BDGP Sequence Production Resources |
Search the DGRC for LD29662
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 296 |
Well: | 62 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11261-RA |
Protein status: | LD29662.pep: gold |
Preliminary Size: | 2149 |
Sequenced Size: | 2210 |
Gene | Date | Evidence |
---|---|---|
CG11261 | 2001-01-01 | Release 2 assignment |
CG11261 | 2001-11-29 | Blastp of sequenced clone |
CG11261 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11261 | 2008-04-29 | Release 5.5 accounting |
CG11261 | 2008-08-15 | Release 5.9 accounting |
CG11261 | 2008-12-18 | 5.12 accounting |
2210 bp (2210 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069566
> LD29662.complete ATAAGATCGTACAACAGCGCAAACAATCGCGGTACGCTGATTGACTTCCC CTAGAAAACCAACTTCAAATTGCAACACTATCATTAACAATAATGAATCG GGTTAAAAGAATATCTAATTACTTTGACTCTATGCTACCCCTGATCGATA ATATTTTGCAAGTAGTGAATCAGATCTTCGATGATTACACTTCCTTTGAT GGCCAAAAGCTCATGCACTTATACCACCTCATTTACAAGCAGTGCGCGGC GGAGCGCAATTGGAATAATCCAGCCCAGAAGAACGGGAGAAGTCTTTACA TTGTGCTATCCGACTGCCTGATGAAGCGACTAAAAAACATAGCATGGGTA ATGGAGAACCAACTCGACGACAACAAACCAATTCGACTGATCGCCAAATA TTTAGAGCACTGGGTACCCTATCAAAGGTCATGTGAGAAACTGAACCTAG CTTGCTACCACTTCAACCGCAACTGGGTGGAACGGGAGCGGCTTAAGGGA GACAAAGAAACTTATCCGATATATCGCTTGGCCATGATTAGCTGGAAGGA GCTGGTCTTCGAGCCCAGCGTCACGATTCTCGCCGCCATTAGGCTGATTT TGAGTCAGATGCCCAGGGAATACAATAAATCATTGGAATACCAAGTATAC CAGGTGCTCCAATCCATTGTGGAACTGTACGCCAACGATAAGTACCAAGA TGTGTCCTTGCCTTCTAGGATAGACAAAATTTTCACTGAGAAGGTGATGG ATTTCTACAAGTCAACGACGTTGCACGAATTCCAAAAGATCGTCGTATCC AATGACTACAAGGATTTCAAGCATTTCCTTAGGTACGCATGCCTAGCCAT GCCAGAAATTGAGAATGGGACACAATTTAAGGCAATACTAAAAAGATACC TCGCTGCGAGGCTGCAGGAGACGAGGCTGTCAGGCAAGGATTATATCCAA GCCTTCTTGGGACTTTGTCGCGGTCCTTTGCAGCGAGCATTGCGGGACCA CACAAAATTGGCGGAAGTCGTGGATGCGGTGTGCAAAGAAGAAATTAATA GAAAGGGCCAGATAATTGACCCCACCCGTCTGCTTGTCACATATGCCAAC GAACTTATGACCAAAAGGCAGGAGTCCGAGGAAGCAATTATTGATGAACT TAAACGGATCGTTAAATGCGTGGAGTTTTTAAGCGATGAGTACAAATTTA TTGACATGTATTTGAAAGCACTTCGGATTCGACAAATCAATGAAACATCC ACCTCGGACGGCGTTGAGTCCATAATGTATTCCCTTCTGAATAAAAAAAT GGCAAACTTTGTAACTAGATGTATATATGTGCAGTTAAGAGATGTAGATA AGTTGAGAACCCTAAAAAAAGAGTTTCAAGATCACTTGAATAGCAAGGGG ATCAAGTTAGGATTCGATTTTCGTCCAAAATGCTTCAAAAATGATGGGAG TTTTGAGAATTTTAACCTCACGTTGCCCGACGAACTGCAGCAAGCTTGGA AGGAGTTTCGTATTTTTTACGAAGCAAGAAAATTACAAAGCAAGGCAATT ATACAACTTAATAACGAATTATCCTCTGGTGAGATAACCTGTCATTTGAA TCAGTCGGTCTATATTCTCGAGGTAAGCACTTTGCAAATGGCCGTTCTGA TGCTATTCAATCGGCATGAACGATTTACGGAGCAGGAATTGGTGACTGCT TTGGGAGTCGAGCTGGAGACCCTCCAAGAGGCATTAAAACAGATTAAGTT TCTGGTTTATATCGAAGTAAATAAAGTAAATTATATAGAAATAAACATGG