BDGP Sequence Production Resources |
Search the DGRC for LD29352
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 293 |
Well: | 52 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5877-RB |
Protein status: | LD29352.pep: gold |
Preliminary Size: | 2918 |
Sequenced Size: | 2693 |
Gene | Date | Evidence |
---|---|---|
CG5877 | 2001-01-01 | Release 2 assignment |
CG5877 | 2001-11-29 | Blastp of sequenced clone |
CG5877 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5877 | 2008-04-29 | Release 5.5 accounting |
CG5877 | 2008-08-15 | Release 5.9 accounting |
CG5877 | 2008-12-18 | 5.12 accounting |
2693 bp (2693 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069561
> LD29352.complete ATACAATCCCCATGACTTCTCAAGGGCTCACTCCAAATTTTCCCTAAAAC GTAGTCGCTACGTCAGAGAGAAACTGATCGCTGATGCACCCAGCGAAGAT GAGGTGTCCAGGCTGCAGGAGCAGCTCATACGCACCAAAGTGCTCGTCCA GCAGGAACCCGAGGTACTGGACCACTGGCTGCAGCTGCACCGTCTGCTCA ATCTCAACTTGGACAAGGCCAATCGGCTGGCGGTGGCGGAACAACAGATA CACAGCCTGGAAACGGCCATGGAGCACCATCCGTCCAATCAACAGATTCT GCGGCTCTACACGCACGTGGCCAATGCCACCTATCAGGCCAACGAGGTTG CTAGGCGATTCGAGAAAATGCTGAAGAGAAACCCATTCCAGTACACACTG TGGAGCAACCTAATAATGATCACCCAAGGCGACATGGCTTGTTGCAACGT GTCCGCTGTGCTCCGGATTTACGAGTACAGCATGCGCCGCATGCATGTGG GACACAACGATGAAATAACCCGAAGATTCATCATTAAGGAGACTGATGTG ATAATGCTAAAACTTTTTCACAATTGCTTACTATTCCTACGCCAATCGGG CCATACTAACTGGATGTTTGCTCTGATTCGTTTGTCTATGGAGTTGAATT TCCCCTACCTGACGTTCGAATGCCTACAAGCACATGCAGGAAGAGAAAAA GCATTGATTGGATTCGAGGAAGTGGTGCTGCGTTCGGGAATGCCGATGCC CGAGATCTGGACGCGTGTGGAGCAGCTCAGACAGGCATACTGCTTCCTGC CGTTGAAAGACAAGCTGGCTTCGTCGACTAATGTCTTCAAAAACAAGATG AACGCCGAACGATACTTTTGCAGCGACAAACTTGTCCCATATGTACACGC ACTCAAGTCGCAGAATAATCGTCTGCACCTGGTGCTCGTGGTTGTTCAAC TAATGAAATTGCCCCTGATTCGCAGCGCTAGTTTGGCGGACAAATTGAAT CCTTGCATCGAGGACTTCGGCGAGTCTGAGGCCATTGAAATGCTTTTCGC TGCCATAGTAGATAGGCACTCCTATGCAGTGGCTTCGTTGCAATATCAAT TTGATGCAGCCATGATCGACTTAGCCAGAGAGATGTCCGTGACGCCCAGC TACATGCCGCATCTTGTTGGCCATAAACTGTATGCGGATACCGTGAGTAA TATGCTACTCAAATGCGTCGAAGTCTTTATCGGCGAGGAGTCCAAGCGAC GATTGTTGCTTATTCTGTATTTGCGATTCCAAAAACTATTAATAGTGCTG CACAAGTCCATGGGCAAGCTAACGAAAAAATTCTTTAAGGATAAACGAAC ACGGATGCGCAAACTGATCAATTTGACGGAGAACCGAAATGTTATTAGTT TCTACACGGAACAGGCCTTGTGCGAAATTGAGGCTAAGCATTACCGACTG GGCTTTTCCATAATTTCGAGGATCATCACAAAAAAATCGGAAGAATCCAG CTGCATTAGTTGCGTGGACACAATGCATCTCTATTTAGTTTGTGCAGAAT TGCATATACATAGGGGCCGCATATCTAAGGCCATCGGCATACTCGTTTCA CTGTGTTTGGAAAAACATGCCGGAGTAAAGCAGACAACTGTCTACTCCAA GGAACAGGTTTTGAAAGGCCTGAGAAATGCAGAGAAAATGGTGCGAGCGG AACTGAAATCCCTCGATACCCAGCCAGCTGAGATGTCTTTGGAGGAGTAC TTCCAGCCCAACAAATTGCTCATCCTCTTGCGCGCTATCTGTTTGATCGA AGTGCTGAATAATCGTCGTCATAAGGAGGCTAGAATGTGGCTCAATGACC TGCAGAATAACGAATTTGGTCCCGAGGCCGTCAAGGACAGCGAAAGAAAG CGTTTCCTTAGGGAGCAGATCATGGAAATACAGATGCTACATCTGCGTTT GTCCTTTTTAGTATTTGGCGAAGTTGAATTCTATACTGGATTCAAAAAGA TCAAGCTACATGAACTGCTCGAGAATGGACTCGAAGAGTTTCCACGAAAT