Clone LD29525 Report

Search the DGRC for LD29525

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:295
Well:25
Vector:pOT2
Associated Gene/Transcriptalt-RG
Protein status:LD29525.pep: gold
Preliminary Size:3386
Sequenced Size:3003

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18212 2001-07-04 Blastp of sequenced clone
CG18212 2003-01-01 Sim4 clustering to Release 3
alt 2008-04-29 Release 5.5 accounting
alt 2008-08-15 Release 5.9 accounting
alt 2008-12-18 5.12 accounting

Clone Sequence Records

LD29525.complete Sequence

3003 bp (3003 high quality bases) assembled on 2001-07-04

GenBank Submission: AY051768

> LD29525.complete
AAAAGAAGAAGGAAAAGAAAGACTGCATTGTAAATGTGAAATGTTGTGAA
AATTGTTGACGTTGCAAGTGGCTTAAAATCGGCTGAAAATCAGCGTTAGA
AGTATAGAGACTGGAGATAAGAAGGGGAGAGCGGTGTACATGTATGTGTC
ATTCGCAAAGGAGATCCCTGAGAAAAATCCACGGCTAAACCGGAAAGATA
TGCAAATATGGACTTCCACATACTGATCGTCATCGGTTGTGTGGTCAGCG
CCTCGCTGCTCTCGTTCCTGTTCATCAACAAGATCTTCCGGCGCAAGACT
TTTGAGGAGGTGGTAGCCGAGAAGCGTGCCCTGAGCGCCAATCTCTACAA
GGCGGCCGGTGGTGCCGCTACCAAGAAGCCCAAGAAGAAGGAACTTAAGC
GCGAAAAGAAGCAACGTCAGCGGGAACAGCAGAGGGATGTGAACAACGAG
CCGGAACCAGAGGAAGCCGAAGACTACTCCGATGGTCAGTCGGAGGGTCA
GGGCTCCGTGGCTGGCGAGGAACCCGGTCTCTCCAAGCAGCATGTTGAAT
TTGAACCCGATGCAGAGGTCCTCACTGATCAGCGACGACCCAGTAGCGTG
GCTGAGAAGGAGAACCAACCTTCTGGGGCTGGCAAAAAGGGAAAGAAGGA
TAAACGTAACGGAGCCAACAACAAGACAGCCGGAATCCTGGTCAACAAGA
ACGAAACTGTTGCTGTTAAGCCTGCAGCTAACGCCGAGGAGACACCAACT
TTGAATAATTTTGAAACCAAGATCCCCAAGGATGTGGTGGAGCTGAAGAA
GCAAGAGCAAAAGGAACGCAAAGAAGACAACAACAACAAGCAGCAAAGTC
AGAAAAAGATCGCCGGAGGCAATGTGTCCAAGAAGGAGAAGGTCGTAGCT
GTCGAAACAGAGGCACCCGTAGTGACCAAGCAGATCCTCAAGCAACAGCA
GCAGCAGCAGAATGGCTCACCCAAAACGCAACACAACCAGGCCAACAACA
AAACCAAGCAGCAGCAGCAAAACAAGAAACAGAATCAAAAGGAAACCCTA
ACGGGTAAGGATTTGGCTCATGCTTTGGATAAACTGGCCGATCACCAGAA
CCAGACCATTGGTGTCAACGCTCTGATGAACGTATTTTCTCGTGCCGAGC
TAAATCGCTCAGAGATTCAGATACTCATCGACTATCTGCTAAACAAGCAA
CAGGATATGCCCGCTTCGCACTCTGAGTGGTCGGATGACATCTGCCAGAA
ACTCAAGCGTCAGCTGGAAGAGAAGGAAAAGCTGTTGGCCGAGGAGCAGG
AGGCCTCCATCGGAATTCAGGCTAAGCTTCGCGAACTACGCCAAGAGGTT
AACACAGAACGCGCCCAGATGCATGCCCGAAACCAGGCTTATATCGATAA
GTTGCAAGGCAAGGAGCAGGAGCTAGCCGCCCTCAACCAGGAGCTGTCCA
GTCTGAATGACAAGTTGACGCTTGAGCGTCAACAGCTTACGACCCTTCGG
AGGGAGAAGCAAGCCAATTCGCAGGATCTGGTTCAGTTGCAACATTTGCA
ACAGGATCTCGCACACAAGGAAAAGTGCCTGGCGGAAATGACCGCATTCG
TTAATGCAGAGACCCAGCAGAAGAACGAGGTGATTCAGCAGCAGGCTCAG
CAGCTGCAAGCCCTGGAGCTGCAACGCGAAGAGCTGGAAGCGCGCCAGAA
CAATAGCATCTTTGAGCTAGAGCAGCGCAAGCAGCTGGAGGCGGAGAACG
CCGACCTCAAGCAGGAGCTGAGCGCTGTTCAACAGACTCAGTCGGAGCTG
CAGCGCGTCCACGCCGCCGAGTTGCAGGAGCTGCGACAGAACTTGTCCGT
CCTAGAGGCTCGCAACGTTGCGCTCAGCCAACAGCTCACCCAAGCCGCCA
ACAGCGCGGTTCAGGCCACCGCCGCCCAGTCGGAGCAGGCCCAGGTTCAG
ACCGAAGCGCTGGCCCAGAAGCAGCAGGAGCTGAGTGCTCTTCGCTCGCA
GGTCGGCTCGCTGACGGATGCCCACGCCCAGCAGCAGAAGCAAGCCAACG
CTCTGCAGTCGCAGCTCCAGGAGGCTCAACAGCGGGCCGAGCAGCTGCAG
GCTAAGGAGCAACATCTGCAACAGGAGCTCCAGGAGCAGCGGGAGAAAAA
TAATGACGTGCGTATGAAAAATTGGAAGTTGATTGAAGCGTTGCAAAATG
CCGAAGCATTAACAGCTAAGACGAAAACAAATTCAGCGCAGTCCGTAGGC
CAACAACACAAAGAGCTGCAGCTGCAGCAACAGAAGGCAGTGGCCGCCAA
TGGCGGGGGTAGTGCCAGTTCAGCCAAGAGCGAGCAGCAGAGGATCCGGG
ATCTCTACCAGCGCCTTTATCCCGACGCTGTGAAAGCGCAGTCGGGAAAT
GCCCTGCAAGCATCCTTTGACCAGTGGCTGGAACAGGTCCTGGCCACCCA
TGTCAAGCAGCAACAGGATAAGCTGCGGCAGAAGCTCGACGCGGAGAAGT
CCGAGAAGCAGAGCAGCAGTAGTCATAAGTCCACACAATCAAGCAACAGT
AGCAGTAGCAACCACAATAGCACCCACAACAATATTAGTAGCAATAATAG
TAGTTCGAATAGCCAATCCTCCTCCGCCGCCGAGCAGCAGGAGCTGCACA
AACAGAACCTGCAGCTGCGGGAGTGCAACGACAAGCTCACCCAGCTGGTC
ACCAAGACGACAAACACATTGATGGACTTGGAAGAGCGTGCTCGTGAGCA
GGACGAGCACTGGCGTGGCATCGTCGAGCAGAAGGAGCAGCTGATCCTAA
CCCTGCAGCAGCATGCCTCAAACGGAGAATAGGACATTTAATGTCGAAAC
AGATGCGGAAAGGGAAGAGGAGGCCAACAACGACGATAAACTGACAAGCA
ACCGCAGAGTTTGTCCAACTTCCAAAAGAACAGCAACAGTAAAAAAGAAA
CAACTCTAACAATCTATTAAGTTTAAAGTTAATGTAAAAAAAAAAAAAAA
AAA