ACTTTACAAACCGGAAACGCCGACTCTTCTGCAATGAGCCCCTGCCCAGA AAAATGAGAAAGATTGAAGAGAAAAGCGAAATTGAATTGAAAATACGGCG AGACAAGCAAGTGGATGCTGCAATAGTGCGCATTATGAAAGGTCAAAAGC AACTGGAATATTCGGAATTAATTTCACTCGTTTATGAGGAGCTTAAAGAT CGGGTAAAGCCACAAGTGAGTTTTATCAAGAAAAGACTTGACTACCTGGT GGAGCGTGAATATTTGGAACGTGATAATTATTATAATATTTACAGATATT TGTAGTATAGAAAATGAAGGTATACGATTTTAATAATTTGAAAAATATTT TGTATAATTAACAAAACGAAGCAAATAAACAATAACAATATAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Idefix | 7411 | Idefix DME9736 7411bp Derived from AJ009736 (e1371475) (Rel. 58, Last updated, Version 1). | 6314..6734 | 1774..2189 | 118 | 52.6 | Plus |
Transpac | 5249 | Transpac 5249bp Derived from AF222049 (AF222049.1) (Rel. 62, Last updated, Version 1). | 3083..3201 | 2191..2077 | 117 | 59.2 | Minus |
297 | 6995 | 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). | 621..723 | 2081..2185 | 115 | 58.1 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 12999693..13000153 | 1731..2191 | 92 | <- | Minus |
chr3L | 13000227..13001956 | 1..1730 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 1..2013 | 93..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 1..2013 | 93..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 1..2013 | 93..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 1..2013 | 93..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 1..2013 | 93..2105 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 21..2211 | 1..2191 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 21..2211 | 1..2191 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 25..2215 | 1..2191 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 21..2211 | 1..2191 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11261-RA | 25..2215 | 1..2191 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13009399..13009859 | 1731..2191 | 100 | <- | Minus |
3L | 13009932..13011661 | 1..1730 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13009399..13009859 | 1731..2191 | 100 | <- | Minus |
3L | 13009932..13011661 | 1..1730 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13009399..13009859 | 1731..2191 | 100 | <- | Minus |
3L | 13009932..13011661 | 1..1730 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 13002499..13002959 | 1731..2191 | 100 | <- | Minus |
arm_3L | 13003032..13004761 | 1..1730 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 13002499..13002959 | 1731..2191 | 100 | <- | Minus |
3L | 13003032..13004761 | 1..1730 | 100 | Minus |
Translation from 92 to 2104
