Clone LD29171 Report

Search the DGRC for LD29171

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:291
Well:71
Vector:pOT2
Associated Gene/TranscriptSec71-RA
Protein status:LD29171.pep: gold
Preliminary Size:5805
Sequenced Size:5826

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG7578 2001-01-01 Release 2 assignment
CG7578 2002-06-12 Blastp of sequenced clone
CG7578 2003-01-01 Sim4 clustering to Release 3
sec71 2008-04-29 Release 5.5 accounting
sec71 2008-08-15 Release 5.9 accounting
sec71 2008-12-18 5.12 accounting

Clone Sequence Records

LD29171.complete Sequence

5826 bp (5826 high quality bases) assembled on 2002-06-12

GenBank Submission: AY122171

> LD29171.complete
ACTTCTGATGACGTTTTTTCGTATTTTGAAGGGAATGTAAATGTGGAAAA
ACTGAGAGATTTGCAACATGCAAACATCCACGACACGCTAAAAACTCACC
GAGTGCCGCCACACGACAATCCAACCGAGAGGAGCACTCCGCACAGCTGG
CGGAGCACCCAGAAGGCAGCAGGCGAAAGTTGCGTGGCTGTTGTTTCCGG
AAGCGGTGGGCAGAGGGAAATCCGAAGCAGTGGTAGTAGGGAAAGAGGCA
TCGAAACCCACCCAGCGAAGGCGACCTTGGGAGTGGCAGCGGCCCAATAT
GCACAACAACTCCACAAAAACCAAGGAAATGTTCATCGTGCGTGCTCTAG
AAAAGATCCTTGCCGATAAGGACATACGGCGCTCCCATCACTCGCAGCTG
AAGAAGTCCTGCGATTCGGCGCTGGAGCAGATTAAGGCGGAGCTAATCAG
TGCCGGCCAGATCGCAGAGGGCAATGAGCTGCCCTGTGCCGCACTCCCGC
TGCCCAAGAATGATGCAGCGAGCATCATAAATGCGGAGACCTACTTTCTC
CCCTTCGAGCTTGCCTGCAAGAGCCGCTCGCCCAGGATCGTGGTCACCGC
ACTGGACTGCCTGCAGAAACTCATTGCCTATGGCCATTTGACAGGATCCA
TTCAGGACTCGGCCAATCCGGGTCACCTGCTCATCGACCGTATCGTTGTG
ACCATATATGGCTGCTTCAGTGGTCCCCAGACGGACGAGGCCGTCCAACT
GCAGATAATAAAGGCTCTGCTCACGGTGGTCACCTCGCAGCATGTGGAAA
TCCATGAATTCACACTGCTGCAAGCTGTGCGCACCTGCTACGACATCTAT
TTGTCCAGCAAGAACCTGGTCAATCAGACCACAGCACGCGCTACGCTCAC
CCAAATGTTGAACGTGATATTTGCCCGCATGGAGAATCAAGTGTACGAGC
TACCACCTCCCAATTCCAATCCCACCAACGGCAGCATCCACTCGGAGGAT
TGCAATGGCTCGGGAGAGGAGTCGCTGCGGGATTCCGACGAAGTAATTGC
CTCGGAACTGCTGGCGGAGATCATATCAGCTGCCTACAATGAGGCGATGA
AGGATCAGGAATCGGTCGGTGAGCCAGAGCCAACACTTAATGGAAACGAC
TACTCCTCGCACTCGGATCACGACAGTGTGGAGCTGCACAGCGAAAACGA
TGCGGTTGTAACGGCTAAGTTTACGCACATCCTGCAGAAAGATGCTTTTC
TCGTGTTCCGGGCACTGTGCAAGCTATCGATGAAGCCTTTGCCGGATGGA
CATCCAGATCCGAAATCGCACGAGCTGCGTTCCAAGGTGCTGTCATTGCA
TCTGCTGCTGCTCATCCTCCAGAATGCCGGGCCCGTCTTCCGCTCCAACG
AGATGTTCATCATGGCCATTAAGCAGTACCTGTGCGTGGCCTTGTCAAAC
AACGGAGTCAGTCTGGTGCCGGAGGTCTTCGAGCTGTCGCTTTCAATCTT
