BDGP Sequence Production Resources |
Search the DGRC for LD29573
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 295 |
Well: | 73 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8368-RA |
Protein status: | LD29573.pep: gold |
Sequenced Size: | 2504 |
Gene | Date | Evidence |
---|---|---|
CG8368 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8368 | 2008-04-29 | Release 5.5 accounting |
CG8368 | 2008-08-15 | Release 5.9 accounting |
CG8368 | 2008-12-18 | 5.12 accounting |
2504 bp (2504 high quality bases) assembled on 2005-08-02
GenBank Submission: BT023775
> LD29573.complete TTAAATCTTCGTGTTGACAAATTGAAATCTACTGAAAATCGAGTTAATTT AATAAAAGTTGCGTATTTTCGCCTGCAGCTTGAACGGTAAGCGCTCCAGG ATGAAGGAACATATGTCCACCAAGCAGCACGAGCGCAACGAGAAGAAGAA AAAGAAGCTGGCGGCCCTGGCGAACCTGATGGAGCTCAACGATCGCGATC GATTGCACGAGGCAGAGTTGGCCAAAAAACGCGATGCAGAGGTCGAAGTG GAGGAGAAGTCAACAGCGAAGGCGGAGGACGGGGACGACGGTTTCATCGT GGTGGGCAGCAAACGCAAGCCGCGAAACCGTCGTCAAAACAACGAGCTGG AGGCGGATTCACAGACTGCCCCAGGAACATCAGATCCTGAAGAGCCGGTG AACAAGAAAATCCGCAATTACGATGCTGGTGGAGATAGCCTGCCGCTGGA GATTGGCTCGCTATCCGAGGATCAGTACAATCAGTTGTCGGCAGAGTTGA GGCGTCGCAAACGGGAGCTGGAGAACGTACCGGCCTTGCGACTGCGTGAG ATGGGTCAGCGCGCCTCCCTGGAGACTCCGCAAGATGCTCGTACGCCCAT CTTTCTAACCGACATCCAGAACCTGTTGATGTGCGCTCTCATTGGCCAGA AGAGCCCCTGCCGTCCGGATCGCTGGTGCAGCGTGGAGAAGTGGCTCAGT CTGTCGCACAGTGTGGTGGTCATTCTGGAGGGACTATCTCTCTACCACTA TCTGTCTAACGAGACCCAGTTTGAGGCCACCAACAGGATATTCAGCACGA AGCTGGAGATGATACTTCCACCGCAGGAGGAGGGCCAGAAGATTATCGAC GAGATAGCCAAGATTCCTCTCACCAATGCGCAGGCACGCAGACTGATAGA CGAGCACGGCTCCCTGGAGTCGGCTGTGGAGCTGAACAAAGATCCAACTT TGTTTGTAAAGACAATCTTTCCAATCGAAAGCTCTAAATCTGAGTCGGAT GACATGCATGAGGATGACAAGTTCCCACGCACTAAGCTCCTGCTGTCAGC GCTGCAAATGGTCGACGAGGGCTATCCTATTCCATTGCAGGGCGAGCTAC ACACTCGTTTCCAAAACTTTAAGTTTACCAAGGATCTGTATGCACCGGTA ACCAATCGCAGTCCTATGTTCGGCGTTGATTGTGAAATGTGTCACACGGA GGCGGGTTGTAACGAGCTAACCCGAATCTCTATTGTCAACGAAAATTACG AGACCGTTTATGAAACGCTAGTGTTGCCAAATAACCGGATCACCGACTAT CTAACCCAATATTCGGGCATAACCGCAGAAATTATGGAGCAAGTGACCAA GAGGCTGGATGTTGTGCAAAAGGAAGTGTCCGAACTGCTGCCTCCAGATG CCATTCTGGTGGGGCAATCTCTAAATTCTGACTTGAACGCCATGAAAATG ATGCACCCGTATGTAATTGACACCAGCGTGTGCTTTAACACATCTGGGGT GCGACGACGCAAGACCAAGCTGAAGGATCTGGCCAAAACCTTTTTACAGG AAATTATCCAGGAGAACATCGATGGTCACGATTCCATTGAGGATTCGCGA GCCACGCTGAAGCTCGTCAAGAAGAAGCTGGCAAACAGCATCGAGTTCGG AGACCAGATCCTCACGCAGCACAAGCAATTACAGGAGTTGGCGAACGCAT CCAGCGGTGATACCATATCCAACAATCTGTTTGCACATGTGGCAAAGCGG GATAAGCGCACGGCCATTGTCACGGTCGGCGAGCTGCAGCCCCGTCTAAA GGAAGTGATCGAAAAGGCGGGAGAGGCAGCGCCCAAGGATCAAAGTACGT CGGTGCATGTCCACGAGGTATCTACGGCCAAGGAAGCCATTCGGAAGGTC AATGAAGTTGCACTGGAAAATGCCCTGACAATTGCCAACCTCCGCGTGCC AGAGCAGGACTTTATATTGGACAGTGCACAGCGGAGTGTTGCCAAACTGG ACAAGACCATTGATCGCCTGTGGAAGTCAGTTGCGCACAACGGACTCTTC