> LD29662.pep MNRVKRISNYFDSMLPLIDNILQVVNQIFDDYTSFDGQKLMHLYHLIYKQ CAAERNWNNPAQKNGRSLYIVLSDCLMKRLKNIAWVMENQLDDNKPIRLI AKYLEHWVPYQRSCEKLNLACYHFNRNWVERERLKGDKETYPIYRLAMIS WKELVFEPSVTILAAIRLILSQMPREYNKSLEYQVYQVLQSIVELYANDK YQDVSLPSRIDKIFTEKVMDFYKSTTLHEFQKIVVSNDYKDFKHFLRYAC LAMPEIENGTQFKAILKRYLAARLQETRLSGKDYIQAFLGLCRGPLQRAL RDHTKLAEVVDAVCKEEINRKGQIIDPTRLLVTYANELMTKRQESEEAII DELKRIVKCVEFLSDEYKFIDMYLKALRIRQINETSTSDGVESIMYSLLN KKMANFVTRCIYVQLRDVDKLRTLKKEFQDHLNSKGIKLGFDFRPKCFKN DGSFENFNLTLPDELQQAWKEFRIFYEARKLQSKAIIQLNNELSSGEITC HLNQSVYILEVSTLQMAVLMLFNRHERFTEQELVTALGVELETLQEALKQ IKFLVYIEVNKVNYIEINMDFTNRKRRLFCNEPLPRKMRKIEEKSEIELK IRRDKQVDAAIVRIMKGQKQLEYSELISLVYEELKDRVKPQVSFIKKRLD YLVEREYLERDNYYNIYRYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25176-PA | 344 | GF25176-PA | 1..337 | 1..352 | 530 | 35.9 | Plus |
Dana\GF13641-PA | 775 | GF13641-PA | 283..774 | 203..670 | 377 | 27.5 | Plus |
Dana\GF15487-PA | 748 | GF15487-PA | 375..747 | 309..670 | 263 | 25.5 | Plus |
Dana\GF14531-PA | 874 | GF14531-PA | 505..873 | 345..670 | 208 | 27.2 | Plus |
Dana\GF11213-PA | 821 | GF11213-PA | 466..820 | 327..670 | 187 | 25.3 | Plus |
Dana\GF13641-PA | 775 | GF13641-PA | 27..211 | 25..204 | 163 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13790-PA | 664 | GG13790-PA | 1..646 | 1..653 | 1605 | 50.8 | Plus |
Dere\GG23311-PA | 858 | GG23311-PA | 369..857 | 205..670 | 378 | 28 | Plus |
Dere\GG21342-PA | 753 | GG21342-PA | 380..752 | 309..670 | 267 | 25.8 | Plus |
Dere\GG24216-PA | 1027 | GG24216-PA | 658..1026 | 345..670 | 210 | 27.2 | Plus |
Dere\GG10678-PA | 821 | GG10678-PA | 466..820 | 327..670 | 180 | 24.7 | Plus |
Dere\GG23311-PA | 858 | GG23311-PA | 85..295 | 1..204 | 162 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21298-PA | 773 | GH21298-PA | 277..772 | 196..670 | 375 | 28.1 | Plus |
Dgri\GH10784-PA | 756 | GH10784-PA | 383..755 | 309..670 | 265 | 25.8 | Plus |
Dgri\GH13125-PA | 990 | GH13125-PA | 619..978 | 345..660 | 191 | 26.9 | Plus |
Dgri\GH19988-PA | 826 | GH19988-PA | 471..825 | 327..670 | 178 | 25 | Plus |
Dgri\GH21298-PA | 773 | GH21298-PA | 1..212 | 4..205 | 162 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11261-PA | 670 | CG11261-PA | 1..670 | 1..670 | 3454 | 100 | Plus |
Cul1-PD | 774 | CG1877-PD | 11..773 | 5..670 | 501 | 25.7 | Plus |
Cul1-PA | 774 | CG1877-PA | 11..773 | 5..670 | 501 | 25.7 | Plus |
Cul1-PB | 774 | CG1877-PB | 11..773 | 5..670 | 501 | 25.7 | Plus |
Cul1-PC | 774 | CG1877-PC | 11..773 | 5..670 | 501 | 25.7 | Plus |
Cul2-PB | 753 | CG1512-PB | 381..752 | 310..670 | 295 | 25.9 | Plus |