LD29525.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:31:35
Subject Length Description Subject Range Query Range Score Percent Strand
alt.f 4201 alt.f 277..3274 1..2998 14975 99.9 Plus
alt-RG 3475 alt-RG 1..2998 1..2998 14975 99.9 Plus
alt.e 3925 alt.e 1..2998 1..2998 14975 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 13:40:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 13501171..13502512 1491..150 6680 99.9 Minus
chr3R 27901430 chr3R 13500420..13501084 2155..1491 3325 100 Minus
chr3R 27901430 chr3R 13499409..13499867 2709..2251 2295 100 Minus
chr3R 27901430 chr3R 13499005..13499159 2985..2831 775 100 Minus
chr3R 27901430 chr3R 13506434..13506582 149..1 745 100 Minus
chr3R 27901430 chr3R 13499222..13499346 2833..2709 625 100 Minus
chr3R 27901430 chr3R 13499976..13500071 2250..2155 480 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:22:47 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 13:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17676837..17678178 1491..150 6710 100 Minus
3R 32079331 3R 17676086..17676750 2155..1491 3325 100 Minus
3R 32079331 3R 17675075..17675533 2709..2251 2295 100 Minus
3R 32079331 3R 17674658..17674825 2998..2831 825 99.4 Minus
3R 32079331 3R 17682095..17682243 149..1 745 100 Minus
3R 32079331 3R 17674888..17675012 2833..2709 625 100 Minus
3R 32079331 3R 17675642..17675737 2250..2155 480 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 17417668..17419009 1491..150 6710 100 Minus
3R 31820162 3R 17416917..17417581 2155..1491 3325 100 Minus
3R 31820162 3R 17415906..17416364 2709..2251 2295 100 Minus
3R 31820162 3R 17415489..17415656 2998..2831 825 99.4 Minus
3R 31820162 3R 17422926..17423074 149..1 745 100 Minus
3R 31820162 3R 17415719..17415843 2833..2709 625 100 Minus
3R 31820162 3R 17416473..17416568 2250..2155 480 100 Minus
Blast to na_te.dros performed 2019-03-15 13:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2436 904..1036 199 66.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6702..6849 897..1043 187 64.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6729..6834 941..1043 178 69.2 Plus
roo 9092 roo DM_ROO 9092bp 1054..1164 2022..2129 178 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6728..6921 828..1022 177 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6756..6902 897..1045 171 63.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6732..6876 906..1037 170 65.8 Plus
roo 9092 roo DM_ROO 9092bp 1059..1143 950..1037 152 69.7 Plus
roo 9092 roo DM_ROO 9092bp 1065..1153 929..1025 149 70.4 Plus
roo 9092 roo DM_ROO 9092bp 1065..1152 2512..2599 143 62.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2304..2405 940..1044 139 61.9 Plus
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4505..4611 939..1044 133 66.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2595..2694 940..1039 130 61.4 Plus

