Clone LD29768 Report

Search the DGRC for LD29768

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:297
Well:68
Vector:pOT2
Associated Gene/TranscriptHcf-RA
Protein status:LD29768.pep: gold
Sequenced Size:5326

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1710 2004-07-14 Blastp of sequenced clone
Hcf 2008-04-29 Release 5.5 accounting
Hcf 2008-08-15 Release 5.9 accounting
Hcf 2008-12-18 5.12 accounting

Clone Sequence Records

LD29768.complete Sequence

5326 bp (5326 high quality bases) assembled on 2005-08-22

GenBank Submission: BT015268

> LD29768.complete
TGAGGTCTCAGTTCGGCTTTTAATTTTGATAATTCTTAATAGTGTTTGTC
TTTTTGAACATTAAAAGTGAAAATTGTCGTATAGCATTTAAATATGAACT
TCATATAAAATATCTCTCAAATATCAATTATTTTCCAAGATTTGATTGGC
TGATTTGTTAAAGTTTTTGCGCGTAGACCTAATCCATTATAGGGAAGCGT
CTAGTTCCAGCATTGCCAGGCCAAAATAAATTGTGCATTACATAGAGAAT
GCCTTTGGGTTTTTAGTATTTTACAATTAAAGGAAACACATAAGCACAAA
GCCATTCGATGGACTACGCACCGTGAAAGGAAATGCAAACCTAATTTGTA
GCTGTCTACAATAATCAAGTTATATATATATATTATCAAAACAATAAATT
GCTGGCCATAATATGGAAGGCTCAGACTTTGTGGATCCAGCCTTTTCTTC
AGGAGAACGAATATCGGCATCTGATCTCAATTCGGAGCATATTATTCAGG
CCGAGAATCACAGTTTTGCTAATCGAATTTCTATGGATATGGATGTCCCT
GATGGGCACCAGCTGGACAGCAACTTAACCGGATTTCGATGGAAGCGAGT
TCTTAACCCAACCGGACCGCAGCCCCGCCCGAGACATGGACACCGTGCGA
TAAACATCAAAGAGCTAATGGTCGTCTTCGGCGGCGGAAACGAAGGAATT
GTTGACGAGTTGCACGTTTATAATACTGTTACTAATCAGTGGTACGTCCC
AGTGCTAAAAGGTGATGTACCGAACGGATGCGCTGCTTATGGATTTGTTG
TGGAGGGTACTCGCATGTTTGTTTTTGGGGGAATGATCGAATACGGAAAA
TATTCAAACGAGCTCTATGAGCTACAGGCAACTAAATGGGAATGGAGAAA
AATGTATCCAGAGTCACCAGACAGTGGGTTGTCACCGTGTCCTCGCTTGG
GTCACAGCTTTACAATGGTTGGTGAAAAAATATTTCTTTTCGGCGGACTA
GCAAATGAATCGGACGACCCAAAAAATAATATTCCAAAATACTTAAACGA
CTTGTACATACTGGATACTCGAGGAGTTCACAGTCATAACGGAAAGTGGA
TAGTACCTAAAACATATGGGGATAGCCCGCCACCACGAGAGTCGCACACA
GGCATATCGTTTGCTACTAAAAGCAACGGAAATTTAAATCTTTTGATTTA
TGGTGGAATGAGCGGCTGCCGCTTGGGAGATTTATGGTTGCTAGAAACAG
ACTCCATGACTTGGTCGAAGCCGAAAACTTCAGGGGAGGCGCCGCTACCA
CGCTCGTTGCACAGTTCTACAATGATTGGCAACAAAATGTATGTCTTTGG
TGGCTGGGTTCCCTTAGTGATCAATGATTCTAAATCGACAACAGAGCGTG
AATGGAAATGTACAAACACTCTTGCTGTCCTTGACCTTGAAACAATGACA
TGGGAAAATGTCACATTGGACACTGTAGAGGAAAATGTTCCACGTGCCCG
TGCTGGCCACTGTGCAGTTGGTATTCAAAGTCGTCTTTATGTGTGGTCAG
GTCGTGATGGTTACCGCAAAGCATGGAACAACCAGGTTTGCTGCAAAGAC
CTGTGGTACTTAGAGGTCTCCAAGCCCCTGTATGCAGTAAAAGTTGCGCT
AGTTCGCGCTTCTACTCACGCCTTGGAGCTCTCGTGGACTGCGACCACTT
TTGCAGCAGCCTACGTTTTGCAAATCCAAAAAATTGAGCAGCCATTAAAT
ACAAGCTCGAAACTGTTAAGCAACAACATTGTTCAACAAGGAACCCCGAC
ATCTGCTGAAACTTCTGGAATTAATATTTCAGCAAATAGATCTGGGAGTG
CTTTGGGTCTTGGTGTCGAAGCCACATCTACAGTCTTAAAACTAGAAAAG
GAATCTTTGCAACTGAGTGGATGTCAACCGGAAACAAATGTTCAACCATC
TGTAAATGACTTGTTGCAATCAATGTCGCAACCTTCTTCCCCAGCGTCCC
GTGCTGATAAAGACCCACTTTCGTCAGGGGGTGGAACTACCTTTAACTTA
TCAACATCGGTCGCTTCAGTGCATCCTCAAATATCTGTAATCAGTAGTAC
AGCCGCAGTAACGGGCAACGACACAGCGTCCCCAAGTGGCGCCATTAATA
GTATATTGCAAAAGTTTCGACCAGTTGTTACCGCTGTAAGAACGTCCACA
ACTACTGCGGTATCTATTGCTACCAGCACGTCTGATCCCTTGTCTGTGCG
AGTACCAAGTACGATGTCGGCAAACGTTGTTCTCAGCTCTTCAAGTAGTA
CATTGCGTATTGTCCCAAGCGTAACTGCATCGCATTCACTACGTATAGCT
TCTTCTCAAGCAAGTGGCAACAACTGCCGGAGTAGCTCTGCAATAAATAT