Cul2-PA | 753 | CG1512-PA | 381..752 | 310..670 | 295 | 25.9 | Plus |
Cul3-PE | 773 | CG11861-PB | 404..772 | 345..670 | 238 | 27.3 | Plus |
Cul3-PC | 773 | CG11861-PA | 404..772 | 345..670 | 238 | 27.3 | Plus |
Cul3-PD | 773 | CG11861-PC | 404..772 | 345..670 | 238 | 27.3 | Plus |
Cul3-PF | 934 | CG42615-PF | 565..933 | 345..670 | 238 | 27.3 | Plus |
Cul4-PB | 821 | CG8711-PB | 466..820 | 327..670 | 207 | 24 | Plus |
Cul4-PA | 821 | CG8711-PA | 466..820 | 327..670 | 207 | 24 | Plus |
Cul5-PA | 852 | CG1401-PA | 484..842 | 330..662 | 171 | 24.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19786-PA | 827 | GI19786-PA | 331..826 | 196..670 | 359 | 26.9 | Plus |
Dmoj\GI17442-PA | 757 | GI17442-PA | 384..756 | 309..670 | 263 | 26.1 | Plus |
Dmoj\GI22726-PA | 1023 | GI22726-PA | 654..1011 | 345..660 | 198 | 26.3 | Plus |
Dmoj\GI20275-PA | 822 | GI20275-PA | 467..821 | 327..670 | 189 | 25.3 | Plus |
Dmoj\GI19786-PA | 827 | GI19786-PA | 81..264 | 25..203 | 171 | 31.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11695-PA | 774 | GL11695-PA | 284..773 | 205..670 | 389 | 27.6 | Plus |
Dper\GL25796-PA | 756 | GL25796-PA | 383..755 | 309..670 | 262 | 25.5 | Plus |
Dper\GL17383-PA | 816 | GL17383-PA | 461..815 | 327..670 | 191 | 25 | Plus |
Dper\GL26600-PA | 1008 | GL26600-PA | 639..996 | 345..660 | 189 | 25.6 | Plus |
Dper\GL11695-PA | 774 | GL11695-PA | 26..211 | 25..205 | 155 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10874-PA | 675 | GA10874-PA | 1..662 | 1..659 | 584 | 29.9 | Plus |
Dpse\GA15074-PB | 774 | GA15074-PB | 284..773 | 205..670 | 389 | 27.6 | Plus |
Dpse\GA13508-PA | 756 | GA13508-PA | 383..755 | 309..670 | 262 | 25.5 | Plus |
Dpse\GA21273-PA | 816 | GA21273-PA | 461..815 | 327..670 | 191 | 25 | Plus |
Dpse\GA16511-PA | 1008 | GA16511-PA | 639..996 | 345..660 | 188 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24616-PA | 459 | GM24616-PA | 1..312 | 1..314 | 1263 | 74.4 | Plus |
Dsec\GM24616-PA | 459 | GM24616-PA | 310..459 | 515..670 | 542 | 75.8 | Plus |
Dsec\GM20989-PA | 774 | GM20989-PA | 285..773 | 205..670 | 378 | 27.9 | Plus |
Dsec\GM16141-PA | 753 | GM16141-PA | 380..752 | 309..670 | 267 | 25.8 | Plus |
Dsec\GM14478-PA | 1028 | GM14478-PA | 659..1027 | 345..670 | 217 | 27.8 | Plus |
Dsec\GM20989-PA | 774 | GM20989-PA | 1..211 | 1..204 | 165 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12683-PA | 660 | GD12683-PA | 1..660 | 1..670 | 2613 | 75.6 | Plus |
Dsim\GD10516-PA | 774 | GD10516-PA | 285..773 | 205..670 | 378 | 27.9 | Plus |
