![]() | BDGP Sequence Production Resources |
Search the DGRC for LD29590
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 295 |
Well: | 90 |
Vector: | pOT2 |
Associated Gene/Transcript | P32-RA |
Protein status: | LD29590.pep: gold |
Preliminary Size: | 1355 |
Sequenced Size: | 1141 |
Gene | Date | Evidence |
---|---|---|
CG6459 | 2001-01-01 | Release 2 assignment |
CG6459 | 2002-03-19 | Blastp of sequenced clone |
CG6459 | 2003-01-01 | Sim4 clustering to Release 3 |
CG6459 | 2008-04-29 | Release 5.5 accounting |
CG6459 | 2008-08-15 | Release 5.9 accounting |
CG6459 | 2008-12-18 | 5.12 accounting |
1141 bp (1141 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094810
> LD29590.complete TTGCACATTTCAGTGTTTAATTAAAGTAAAAAGCCCAGGTCGCGGTTATA TAACAAAATGAACAGCCTAAGGACAGCAACCATGCGATTTGCCGCTCTGG CCAGCTCCAGTGCCGGATCTCTCGGCAAGCGCGATTTCACCCGCAGCCTG TGGCACATGACCAAAAAGCCGGTGACAGCCGGAGGATCCGATCATGTAAC CGTGTTGAATCTCCACAAGCCCAGCATTAATTGCACGTGCGGCTGCAACG TGCACACCAAATGTGAGCGGGAACTGGTGGAGTTCCTCACCGAGGAGATA GTGGCCGAGCGCAAGGTTCAAAAGGGCAAGACGGTGCCAAGCACCCTGGA TGGATTCGCCGTAAAACTGACCGGCGCCGATGTGGAGCTCACCAAGCAGA CGGATAAGGAAAAGGTGGTGGTCAGCTTCAATGTGAACCATACGGTGGAC AGCGAGGAGGAGCCCGAAATCAACCCCAATGCTGACAAGCCGGATCTCGG TGAAATGAGAAGCAAGCCCCAGTTCGAGGTGGACATCATAAAGGGCAACT CTACGCTGTCCTTTACCTGCAGCTTCCTTCAAGGCGAAGCTCAGGAGGGC GAGTACAACGATGTCTTCTCCATTGATGAAATGGCCATCTTCGAGGGCGA GTGGAACGATAAGGTCTACGCCGTCGCAGGCGACGTGCTTGACGGTTACT TGTACGACTTGCTGATCAACTTGCTGGAGGAGAAGGGCATCAGTCAGGAG TTTGCCGAAAAACTGTCGGACCTAGCCACTGCCCATGAGCACACTTCCTA CATTGGTCTGCTGGAAAAGCTCTCCAAATTCACTGCCGGTGGCAAGTGAA TGTTCGTCCCACTTAATCTTAAAGCATAAAGTTGTGTAGGTTTTTAAGTT TCTATTGTCTGCTGTCGCAGTTTCATCACCTAAAACAGTTTTTATTAGTT GTGTTTTTGGTTTAACTGTGACAGTGAAACTTAGTTTTTAAGCCATAAAA CATTCATACATGTTTCAGATAAAACTATAGAAACGGTTGCCAATAATTCA CCCTTTTCGGCATCAGCTTCGCTTTGGTTTTTAACAAATACAACGTTAAT TCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 13558389..13558886 | 1105..608 | 2460 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 13558945..13559289 | 607..263 | 1665 | 98.8 | Minus |
chr2R | 21145070 | chr2R | 13559408..13559671 | 264..1 | 1290 | 99.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 17671308..17671806 | 1106..608 | 2495 | 100 | Minus |
2R | 25286936 | 2R | 17671865..17672209 | 607..263 | 1725 | 100 | Minus |
2R | 25286936 | 2R | 17672328..17672591 | 264..1 | 1320 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 17672507..17673005 | 1106..608 | 2495 | 100 | Minus |
2R | 25260384 | 2R | 17673064..17673408 | 607..263 | 1725 | 100 | Minus |
2R | 25260384 | 2R | 17673527..17673790 | 264..1 | 1320 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 13558389..13558886 | 608..1105 | 99 | <- | Minus |
chr2R | 13558945..13559289 | 263..607 | 98 | <- | Minus |
chr2R | 13559410..13559671 | 1..262 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6459-RA | 1..792 | 58..849 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P32-RA | 1..792 | 58..849 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6459-RA | 1..792 | 58..849 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P32-RA | 1..792 | 58..849 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6459-RA | 45..1147 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6459-RA | 53..1157 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P32-RA | 50..1154 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG6459-RA | 45..1147 | 1..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
P32-RA | 50..1154 | 1..1105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17671309..17671806 | 608..1105 | 100 | <- | Minus |