CGTTGCCCTACTCTCGAACTTCAAGGTGCATCTTAAGCGGCAGATAGAGG
TGTTCTTCAAGGAAATCTTCCTAAACATTCTTGAGGCGAACTCAAGCAGC
TTCGAGCACAAATGGATGGTAATCCAAGCGCTGACACGTATTTGTGCTGA
CGCCCAGTCCGTGGTGGATATCTATGTTAATTACGATTGCGACTTTTCGG
CTGCAAACCTTTTTGAGAGACTGGTCAACGATCTTTCGAAAATTGCCCAG
GGTCGTCAGGCTCTCGAACTGGGCGCCAATCCGATGCAAGAGAAATCGAT
GCGCATTCGCGGCCTGGAGTGTCTTGTCTCCATTCTTAAGTGCATGGTAG
AGTGGAGTAAGGACTTGTATGTTAATCCAAACATGCCGGTTCCACCTATG
CAAGTCCAATCGCCGACAAGCACTGAGCAGGATCAGGCGGACACAACTAT
CCAAACGATGCACAGTGGTTCCAGTCATAGTTTGAACTCCAATCAGGAGC
AACTACAGGATCTTCCCGAGGCATTGGAGGAGCGCAAGATGCGCAAGGAA
GTGATGGAAACAGGCATTGAGTTATTCAATCGTAAGCCTCAGAAAGGAGT
GCAATTCCTGCAGGAGAAGCAGTTGCTGGGTGCCACATGCGGGGACATTG
CGCGCTGGCTGCACGAGGACGAACGACTGGACAAGACAGTGATCGGAAAC
TACATTGGCGAGAATGACGACCACTCCAAGGAAGTGATGTGCGCTTACAT
CGATGCCTTTGACTTTCGCCAAATGGAGGTGGTGGCCGCCTTGAGATTTC
TTCTCGAGGGGTTCCGCCTGCCAGGAGAAGCACAAAAAATCGATCGGCTG
ATGGAGAAGTTCGCCAGTAGATACTGCGAATGCAATCCGAAGAACCAGCT
ATTCCAAAGCGCAGACACCGTCTACGTGCTGGCATTCAGCATCATTATGC
TGACCACGGATCTTCATTCGCCGCAGGTCAAGCACAAGATGACCAAGGAG
CAGTACATTAAAATGAACCGCGGCATCAGCGACAGCAAGTCCGATTTGCC
CGAGGAGTACTTGTCGTCCATCTACGACGAGATTTCTGAACACGAAATTA
AGATGAAGAACAACTCCGGTATGCTTCAACAGGCGAAACCCACTGGAAAG
CAGGCCTTCATAACGGAGAAACGCAGAAAGCTGTTGTGGAACATGGAGAT
GGAGGTCATCTCGCTGACGGCCACCAATCTAATGCAGTCAGTTTCGCACG
TCAAGTCACCCTTCACCTCAGCGAAACACTTGGAGCATGTCCGGCCCATG
TTCAAAATGGCTTGGACACCATTTCTGGCCGCTTTCTCTGTGGGTCTCCA
GGACTGCGACGATCCTGAGATTGCTACACTCTGCTTGGATGGTATACGTT
GTGCTATTCGAATCGCATGCATCTTCCACATGTCCCTGGAGCGAGATGCC
TATGTACAAGCCCTGGCCAGGTTTACTCTCCTGAATGCTAACTCGCCCAT
CAACGAAATGAAGGCCAAGAATATCGATACCATCAAGACGCTTATAATGG
TAGCCCACACGGATGGCAATTATCTGGGCAGCAGCTGGCTGGATATAGTG
AAGTGCATTAGCCAGTTGGAGCTGGCCCAACTGATCGGCACTGGGGTGCG
GCCCCAGTTTCTTTCTGGAGCGCAGACAACGCTCAAGGACTCGCTTAATC
CCAGCGTGAAAGAACACATCGGCGAGACGAGCAGCCAGAGCGTGGTGGTC
GCAGTCGATCGTATTTTCACCGGCTCAATGCGACTGGATGGCGATGCTAT
CGTGGACTTCGTGAAGGCCCTGTGCCAGGTGTCTGTGGATGAGCTTCAGC
AGCAGCAACCGAGGATGTTCTCCTTGCAAAAGATAGTGGAAATTAGTTAC
TACAACATGGAGCGTATTCGTCTGCAGTGGTCACGCATTTGGCAAGTTTT
GGGTGAGCACTTTAACGCGGTCGGATGCAATAGCAACGAGGAGATCTCAT
TTTTCGCCCTGGACTCACTGCGTCAGTTGTCGATGAAGTTCATGGAGAAG
GGCGAGTTCAGTAATTTCCGCTTCCAGAAGGATTTCCTGCGTCCCTTTGA
GCATATCATGAAGAAAAACGCATCGCCGGCAATACGAGATATGGTGGTGC