ATTAAAAACAGCTCTTCCAAACGTCGCCGTGCAATCTCAGCCTACATCAT
CGACCACCACCTCCATTGGTGGAAAACAGTACTTCATTCAAAAGCCACTT
ACACTTGCTCCAAATGTTCAGCTCCAATTTGTTAAGACCAGTGGTGGGAT
GACTGTTCAAACTCTTCCAAAAGTAAACTTTACGGCTTCAAAAGGAACGC
CCCCACATGGCATATCAATTGCAAACCCACATTTGGCGTCTGGTATTACT
CAAATTCAGGGATCGACAGTGCCTGGAAGTCAGATTCAAAAGCCCATTGT
GTCCGGAAACGTTTTAAAGCTTGTATCGCCGCATACGATGGCCGGTGGAA
AATTGATTATGAAGAATTCAAACATCTTACAGATGGGCAAGGTAACTCCG
AACGTAATGGGTGGAAAACCAGCTTTTGTCATAACTAATAAACAGGGTAC
GCCATTGGGAAATCAGCAGATTATTATTGTAACCACTGGTGGCAATGTGC
GATCTGTTCCAACTAGCACAGTTATGACAAGTGCTGGTGGCTCTGCATCA
GGGACAAATATTGTAAGTATAGTTAACTCAACGTCGACCACGCCTAGCCC
GCTGCAGGCATTAAGTGGACAAAAAACTTTAATATCCAACCAAAGTGGAG
TTAAGATGCTGCGAAATATATCATCAGTACAAGCATCATCTTCAATGGCA
TTTGGGCAAAAACAAAGTGGCACTCCCATTCATCAAAAAACGGCATTGTA
TATAGGAGGCAAAGCTGTTACCGTTATGAGCACCAATACAAGTATGGCTG
CATCCGGAAATAAAGTTATGGTACTACCAGGAACAAGCTCAAATAATTCT
CCTGCTACTACAACGGCGCTGAGTGCCAGAAAAAGTTTTGTTTTCAATGC
CGGAGGTAGCCCTCGGACCGTCACTTTAGCAACTAAAAGCATTAATGCAA
AATCTATACCACAATCGCAACCAGTGACGGAAACTAATAACCATTCAGTC
GCTACTATTAAAGACACAGATCCAATGGATGATATTATAGAGCAGTTGGA
TGGAGCCGGAGATCTGCTAAAGCTTTCTGAAAGTGAAGGCCAGCATGGAT
CGGAGGAGAATGAAAATAATGGTGAAAACGCAACGTCTTCATCTGCCTCT
GCCCTGTTTACCGGAGGTGATACGGCCGGGCCATCGAGAGCCCAAAACCC
TATAGTAATGGAACATCCGGTTGATATTATAGAAGATGTCTCTGGCGTGA
GCAGCACAACTGACGTTAACGAAACTGCAATCGTAAGTGGTGATACAATA
GAATCGCTTAAGATGTCGGAGAAGGAAAACGATGATGTGAAATCTATGGG
TGAAAAATCAATATTATCCGATGATTGTCATCAGCCGACGACTTCCGAGA
CGGAAGCGGCCACCATCCTAACCACAATTAAGTCTGCAGAGGCTTTAGTG
TTGGAAACTGCAGAAATAAGGAAAGATCATACCGGATGTACTATAGGTAG
TTTGAAAGAAAATCAAGATGAAAATAAAAAGTTTAAACAACGGCAAGAAT
CTTCACCGTCTCAAAACATTCACCAATTCCAAAATGTGGATGGTTCACAA
TTAGAGGCTCTTGCTTCTGCTGCGTTACTGCAAGCTGCAACATCAGACAC
CACAGCATTGGCGTTGAAAGAATTGATAGAGCGACCGGAAAGTGAAACAA
ATACCAGAAGTAGCAACATTGCTGAGATTCAACAAAATAATGTTCAATCC
ACCTTAGCGGTCGTGGTTCCAAACACCTCCCAAAACGAGAACCAAAAATG
GCACACAGTAGGTGTGTTTAAGGATCTTTCTCACACAGTGACTAGCTACA
TTGATTCGAATTGTATTAGTGATTCTTTTTTTGACGGTATAGATGTGGAT
AATCTTCCAGATTTCAGCAAGTTTCCACGCACCAATTTGGAGCCTGGAAC
GGCTTACCGTTTTCGACTGAGTGCTATCAATTCTTGCGGACGAGGAGAAT
GGGGAGAGATATCAAGTTTTAAAACCTGTTTACCAGGCTTTCCGGGTGCC
CCCTCAGCTATTAAAATTTCCAAGGATGTCAAGGAGGGCGCTCACTTAAC
ATGGGAACCACCACCAGCTCAAAAAACTAAGGAGATAATTGAATATTCAG
TATACCTTGCAGTTAAGCCTACTGCCAAGGATAAGGCGTTGTCCACTCCA
CAATTAGCTTTTGTGCGGGTTTATGTAGGTGCGGCAAATCAATGCACAGT
GCCGAATGCTTCACTATCTAATGCACATGTGGATTGCTCAAATAAACCAG
CAATTATATTCCGAATCGCTGCTCGCAATCAAAAGGGCTATGGACCTGCC
ACCCAAGTTAGATGGCTGCAGGATCCCGCGGCAGCGAAACAGCACACACC
CACAGTTACGCCAAATCTAAAACGTGGACCAGAAAAATCAACTATTGGAA
GCAGCAACATAGCAAACACCTTCTGTTCACCACACAAGCGTGGACGCAAC
GGATTGCATGATTGACATACCGATTAGTAGCATAATCACTCATATATAGG
CATATAAATTATGGGTTAAATGTAAAGTATGCTATTAGCTTTTCCGTTTT
TACAGCTTCCAATAGACTTTACGCTGAATTCAAAATGATTACAACGAAAC
TTGAATATTATTGCTATTAATGCAGTTTTCTAAGAGACTGCTAATTGTGT
ATGATGCATGTAACATTAATCCAGTTTGGTTTGCTTTAATGACGAAAATA
ATAAATTGACGTCGACAATTTTAAGTAAACATAATAACATAACAAACATA
ATAATATATAATATTTTCCTTATCATGAACTCTACAACACTCTAGTGTAT
ATGTATGCTAATCTTCGGTAAAATAAAAGTTAATTTAAAAAATGTAAAAT
TATTTACAAAAAAAAAAAAAAAAAAA

