Clone LD29479 Report

Search the DGRC for LD29479

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:294
Well:79
Vector:pOT2
Associated Gene/TranscriptCG2316-RA
Protein status:LD29479.pep: gold
Preliminary Size:2930
Sequenced Size:2594

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2316 2001-01-01 Release 2 assignment
CG2316 2002-06-12 Blastp of sequenced clone
CG2316 2003-01-01 Sim4 clustering to Release 3
CG2316 2008-04-29 Release 5.5 accounting
CG2316 2008-08-15 Release 5.9 accounting
CG2316 2008-12-18 5.12 accounting

Clone Sequence Records

LD29479.complete Sequence

2594 bp (2594 high quality bases) assembled on 2002-06-12

GenBank Submission: AY122172

> LD29479.complete
ATATGGACGATTAATGCCAAAATTCCGATTTTTCATAAACTGTTTTGTGC
AACGATAAATCCAAACGTCAAAGAACTATTATACTGTCAACAATGAGTGT
TTTATCAAAATATGTTGACCGGATTGCAGAAAAGTGTGAACATAATGGGT
TTACAAAACACGCTTTTAGCTATGCTCTAGTAACTAGTGCTATCCTAGCA
CTTACCATTAAAGTTACTATCCCTTACGTAAAAAACGTAAATACTACGTC
TAGTGTAAGGACCCAAAAAGGAAAAACCAATGGCCAACTTTCACCATCGA
CAAGAGATAGCTCAGAAGAGGATTTCAAGCTTGCAGAGGCCGAAAAGTTA
TTGGTTGCACAGCAGCTTAAAAAAAAAGCTACAAATAATTTAGTTGAGCC
TGGTCTAAATAAGGAGTTTTTAAAACATTTGCAAATGTTGGCCAAAATAA
TGATTCCTCAGGCCTTCTGCTATGAAACAGGATTACTAAGCGTTCATACT
TTTTGCTTGATTTCTCGAACATTTCTTAGTATTTATGTTGCCGCATTGGA
GGGAGCTCTTGTTAAATTTATAGTTCGAAAGGATATTAAGCAATTTGCCC
TTGTATTGCTTAAATGGTTTGGAATTGCTATCCCTGCTACTTTCGTTAAT
TCTATGATACGGTTTCTCGAAAGTAAACTGTCTCTGGCGTTTCGAACTCG
GCTTGTGCGTCACTCATATCGGCTCTATTTTAAAAACCAAAATTACTACA
GAGTATCAAATTTGGACGGACGCATTGAAAACGCGGATCATAGACTTACG
GAAGATATTTCTGTGTTCGCAAATTCTGTAGCTCATTTGTATAGTAGCCT
GACTAAACCATGCTTCGATCTGATGCTTATTGGCTTGGCACTAATGAGAT
CGTCTAAAAAAATGAAAGCTAACATTATAACTGGACCAGCATTATCAATC
GGGGTTATTGCCCTTACAGCCCATATATTAAGAATTGTTTCACCGAAGTT
CGGACAGCTGGTATCGGAAGAAGCAAATAGATATGGGTATTTAAGACATA
TACACTCCCGCATAATAACAAATGCGGAAGAAATTGCTTTTTACGGAGGT
CATAAGGTGGAAATGCAGCAGCTAAGGCAGGCATACAACCGCCTGGTAAA
TCAAATGACTACAATTTTTAACCAAAAGCTTTGGTTTATAATGCTTGAAC
AATTTTTTATGAAATACGTTTGGTCGGGTACTGGAATGATTATGGTATCA
CTTCCAATTTTGACCGGCAGTGACGTAGGACTTGGAACCGTTCCCAACAC
GGCCATATCGGAATCCCGAGTTAGCGAACGCACTCAATATCTAACTACTG
CTAGAAATTTACTAATTTCCGCAGCAGACGCGATTGAGCGATTAATGTCT
TCTTACAAGGAAATCGTGTCGCTTGCTGGCTACACATTTAGAGTGGCTGG
TATGATGGATGTCTTTGAGGAAACTGCTTTGGGAGTTTATTGCAAGACAA
GTGTAATGGAATCCAATCAGTCGAACGGTATTATTGAGTTTCGTAATGGA
AAACCAATAGCAAAGGGTCGCATAATCTATTCAGATGATCCGAAAAATAT
GTCAATTAGCCTTCGTGCAGTGCCAGTGGTCACACCTAACTGTGATATAG
TTGTACCAAAACTTACATTGTGCATAGAGCCTGGTGTGCACTTGTTAATA
ACTGGGCCAAATGGATGTGGAAAATCGAGCTTGTTTAGAATACTAAGTGG
ACTTTGGCCTATATACGCAGGGGAGTTGCACATACCAAGGCCTGTGAAAG
ACGTTCCATGTATGTTTTACATTCCCCAACGTCCATATATGTCAATCGGC
AGCCTGTGTGATCAAATTATATACCCTGACACGAGGGAAGATATGAAACG
CAAGCATATAACTGAAAACGAGCTAAGATCCATTTTGAAAATGGTCAGCC
TTGAGCACATCGCTCAACGGGATAGCTTTGACGTTGTTCGTGATTGGAAG
GATATATTATCCGGAGGTGAAAAACAACGTATGGCGATAGCCCGTTTGTT
TTATCATAGACCGCGCTATGCCCTTCTTGATGAATGCACCAGTGCAGTAT
CTATAGATGTTGAAAGCTCGATTTATGAAATTGCTAAAGGAATGGGAATT
ACTTTGTTAACCATAACACACAGGCCTACTTTGTGGAAATATCACACACA
TATTTTGGAGTTTGACGGTCTTGGAAACTGGCAGTTTAGAAAAATGAATT
CAGATGAAGAACAAAAAGGACAATTTCTATCGTAGTACAAAGTTGTTTCG
GGGAACCGAAGCTTTTATACCCGTGCAGTTTTGACATAAACTTACTTATC
AAGATTGTGTACACAACAGTAATAGAATACAGTCTTCCGATTTATAAGCA
AATTCCACAAATCGTCAGGTTTTTAAAATCTTATATAAATATTATAATTA
TATAATTATTATATATAATTTAAACTCCTTTTATTTTATTTTTACAATTT
TTTTTAAACATAACTAAAAATATGATTTTATGCATAGGTGTGAGCAATAT
TAAAAAACCTTAAAATTTTAATTTGAAAAAAAAAAAAAAAAAAA