GCTGCATTGCCCAGATGGTAAACTCACAGGCGCATAACATCCGTTCCGGC
TGGAAGAATATCTTTAGCATTTTCCACCTGGCAGCGGGAGACAACGAAGA
GCCAATTGTGGAGCTGGCCTTCCAAACCACGGGCAAAATCATCGGTGATC
TGTACAAGCGTCAGTTCGCCATTATGGTGGACTCGTTCCAGGATGCGGTC
AAGTGCCTGTCAGAGTTCGCCACCGCCAGATTCCCCGATACCAGCATGGA
AGCCATACGTCTGGTCCGTACCTGCGCGCAGTGCGTCCACGAGGCACCAC
AACTGTTTGCGGAGCATGCCGGCATGGAGAACGACGCCTCGGTGGCCGAG
GAGGATCGAGTCTGGGTGCGCGGCTGGTTTCCGATGCTATTCTCGCTTTC
CTGCGTGGTCAATCGCTGCAAATTGGATGTGCGTACTCGCGCCTTAACCG
TGCTTTTTGAGATTGTGAAGACGTATGGTGAGAGCTTCAAGCCCCATTGG
TGGAAGGATCTCTTCAATGTGATCTTCCGTATCTTCGACAACATGAAATT
GCCGGAGCACGTCACCGAGAAGTCCGAATGGATGACGACCACATGCAACC
ACGCCTTGTACGCTATTATTGATGTCTTCACGCAGTATTTCGATGTTCTT
GGTCATCTGCTGCTGGAGGAGCTCTTCGCCCAGCTGCATTGGTGTGTTCA
GCAGAGTAACGAGCAGTTGGCGCGATCTGGCACCAATTGCCTGGAGAACC
TCGTCATTTCGAATGGATTCAAGTTCAACGAGTCCACCTGGGACAAGACG
TGCCAGTGCATCCTGGACATCTTCAACGCCACTTTGCCGCAGGATCTCCT
CAGTTGGCGGCCGAAAGCACATTCCAGTAACAATATACCCCAGGAGCACA
ACCACTTTGAGGCGCTGCATATCCGCTGCGTAGTCCAGCTGGAACTGATA
CAGACCATGGATAACATTGTCTTTTTCCCGGCCACGTCGCGCAAGGAGGA
TGCCGAAACGCTGGCCCAGGCGGCGGCAGACTTAACAGGCGGCAGGAGCG
GTTCGCAGTCGCAGCTGCTGGAGTGCCAGCGGGAGGAGCAGGGAATGTAC
GGCTATCTGAGAACCCGCCAGCTGCTCACCCTGGCCGACTGTCTGATGCA
GTCGCACCGTTTTGCCAAGCGCTTCAACGCCGATCACGACCAACGCAGCC
TGCTTTGGCGGGCGGGATTCAAGGGATCTGTTAAACCGAATCTGCTGAAG
CAGGAGACCTCGTCGCTGGCCTGCGTCCTGCGCATTTTCTTCAAGATGTA
CGGCGACGAGAATAGACGCAGCGATTGGCCCGGCATCGAGCAGGAACTGG
TGCAGGTCTGCAAGGAGGCACTGGGCTACTATTTGAGTTTGCAGAGCGAG
GCACACCGAGATGCGTGGACATCGCTGCTGCTGCTCATCCTGACGCGCCT
GCTCAAGATGTCCGATGCCAGGTTCGCCACCCACGTTTCCAACTACTACA
GCCTGCTGTGCGAGATGATGTGCTTCGACCTCAAGCCCGAACTGAGAAGT
GTCCTTAGGCGTGTGTTCATGCGCATCGGTCCAGTATTCAATATAATGAG
CGTTAAATAGTCACGGAGGAGCCGCAGCCACCTGGCTAGCTGACTCGGCC
ATGTTAATAGATCGATTCCCGATCCACCCGAAATCCCCTCAAATCGTAGT
TCATAGTGGGCCCTCTGGTTCCCTCGGCTTTGTTGTTATGTTGGCACTTA
ATCATTCATACAAGTATATATATTTTTATTATATTTATAAACAATACATA
GTCAGAATGTAATGTTTACTAGGTTTAACGAGAAATGTTGTTGTTTTTAT
ATATATATATAAATATATATATATATATATATGTATATGTATATGCATAT
GTACATACCCCTGGGTATGCTATGTAAGGCTTTAACGTGTGCGTGTGTAT
AGTTTCCTTCAGTTACGAATTTGGATTTTGTTTCCCCGGTGTAACATTCA
CCCACTATCGATTAGTGTGTAGCGTAGATTAATGGATTAAACCAGCATTG
TGCGCCGCCTGTATATTGCTAGTGTTAATTTAAATCAAAATCTATATATA
AATATATATATTTCAAATATACAATATAAATCTATTACCAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAA

LD29171.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:23:29
Subject Length Description Subject Range Query Range Score Percent Strand
sec71-RA 5861 sec71-RA 43..5833 1..5791 28955 100 Plus
sec71-RB 5717 sec71-RB 16..5020 1..5005 25025 100 Plus
sec71-RB 5717 sec71-RB 5020..5689 5122..5791 3350 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 21:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13793604..13797650 1076..5122 20205 100 Plus
chr2L 23010047 chr2L 13792262..13793344 1..1083 5400 99.9 Plus
chr2L 23010047 chr2L 13797719..13798386 5122..5789 3310 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:22:07 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 21:53:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13794892..13798938 1076..5122 20235 100 Plus
2L 23513712 2L 13793550..13794632 1..1083 5400 99.9 Plus
2L 23513712 2L 13799007..13799676 5122..5791 3350 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:11:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13794892..13798938 1076..5122 20235 100 Plus
2L 23513712 2L 13793550..13794632 1..1083 5400 99.9 Plus
2L 23513712 2L 13799007..13799676 5122..5791 3350 100 Plus
2R 25260384 2R 13623414..13623473 5498..5557 240 93.3 Plus
Blast to na_te.dros performed 2019-03-16 21:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
flea 5034 flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). 4628..4712 4139..4227 130 62.9 Plus
Dtak\R1A2 1753 Dtak\R1A2 TAKR1A2 1753bp 624..688 2038..1969 123 67.1 Minus