LD29768.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:50:04
Subject Length Description Subject Range Query Range Score Percent Strand
Hcf-RA 7529 Hcf-RA 23..5331 1..5309 26545 100 Plus
Hcf-RB 7225 Hcf-RB 26..5027 308..5309 25010 100 Plus
Hcf-RD 7264 Hcf-RD 66..5066 309..5309 25005 100 Plus
Hcf-RD 7264 Hcf-RD 23..65 1..43 215 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr4 1351717 chr4 386245..387337 2657..3749 5465 100 Plus
chr4 1351717 chr4 384440..385517 1583..2660 5390 100 Plus
chr4 1351717 chr4 392823..393358 4772..5307 2665 99.8 Plus
chr4 1351717 chr4 381161..381581 308..728 2105 100 Plus
chr4 1351717 chr4 392385..392750 4407..4772 1830 100 Plus
chr4 1351717 chr4 382878..383188 728..1038 1555 100 Plus
chr4 1351717 chr4 380552..380859 1..308 1540 100 Plus
chr4 1351717 chr4 391665..391931 4142..4408 1335 100 Plus
chr4 1351717 chr4 390080..390318 3748..3986 1195 100 Plus
chr4 1351717 chr4 383246..383457 1039..1250 1060 100 Plus
chr4 1351717 chr4 383519..383709 1249..1439 955 100 Plus
chr4 1351717 chr4 390383..390540 3986..4143 790 100 Plus
chr4 1351717 chr4 384068..384217 1439..1588 750 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:23:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
4 1348131 4 365671..366763 2657..3749 5465 100 Plus
4 1348131 4 363865..364942 1583..2660 5390 100 Plus
4 1348131 4 372249..372786 4772..5309 2690 100 Plus
4 1348131 4 360586..361006 308..728 2105 100 Plus
4 1348131 4 371811..372176 4407..4772 1830 100 Plus
4 1348131 4 362303..362613 728..1038 1555 100 Plus
4 1348131 4 359977..360284 1..308 1540 100 Plus
4 1348131 4 371091..371357 4142..4408 1335 100 Plus
4 1348131 4 369506..369744 3748..3986 1195 100 Plus
4 1348131 4 362671..362882 1039..1250 1060 100 Plus
4 1348131 4 362944..363134 1249..1439 955 100 Plus
4 1348131 4 369809..369966 3986..4143 790 100 Plus
4 1348131 4 363493..363642 1439..1588 750 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:09:45
Subject Length Description Subject Range Query Range Score Percent Strand
4 1331231 4 365671..366763 2657..3749 5465 100 Plus
4 1331231 4 363865..364942 1583..2660 5390 100 Plus
4 1331231 4 372249..372786 4772..5309 2690 100 Plus
4 1331231 4 360586..361006 308..728 2105 100 Plus
4 1331231 4 371811..372176 4407..4772 1830 100 Plus
4 1331231 4 362303..362613 728..1038 1555 100 Plus
4 1331231 4 359977..360284 1..308 1540 100 Plus
4 1331231 4 371091..371357 4142..4408 1335 100 Plus
4 1331231 4 369506..369744 3748..3986 1195 100 Plus
4 1331231 4 362671..362882 1039..1250 1060 100 Plus
4 1331231 4 362944..363134 1249..1439 955 100 Plus
4 1331231 4 369809..369966 3986..4143 790 100 Plus
4 1331231 4 363493..363642 1439..1588 750 100 Plus
Blast to na_te.dros performed 2019-03-16 20:27:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dbif\P-element_O 2986 Dbif\P-element_O P_O 2986bp Derived from X71634. 2602..2741 168..24 144 60.3 Minus