LD29479.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:47:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG2316-RD 2855 CG2316-RD 132..2708 1..2577 12885 100 Plus
CG2316.b 2712 CG2316.b 151..2705 23..2577 12775 100 Plus
CG2316-RG 2710 CG2316-RG 149..2703 23..2577 12775 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 206602..207467 1970..1105 4330 100 Minus
chr4 1351717 chr4 209197..209867 694..24 3355 100 Minus
chr4 1351717 chr4 204851..205241 2575..2185 1955 100 Minus
chr4 1351717 chr4 208613..208789 1109..933 885 100 Minus
chr4 1351717 chr4 208848..208991 934..791 720 100 Minus
chr4 1351717 chr4 205295..205424 2186..2057 650 100 Minus
chr4 1351717 chr4 209044..209147 793..690 505 99 Minus
chr4 1351717 chr4 206452..206542 2059..1969 455 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:22:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:27:57
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 185977..186842 1970..1105 4330 100 Minus
4 1348131 4 188578..189248 694..24 3355 100 Minus
4 1348131 4 184223..184615 2577..2185 1965 100 Minus
4 1348131 4 187994..188170 1109..933 885 100 Minus
4 1348131 4 188229..188372 934..791 720 100 Minus
4 1348131 4 184669..184798 2186..2057 650 100 Minus
4 1348131 4 188425..188528 793..690 505 99 Minus
4 1348131 4 185827..185917 2059..1969 455 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
4 1331231 4 185977..186842 1970..1105 4330 100 Minus
4 1331231 4 188578..189248 694..24 3355 100 Minus
4 1331231 4 184223..184615 2577..2185 1965 100 Minus
4 1331231 4 187994..188170 1109..933 885 100 Minus
4 1331231 4 188229..188372 934..791 720 100 Minus
4 1331231 4 184669..184798 2186..2057 650 100 Minus
4 1331231 4 188425..188528 793..690 505 99 Minus
4 1331231 4 185827..185917 2059..1969 455 100 Minus
Blast to na_te.dros performed on 2019-03-15 18:27:58 has no hits.