Dsim\GD24329-PA | 753 | GD24329-PA | 380..752 | 309..670 | 267 | 25.8 | Plus |
Dsim\GD21965-PA | 1003 | GD21965-PA | 634..1002 | 345..670 | 217 | 28 | Plus |
Dsim\GD10516-PA | 774 | GD10516-PA | 1..211 | 1..204 | 165 | 29.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17750-PA | 773 | GJ17750-PA | 277..772 | 196..670 | 377 | 28.1 | Plus |
Dvir\GJ14230-PA | 756 | GJ14230-PA | 383..755 | 309..670 | 259 | 25.5 | Plus |
Dvir\GJ23288-PA | 985 | GJ23288-PA | 616..973 | 345..660 | 202 | 27.3 | Plus |
Dvir\GJ20228-PA | 821 | GJ20228-PA | 466..820 | 327..670 | 189 | 25.3 | Plus |
Dvir\GJ17750-PA | 773 | GJ17750-PA | 1..212 | 1..205 | 166 | 29.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21971-PA | 775 | GK21971-PA | 1..774 | 1..670 | 469 | 26.7 | Plus |
Dwil\GK23161-PA | 821 | GK23161-PA | 466..820 | 327..670 | 194 | 25.8 | Plus |
Dwil\GK18258-PA | 775 | GK18258-PA | 404..774 | 345..670 | 191 | 27 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20083-PA | 665 | GE20083-PA | 1..665 | 1..670 | 1657 | 52.1 | Plus |
Dyak\GE19156-PA | 774 | GE19156-PA | 285..773 | 205..670 | 379 | 28 | Plus |
Dyak\GE12924-PA | 753 | GE12924-PA | 380..752 | 309..670 | 268 | 25.8 | Plus |
Dyak\GE19410-PA | 1027 | GE19410-PA | 658..1026 | 345..670 | 210 | 27.2 | Plus |
Dyak\GE23323-PA | 821 | GE23323-PA | 466..820 | 327..670 | 182 | 24.7 | Plus |
Dyak\GE19156-PA | 774 | GE19156-PA | 1..211 | 1..204 | 164 | 29.1 | Plus |
Translation from 92 to 2104
> LD29662.hyp MNRVKRISNYFDSMLPLIDNILQVVNQIFDDYTSFDGQKLMHLYHLIYKQ CAAERNWNNPAQKNGRSLYIVLSDCLMKRLKNIAWVMENQLDDNKPIRLI AKYLEHWVPYQRSCEKLNLACYHFNRNWVERERLKGDKETYPIYRLAMIS WKELVFEPSVTILAAIRLILSQMPREYNKSLEYQVYQVLQSIVELYANDK YQDVSLPSRIDKIFTEKVMDFYKSTTLHEFQKIVVSNDYKDFKHFLRYAC LAMPEIENGTQFKAILKRYLAARLQETRLSGKDYIQAFLGLCRGPLQRAL RDHTKLAEVVDAVCKEEINRKGQIIDPTRLLVTYANELMTKRQESEEAII DELKRIVKCVEFLSDEYKFIDMYLKALRIRQINETSTSDGVESIMYSLLN KKMANFVTRCIYVQLRDVDKLRTLKKEFQDHLNSKGIKLGFDFRPKCFKN DGSFENFNLTLPDELQQAWKEFRIFYEARKLQSKAIIQLNNELSSGEITC HLNQSVYILEVSTLQMAVLMLFNRHERFTEQELVTALGVELETLQEALKQ IKFLVYIEVNKVNYIEINMDFTNRKRRLFCNEPLPRKMRKIEEKSEIELK IRRDKQVDAAIVRIMKGQKQLEYSELISLVYEELKDRVKPQVSFIKKRLD YLVEREYLERDNYYNIYRYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11261-PA | 670 | CG11261-PA | 1..670 | 1..670 | 3454 | 100 | Plus |
Cul1-PD | 774 | CG1877-PD | 11..773 | 5..670 | 501 | 25.7 | Plus |
Cul1-PA | 774 | CG1877-PA | 11..773 | 5..670 | 501 | 25.7 | Plus |
Cul1-PB | 774 | CG1877-PB | 11..773 | 5..670 | 501 | 25.7 | Plus |
Cul1-PC | 774 | CG1877-PC | 11..773 | 5..670 | 501 | 25.7 | Plus |