LD29768.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:27:50 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
chr4 383521..383709 1251..1439 100 -> Plus
chr4 384069..384214 1440..1585 100 -> Plus
chr4 391665..391931 4142..4408 100 -> Plus
chr4 380552..380859 1..308 100 -> Plus
chr4 381162..381581 309..728 100 -> Plus
chr4 382879..383188 729..1038 100 -> Plus
chr4 383246..383457 1039..1250 100 -> Plus
chr4 384443..385516 1586..2659 100 -> Plus
chr4 386248..387336 2660..3748 100 -> Plus
chr4 390081..390318 3749..3986 100 -> Plus
chr4 390384..390538 3987..4141 100 -> Plus
chr4 392387..392750 4409..4772 100 -> Plus
chr4 392824..393358 4773..5307 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:29:47 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RA 1..4503 413..4915 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:45:27 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RA 1..4503 413..4915 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:23:12 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RB 1..4503 413..4915 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:26:25 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RA 1..4503 413..4915 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:04:10 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RB 1..4503 413..4915 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:29:47 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RA 1..5307 1..5307 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:45:27 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RA 1..5307 1..5307 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:23:12 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RA 40..5346 1..5307 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:26:25 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RA 1..5307 1..5307 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:04:10 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
Hcf-RA 40..5346 1..5307 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:50 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
4 359977..360284 1..308 100 -> Plus
4 360587..361006 309..728 100 -> Plus
4 362304..362613 729..1038 100 -> Plus
4 362671..362882 1039..1250 100 -> Plus
4 362946..363134 1251..1439 100 -> Plus
4 363494..363639 1440..1585 100 -> Plus
4 363868..364941 1586..2659 100 -> Plus
4 365674..366762 2660..3748 100 -> Plus
4 369507..369744 3749..3986 100 -> Plus
4 369810..369964 3987..4141 100 -> Plus
4 371091..371357 4142..4408 100 -> Plus
4 371813..372176 4409..4772 100 -> Plus
4 372250..372784 4773..5307 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:50 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
4 359977..360284 1..308 100 -> Plus
4 360587..361006 309..728 100 -> Plus
4 362304..362613 729..1038 100 -> Plus
4 362671..362882 1039..1250 100 -> Plus
4 362946..363134 1251..1439 100 -> Plus
4 363494..363639 1440..1585 100 -> Plus
4 363868..364941 1586..2659 100 -> Plus
4 365674..366762 2660..3748 100 -> Plus
4 369507..369744 3749..3986 100 -> Plus
4 369810..369964 3987..4141 100 -> Plus
4 371091..371357 4142..4408 100 -> Plus
4 371813..372176 4409..4772 100 -> Plus
4 372250..372784 4773..5307 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:50 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
4 359977..360284 1..308 100 -> Plus
4 360587..361006 309..728 100 -> Plus
4 362304..362613 729..1038 100 -> Plus
4 362671..362882 1039..1250 100 -> Plus
4 362946..363134 1251..1439 100 -> Plus
4 363494..363639 1440..1585 100 -> Plus
4 363868..364941 1586..2659 100 -> Plus
4 365674..366762 2660..3748 100 -> Plus
4 369507..369744 3749..3986 100 -> Plus
4 369810..369964 3987..4141 100 -> Plus
4 371091..371357 4142..4408 100 -> Plus
4 371813..372176 4409..4772 100 -> Plus
4 372250..372784 4773..5307 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:12 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
arm_4 380603..380910 1..308 100 -> Plus
arm_4 381213..381632 309..728 100 -> Plus
arm_4 382930..383239 729..1038 100 -> Plus
arm_4 383297..383508 1039..1250 100 -> Plus
arm_4 383572..383760 1251..1439 100 -> Plus
arm_4 384120..384265 1440..1585 100 -> Plus
arm_4 384494..385567 1586..2659 100 -> Plus
arm_4 386300..387388 2660..3748 100 -> Plus
arm_4 390133..390370 3749..3986 100 -> Plus
arm_4 390436..390590 3987..4141 100 -> Plus
arm_4 391717..391983 4142..4408 100 -> Plus
arm_4 392439..392802 4409..4772 100 -> Plus
arm_4 392876..393410 4773..5307 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:59:24 Download gff for LD29768.complete
Subject Subject Range Query Range Percent Splice Strand
4 369810..369964 3987..4141 100 -> Plus
4 359977..360284 1..308 100 -> Plus
4 362304..362613 729..1038 100 -> Plus
4 360587..361006 309..728 100 -> Plus
4 362671..362882 1039..1250 100 -> Plus
4 362946..363134 1251..1439 100 -> Plus
4 363494..363639 1440..1585 100 -> Plus
4 363868..364941 1586..2659 100 -> Plus
4 365674..366762 2660..3748 100 -> Plus
4 369507..369744 3749..3986 100 -> Plus
4 371091..371357 4142..4408 100 -> Plus
4 371813..372176 4409..4772 100 -> Plus
4 372250..372784 4773..5307 100   Plus