LD29525.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 13:42:11 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 13499005..13499157 2833..2985 100 <- Minus
chr3R 13499223..13499345 2710..2832 100 <- Minus
chr3R 13499409..13499867 2251..2709 100 <- Minus
chr3R 13499976..13500071 2155..2250 100 <- Minus
chr3R 13500421..13501083 1492..2154 100 <- Minus
chr3R 13501171..13502512 150..1491 99 <- Minus
chr3R 13506434..13506582 1..149 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:10:02 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2625 208..2832 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:20:19 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2625 208..2832 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 22:08:29 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2625 208..2832 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:51:56 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2625 208..2832 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:37:09 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2625 208..2832 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:16:37 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2985 1..2985 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:20:19 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2985 1..2985 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 22:08:29 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2985 1..2985 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:51:57 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2985 1..2985 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:37:09 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
alt-RG 1..2985 1..2985 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:42:11 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17674671..17674823 2833..2985 100 <- Minus
3R 17674889..17675011 2710..2832 100 <- Minus
3R 17675075..17675533 2251..2709 100 <- Minus
3R 17675642..17675737 2155..2250 100 <- Minus
3R 17676087..17676749 1492..2154 100 <- Minus
3R 17676837..17678178 150..1491 100 <- Minus
3R 17682095..17682243 1..149 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:42:11 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17674671..17674823 2833..2985 100 <- Minus
3R 17674889..17675011 2710..2832 100 <- Minus
3R 17675075..17675533 2251..2709 100 <- Minus
3R 17675642..17675737 2155..2250 100 <- Minus
3R 17676087..17676749 1492..2154 100 <- Minus
3R 17676837..17678178 150..1491 100 <- Minus
3R 17682095..17682243 1..149 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 13:42:11 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17674671..17674823 2833..2985 100 <- Minus
3R 17674889..17675011 2710..2832 100 <- Minus
3R 17675075..17675533 2251..2709 100 <- Minus
3R 17675642..17675737 2155..2250 100 <- Minus
3R 17676087..17676749 1492..2154 100 <- Minus
3R 17676837..17678178 150..1491 100 <- Minus
3R 17682095..17682243 1..149 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 22:08:29 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 13501364..13501459 2155..2250 100 <- Minus
arm_3R 13500393..13500545 2833..2985 100 <- Minus
arm_3R 13500611..13500733 2710..2832 100 <- Minus
arm_3R 13500797..13501255 2251..2709 100 <- Minus
arm_3R 13501809..13502471 1492..2154 100 <- Minus
arm_3R 13502559..13503900 150..1491 100 <- Minus
arm_3R 13507817..13507965 1..149 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:30:25 Download gff for LD29525.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17415502..17415654 2833..2985 100 <- Minus
3R 17415720..17415842 2710..2832 100 <- Minus
3R 17415906..17416364 2251..2709 100 <- Minus
3R 17416473..17416568 2155..2250 100 <- Minus
3R 17416918..17417580 1492..2154 100 <- Minus
3R 17417668..17419009 150..1491 100 <- Minus
3R 17422926..17423074 1..149 100   Minus