CTCGTCATCATGGGCGGATCCACAGAGTGCTCGAAGGGTGTAGCCAAAAT AGCCATCAAGCGACTAAACGGATCGAATCAGACTATGGAAAGTTAGGGAG CTTTTAAGAACCTTACTTATGCTAACCGCCTCCATGGATACCCGCTCCCA CTAAGGTCCTGAGTGTTGAAATCCAGCAGATAAATCAAATTTACCGTATC ACACTGAAGACATGACCAACAGTTGCATTACCATACACCTGGGAAATGTC CTGCATGCATGAGTGCATCGATGAAAAATTGTAAAATTAAAAACAAATTC GATCAATAACGAATAATAAAATGTACATTTAATTTTTTTCACAAAATTCC ATTGGCTTCTGCATAGTTGTATTAAATTAAATGAGCGGTAAAAATTATTA TGGATTATTGTATAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 6598626..6599487 | 1..862 | 99 | -> | Plus |
chr3L | 6599544..6601148 | 863..2467 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RA | 1..2046 | 101..2146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RA | 1..2046 | 101..2146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RB | 1..2046 | 101..2146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RA | 1..2046 | 101..2146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RB | 1..2046 | 101..2146 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RA | 19..2485 | 1..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RA | 19..2485 | 1..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RA | 39..2505 | 1..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RA | 19..2485 | 1..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8368-RA | 39..2505 | 1..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6606217..6607078 | 1..862 | 100 | -> | Plus |
3L | 6607135..6608739 | 863..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6606217..6607078 | 1..862 | 100 | -> | Plus |
3L | 6607135..6608739 | 863..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6606217..6607078 | 1..862 | 100 | -> | Plus |
3L | 6607135..6608739 | 863..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 6599317..6600178 | 1..862 | 100 | -> | Plus |
arm_3L | 6600235..6601839 | 863..2467 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 6599317..6600178 | 1..862 | 100 | -> | Plus |
3L | 6600235..6601839 | 863..2467 | 100 | Plus |
Translation from 100 to 2145
> LD29573.pep MKEHMSTKQHERNEKKKKKLAALANLMELNDRDRLHEAELAKKRDAEVEV EEKSTAKAEDGDDGFIVVGSKRKPRNRRQNNELEADSQTAPGTSDPEEPV NKKIRNYDAGGDSLPLEIGSLSEDQYNQLSAELRRRKRELENVPALRLRE MGQRASLETPQDARTPIFLTDIQNLLMCALIGQKSPCRPDRWCSVEKWLS LSHSVVVILEGLSLYHYLSNETQFEATNRIFSTKLEMILPPQEEGQKIID EIAKIPLTNAQARRLIDEHGSLESAVELNKDPTLFVKTIFPIESSKSESD DMHEDDKFPRTKLLLSALQMVDEGYPIPLQGELHTRFQNFKFTKDLYAPV TNRSPMFGVDCEMCHTEAGCNELTRISIVNENYETVYETLVLPNNRITDY LTQYSGITAEIMEQVTKRLDVVQKEVSELLPPDAILVGQSLNSDLNAMKM MHPYVIDTSVCFNTSGVRRRKTKLKDLAKTFLQEIIQENIDGHDSIEDSR ATLKLVKKKLANSIEFGDQILTQHKQLQELANASSGDTISNNLFAHVAKR DKRTAIVTVGELQPRLKEVIEKAGEAAPKDQSTSVHVHEVSTAKEAIRKV NEVALENALTIANLRVPEQDFILDSAQRSVAKLDKTIDRLWKSVAHNGLF LVIMGGSTECSKGVAKIAIKRLNGSNQTMES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23543-PA | 703 | GF23543-PA | 1..696 | 1..677 | 2713 | 77.2 | Plus |
