BDGP Sequence Production Resources |
Search the DGRC for LD29420
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 294 |
Well: | 20 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11723-RA |
Protein status: | LD29420.pep: gold |
Preliminary Size: | 1962 |
Sequenced Size: | 1738 |
Gene | Date | Evidence |
---|---|---|
CG11723 | 2001-01-01 | Release 2 assignment |
CG11723 | 2001-12-16 | Blastp of sequenced clone |
CG11723 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11723 | 2008-04-29 | Release 5.5 accounting |
CG11723 | 2008-08-15 | Release 5.9 accounting |
CG11723 | 2008-12-18 | 5.12 accounting |
1738 bp (1738 high quality bases) assembled on 2001-12-16
GenBank Submission: AY070885
> LD29420.complete CGCAATTAATCATTTATTTGTAGTGGCAAGCGAAACTGCGAGATTTAGCA AGAGCAAGATTTTGTATATTCCACCAAAACGCAGCAAAGCAAGCCCGAAT TTGGGATATTAAAAGTGTTACCGTCGGGTCGAAACCGCTCACACATTCGT CGAGTTTGCTGTGAGCGCGGTCATTGCTGTGAAAATTGCGTTGAAAATTC GGGATCCGCAAGTTTCGGAGCATTGCATTTGTGGACAAACCGCAATTTCT GGTCCACTGCGCCATGAAATCAGATAACTACCGTCTCATACAGGAGGTGT CCAAGCGGCGGTGCCTGTGGGACACAAACATGTCCATTTCGTACCGCAAC CAGGACGCAGCTCTCCAGTGGGCGAGTGTCGCGCAGATAATGCAGCAGGA TGTCTCGATCTGCAAGAAACGTTTCAAGGGAATGCGGGACAGCTACCGGG CAGAGGTGCGCAAGATACAGCAGAAACGAATCGAGATGTCCCACTGGCCA TACTTTCGCTCACTGGAGTTCATGCGCCAAATCTTCGATCCGGAGGGCCT GGTGCCCTTTCCACCAGAGCCCTTCGTGATGAACACCGAGCAGCCGGAAG TCTTCGAGCCCACCCGACTGGTTGACTTCGCTATCGATTTGGATTTGGAC AATGATGACTCTGTTGACTTTGAAATCATCGAGGACATATTTAAGCGGGA GCCGTCAGTGCCCCAGGACTCTGGCTCGGATAAAGGCTCGCTGATCAAGC CTTTGGATTCTTCATCCTCGGGCGCCCATCGTTCCGATCAGGATCTATCG CCCACATTGCCCATACACTTGCCGCGCCACCAACAATTCCTGCCACGTCC ACCCCCGCCTTCGAAGAGAGGACGTCGGAGGAAAACTTCGCCGTCTAACG ATGTCCCCTTATTGAATGGATACGCCAGCCAGGCGTCAAAGTCTACCACT GAACCCGATCTAAAGAACGATTCGGACTTGAGTTTCTTGATGAGCATGAT GCCGCACGTAAAGTCTCTGTCAGCCATTAGCAATCTTAAGTTTCGAATGG AGATGGCGCGCGTTCTGGTGGAACTCAGGGAGGAGGATCAGCACATGCTC GCGGCGGCGGGACCCGAAGACGTTCTAGAGCGCAGCATGCCCAAACTAAC ACCAGCCCCGAATTCCAGTTTTGCCACTCAGCTGGAGAAATCCCAGTACC ATCTATCCAATTCCAGCTACCAAATCAGTAGCCGAAAAACACCAACTTCG TTTGACTATGTCGACAGCTCCATGGTTGAGTGCGATGTCAAGATAGAGAA TGAGCCTCTGCTATGAAGACTTCATACCAAATTTTTACGATTTTACATTC ACCAATAATTCTCTAAGGAGTATTCCTTTCATATTGTTACAAGTCTTAGA TGAAACCCTACTCATACATGAGTAGTTGTTTGGCAAAATGCCTATCATAA GACCATTATCCACACGCTGAATTGCTTGTAAAATATTGATTTGTATTGTC CAATAATTTAACCATTTTGACTCCGGGTATGCCATTCGCGGGCTGTTTTA AAGCAATTTACACGAAATGGAATATACAAACAAAATAACAGCTGATGCTG ATTAAATTTTAAGGTTTAGCTTATCATTGGGATGTCATCTGGAAGGAATT TTAATGGATTTGAATTGATTTAAGATTCTGTTTTCGAATAGACACGTAAT AAATATGTGCATACGATTTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11723-RA | 1971 | CG11723-RA | 59..1783 | 1..1725 | 8625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2145240..2146556 | 403..1719 | 99 | <- | Minus |
chr2L | 2146629..2147030 | 1..402 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1053 | 264..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1053 | 264..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1053 | 264..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1053 | 264..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1053 | 264..1316 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1719 | 1..1719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1719 | 1..1719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1707 | 13..1719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1719 | 1..1719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11723-RA | 1..1707 | 13..1719 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2145497..2146813 | 403..1719 | 100 | <- | Minus |