LD29525.pep Sequence

Translation from 207 to 2831

> LD29525.pep
MDFHILIVIGCVVSASLLSFLFINKIFRRKTFEEVVAEKRALSANLYKAA
GGAATKKPKKKELKREKKQRQREQQRDVNNEPEPEEAEDYSDGQSEGQGS
VAGEEPGLSKQHVEFEPDAEVLTDQRRPSSVAEKENQPSGAGKKGKKDKR
NGANNKTAGILVNKNETVAVKPAANAEETPTLNNFETKIPKDVVELKKQE
QKERKEDNNNKQQSQKKIAGGNVSKKEKVVAVETEAPVVTKQILKQQQQQ
QNGSPKTQHNQANNKTKQQQQNKKQNQKETLTGKDLAHALDKLADHQNQT
IGVNALMNVFSRAELNRSEIQILIDYLLNKQQDMPASHSEWSDDICQKLK
RQLEEKEKLLAEEQEASIGIQAKLRELRQEVNTERAQMHARNQAYIDKLQ
GKEQELAALNQELSSLNDKLTLERQQLTTLRREKQANSQDLVQLQHLQQD
LAHKEKCLAEMTAFVNAETQQKNEVIQQQAQQLQALELQREELEARQNNS
IFELEQRKQLEAENADLKQELSAVQQTQSELQRVHAAELQELRQNLSVLE
ARNVALSQQLTQAANSAVQATAAQSEQAQVQTEALAQKQQELSALRSQVG
SLTDAHAQQQKQANALQSQLQEAQQRAEQLQAKEQHLQQELQEQREKNND
VRMKNWKLIEALQNAEALTAKTKTNSAQSVGQQHKELQLQQQKAVAANGG
GSASSAKSEQQRIRDLYQRLYPDAVKAQSGNALQASFDQWLEQVLATHVK
QQQDKLRQKLDAEKSEKQSSSSHKSTQSSNSSSSNHNSTHNNISSNNSSS
NSQSSSAAEQQELHKQNLQLRECNDKLTQLVTKTTNTLMDLEERAREQDE
HWRGIVEQKEQLILTLQQHASNGE*