2R | 17671865..17672209 | 263..607 | 100 | <- | Minus |
2R | 17672330..17672591 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17671309..17671806 | 608..1105 | 100 | <- | Minus |
2R | 17671865..17672209 | 263..607 | 100 | <- | Minus |
2R | 17672330..17672591 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17671309..17671806 | 608..1105 | 100 | <- | Minus |
2R | 17671865..17672209 | 263..607 | 100 | <- | Minus |
2R | 17672330..17672591 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 13558814..13559311 | 608..1105 | 100 | <- | Minus |
arm_2R | 13559370..13559714 | 263..607 | 100 | <- | Minus |
arm_2R | 13559835..13560096 | 1..262 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 17672508..17673005 | 608..1105 | 100 | <- | Minus |
2R | 17673064..17673408 | 263..607 | 100 | <- | Minus |
2R | 17673529..17673790 | 1..262 | 100 | Minus |
Translation from 57 to 848
> LD29590.pep MNSLRTATMRFAALASSSAGSLGKRDFTRSLWHMTKKPVTAGGSDHVTVL NLHKPSINCTCGCNVHTKCERELVEFLTEEIVAERKVQKGKTVPSTLDGF AVKLTGADVELTKQTDKEKVVVSFNVNHTVDSEEEPEINPNADKPDLGEM RSKPQFEVDIIKGNSTLSFTCSFLQGEAQEGEYNDVFSIDEMAIFEGEWN DKVYAVAGDVLDGYLYDLLINLLEEKGISQEFAEKLSDLATAHEHTSYIG LLEKLSKFTAGGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13236-PA | 262 | GF13236-PA | 1..262 | 1..263 | 1297 | 90.9 | Plus |
Dana\GF19086-PA | 310 | GF19086-PA | 55..297 | 24..261 | 384 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21031-PA | 263 | GG21031-PA | 1..263 | 1..263 | 1317 | 94.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21807-PA | 261 | GH21807-PA | 1..259 | 1..260 | 1224 | 85.8 | Plus |
Dgri\GH12794-PA | 271 | GH12794-PA | 59..259 | 67..261 | 356 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
P32-PA | 263 | CG6459-PA | 1..263 | 1..263 | 1358 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20778-PA | 260 | GI20778-PA | 1..259 | 1..261 | 1266 | 89.3 | Plus |
Dmoj\GI15239-PA | 267 | GI15239-PA | 61..257 | 67..261 | 360 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17681-PA | 263 | GL17681-PA | 1..263 | 1..263 | 1152 | 85.6 | Plus |
Dper\GL24768-PA | 268 | GL24768-PA | 62..252 | 67..260 | 247 | 33.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19611-PA | 263 | GA19611-PA | 1..263 | 1..263 | 1152 | 85.6 | Plus |
Dpse\GA28905-PA | 266 | GA28905-PA | 21..250 | 16..260 | 260 | 31 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19961-PA | 263 | GM19961-PA | 1..263 | 1..263 | 1395 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25453-PA | 328 | GD25453-PA | 119..328 | 54..263 | 1093 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20513-PA | 263 | GJ20513-PA | 1..262 | 1..261 | 1255 | 88.2 | Plus |
Dvir\GJ18841-PA | 254 | GJ18841-PA | 48..244 | 67..261 | 360 | 38.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15662-PA | 262 | GK15662-PA | 1..262 | 1..263 | 1233 | 84.8 | Plus |
Dwil\GK19758-PA | 244 | GK19758-PA | 61..229 | 97..258 | 154 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13974-PA | 263 | GE13974-PA | 1..263 | 1..263 | 1393 | 99.2 | Plus |
Translation from 57 to 848
> LD29590.hyp MNSLRTATMRFAALASSSAGSLGKRDFTRSLWHMTKKPVTAGGSDHVTVL NLHKPSINCTCGCNVHTKCERELVEFLTEEIVAERKVQKGKTVPSTLDGF AVKLTGADVELTKQTDKEKVVVSFNVNHTVDSEEEPEINPNADKPDLGEM RSKPQFEVDIIKGNSTLSFTCSFLQGEAQEGEYNDVFSIDEMAIFEGEWN DKVYAVAGDVLDGYLYDLLINLLEEKGISQEFAEKLSDLATAHEHTSYIG LLEKLSKFTAGGK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
P32-PA | 263 | CG6459-PA | 1..263 | 1..263 | 1358 | 100 | Plus |