ATGGTGTTTCTACAGCTGTGGGCCAGCTTAAAATCGATTATGTGGCACAA GCAGCGTAGCCGGCTCATACGCACCAAAGCCGGCATCGCTTCACTGGCGC ACTTGGTCGTTGCGATTCACAATCGCTTTGGAATCGTAGATACCAACGAT AAGTTTTCAAAGGAAGCCACAAGGAAGATGGTGTGCAATCGTTTGGTCAG CATTGTCGAGACTTTTCTCCCGACCAATTTAGATCGTTTGGATGTGGAGG AAGAGCATTATCGCATACTGCGCAGGAACTCCATCTATTGGCGCTTGTAC ATGATTGCCCTATCCAAAACGAATGCCTCGTTTAGGCGCAGCAAAGAAGT CCTTATAATGGCCATGGACGAGTGTCCCTGGGACAAGTCACTACTGATGG AAGGCGCCAAGGTTTTGCCAGTGAAACTAGCATCGCTACAGGACCTGATG ACCGAAAAAGAGATTCGCATTTTCGCTATGCCCGAGGAAGTGGACGTCTT GAGGGGCTTTTAAGTCGCTTTGGTTTTATTCGTTTGTTTTGAGGTTATTT GCCATTCGGGCGACTCGATAAGTTCGCATCATAAATATATTTATTTCTTC AAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 15184287..15186594 | 347..2654 | 99 | Plus | |
chrX | 15183497..15183842 | 1..346 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 393..2955 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 393..2955 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 393..2955 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 393..2955 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 393..2955 | 1..2563 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 516..3169 | 1..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 516..3169 | 1..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 518..3171 | 1..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 516..3169 | 1..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5877-RA | 518..3171 | 1..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15293548..15293893 | 1..346 | 100 | -> | Plus |
X | 15294337..15296644 | 347..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15293548..15293893 | 1..346 | 100 | -> | Plus |
X | 15294337..15296644 | 347..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15293548..15293893 | 1..346 | 100 | -> | Plus |
X | 15294337..15296644 | 347..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 15187581..15187926 | 1..346 | 100 | -> | Plus |
arm_X | 15188370..15190677 | 347..2654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 15301646..15301991 | 1..346 | 100 | -> | Plus |
X | 15302435..15304742 | 347..2654 | 100 | Plus |
Translation from 0 to 2562
> LD29352.hyp YNPHDFSRAHSKFSLKRSRYVREKLIADAPSEDEVSRLQEQLIRTKVLVQ QEPEVLDHWLQLHRLLNLNLDKANRLAVAEQQIHSLETAMEHHPSNQQIL RLYTHVANATYQANEVARRFEKMLKRNPFQYTLWSNLIMITQGDMACCNV SAVLRIYEYSMRRMHVGHNDEITRRFIIKETDVIMLKLFHNCLLFLRQSG HTNWMFALIRLSMELNFPYLTFECLQAHAGREKALIGFEEVVLRSGMPMP EIWTRVEQLRQAYCFLPLKDKLASSTNVFKNKMNAERYFCSDKLVPYVHA LKSQNNRLHLVLVVVQLMKLPLIRSASLADKLNPCIEDFGESEAIEMLFA AIVDRHSYAVASLQYQFDAAMIDLAREMSVTPSYMPHLVGHKLYADTVSN MLLKCVEVFIGEESKRRLLLILYLRFQKLLIVLHKSMGKLTKKFFKDKRT RMRKLINLTENRNVISFYTEQALCEIEAKHYRLGFSIISRIITKKSEESS CISCVDTMHLYLVCAELHIHRGRISKAIGILVSLCLEKHAGVKQTTVYSK EQVLKGLRNAEKMVRAELKSLDTQPAEMSLEEYFQPNKLLILLRAICLIE VLNNRRHKEARMWLNDLQNNEFGPEAVKDSERKRFLREQIMEIQMLHLRL SFLVFGEVEFYTGFKKIKLHELLENGLEEFPRNMVFLQLWASLKSIMWHK QRSRLIRTKAGIASLAHLVVAIHNRFGIVDTNDKFSKEATRKMVCNRLVS IVETFLPTNLDRLDVEEEHYRILRRNSIYWRLYMIALSKTNASFRRSKEV LIMAMDECPWDKSLLMEGAKVLPVKLASLQDLMTEKEIRIFAMPEEVDVL RGF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5877-PD | 984 | CG5877-PD | 132..984 | 1..853 | 4368 | 100 | Plus |