LD29525.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:23:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17176-PA 872 GF17176-PA 1..869 1..874 2876 81.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:23:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16761-PA 876 GG16761-PA 1..876 1..874 3503 93.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:23:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19521-PA 943 GH19521-PA 1..940 1..874 2200 60.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:17:43
Subject Length Description Subject Range Query Range Score Percent Strand
alt-PI 874 CG18212-PI 1..874 1..874 4333 100 Plus
alt-PG 874 CG18212-PG 1..874 1..874 4333 100 Plus
alt-PH 842 CG18212-PH 1..842 1..874 4132 96.3 Plus
alt-PB 842 CG18212-PB 1..842 1..874 4132 96.3 Plus
alt-PD 842 CG18212-PD 1..842 1..874 4132 96.3 Plus
alt-PA 842 CG18212-PA 1..842 1..874 4132 96.3 Plus
alt-PE 842 CG18212-PE 1..842 1..874 4132 96.3 Plus
alt-PF 842 CG18212-PF 1..842 1..874 4132 96.3 Plus
Gmap-PC 1208 CG33206-PC 449..993 188..683 296 23.8 Plus
Gmap-PB 1208 CG33206-PB 449..993 188..683 296 23.8 Plus
Gmap-PA 1398 CG33206-PA 639..1183 188..683 296 23.8 Plus
CLIP-190-PN 1598 CG5020-PN 674..1493 29..812 292 21.6 Plus
CLIP-190-PR 1601 CG5020-PR 677..1496 29..812 292 21.6 Plus
CLIP-190-PP 1623 CG5020-PP 699..1518 29..812 292 21.6 Plus
CLIP-190-PC 1652 CG5020-PC 728..1547 29..812 292 21.6 Plus
CLIP-190-PS 1653 CG5020-PS 729..1548 29..812 292 21.6 Plus
CLIP-190-PM 1668 CG5020-PM 744..1563 29..812 292 21.6 Plus
CLIP-190-PB 1689 CG5020-PB 765..1584 29..812 292 21.6 Plus
CLIP-190-PA 1690 CG5020-PA 766..1585 29..812 292 21.6 Plus
Golgin245-PA 1489 CG3493-PA 535..1338 45..830 274 20.4 Plus
zip-PH 1964 CG15792-PH 942..1613 177..868 263 21.8 Plus
zip-PG 1971 CG15792-PG 934..1605 177..868 263 21.8 Plus
zip-PE 1971 CG15792-PE 934..1605 177..868 263 21.8 Plus
zip-PC 1971 CG15792-PC 934..1605 177..868 263 21.8 Plus
zip-PF 1979 CG15792-PF 942..1613 177..868 263 21.8 Plus
zip-PB 2011 CG15792-PB 974..1645 177..868 263 21.8 Plus
zip-PD 2016 CG15792-PD 979..1650 177..868 263 21.8 Plus
zip-PI 2024 CG15792-PI 987..1658 177..868 263 21.8 Plus
zip-PA 2056 CG15792-PA 1019..1690 177..868 263 21.8 Plus
zip-PG 1971 CG15792-PG 1251..1962 28..709 257 22.6 Plus
zip-PE 1971 CG15792-PE 1251..1962 28..709 257 22.6 Plus
zip-PC 1971 CG15792-PC 1251..1962 28..709 257 22.6 Plus
zip-PF 1979 CG15792-PF 1259..1970 28..709 257 22.6 Plus
zip-PB 2011 CG15792-PB 1291..2002 28..709 257 22.6 Plus
zip-PD 2016 CG15792-PD 1296..2007 28..709 257 22.6 Plus
zip-PI 2024 CG15792-PI 1304..2015 28..709 257 22.6 Plus
zip-PA 2056 CG15792-PA 1336..2047 28..709 257 22.6 Plus
CLIP-190-PN 1598 CG5020-PN 466..1345 59..871 256 20.7 Plus
CLIP-190-PR 1601 CG5020-PR 469..1348 59..871 256 20.7 Plus
CLIP-190-PP 1623 CG5020-PP 491..1370 59..871 256 20.7 Plus
CLIP-190-PC 1652 CG5020-PC 520..1399 59..871 256 20.7 Plus
CLIP-190-PM 1668 CG5020-PM 536..1415 59..871 256 20.7 Plus
CLIP-190-PB 1689 CG5020-PB 557..1436 59..871 256 20.7 Plus
CLIP-190-PA 1690 CG5020-PA 558..1437 59..871 256 20.7 Plus
lva-PD 2779 CG6450-PD 982..1688 161..849 251 21.5 Plus
lva-PC 2779 CG6450-PC 982..1688 161..849 251 21.5 Plus
Gmap-PC 1208 CG33206-PC 362..936 293..849 247 23.1 Plus
Gmap-PB 1208 CG33206-PB 362..936 293..849 247 23.1 Plus
Gmap-PA 1398 CG33206-PA 552..1126 293..849 247 23.1 Plus
Golgin245-PA 1489 CG3493-PA 291..1087 144..868 247 18.9 Plus