LD29171.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 21:54:28 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13792262..13793340 1..1079 100 -> Plus
chr2L 13793608..13797650 1080..5122 99 -> Plus
chr2L 13797720..13798094 5123..5497 92 == Plus
chr2L 13798155..13798321 5558..5724 100 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:09:17 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
sec71-RA 1..4962 299..5260 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:48:06 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
sec71-RA 1..4962 299..5260 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:07:35 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
Sec71-RA 1..4962 299..5260 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 13:41:55 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
sec71-RA 1..4962 299..5260 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:36:08 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
Sec71-RA 1..4962 299..5260 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 16:33:22 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
sec71-RA 4..5792 1..5789 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:48:06 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
sec71-RA 4..5792 1..5789 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:07:35 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
Sec71-RA 30..5818 1..5789 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 13:41:55 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
sec71-RA 4..5792 1..5789 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:36:08 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
Sec71-RA 30..5818 1..5789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:54:28 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13793550..13794628 1..1079 100 -> Plus
2L 13794896..13798938 1080..5122 100 -> Plus
2L 13799008..13799674 5123..5789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:54:28 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13793550..13794628 1..1079 100 -> Plus
2L 13794896..13798938 1080..5122 100 -> Plus
2L 13799008..13799674 5123..5789 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 21:54:28 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13793550..13794628 1..1079 100 -> Plus
2L 13794896..13798938 1080..5122 100 -> Plus
2L 13799008..13799674 5123..5789 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:07:35 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13793550..13794628 1..1079 100 -> Plus
arm_2L 13794896..13798938 1080..5122 100 -> Plus
arm_2L 13799008..13799674 5123..5789 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:33:31 Download gff for LD29171.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13793550..13794628 1..1079 100 -> Plus
2L 13794896..13798938 1080..5122 100 -> Plus
2L 13799008..13799674 5123..5789 100   Plus