Dana\GF16301-PA | 1006 | GF16301-PA | 842..1005 | 350..514 | 334 | 43.6 | Plus |
Dana\GF21199-PA | 834 | GF21199-PA | 664..817 | 356..506 | 257 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15351-PA | 677 | GG15351-PA | 1..675 | 1..675 | 3260 | 92 | Plus |
Dere\GG11572-PA | 985 | GG11572-PA | 821..984 | 350..514 | 332 | 43 | Plus |
Dere\GG12883-PA | 773 | GG12883-PA | 606..757 | 356..506 | 273 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15165-PA | 698 | GH15165-PA | 3..683 | 1..675 | 2403 | 68.7 | Plus |
Dgri\GH16553-PA | 962 | GH16553-PA | 798..961 | 350..514 | 332 | 43 | Plus |
Dgri\GH17667-PA | 273 | GH17667-PA | 85..266 | 337..515 | 282 | 37.5 | Plus |
Dgri\GH15107-PA | 263 | GH15107-PA | 87..248 | 353..512 | 165 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Rexo5-PA | 681 | CG8368-PA | 1..681 | 1..681 | 3453 | 100 | Plus |
Rexo5-PB | 681 | CG8368-PB | 1..681 | 1..681 | 3453 | 100 | Plus |
CG12877-PC | 991 | CG12877-PC | 827..990 | 350..514 | 319 | 41.8 | Plus |
prage-PK | 742 | CG42666-PK | 575..726 | 356..506 | 250 | 38.6 | Plus |
prage-PI | 742 | CG42666-PI | 575..726 | 356..506 | 250 | 38.6 | Plus |
prage-PH | 742 | CG42666-PH | 575..726 | 356..506 | 250 | 38.6 | Plus |
prage-PG | 742 | CG42666-PG | 575..726 | 356..506 | 250 | 38.6 | Plus |
prage-PD | 742 | CG42666-PD | 575..726 | 356..506 | 250 | 38.6 | Plus |
prage-PF | 761 | CG42666-PF | 594..745 | 356..506 | 250 | 38.6 | Plus |
prage-PA | 761 | CG42666-PA | 594..745 | 356..506 | 250 | 38.6 | Plus |
prage-PC | 761 | CG42666-PC | 594..745 | 356..506 | 250 | 38.6 | Plus |
prage-PB | 787 | CG42666-PB | 620..771 | 356..506 | 250 | 38.6 | Plus |
prage-PJ | 852 | CG42666-PJ | 685..836 | 356..506 | 250 | 38.6 | Plus |
prage-PE | 852 | CG42666-PE | 685..836 | 356..506 | 250 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12104-PA | 686 | GI12104-PA | 1..671 | 1..674 | 2371 | 69.2 | Plus |
Dmoj\GI22024-PA | 988 | GI22024-PA | 821..987 | 345..514 | 329 | 41.8 | Plus |
Dmoj\GI11131-PA | 902 | GI11131-PA | 728..902 | 352..518 | 286 | 39.5 | Plus |
Dmoj\GI13758-PA | 275 | GI13758-PA | 105..266 | 353..512 | 155 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13270-PA | 690 | GL13270-PA | 1..684 | 1..678 | 2535 | 72.3 | Plus |
Dper\GL26761-PA | 822 | GL26761-PA | 601..806 | 315..506 | 257 | 34.1 | Plus |
Dper\GL13711-PA | 117 | GL13711-PA | 2..116 | 400..514 | 207 | 41.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21025-PA | 709 | GA21025-PA | 1..703 | 1..678 | 2523 | 70.6 | Plus |
