BDGP Sequence Production Resources |
Search the DGRC for LD29172
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 291 |
Well: | 72 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11905-RA |
Protein status: | LD29172.pep: gold |
Preliminary Size: | 2421 |
Sequenced Size: | 2191 |
Gene | Date | Evidence |
---|---|---|
CG11905 | 2001-09-19 | Blastp of sequenced clone |
CG11905 | 2008-04-29 | Release 5.5 accounting |
CG11905 | 2008-08-15 | Release 5.9 accounting |
CG11905 | 2008-12-18 | 5.12 accounting |
2191 bp (2191 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058597
> LD29172.complete TCGCCTGGCTCGCTGGCTCTTGGTTCTTGGTAGGAGTTCCATTTCCAGAC CCTATTTATTGTGCGTGACAAAAAAAAAGAAAGAAAAACAACGGAACCTG AAACAATCGTAAATTGAAAGCTCAGCAGGATTGGTTTTATAGTGCTTTTA GTTTCAAGGATATATTGTCAAGGCGAGGATTGGTCAACGCCACGAACACC AAGCATTTATTGAAAAATCTGAAACTATTCACCAGAACCTCGCGTTAAAA TGCGCTTTCTTGTTCTCTCAACACTGCTTCTGGCCTCTTTGGCACTTGGC CAGGCTCAACAGCACGGTGGACTGGCCGTCGAAATTCAGAAGCAGCGGCT GGTCAAATTTCCCGAGGACTTTGAGCCCAATGCGGCCACTCCGTCCTCGG AAAAGGCGGACGAGGCCAAGCGCATCCTCGAGCAGATAGCCAAGGTTAAC GAGGCCTTTGGCTACGTGAAGAAGCAGCCGGAGCAGCCCAAGCTGCCACC GATCCTTGATTCCAGTCAATACCTGTTCCCCAAGCCCGCCCATCAGCCAT TTCACGCCCATCAGCACCACTTCTCGGGAAGTAATGGTCAGACCTTGTTA GAACCCTCAATTAGGGCGGTGAAACTCACAAGAAATGTGGCGGGCAGTTA CAATGTGCCTCCCAGGTTGCGCCAGGCAATTGAGAGCACCTCCAAGGAGG AGAAGAAAGCGCAACTCTACTTCCGACCCAAACAGGTGGAGGTACCGAAG CCGAGTTCCGAACAAGAAGCACAGCAGCTGCCCGCCCACTTTGTGGTGCC CGTGCACCTGTACAAACTCAATAAGGAGGAGTATCTCAAGGAGCACGCCT CGCAGGAATACAAGATAAAGGGATACAAAATCATTGGCGATGTGGACAGC TTCTATGGCAAGGCGAAGGCTGGAAGAAAACAGGGCAAGACGACGCCCAA GTATCACCTGTTCTTCCTGCCCCGAGAACTGGCTCTCAATGAAGATGGCA CCCCAAAAAGGGGTAATTCCACCACCATTGGTACGACCACCACAAAGGCT CCAGTGCCTGTGAACTTCAAGGAATATCGTTTGGACTCCCGCGAGAAGCC CGTGCATAAGCCACAGAAGATTCAGCCCACTTCGTCACCGGAATTAAATT CTTTGAACAGAAAGAAGGTTGGTTCCACAGCGAAACCCGTTCGCTTGAGT GGAAAGGATGCTGAACAGCAAATCTACCAGGGATCCACATCCCTTAATAT CAAGGCTACATCTGCGCCTGTCCTGTTGAGTTCTACTTTACCACCATCTG GTGGCTTGCTGCCCAATCGGAATCGCTTAAGTCCATTCCGCATGCCCGGA ATGAATATAGCTGAGATGCAGAATCAGACCTCGACTGCCATCAAGAATGC CTTTCAAAACATTTTCAAGCTCCCCTTCCGACCTCCAATGGCGGCCACAG CTGGAGAAGGTCCTGTGGTTGTTGGCAATGTTCCTGTGAAGAATCACTCA ATCGATTCGATGGATTATAAATGGGAGGATGAAAACGAGGGCGCCGGCGA TGGGATGGCCGATGATGTGGATACCATTGAGAACACAGCCGCGGAACTGG ACAACAGTGCCTCCTCAGAGAAGCACTTGTTTGCTCACAAGGGCCATCAC CTGATGCACACTGTGAGCCAGGTGGCCACCGCTCAGGAAAGCACCCAAAA GCAGGCATTGCGCGAAGGAGGAATCATCATTCAGCGGCTAAAGGTTCGCA GGGGCGGCATCGCTATCGCAGGACCCGGGGGCGTGGCCACGGCGGGCAGC GGAGGAACGGCGATTGTTGGTCCCGGTGGCTATGCTCTCACCCATCCACG GAGTCTCACCATCGCCGGTCCCGGGGCCAAGGTGATCTCCATACCGGCAG ATGTGGACCTTAAAGATGCCCTGGCACGCACCGATCTGGAGACGAGAAGT TTTCCGCGAGAGGGAAAGATAGTGGCTACAGGACCAACGGTCTACTATGC TCCACCCACGGGCACAACAACCATGGAGGCGGATCAGGGGGCGGGGCTGG AGACGGGCCAGTTCGAGTCCTAATCCAGTTCGAGGCTTAAACCTAATAGC TATTATTTAGCACATTTAGTTAGGATCCATAGTTGGTATTGTCTAGTGTT CTAATAAATATTTGTATTTCGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11905-RA | 2214 | CG11905-RA | 8..2181 | 1..2174 | 10870 | 100 | Plus |
CG11905.b | 2880 | CG11905.b | 6..2179 | 1..2174 | 10870 | 100 | Plus |
CG11905.c | 2939 | CG11905.c | 217..2238 | 153..2174 | 10110 | 100 | Plus |