LD29171.pep Sequence

Translation from 298 to 5259

> LD29171.pep
MHNNSTKTKEMFIVRALEKILADKDIRRSHHSQLKKSCDSALEQIKAELI
SAGQIAEGNELPCAALPLPKNDAASIINAETYFLPFELACKSRSPRIVVT
ALDCLQKLIAYGHLTGSIQDSANPGHLLIDRIVVTIYGCFSGPQTDEAVQ
LQIIKALLTVVTSQHVEIHEFTLLQAVRTCYDIYLSSKNLVNQTTARATL
TQMLNVIFARMENQVYELPPPNSNPTNGSIHSEDCNGSGEESLRDSDEVI
ASELLAEIISAAYNEAMKDQESVGEPEPTLNGNDYSSHSDHDSVELHSEN
DAVVTAKFTHILQKDAFLVFRALCKLSMKPLPDGHPDPKSHELRSKVLSL
HLLLLILQNAGPVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSI
FVALLSNFKVHLKRQIEVFFKEIFLNILEANSSSFEHKWMVIQALTRICA
DAQSVVDIYVNYDCDFSAANLFERLVNDLSKIAQGRQALELGANPMQEKS
MRIRGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQSPTSTEQDQADTT
IQTMHSGSSHSLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKG
VQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAY
IDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQ
LFQSADTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDL
PEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRKLLWNME
MEVISLTATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTPFLAAFSVGL
QDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANSP
INEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTGV
RPQFLSGAQTTLKDSLNPSVKEHIGETSSQSVVVAVDRIFTGSMRLDGDA
IVDFVKALCQVSVDELQQQQPRMFSLQKIVEISYYNMERIRLQWSRIWQV
LGEHFNAVGCNSNEEISFFALDSLRQLSMKFMEKGEFSNFRFQKDFLRPF
EHIMKKNASPAIRDMVVRCIAQMVNSQAHNIRSGWKNIFSIFHLAAGDNE
EPIVELAFQTTGKIIGDLYKRQFAIMVDSFQDAVKCLSEFATARFPDTSM
EAIRLVRTCAQCVHEAPQLFAEHAGMENDASVAEEDRVWVRGWFPMLFSL
SCVVNRCKLDVRTRALTVLFEIVKTYGESFKPHWWKDLFNVIFRIFDNMK
LPEHVTEKSEWMTTTCNHALYAIIDVFTQYFDVLGHLLLEELFAQLHWCV
QQSNEQLARSGTNCLENLVISNGFKFNESTWDKTCQCILDIFNATLPQDL
LSWRPKAHSSNNIPQEHNHFEALHIRCVVQLELIQTMDNIVFFPATSRKE
DAETLAQAAADLTGGRSGSQSQLLECQREEQGMYGYLRTRQLLTLADCLM
QSHRFAKRFNADHDQRSLLWRAGFKGSVKPNLLKQETSSLACVLRIFFKM
YGDENRRSDWPGIEQELVQVCKEALGYYLSLQSEAHRDAWTSLLLLILTR
LLKMSDARFATHVSNYYSLLCEMMCFDLKPELRSVLRRVFMRIGPVFNIM
SVK*