zip-PH 1964 CG15792-PH 1259..1938 28..678 239 22.7 Plus
Mhc-PL 1936 CG17927-PL 878..1676 34..859 239 20 Plus
Mhc-PM 1936 CG17927-PM 878..1676 34..859 239 20 Plus
Mhc-PK 1936 CG17927-PK 878..1676 34..859 239 20 Plus
Mhc-PP 1949 CG17927-PP 878..1676 34..859 239 20 Plus
Mhc-PV 1962 CG17927-PV 878..1676 34..859 239 20 Plus
Mhc-PS 1962 CG17927-PS 878..1676 34..859 239 20 Plus
Mhc-PB 1962 CG17927-PB 878..1676 34..859 239 20 Plus
Mhc-PU 1949 CG17927-PU 878..1676 34..859 238 20.2 Plus
Mhc-PU 1949 CG17927-PU 1041..1915 29..845 238 20.8 Plus
Mhc-PN 1949 CG17927-PN 878..1676 34..859 238 20.2 Plus
Mhc-PN 1949 CG17927-PN 1041..1915 29..845 238 20.8 Plus
Mhc-PE 1962 CG17927-PE 878..1676 34..859 238 20.2 Plus
Mhc-PE 1962 CG17927-PE 1041..1915 29..845 238 20.8 Plus
Mhc-PH 1962 CG17927-PH 878..1676 34..859 238 20.2 Plus
Mhc-PH 1962 CG17927-PH 1041..1915 29..845 238 20.8 Plus
Mhc-PT 1962 CG17927-PT 878..1676 34..859 238 20.2 Plus
Mhc-PT 1962 CG17927-PT 1041..1915 29..845 238 20.8 Plus
Mhc-PO 1962 CG17927-PO 878..1676 34..859 238 20.2 Plus
Mhc-PO 1962 CG17927-PO 1041..1915 29..845 238 20.8 Plus
Mhc-PF 1962 CG17927-PF 878..1676 34..859 238 20.2 Plus
Mhc-PF 1962 CG17927-PF 1041..1915 29..845 238 20.8 Plus
Mhc-PQ 1962 CG17927-PQ 878..1676 34..859 238 20.2 Plus
Mhc-PQ 1962 CG17927-PQ 1041..1915 29..845 238 20.8 Plus
Mhc-PI 1962 CG17927-PI 878..1676 34..859 238 20.2 Plus
Mhc-PI 1962 CG17927-PI 1041..1915 29..845 238 20.8 Plus
Mhc-PG 1962 CG17927-PG 878..1676 34..859 238 20.2 Plus
Mhc-PG 1962 CG17927-PG 1041..1915 29..845 238 20.8 Plus
Mhc-PA 1962 CG17927-PA 878..1676 34..859 238 20.2 Plus
Mhc-PA 1962 CG17927-PA 1041..1915 29..845 238 20.8 Plus
Mhc-PD 1962 CG17927-PD 878..1676 34..859 238 20.2 Plus
Mhc-PD 1962 CG17927-PD 1041..1915 29..845 238 20.8 Plus
Mhc-PC 1962 CG17927-PC 878..1676 34..859 238 20.2 Plus
Mhc-PC 1962 CG17927-PC 1041..1915 29..845 238 20.8 Plus
CLIP-190-PS 1653 CG5020-PS 521..1324 59..872 232 20 Plus
CLIP-190-PS 1653 CG5020-PS 336..1051 153..844 228 18.9 Plus
zip-PH 1964 CG15792-PH 886..1387 347..874 228 22.6 Plus
zip-PG 1971 CG15792-PG 878..1379 347..874 228 22.6 Plus
zip-PE 1971 CG15792-PE 878..1379 347..874 228 22.6 Plus
zip-PC 1971 CG15792-PC 878..1379 347..874 228 22.6 Plus
zip-PF 1979 CG15792-PF 886..1387 347..874 228 22.6 Plus
zip-PB 2011 CG15792-PB 918..1419 347..874 228 22.6 Plus
zip-PD 2016 CG15792-PD 923..1424 347..874 228 22.6 Plus
zip-PI 2024 CG15792-PI 931..1432 347..874 228 22.6 Plus
zip-PA 2056 CG15792-PA 963..1464 347..874 228 22.6 Plus
Mhc-PL 1936 CG17927-PL 1041..1915 29..845 228 20 Plus
Mhc-PM 1936 CG17927-PM 1041..1915 29..845 228 20 Plus
Mhc-PK 1936 CG17927-PK 1041..1915 29..845 228 20 Plus
Mhc-PP 1949 CG17927-PP 1041..1915 29..845 228 20 Plus
Mhc-PV 1962 CG17927-PV 1041..1915 29..845 228 20 Plus
Mhc-PS 1962 CG17927-PS 1041..1915 29..845 228 20 Plus
Mhc-PB 1962 CG17927-PB 1041..1915 29..845 228 20 Plus
CLIP-190-PN 1598 CG5020-PN 320..996 193..844 216 19 Plus
CLIP-190-PR 1601 CG5020-PR 323..999 193..844 216 19 Plus
CLIP-190-PP 1623 CG5020-PP 345..1021 193..844 216 19 Plus
CLIP-190-PC 1652 CG5020-PC 374..1050 193..844 216 19 Plus
CLIP-190-PM 1668 CG5020-PM 390..1066 193..844 216 19 Plus
CLIP-190-PB 1689 CG5020-PB 411..1087 193..844 216 19 Plus
CLIP-190-PA 1690 CG5020-PA 412..1088 193..844 216 19 Plus
lva-PD 2779 CG6450-PD 329..1228 65..872 214 20.4 Plus
lva-PC 2779 CG6450-PC 329..1228 65..872 214 20.4 Plus
Gmap-PC 1208 CG33206-PC 507..1168 191..812 213 22.5 Plus