CG11905.c | 2939 | CG11905.c | 6..157 | 1..152 | 760 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 16920627..16922466 | 2172..333 | 9110 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 16924810..16924961 | 152..1 | 760 | 100 | Minus |
chr3L | 24539361 | chr3L | 16924645..16924756 | 264..153 | 545 | 99.1 | Minus |
chr3L | 24539361 | chr3L | 16922748..16922815 | 332..265 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 16931170..16933011 | 2174..333 | 9210 | 100 | Minus |
3L | 28110227 | 3L | 16935365..16935516 | 152..1 | 760 | 100 | Minus |
3L | 28110227 | 3L | 16935194..16935305 | 264..153 | 560 | 100 | Minus |
3L | 28110227 | 3L | 16933293..16933360 | 332..265 | 340 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 16924270..16926111 | 2174..333 | 9210 | 100 | Minus |
3L | 28103327 | 3L | 16928465..16928616 | 152..1 | 760 | 100 | Minus |
3L | 28103327 | 3L | 16928294..16928405 | 264..153 | 560 | 100 | Minus |
3L | 28103327 | 3L | 16926393..16926460 | 332..265 | 340 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 16924810..16924961 | 1..152 | 100 | Minus | |
chr3L | 16920627..16922466 | 333..2172 | 99 | <- | Minus |
chr3L | 16922748..16922815 | 265..332 | 100 | <- | Minus |
chr3L | 16924645..16924756 | 153..264 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RD | 1..1824 | 250..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RD | 1..1824 | 250..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RA | 1..1824 | 250..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RD | 1..1824 | 250..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RA | 1..1824 | 250..2073 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RA | 1..2172 | 1..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RA | 1..2172 | 1..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RA | 21..2192 | 1..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RA | 1..2172 | 1..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11905-RA | 21..2192 | 1..2172 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16931172..16933011 | 333..2172 | 100 | <- | Minus |
3L | 16933293..16933360 | 265..332 | 100 | <- | Minus |
3L | 16935194..16935305 | 153..264 | 100 | <- | Minus |
3L | 16935365..16935516 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16931172..16933011 | 333..2172 | 100 | <- | Minus |
3L | 16933293..16933360 | 265..332 | 100 | <- | Minus |
3L | 16935194..16935305 | 153..264 | 100 | <- | Minus |
3L | 16935365..16935516 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16931172..16933011 | 333..2172 | 100 | <- | Minus |
3L | 16933293..16933360 | 265..332 | 100 | <- | Minus |
3L | 16935194..16935305 | 153..264 | 100 | <- | Minus |
3L | 16935365..16935516 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 16924272..16926111 | 333..2172 | 100 | <- | Minus |
arm_3L | 16926393..16926460 | 265..332 | 100 | <- | Minus |
arm_3L | 16928294..16928405 | 153..264 | 100 | <- | Minus |
arm_3L | 16928465..16928616 | 1..152 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 16924272..16926111 | 333..2172 | 100 | <- | Minus |
3L | 16926393..16926460 | 265..332 | 100 | <- | Minus |
