BDGP Sequence Production Resources |
Search the DGRC for LD29276
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 292 |
Well: | 76 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8461-RA |
Protein status: | LD29276.pep: gold |
Preliminary Size: | 1064 |
Sequenced Size: | 869 |
Gene | Date | Evidence |
---|---|---|
CG8461 | 2001-01-01 | Release 2 assignment |
CG8461 | 2001-10-10 | Blastp of sequenced clone |
CG8461 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8461 | 2008-04-29 | Release 5.5 accounting |
CG8461 | 2008-08-15 | Release 5.9 accounting |
CG8461 | 2008-12-18 | 5.12 accounting |
869 bp (869 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061371
> LD29276.complete ACACGTGAATTTCTTAAAAAGTAAATAAATAAAATTTTAAACGAAAACTA AAACAAAAATGTCCTCTCCCAGTGAATCCTCTTCAGCTTCTGAGCACGAG GCTAGCGATGACAACGAAACTCAGAATGCCATTCGCGAAGATCTCAAAGG AATGTCATTCGAGGAGATAATGAAACTAAAAGAGGAGCTGGGCGCCAAGG TGTACAAAGAGGCTGTGCTCGGTAGCAAGAGTTCTAGACCCCAAAAACCA AAGGCCAAAACCGACCTCAAGCGGCTAAACAAAAACCGACCTCGTGAAAT GACCACCAGACGACAGGTTCCATTTTTGGGCGCCGAGCACAGAGTGGAGC GGAAAAAAAATGTTGAACTCAGAGATCCAAGATTTGACGAAAAATCCGGA ACATATAGTGCAGAAACCTTCAAGAAGAACTACCAGTTTGTCTCCCAGAT TCGAGCAAAGGAAGTTGGTCAGCTGAAGAAAAAACTGGACGAAGTGGAGG ATGAGGCGGAGAAGCACCATATAAAGGACACCATGCAGCGACTTATCAAT AAAAATGTGGAGGACAAGAAGTGGCACACCAAACAGAAGCAACTGAAAAA GGAGCGCTCCGCCATTCAGAAGAAACACGATTTGGGACAACAACCTCATT ATCTGACAAAGAAGGAGCGTCGAGCTAAGGAACTAGTTGCCCAATTCGAG AAGCTGAAAAACACTGGAAAACTCAACAAGCACATGGAAAAGCGACGCAA GAAGAACGCCGCCAAGGACCGCAAACGCATTGGTATAGAATAAGACTTAC GCTTTAAGTATAAATGTATTTTAAACAATTAAAAGCACAGTGCAAATAAG CAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10337639..10338178 | 662..123 | 2700 | 100 | Minus |
chr3R | 27901430 | chr3R | 10337395..10337583 | 851..663 | 945 | 100 | Minus |
chr3R | 27901430 | chr3R | 10338238..10338361 | 124..1 | 620 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14512883..14513422 | 662..123 | 2700 | 100 | Minus |
3R | 32079331 | 3R | 14512636..14512827 | 854..663 | 960 | 100 | Minus |
3R | 32079331 | 3R | 14513482..14513605 | 124..1 | 620 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14253714..14254253 | 662..123 | 2700 | 100 | Minus |
3R | 31820162 | 3R | 14253467..14253658 | 854..663 | 960 | 100 | Minus |
3R | 31820162 | 3R | 14254313..14254436 | 124..1 | 620 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\INE-1 | 1467 | Dbuz\INE-1 ISBU1 1467bp | 534..583 | 847..797 | 108 | 70.6 | Minus |
3S18 | 6126 | 3S18 DM23420 6126bp Derived from U23420 (g733531) (Rel. 48, Last updated, Version 3). | 3194..3247 | 156..209 | 108 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10337395..10337583 | 663..851 | 100 | <- | Minus |
chr3R | 10337639..10338176 | 125..662 | 100 | <- | Minus |
chr3R | 10338238..10338318 | 44..124 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 1..735 | 59..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 1..735 | 59..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 1..735 | 59..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 1..735 | 59..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 1..735 | 59..793 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 1..851 | 1..851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 1..851 | 1..851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 33..883 | 1..851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 2..852 | 1..851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8461-RA | 33..883 | 1..851 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14512639..14512827 | 663..851 | 100 | <- | Minus |
3R | 14512883..14513420 | 125..662 | 100 | <- | Minus |
3R | 14513482..14513605 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14512639..14512827 | 663..851 | 100 | <- | Minus |
3R | 14512883..14513420 | 125..662 | 100 | <- | Minus |
3R | 14513482..14513605 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14512639..14512827 | 663..851 | 100 | <- | Minus |
3R | 14512883..14513420 | 125..662 | 100 | <- | Minus |
3R | 14513482..14513605 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10338361..10338549 | 663..851 | 100 | <- | Minus |
arm_3R | 10338605..10339142 | 125..662 | 100 | <- | Minus |
arm_3R | 10339204..10339327 | 1..124 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14253714..14254251 | 125..662 | 100 | <- | Minus |
3R | 14254313..14254436 | 1..124 | 100 | Minus | |
3R | 14253470..14253658 | 663..851 | 100 | <- | Minus |
Translation from 58 to 792
> LD29276.pep MSSPSESSSASEHEASDDNETQNAIREDLKGMSFEEIMKLKEELGAKVYK EAVLGSKSSRPQKPKAKTDLKRLNKNRPREMTTRRQVPFLGAEHRVERKK NVELRDPRFDEKSGTYSAETFKKNYQFVSQIRAKEVGQLKKKLDEVEDEA EKHHIKDTMQRLINKNVEDKKWHTKQKQLKKERSAIQKKHDLGQQPHYLT KKERRAKELVAQFEKLKNTGKLNKHMEKRRKKNAAKDRKRIGIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17479-PA | 249 | GF17479-PA | 3..247 | 2..243 | 1004 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21274-PA | 244 | GG21274-PA | 1..244 | 1..244 | 1163 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17448-PA | 244 | GH17448-PA | 1..244 | 1..244 | 891 | 73.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8461-PA | 244 | CG8461-PA | 1..244 | 1..244 | 1244 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22774-PA | 244 | GI22774-PA | 1..244 | 1..244 | 879 | 72.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23657-PA | 245 | GL23657-PA | 16..245 | 15..244 | 952 | 80.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21095-PA | 245 | GA21095-PA | 16..245 | 15..244 | 948 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25849-PA | 244 | GM25849-PA | 1..244 | 1..244 | 1239 | 97.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20416-PA | 244 | GD20416-PA | 1..244 | 1..244 | 1249 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ22776-PA | 244 | GJ22776-PA | 1..244 | 1..244 | 869 | 71.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12146-PA | 246 | GK12146-PA | 18..246 | 18..244 | 881 | 76 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26446-PA | 244 | GE26446-PA | 1..244 | 1..244 | 1171 | 96.3 | Plus |
Translation from 58 to 792
> LD29276.hyp MSSPSESSSASEHEASDDNETQNAIREDLKGMSFEEIMKLKEELGAKVYK EAVLGSKSSRPQKPKAKTDLKRLNKNRPREMTTRRQVPFLGAEHRVERKK NVELRDPRFDEKSGTYSAETFKKNYQFVSQIRAKEVGQLKKKLDEVEDEA EKHHIKDTMQRLINKNVEDKKWHTKQKQLKKERSAIQKKHDLGQQPHYLT KKERRAKELVAQFEKLKNTGKLNKHMEKRRKKNAAKDRKRIGIE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8461-PA | 244 | CG8461-PA | 1..244 | 1..244 | 1244 | 100 | Plus |