CG5877-PA | 984 | CG5877-PA | 132..984 | 1..853 | 4368 | 100 | Plus |
CG5877-PB | 731 | CG5877-PB | 1..731 | 123..853 | 3744 | 100 | Plus |
Translation from 367 to 2562
> LD29352.pep MLKRNPFQYTLWSNLIMITQGDMACCNVSAVLRIYEYSMRRMHVGHNDEI TRRFIIKETDVIMLKLFHNCLLFLRQSGHTNWMFALIRLSMELNFPYLTF ECLQAHAGREKALIGFEEVVLRSGMPMPEIWTRVEQLRQAYCFLPLKDKL ASSTNVFKNKMNAERYFCSDKLVPYVHALKSQNNRLHLVLVVVQLMKLPL IRSASLADKLNPCIEDFGESEAIEMLFAAIVDRHSYAVASLQYQFDAAMI DLAREMSVTPSYMPHLVGHKLYADTVSNMLLKCVEVFIGEESKRRLLLIL YLRFQKLLIVLHKSMGKLTKKFFKDKRTRMRKLINLTENRNVISFYTEQA LCEIEAKHYRLGFSIISRIITKKSEESSCISCVDTMHLYLVCAELHIHRG RISKAIGILVSLCLEKHAGVKQTTVYSKEQVLKGLRNAEKMVRAELKSLD TQPAEMSLEEYFQPNKLLILLRAICLIEVLNNRRHKEARMWLNDLQNNEF GPEAVKDSERKRFLREQIMEIQMLHLRLSFLVFGEVEFYTGFKKIKLHEL LENGLEEFPRNMVFLQLWASLKSIMWHKQRSRLIRTKAGIASLAHLVVAI HNRFGIVDTNDKFSKEATRKMVCNRLVSIVETFLPTNLDRLDVEEEHYRI LRRNSIYWRLYMIALSKTNASFRRSKEVLIMAMDECPWDKSLLMEGAKVL PVKLASLQDLMTEKEIRIFAMPEEVDVLRGF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21230-PA | 1010 | GF21230-PA | 263..1008 | 1..729 | 1446 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17871-PA | 993 | GG17871-PA | 257..991 | 1..729 | 2280 | 62 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17615-PA | 992 | GH17615-PA | 274..722 | 1..465 | 776 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5877-PD | 984 | CG5877-PD | 254..984 | 1..731 | 3744 | 100 | Plus |
CG5877-PB | 731 | CG5877-PB | 1..731 | 1..731 | 3744 | 100 | Plus |
CG5877-PA | 984 | CG5877-PA | 254..984 | 1..731 | 3744 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21771-PA | 1030 | GI21771-PA | 276..1024 | 6..730 | 1197 | 35.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15996-PA | 828 | GL15996-PA | 89..826 | 1..729 | 1698 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA24354-PA | 999 | GA24354-PA | 260..997 | 1..729 | 1690 | 46.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19624-PA | 641 | GM19624-PA | 1..641 | 91..731 | 2862 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17202-PA | 983 | GD17202-PA | 253..983 | 1..731 | 3359 | 87 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16943-PA | 986 | GJ16943-PA | 257..984 | 1..729 | 1301 | 41.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16198-PA | 871 | GK16198-PA | 251..539 | 1..284 | 707 | 49 | Plus |
Dwil\GK16198-PA | 871 | GK16198-PA | 532..863 | 405..729 | 535 | 40.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17173-PA | 991 | GE17173-PA | 256..989 | 1..729 | 2404 | 64.6 | Plus |