LD29171.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 23:48:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14256-PA 1656 GF14256-PA 2..1656 1..1653 8574 95.8 Plus
Dana\GF14420-PA 410 GF14420-PA 68..267 571..774 453 46.1 Plus
Dana\GF12843-PA 1743 GF12843-PA 357..998 298..940 428 24.6 Plus
Dana\GF24294-PA 1307 GF24294-PA 754..975 581..796 359 38.1 Plus
Dana\GF15133-PA 1692 GF15133-PA 653..1049 907..1300 207 22.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 23:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23880-PA 1653 GG23880-PA 1..1653 1..1653 8861 99 Plus
Dere\GG21479-PA 751 GG21479-PA 409..608 571..774 456 45.6 Plus
Dere\GG20274-PA 1980 GG20274-PA 300..991 247..940 397 24.2 Plus
Dere\GG16158-PA 1310 GG16158-PA 754..975 581..796 360 38.6 Plus
Dere\GG11149-PA 1341 GG11149-PA 886..1048 617..780 214 29.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 23:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11113-PA 1709 GH11113-PA 1..1702 1..1652 7926 89.4 Plus
Dgri\GH11296-PA 409 GH11296-PA 68..266 571..774 459 46.1 Plus
Dgri\GH23159-PA 1944 GH23159-PA 396..991 349..940 413 25.2 Plus
Dgri\GH14566-PA 1342 GH14566-PA 778..999 581..796 358 38.1 Plus
Dgri\GH23300-PA 717 GH23300-PA 232..374 617..762 195 28.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:44
Subject Length Description Subject Range Query Range Score Percent Strand
Sec71-PA 1653 CG7578-PA 1..1653 1..1653 8557 100 Plus
step-PA 410 CG11628-PA 68..267 571..774 448 45.6 Plus
step-PE 727 CG11628-PE 385..584 571..774 448 45.6 Plus
step-PD 727 CG11628-PD 385..584 571..774 448 45.6 Plus
step-PC 727 CG11628-PC 385..584 571..774 448 45.6 Plus
garz-PA 1740 CG8487-PA 300..998 247..946 433 24.1 Plus
garz-PC 1741 CG8487-PC 300..998 247..946 433 24.1 Plus
garz-PB 1983 CG8487-PB 300..998 247..946 433 24.1 Plus
siz-PC 1210 CG32434-PC 650..871 581..796 350 38.6 Plus
siz-PD 1220 CG32434-PD 660..881 581..796 350 38.6 Plus
siz-PA 1313 CG32434-PA 753..974 581..796 350 38.6 Plus
siz-PB 1325 CG32434-PB 765..986 581..796 350 38.6 Plus
Efa6-PC 1387 CG31158-PC 932..1094 617..780 221 29.5 Plus
Efa6-PG 1402 CG31158-PG 932..1094 617..780 221 29.5 Plus
Efa6-PD 1521 CG31158-PD 1066..1228 617..780 221 29.5 Plus
Efa6-PI 1554 CG31158-PI 1066..1228 617..780 221 29.5 Plus
Efa6-PH 1601 CG31158-PH 1146..1308 617..780 221 29.5 Plus
mon2-PC 1684 CG8683-PC 634..1049 894..1300 204 21.3 Plus
mon2-PB 1684 CG8683-PB 634..1049 894..1300 204 21.3 Plus
CG5937-PD 2051 CG5937-PD 1003..1171 995..1139 166 24.3 Plus
CG5937-PC 2051 CG5937-PC 1003..1171 995..1139 166 24.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 23:48:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI18236-PA 1710 GI18236-PA 1..1707 1..1652 7935 89.1 Plus
Dmoj\GI24617-PA 409 GI24617-PA 68..266 571..774 457 46.1 Plus
Dmoj\GI18338-PA 2043 GI18338-PA 399..992 349..940 440 25.8 Plus
Dmoj\GI13893-PA 1288 GI13893-PA 730..951 581..796 361 38.1 Plus
Dmoj\GI22453-PA 1701 GI22453-PA 672..1068 907..1300 209 21.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 23:48:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21229-PA 1644 GL21229-PA 1..1644 1..1653 8154 93.6 Plus
Dper\GL26126-PA 410 GL26126-PA 68..267 571..774 442 45.6 Plus
Dper\GL10064-PA 508 GL10064-PA 120..341 581..796 362 38.6 Plus
Dper\GL14121-PA 270 GL14121-PA 5..226 581..796 359 38.6 Plus
Dper\GL26865-PA 973 GL26865-PA 416..637 581..796 354 38.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 23:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20452-PA 1644 GA20452-PA 1..1644 1..1653 8322 95.2 Plus
Dpse\GA11107-PA 410 GA11107-PA 68..267 571..774 442 45.6 Plus
Dpse\GA23806-PA 1334 GA23806-PA 763..984 581..796 362 38.6 Plus
Dpse\GA21111-PA 1997 GA21111-PA 649..1006 574..940 344 28.9 Plus
Dpse\GA16450-PA 1722 GA16450-PA 661..1057 907..1300 206 22.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 23:48:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15214-PA 1653 GM15214-PA 1..1653 1..1653 8920 99.8 Plus
Dsec\GM21360-PA 1981 GM21360-PA 371..992 319..940 399 25.2 Plus
Dsec\GM16129-PA 245 GM16129-PA 68..221 571..727 372 47.1 Plus
Dsec\GM22340-PA 1309 GM22340-PA 751..972 581..796 360 38.6 Plus
Dsec\GM26448-PA 1323 GM26448-PA 869..1031 617..780 216 29.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 23:48:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23923-PA 1622 GD23923-PA 1..1622 1..1653 8333 94.7 Plus
Dsim\GD21629-PA 594 GD21629-PA 252..451 571..774 458 45.6 Plus
Dsim\GD14932-PA 1309 GD14932-PA 751..972 581..796 360 38.6 Plus
Dsim\GD10856-PA 1202 GD10856-PA 80..449 562..940 334 27.3 Plus
Dsim\GD22441-PA 1678 GD22441-PA 634..1043 894..1300 191 20.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 23:48:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18143-PA 1714 GJ18143-PA 1..1707 1..1652 7993 89.3 Plus
Dvir\GJ16405-PA 409 GJ16405-PA 68..266 571..774 457 46.1 Plus
Dvir\GJ19764-PA 1749 GJ19764-PA 321..998 269..940 442 25.8 Plus
Dvir\GJ11748-PA 1271 GJ11748-PA 712..933 581..796 358 38.1 Plus
Dvir\GJ20346-PA 1699 GJ20346-PA 654..1069 894..1300 212 21.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 23:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24228-PA 1672 GK24228-PA 1..1672 1..1653 8054 92.4 Plus
Dwil\GK18706-PA 408 GK18706-PA 66..265 571..774 442 45.6 Plus
Dwil\GK22165-PA 1759 GK22165-PA 400..1000 349..940 420 24.6 Plus
Dwil\GK25417-PA 1335 GK25417-PA 776..997 581..796 363 38.6 Plus
Dwil\GK11304-PA 1396 GK11304-PA 941..1103 617..780 211 28.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 23:48:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18681-PA 1653 GE18681-PA 1..1653 1..1653 8863 99 Plus
Dyak\GE12980-PA 410 GE12980-PA 68..267 571..774 450 45.1 Plus
Dyak\GE12432-PA 1739 GE12432-PA 300..991 247..940 407 24.2 Plus
Dyak\GE19726-PA 493 GE19726-PA 3..158 646..796 266 41.4 Plus
Dyak\GE19727-PA 463 GE19727-PA 1..128 674..796 237 44.2 Plus

