana\GF21165-PA | 514 | GF21165-PA | 21..357 | 30..347 | 312 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10119-PA | 475 | GG10119-PA | 1..475 | 1..475 | 2285 | 89.9 | Plus |
Dere\GG19614-PA | 513 | GG19614-PA | 21..357 | 30..347 | 311 | 30.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13362-PA | 483 | GH13362-PA | 1..477 | 1..472 | 1540 | 61.8 | Plus |
Dgri\GH24530-PA | 509 | GH24530-PA | 27..390 | 35..378 | 283 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gny-PB | 475 | CG5091-PB | 1..475 | 1..475 | 2445 | 100 | Plus |
gny-PA | 475 | CG5091-PA | 1..475 | 1..475 | 2445 | 100 | Plus |
xit-PA | 511 | CG4542-PA | 21..498 | 30..472 | 367 | 28.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18289-PA | 474 | GI18289-PA | 1..474 | 1..471 | 1501 | 57.6 | Plus |
Dmoj\GI21610-PA | 515 | GI21610-PA | 27..401 | 35..388 | 279 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19144-PA | 475 | GL19144-PA | 1..471 | 1..473 | 1624 | 63.4 | Plus |
Dper\GL26756-PA | 492 | GL26756-PA | 30..406 | 35..388 | 317 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18653-PA | 475 | GA18653-PA | 1..471 | 1..473 | 1626 | 63.4 | Plus |
Dpse\GA18244-PA | 523 | GA18244-PA | 35..450 | 35..419 | 315 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18280-PA | 475 | GM18280-PA | 1..475 | 1..475 | 2430 | 96.4 | Plus |
Dsec\GM12534-PA | 511 | GM12534-PA | 21..401 | 30..388 | 323 | 30.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23688-PA | 410 | GD23688-PA | 1..410 | 1..475 | 1845 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15406-PA | 474 | GJ15406-PA | 1..474 | 1..471 | 1501 | 59.7 | Plus |
Dvir\GJ16548-PA | 513 | GJ16548-PA | 27..401 | 35..388 | 261 | 27.4 | Plus |