LD29479.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:29:20 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 204851..205240 2186..2575 100 <- Minus
chr4 205296..205421 2060..2185 100 <- Minus
chr4 206452..206541 1970..2059 100 <- Minus
chr4 206603..207465 1107..1969 100 <- Minus
chr4 208616..208788 934..1106 100 <- Minus
chr4 208849..208988 794..933 100 <- Minus
chr4 209044..209142 695..793 100 <- Minus
chr4 209197..209867 24..694 100 <- Minus
chr4 214292..214314 1..23 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:09:56 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RA 1..2193 93..2285 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:22:26 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RA 1..2193 93..2285 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 03:04:57 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RD 1..2193 93..2285 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:13:12 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RA 1..2193 93..2285 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:04:13 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RD 1..2193 93..2285 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:49:08 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RD 128..2702 1..2575 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:22:26 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RD 128..2702 1..2575 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:04:57 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RD 135..2709 1..2575 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:13:12 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RD 128..2702 1..2575 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:04:13 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
CG2316-RD 135..2709 1..2575 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:29:20 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
4 184225..184614 2186..2575 100 <- Minus
4 184670..184795 2060..2185 100 <- Minus
4 185827..185916 1970..2059 100 <- Minus
4 185978..186840 1107..1969 100 <- Minus
4 187997..188169 934..1106 100 <- Minus
4 188230..188369 794..933 100 <- Minus
4 188425..188523 695..793 100 <- Minus
4 188578..189248 24..694 100 <- Minus
4 193673..193695 1..23 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:29:20 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
4 184225..184614 2186..2575 100 <- Minus
4 184670..184795 2060..2185 100 <- Minus
4 185827..185916 1970..2059 100 <- Minus
4 185978..186840 1107..1969 100 <- Minus
4 187997..188169 934..1106 100 <- Minus
4 188230..188369 794..933 100 <- Minus
4 188425..188523 695..793 100 <- Minus
4 188578..189248 24..694 100 <- Minus
4 193673..193695 1..23 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:29:20 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
4 184225..184614 2186..2575 100 <- Minus
4 184670..184795 2060..2185 100 <- Minus
4 185827..185916 1970..2059 100 <- Minus
4 185978..186840 1107..1969 100 <- Minus
4 187997..188169 934..1106 100 <- Minus
4 188230..188369 794..933 100 <- Minus
4 188425..188523 695..793 100 <- Minus
4 188578..189248 24..694 100 <- Minus
4 193673..193695 1..23 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:04:57 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 204851..205240 2186..2575 100 <- Minus
arm_4 205296..205421 2060..2185 100 <- Minus
arm_4 206453..206542 1970..2059 100 <- Minus
arm_4 206604..207466 1107..1969 100 <- Minus
arm_4 208623..208795 934..1106 100 <- Minus
arm_4 208856..208995 794..933 100 <- Minus
arm_4 209051..209149 695..793 100 <- Minus
arm_4 209204..209874 24..694 100 <- Minus
arm_4 214299..214321 1..23 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:45:59 Download gff for LD29479.complete
Subject Subject Range Query Range Percent Splice Strand
4 188425..188523 695..793 100 <- Minus
4 184225..184614 2186..2575 100 <- Minus
4 184670..184795 2060..2185 100 <- Minus
4 185827..185916 1970..2059 100 <- Minus
4 185978..186840 1107..1969 100 <- Minus
4 187997..188169 934..1106 100 <- Minus
4 188230..188369 794..933 100 <- Minus
4 188578..189248 24..694 100 <- Minus
4 193673..193695 1..23 100   Minus

LD29479.pep Sequence

Translation from 92 to 2284

> LD29479.pep
MSVLSKYVDRIAEKCEHNGFTKHAFSYALVTSAILALTIKVTIPYVKNVN
TTSSVRTQKGKTNGQLSPSTRDSSEEDFKLAEAEKLLVAQQLKKKATNNL
VEPGLNKEFLKHLQMLAKIMIPQAFCYETGLLSVHTFCLISRTFLSIYVA
ALEGALVKFIVRKDIKQFALVLLKWFGIAIPATFVNSMIRFLESKLSLAF
RTRLVRHSYRLYFKNQNYYRVSNLDGRIENADHRLTEDISVFANSVAHLY
SSLTKPCFDLMLIGLALMRSSKKMKANIITGPALSIGVIALTAHILRIVS
PKFGQLVSEEANRYGYLRHIHSRIITNAEEIAFYGGHKVEMQQLRQAYNR
LVNQMTTIFNQKLWFIMLEQFFMKYVWSGTGMIMVSLPILTGSDVGLGTV
PNTAISESRVSERTQYLTTARNLLISAADAIERLMSSYKEIVSLAGYTFR
VAGMMDVFEETALGVYCKTSVMESNQSNGIIEFRNGKPIAKGRIIYSDDP
KNMSISLRAVPVVTPNCDIVVPKLTLCIEPGVHLLITGPNGCGKSSLFRI
LSGLWPIYAGELHIPRPVKDVPCMFYIPQRPYMSIGSLCDQIIYPDTRED
MKRKHITENELRSILKMVSLEHIAQRDSFDVVRDWKDILSGGEKQRMAIA
RLFYHRPRYALLDECTSAVSIDVESSIYEIAKGMGITLLTITHRPTLWKY
HTHILEFDGLGNWQFRKMNSDEEQKGQFLS*