3L | 16928294..16928405 | 153..264 | 100 | <- | Minus |
3L | 16928465..16928616 | 1..152 | 100 | Minus |
Translation from 249 to 2072
> LD29172.hyp MRFLVLSTLLLASLALGQAQQHGGLAVEIQKQRLVKFPEDFEPNAATPSS EKADEAKRILEQIAKVNEAFGYVKKQPEQPKLPPILDSSQYLFPKPAHQP FHAHQHHFSGSNGQTLLEPSIRAVKLTRNVAGSYNVPPRLRQAIESTSKE EKKAQLYFRPKQVEVPKPSSEQEAQQLPAHFVVPVHLYKLNKEEYLKEHA SQEYKIKGYKIIGDVDSFYGKAKAGRKQGKTTPKYHLFFLPRELALNEDG TPKRGNSTTIGTTTTKAPVPVNFKEYRLDSREKPVHKPQKIQPTSSPELN SLNRKKVGSTAKPVRLSGKDAEQQIYQGSTSLNIKATSAPVLLSSTLPPS GGLLPNRNRLSPFRMPGMNIAEMQNQTSTAIKNAFQNIFKLPFRPPMAAT AGEGPVVVGNVPVKNHSIDSMDYKWEDENEGAGDGMADDVDTIENTAAEL DNSASSEKHLFAHKGHHLMHTVSQVATAQESTQKQALREGGIIIQRLKVR RGGIAIAGPGGVATAGSGGTAIVGPGGYALTHPRSLTIAGPGAKVISIPA DVDLKDALARTDLETRSFPREGKIVATGPTVYYAPPTGTTTMEADQGAGL ETGQFES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11905-PD | 607 | CG11905-PD | 1..607 | 1..607 | 3124 | 100 | Plus |
CG11905-PG | 607 | CG11905-PG | 1..607 | 1..607 | 3124 | 100 | Plus |
CG11905-PA | 607 | CG11905-PA | 1..607 | 1..607 | 3124 | 100 | Plus |
Translation from 249 to 2072
> LD29172.pep MRFLVLSTLLLASLALGQAQQHGGLAVEIQKQRLVKFPEDFEPNAATPSS EKADEAKRILEQIAKVNEAFGYVKKQPEQPKLPPILDSSQYLFPKPAHQP FHAHQHHFSGSNGQTLLEPSIRAVKLTRNVAGSYNVPPRLRQAIESTSKE EKKAQLYFRPKQVEVPKPSSEQEAQQLPAHFVVPVHLYKLNKEEYLKEHA SQEYKIKGYKIIGDVDSFYGKAKAGRKQGKTTPKYHLFFLPRELALNEDG TPKRGNSTTIGTTTTKAPVPVNFKEYRLDSREKPVHKPQKIQPTSSPELN SLNRKKVGSTAKPVRLSGKDAEQQIYQGSTSLNIKATSAPVLLSSTLPPS GGLLPNRNRLSPFRMPGMNIAEMQNQTSTAIKNAFQNIFKLPFRPPMAAT AGEGPVVVGNVPVKNHSIDSMDYKWEDENEGAGDGMADDVDTIENTAAEL DNSASSEKHLFAHKGHHLMHTVSQVATAQESTQKQALREGGIIIQRLKVR RGGIAIAGPGGVATAGSGGTAIVGPGGYALTHPRSLTIAGPGAKVISIPA DVDLKDALARTDLETRSFPREGKIVATGPTVYYAPPTGTTTMEADQGAGL ETGQFES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10495-PA | 592 | GF10495-PA | 1..579 | 1..595 | 2299 | 78.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15842-PA | 606 | GG15842-PA | 16..606 | 17..607 | 2853 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15130-PA | 599 | GH15130-PA | 1..597 | 1..607 | 1892 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11905-PD | 607 | CG11905-PD | 1..607 | 1..607 | 3124 | 100 | Plus |
CG11905-PG | 607 | CG11905-PG | 1..607 | 1..607 | 3124 | 100 | Plus |
CG11905-PA | 607 | CG11905-PA | 1..607 | 1..607 | 3124 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12067-PA | 634 | GI12067-PA | 1..618 | 1..590 | 1907 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20695-PA | 882 | GL20695-PA | 25..600 | 24..594 | 2163 | 74.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA28285-PA | 910 | GA28285-PA | 25..596 | 24..590 | 2157 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24359-PA | 606 | GM24359-PA | 1..606 | 1..607 | 2896 | 95.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12436-PA | 1315 | GD12436-PA | 1..654 | 1..603 | 2435 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13338-PA | 634 | GJ13338-PA | 23..628 | 27..596 | 2015 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17151-PA | 639 | GK17151-PA | 1..625 | 1..591 | 2030 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22180-PA | 617 | GE22180-PA | 1..617 | 1..607 | 2804 | 92.9 | Plus |