Gmap-PB 1208 CG33206-PB 507..1168 191..812 213 22.5 Plus
Gmap-PA 1398 CG33206-PA 697..1358 191..812 213 22.5 Plus
lva-PD 2779 CG6450-PD 1419..2038 232..874 209 20.8 Plus
lva-PC 2779 CG6450-PC 1419..2038 232..874 209 20.8 Plus
zip-PH 1964 CG15792-PH 1013..1874 28..851 208 18.8 Plus
zip-PG 1971 CG15792-PG 1005..1866 28..851 208 18.8 Plus
zip-PE 1971 CG15792-PE 1005..1866 28..851 208 18.8 Plus
zip-PC 1971 CG15792-PC 1005..1866 28..851 208 18.8 Plus
zip-PF 1979 CG15792-PF 1013..1874 28..851 208 18.8 Plus
zip-PB 2011 CG15792-PB 1045..1906 28..851 208 18.8 Plus
zip-PD 2016 CG15792-PD 1050..1911 28..851 208 18.8 Plus
zip-PI 2024 CG15792-PI 1058..1919 28..851 208 18.8 Plus
zip-PA 2056 CG15792-PA 1090..1951 28..851 208 18.8 Plus
lva-PD 2779 CG6450-PD 2136..2696 248..827 206 23.6 Plus
lva-PC 2779 CG6450-PC 2136..2696 248..827 206 23.6 Plus
lva-PD 2779 CG6450-PD 1963..2539 311..870 200 22.4 Plus
lva-PC 2779 CG6450-PC 1963..2539 311..870 200 22.4 Plus
lva-PD 2779 CG6450-PD 246..784 348..859 192 22.5 Plus
lva-PC 2779 CG6450-PC 246..784 348..859 192 22.5 Plus
Mhc-PU 1949 CG17927-PU 850..1360 352..862 171 20.5 Plus
Mhc-PN 1949 CG17927-PN 850..1360 352..862 171 20.5 Plus
Mhc-PE 1962 CG17927-PE 850..1360 352..862 171 20.5 Plus
Mhc-PH 1962 CG17927-PH 850..1360 352..862 171 20.5 Plus
Mhc-PT 1962 CG17927-PT 850..1360 352..862 171 20.5 Plus
Mhc-PO 1962 CG17927-PO 850..1360 352..862 171 20.5 Plus
Mhc-PF 1962 CG17927-PF 850..1360 352..862 171 20.5 Plus
Mhc-PQ 1962 CG17927-PQ 850..1360 352..862 171 20.5 Plus
Mhc-PI 1962 CG17927-PI 850..1360 352..862 171 20.5 Plus
Mhc-PG 1962 CG17927-PG 850..1360 352..862 171 20.5 Plus
Mhc-PA 1962 CG17927-PA 850..1360 352..862 171 20.5 Plus
Mhc-PD 1962 CG17927-PD 850..1360 352..862 171 20.5 Plus
Mhc-PC 1962 CG17927-PC 850..1360 352..862 171 20.5 Plus
Mhc-PL 1936 CG17927-PL 850..1360 352..862 161 19.8 Plus
Mhc-PM 1936 CG17927-PM 850..1360 352..862 161 19.8 Plus
Mhc-PK 1936 CG17927-PK 850..1360 352..862 161 19.8 Plus
Mhc-PP 1949 CG17927-PP 850..1360 352..862 161 19.8 Plus
Mhc-PV 1962 CG17927-PV 850..1360 352..862 161 19.8 Plus
Mhc-PS 1962 CG17927-PS 850..1360 352..862 161 19.8 Plus
Mhc-PB 1962 CG17927-PB 850..1360 352..862 161 19.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:23:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22998-PA 909 GI22998-PA 1..906 1..874 2366 64.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:23:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22310-PA 840 GL22310-PA 205..837 252..874 1672 68 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14840-PA 931 GA14840-PA 1..928 1..874 2602 70.1 Plus
Dpse\GA14840-PB 906 GA14840-PB 1..893 1..874 2519 69.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:23:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15350-PA 719 GM15350-PA 22..353 21..352 1732 97.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:23:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20219-PA 795 GD20219-PA 1..795 1..874 3092 88.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:23:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24591-PA 907 GJ24591-PA 1..904 1..874 2282 64.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:23:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13790-PA 912 GK13790-PA 1..909 1..874 2613 66.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:24:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25256-PA 870 GE25256-PA 1..870 1..874 3413 92.7 Plus