LD29479.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 08:50:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23402-PA 728 GF23402-PA 1..727 1..729 3255 82.4 Plus
Dana\GF20219-PA 665 GF20219-PA 63..664 105..726 1059 37.9 Plus
Dana\GF13488-PA 1309 GF13488-PA 1083..1264 520..694 174 29.9 Plus
Dana\GF11993-PA 1307 GF11993-PA 1081..1264 520..696 167 29.3 Plus
Dana\GF10906-PA 1317 GF10906-PA 428..622 519..708 167 27 Plus
Dana\GF13488-PA 1309 GF13488-PA 446..625 520..694 159 29.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 08:50:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16459-PA 730 GG16459-PA 1..729 1..729 3778 96.2 Plus
Dere\GG19257-PA 665 GG19257-PA 63..664 105..726 1041 36.6 Plus
Dere\GG20437-PA 1308 GG20437-PA 1085..1280 520..708 165 28.4 Plus
Dere\GG22536-PA 1302 GG22536-PA 1076..1259 520..696 161 28.2 Plus
Dere\GG20437-PA 1308 GG20437-PA 448..627 520..694 160 29.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 08:50:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH24000-PA 738 GH24000-PA 1..737 1..729 3143 80.3 Plus
Dgri\GH24473-PA 667 GH24473-PA 30..666 63..726 1077 36.9 Plus
Dgri\GH21790-PA 1305 GH21790-PA 956..1260 412..694 168 25.1 Plus
Dgri\GH21790-PA 1305 GH21790-PA 443..622 520..694 162 28.9 Plus
Dgri\GH21602-PA 1327 GH21602-PA 1101..1282 520..694 158 26.9 Plus
Dgri\GH24416-PA 673 GH24416-PA 413..635 500..701 157 29.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:40:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG2316-PH 730 CG2316-PH 1..730 1..730 3738 100 Plus
CG2316-PC 730 CG2316-PC 1..730 1..730 3738 100 Plus
CG2316-PD 730 CG2316-PD 1..730 1..730 3738 100 Plus
CG2316-PA 730 CG2316-PA 1..730 1..730 3738 100 Plus
CG2316-PG 730 CG2316-PG 1..730 1..730 3738 100 Plus
CG2316-PB 730 CG2316-PB 1..730 1..730 3738 100 Plus
Pmp70-PD 665 CG12703-PD 31..664 64..726 1014 35.9 Plus
Pmp70-PB 665 CG12703-PB 31..664 64..726 1014 35.9 Plus
Pmp70-PA 665 CG12703-PA 31..664 64..726 1014 35.9 Plus
Pmp70-PC 641 CG12703-PC 26..640 88..726 1013 36.4 Plus
Mdr50-PA 1313 CG8523-PA 1087..1268 520..694 165 29.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 08:50:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14078-PA 729 GI14078-PA 1..728 1..729 3252 82 Plus
Dmoj\GI15338-PA 666 GI15338-PA 63..665 105..726 1035 37.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 08:50:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18159-PA 733 GL18159-PA 1..732 1..729 3435 86.2 Plus
Dper\GL13065-PA 667 GL13065-PA 31..666 64..726 1069 36.8 Plus
Dper\GL10123-PA 1300 GL10123-PA 1074..1255 520..694 164 29 Plus
Dper\GL22524-PA 1284 GL22524-PA 437..625 519..703 161 27.4 Plus
Dper\GL10597-PA 1300 GL10597-PA 1074..1257 520..696 157 27.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 08:50:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11765-PA 667 GA11765-PA 31..666 64..726 1069 36.8 Plus
Dpse\GA15347-PA 157 GA15347-PA 1..156 574..729 804 92.9 Plus
Dpse\GA21135-PA 1313 GA21135-PA 1087..1268 520..694 165 29 Plus
Dpse\GA24563-PA 1323 GA24563-PA 435..623 519..703 164 27.9 Plus
Dpse\GA17746-PA 1300 GA17746-PA 1074..1257 520..696 157 27.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 08:50:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23229-PA 730 GM23229-PA 1..730 1..730 3852 97.8 Plus
Dsec\GM22994-PA 665 GM22994-PA 63..664 105..726 1039 36.6 Plus
Dsec\GM21523-PA 1313 GM21523-PA 1087..1268 520..694 172 29.4 Plus
Dsec\GM20322-PA 1302 GM20322-PA 1076..1259 520..696 161 28.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 08:50:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24389-PA 730 GD24389-PA 1..730 1..730 3865 98.1 Plus
Dsim\GD17461-PA 628 GD17461-PA 26..627 105..726 1039 36.6 Plus
Dsim\GD11033-PA 1313 GD11033-PA 1087..1268 520..694 173 29.9 Plus
Dsim\GD25800-PA 444 GD25800-PA 218..401 520..696 161 28.2 Plus
Dsim\GD13133-PA 1318 GD13133-PA 428..616 519..703 159 27.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 08:50:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15386-PA 732 GJ15386-PA 1..731 1..729 3261 81.9 Plus
Dvir\GJ14776-PA 666 GJ14776-PA 63..665 105..726 1063 37.5 Plus
Dvir\GJ22389-PA 1307 GJ22389-PA 1081..1262 520..694 162 28.9 Plus
Dvir\GJ20066-PA 1306 GJ20066-PA 1080..1261 520..694 160 27.8 Plus
Dvir\GJ22389-PA 1307 GJ22389-PA 445..624 520..694 158 29.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 08:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13610-PA 730 GK13610-PA 1..729 1..729 3408 85.8 Plus
Dwil\GK25160-PA 665 GK25160-PA 63..664 105..726 1045 37.4 Plus
Dwil\GK18492-PA 446 GK18492-PA 55..335 105..471 279 26.7 Plus
Dwil\GK18492-PA 446 GK18492-PA 365..445 645..726 234 48.8 Plus
Dwil\GK13599-PA 1325 GK13599-PA 435..626 519..705 159 27.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 08:50:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14525-PA 730 GE14525-PA 1..730 1..730 3774 95.6 Plus
Dyak\GE15877-PA 665 GE15877-PA 63..664 105..726 1046 36.8 Plus
Dyak\GE13568-PA 1311 GE13568-PA 1085..1266 520..694 173 29.9 Plus
Dyak\GE13568-PA 1311 GE13568-PA 448..627 520..694 158 29.3 Plus
Dyak\GE13408-PA 1302 GE13408-PA 1076..1259 520..696 158 27.7 Plus