LD29171.hyp Sequence

Translation from 298 to 5259

> LD29171.hyp
MHNNSTKTKEMFIVRALEKILADKDIRRSHHSQLKKSCDSALEQIKAELI
SAGQIAEGNELPCAALPLPKNDAASIINAETYFLPFELACKSRSPRIVVT
ALDCLQKLIAYGHLTGSIQDSANPGHLLIDRIVVTIYGCFSGPQTDEAVQ
LQIIKALLTVVTSQHVEIHEFTLLQAVRTCYDIYLSSKNLVNQTTARATL
TQMLNVIFARMENQVYELPPPNSNPTNGSIHSEDCNGSGEESLRDSDEVI
ASELLAEIISAAYNEAMKDQESVGEPEPTLNGNDYSSHSDHDSVELHSEN
DAVVTAKFTHILQKDAFLVFRALCKLSMKPLPDGHPDPKSHELRSKVLSL
HLLLLILQNAGPVFRSNEMFIMAIKQYLCVALSNNGVSLVPEVFELSLSI
FVALLSNFKVHLKRQIEVFFKEIFLNILEANSSSFEHKWMVIQALTRICA
DAQSVVDIYVNYDCDFSAANLFERLVNDLSKIAQGRQALELGANPMQEKS
MRIRGLECLVSILKCMVEWSKDLYVNPNMPVPPMQVQSPTSTEQDQADTT
IQTMHSGSSHSLNSNQEQLQDLPEALEERKMRKEVMETGIELFNRKPQKG
VQFLQEKQLLGATCGDIARWLHEDERLDKTVIGNYIGENDDHSKEVMCAY
IDAFDFRQMEVVAALRFLLEGFRLPGEAQKIDRLMEKFASRYCECNPKNQ
LFQSADTVYVLAFSIIMLTTDLHSPQVKHKMTKEQYIKMNRGISDSKSDL
PEEYLSSIYDEISEHEIKMKNNSGMLQQAKPTGKQAFITEKRRKLLWNME
MEVISLTATNLMQSVSHVKSPFTSAKHLEHVRPMFKMAWTPFLAAFSVGL
QDCDDPEIATLCLDGIRCAIRIACIFHMSLERDAYVQALARFTLLNANSP
INEMKAKNIDTIKTLIMVAHTDGNYLGSSWLDIVKCISQLELAQLIGTGV
RPQFLSGAQTTLKDSLNPSVKEHIGETSSQSVVVAVDRIFTGSMRLDGDA
IVDFVKALCQVSVDELQQQQPRMFSLQKIVEISYYNMERIRLQWSRIWQV
LGEHFNAVGCNSNEEISFFALDSLRQLSMKFMEKGEFSNFRFQKDFLRPF
EHIMKKNASPAIRDMVVRCIAQMVNSQAHNIRSGWKNIFSIFHLAAGDNE
EPIVELAFQTTGKIIGDLYKRQFAIMVDSFQDAVKCLSEFATARFPDTSM
EAIRLVRTCAQCVHEAPQLFAEHAGMENDASVAEEDRVWVRGWFPMLFSL
SCVVNRCKLDVRTRALTVLFEIVKTYGESFKPHWWKDLFNVIFRIFDNMK
LPEHVTEKSEWMTTTCNHALYAIIDVFTQYFDVLGHLLLEELFAQLHWCV
QQSNEQLARSGTNCLENLVISNGFKFNESTWDKTCQCILDIFNATLPQDL
LSWRPKAHSSNNIPQEHNHFEALHIRCVVQLELIQTMDNIVFFPATSRKE
DAETLAQAAADLTGGRSGSQSQLLECQREEQGMYGYLRTRQLLTLADCLM
QSHRFAKRFNADHDQRSLLWRAGFKGSVKPNLLKQETSSLACVLRIFFKM
YGDENRRSDWPGIEQELVQVCKEALGYYLSLQSEAHRDAWTSLLLLILTR
LLKMSDARFATHVSNYYSLLCEMMCFDLKPELRSVLRRVFMRIGPVFNIM
SVK*

LD29171.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:32:27
Subject Length Description Subject Range Query Range Score Percent Strand
Sec71-PA 1653 CG7578-PA 1..1653 1..1653 8557 100 Plus
step-PA 410 CG11628-PA 68..267 571..774 448 45.6 Plus
step-PE 727 CG11628-PE 385..584 571..774 448 45.6 Plus
step-PD 727 CG11628-PD 385..584 571..774 448 45.6 Plus
step-PC 727 CG11628-PC 385..584 571..774 448 45.6 Plus