LD29525.hyp Sequence

Translation from 207 to 2831

> LD29525.hyp
MDFHILIVIGCVVSASLLSFLFINKIFRRKTFEEVVAEKRALSANLYKAA
GGAATKKPKKKELKREKKQRQREQQRDVNNEPEPEEAEDYSDGQSEGQGS
VAGEEPGLSKQHVEFEPDAEVLTDQRRPSSVAEKENQPSGAGKKGKKDKR
NGANNKTAGILVNKNETVAVKPAANAEETPTLNNFETKIPKDVVELKKQE
QKERKEDNNNKQQSQKKIAGGNVSKKEKVVAVETEAPVVTKQILKQQQQQ
QNGSPKTQHNQANNKTKQQQQNKKQNQKETLTGKDLAHALDKLADHQNQT
IGVNALMNVFSRAELNRSEIQILIDYLLNKQQDMPASHSEWSDDICQKLK
RQLEEKEKLLAEEQEASIGIQAKLRELRQEVNTERAQMHARNQAYIDKLQ
GKEQELAALNQELSSLNDKLTLERQQLTTLRREKQANSQDLVQLQHLQQD
LAHKEKCLAEMTAFVNAETQQKNEVIQQQAQQLQALELQREELEARQNNS
IFELEQRKQLEAENADLKQELSAVQQTQSELQRVHAAELQELRQNLSVLE
ARNVALSQQLTQAANSAVQATAAQSEQAQVQTEALAQKQQELSALRSQVG
SLTDAHAQQQKQANALQSQLQEAQQRAEQLQAKEQHLQQELQEQREKNND
VRMKNWKLIEALQNAEALTAKTKTNSAQSVGQQHKELQLQQQKAVAANGG
GSASSAKSEQQRIRDLYQRLYPDAVKAQSGNALQASFDQWLEQVLATHVK
QQQDKLRQKLDAEKSEKQSSSSHKSTQSSNSSSSNHNSTHNNISSNNSSS
NSQSSSAAEQQELHKQNLQLRECNDKLTQLVTKTTNTLMDLEERAREQDE
HWRGIVEQKEQLILTLQQHASNGE*

LD29525.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:40:55
Subject Length Description Subject Range Query Range Score Percent Strand
alt-PI 874 CG18212-PI 1..874 1..874 4333 100 Plus
alt-PG 874 CG18212-PG 1..874 1..874 4333 100 Plus
alt-PH 842 CG18212-PH 1..842 1..874 4132 96.3 Plus
alt-PB 842 CG18212-PB 1..842 1..874 4132 96.3 Plus
alt-PD 842 CG18212-PD 1..842 1..874 4132 96.3 Plus