LD29479.hyp Sequence

Translation from 92 to 2284

> LD29479.hyp
MSVLSKYVDRIAEKCEHNGFTKHAFSYALVTSAILALTIKVTIPYVKNVN
TTSSVRTQKGKTNGQLSPSTRDSSEEDFKLAEAEKLLVAQQLKKKATNNL
VEPGLNKEFLKHLQMLAKIMIPQAFCYETGLLSVHTFCLISRTFLSIYVA
ALEGALVKFIVRKDIKQFALVLLKWFGIAIPATFVNSMIRFLESKLSLAF
RTRLVRHSYRLYFKNQNYYRVSNLDGRIENADHRLTEDISVFANSVAHLY
SSLTKPCFDLMLIGLALMRSSKKMKANIITGPALSIGVIALTAHILRIVS
PKFGQLVSEEANRYGYLRHIHSRIITNAEEIAFYGGHKVEMQQLRQAYNR
LVNQMTTIFNQKLWFIMLEQFFMKYVWSGTGMIMVSLPILTGSDVGLGTV
PNTAISESRVSERTQYLTTARNLLISAADAIERLMSSYKEIVSLAGYTFR
VAGMMDVFEETALGVYCKTSVMESNQSNGIIEFRNGKPIAKGRIIYSDDP
KNMSISLRAVPVVTPNCDIVVPKLTLCIEPGVHLLITGPNGCGKSSLFRI
LSGLWPIYAGELHIPRPVKDVPCMFYIPQRPYMSIGSLCDQIIYPDTRED
MKRKHITENELRSILKMVSLEHIAQRDSFDVVRDWKDILSGGEKQRMAIA
RLFYHRPRYALLDECTSAVSIDVESSIYEIAKGMGITLLTITHRPTLWKY
HTHILEFDGLGNWQFRKMNSDEEQKGQFLS*

LD29479.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG2316-PH 730 CG2316-PH 1..730 1..730 3738 100 Plus
CG2316-PC 730 CG2316-PC 1..730 1..730 3738 100 Plus
CG2316-PD 730 CG2316-PD 1..730 1..730 3738 100 Plus
CG2316-PA 730 CG2316-PA 1..730 1..730 3738 100 Plus
CG2316-PG 730 CG2316-PG 1..730 1..730 3738 100 Plus