2L | 2146886..2147287 | 1..402 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2145497..2146813 | 403..1719 | 100 | <- | Minus |
2L | 2146886..2147287 | 1..402 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2145497..2146813 | 403..1719 | 100 | <- | Minus |
2L | 2146886..2147287 | 1..402 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2146886..2147287 | 1..402 | 100 | Minus | |
arm_2L | 2145497..2146813 | 403..1719 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2146886..2147287 | 1..402 | 100 | Minus | |
2L | 2145497..2146813 | 403..1719 | 100 | <- | Minus |
Translation from 263 to 1315
> LD29420.pep MKSDNYRLIQEVSKRRCLWDTNMSISYRNQDAALQWASVAQIMQQDVSIC KKRFKGMRDSYRAEVRKIQQKRIEMSHWPYFRSLEFMRQIFDPEGLVPFP PEPFVMNTEQPEVFEPTRLVDFAIDLDLDNDDSVDFEIIEDIFKREPSVP QDSGSDKGSLIKPLDSSSSGAHRSDQDLSPTLPIHLPRHQQFLPRPPPPS KRGRRRKTSPSNDVPLLNGYASQASKSTTEPDLKNDSDLSFLMSMMPHVK SLSAISNLKFRMEMARVLVELREEDQHMLAAAGPEDVLERSMPKLTPAPN SSFATQLEKSQYHLSNSSYQISSRKTPTSFDYVDSSMVECDVKIENEPLL *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15306-PA | 378 | GF15306-PA | 1..378 | 1..350 | 867 | 54 | Plus |
Dana\GF19458-PA | 357 | GF19458-PA | 23..112 | 1..91 | 180 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24555-PA | 344 | GG24555-PA | 1..344 | 1..350 | 1571 | 84.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11477-PA | 339 | GH11477-PA | 1..339 | 1..350 | 697 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11723-PB | 350 | CG11723-PB | 1..350 | 1..350 | 1814 | 100 | Plus |
CG11723-PA | 350 | CG11723-PA | 1..350 | 1..350 | 1814 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16972-PA | 340 | GI16972-PA | 1..339 | 1..349 | 666 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19421-PA | 350 | GL19421-PA | 1..350 | 1..350 | 711 | 46.8 | Plus |
Dper\GL22159-PA | 282 | GL22159-PA | 2..282 | 4..350 | 435 | 36.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11162-PA | 349 | GA11162-PA | 1..349 | 1..350 | 698 | 46.1 | Plus |
Dpse\GA28255-PA | 282 | GA28255-PA | 2..282 | 4..350 | 381 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23685-PA | 350 | GM23685-PA | 1..350 | 1..350 | 1759 | 94.6 | Plus |
Dsec\GM22560-PA | 294 | GM22560-PA | 18..243 | 8..278 | 172 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22872-PA | 350 | GD22872-PA | 1..350 | 1..350 | 1761 | 94.6 | Plus |
Dsim\GD17225-PA | 254 | GD17225-PA | 18..243 | 8..278 | 168 | 24.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17218-PA | 343 | GJ17218-PA | 1..343 | 1..350 | 746 | 48.2 | Plus |
Dvir\GJ16492-PA | 197 | GJ16492-PA | 1..130 | 1..131 | 196 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14997-PA | 365 | GK14997-PA | 1..365 | 1..350 | 615 | 42.5 | Plus |
Translation from 263 to 1315
> LD29420.hyp MKSDNYRLIQEVSKRRCLWDTNMSISYRNQDAALQWASVAQIMQQDVSIC KKRFKGMRDSYRAEVRKIQQKRIEMSHWPYFRSLEFMRQIFDPEGLVPFP PEPFVMNTEQPEVFEPTRLVDFAIDLDLDNDDSVDFEIIEDIFKREPSVP QDSGSDKGSLIKPLDSSSSGAHRSDQDLSPTLPIHLPRHQQFLPRPPPPS KRGRRRKTSPSNDVPLLNGYASQASKSTTEPDLKNDSDLSFLMSMMPHVK SLSAISNLKFRMEMARVLVELREEDQHMLAAAGPEDVLERSMPKLTPAPN SSFATQLEKSQYHLSNSSYQISSRKTPTSFDYVDSSMVECDVKIENEPLL *