Dpse\GA11877-PA | 949 | GA11877-PA | 785..948 | 350..514 | 335 | 44.2 | Plus |
Dpse\GA13257-PA | 817 | GA13257-PA | 596..801 | 315..506 | 257 | 34.1 | Plus |
Dpse\GA19891-PA | 278 | GA19891-PA | 99..263 | 350..512 | 153 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14791-PA | 681 | GM14791-PA | 1..681 | 1..681 | 3438 | 96 | Plus |
Dsec\GM16354-PA | 934 | GM16354-PA | 770..933 | 350..514 | 323 | 41.8 | Plus |
Dsec\GM19170-PA | 745 | GM19170-PA | 578..729 | 356..506 | 262 | 39.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13963-PA | 681 | GD13963-PA | 1..681 | 1..681 | 3430 | 95.9 | Plus |
Dsim\GD21350-PA | 931 | GD21350-PA | 772..930 | 350..514 | 261 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13378-PA | 689 | GJ13378-PA | 1..674 | 1..675 | 2398 | 69.8 | Plus |
Dvir\GJ10473-PA | 971 | GJ10473-PA | 804..970 | 345..514 | 325 | 41.8 | Plus |
Dvir\GJ19056-PA | 879 | GJ19056-PA | 688..879 | 337..518 | 272 | 37.6 | Plus |
Dvir\GJ13749-PA | 275 | GJ13749-PA | 102..263 | 353..512 | 152 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12547-PA | 693 | GK12547-PA | 1..692 | 1..677 | 2530 | 72.6 | Plus |
Dwil\GK11769-PA | 995 | GK11769-PA | 831..994 | 350..514 | 331 | 43.6 | Plus |
Dwil\GK20067-PA | 798 | GK20067-PA | 631..781 | 356..506 | 256 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21570-PA | 677 | GE21570-PA | 1..675 | 1..675 | 3238 | 91.4 | Plus |
Dyak\GE23757-PA | 993 | GE23757-PA | 829..992 | 350..514 | 337 | 43.6 | Plus |
Dyak\GE16711-PA | 764 | GE16711-PA | 597..748 | 356..506 | 270 | 40.3 | Plus |
Translation from 100 to 2145
> LD29573.hyp MKEHMSTKQHERNEKKKKKLAALANLMELNDRDRLHEAELAKKRDAEVEV EEKSTAKAEDGDDGFIVVGSKRKPRNRRQNNELEADSQTAPGTSDPEEPV NKKIRNYDAGGDSLPLEIGSLSEDQYNQLSAELRRRKRELENVPALRLRE MGQRASLETPQDARTPIFLTDIQNLLMCALIGQKSPCRPDRWCSVEKWLS LSHSVVVILEGLSLYHYLSNETQFEATNRIFSTKLEMILPPQEEGQKIID EIAKIPLTNAQARRLIDEHGSLESAVELNKDPTLFVKTIFPIESSKSESD DMHEDDKFPRTKLLLSALQMVDEGYPIPLQGELHTRFQNFKFTKDLYAPV TNRSPMFGVDCEMCHTEAGCNELTRISIVNENYETVYETLVLPNNRITDY LTQYSGITAEIMEQVTKRLDVVQKEVSELLPPDAILVGQSLNSDLNAMKM MHPYVIDTSVCFNTSGVRRRKTKLKDLAKTFLQEIIQENIDGHDSIEDSR ATLKLVKKKLANSIEFGDQILTQHKQLQELANASSGDTISNNLFAHVAKR DKRTAIVTVGELQPRLKEVIEKAGEAAPKDQSTSVHVHEVSTAKEAIRKV NEVALENALTIANLRVPEQDFILDSAQRSVAKLDKTIDRLWKSVAHNGLF LVIMGGSTECSKGVAKIAIKRLNGSNQTMES*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8368-PA | 681 | CG8368-PA | 1..681 | 1..681 | 3453 | 100 | Plus |
CG8368-PB | 681 | CG8368-PB | 1..681 | 1..681 | 3453 | 100 | Plus |
CG12877-PC | 991 | CG12877-PC | 827..990 | 350..514 | 319 | 41.8 | Plus |
CG42666-PK | 742 | CG42666-PK | 575..726 | 356..506 | 250 | 38.6 | Plus |
CG42666-PI | 742 | CG42666-PI | 575..726 | 356..506 | 250 | 38.6 | Plus |