LD29768.pep Sequence

Translation from 412 to 4914

> LD29768.pep
MEGSDFVDPAFSSGERISASDLNSEHIIQAENHSFANRISMDMDVPDGHQ
LDSNLTGFRWKRVLNPTGPQPRPRHGHRAINIKELMVVFGGGNEGIVDEL
HVYNTVTNQWYVPVLKGDVPNGCAAYGFVVEGTRMFVFGGMIEYGKYSNE
LYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGEKIFLFGGLANES
DDPKNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPPRESHTGISF
ATKSNGNLNLLIYGGMSGCRLGDLWLLETDSMTWSKPKTSGEAPLPRSLH
SSTMIGNKMYVFGGWVPLVINDSKSTTEREWKCTNTLAVLDLETMTWENV
TLDTVEENVPRARAGHCAVGIQSRLYVWSGRDGYRKAWNNQVCCKDLWYL
EVSKPLYAVKVALVRASTHALELSWTATTFAAAYVLQIQKIEQPLNTSSK
LLSNNIVQQGTPTSAETSGINISANRSGSALGLGVEATSTVLKLEKESLQ
LSGCQPETNVQPSVNDLLQSMSQPSSPASRADKDPLSSGGGTTFNLSTSV
ASVHPQISVISSTAAVTGNDTASPSGAINSILQKFRPVVTAVRTSTTTAV
SIATSTSDPLSVRVPSTMSANVVLSSSSSTLRIVPSVTASHSLRIASSQA
SGNNCRSSSAINILKTALPNVAVQSQPTSSTTTSIGGKQYFIQKPLTLAP
NVQLQFVKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQG
STVPGSQIQKPIVSGNVLKLVSPHTMAGGKLIMKNSNILQMGKVTPNVMG
GKPAFVITNKQGTPLGNQQIIIVTTGGNVRSVPTSTVMTSAGGSASGTNI
VSIVNSTSTTPSPLQALSGQKTLISNQSGVKMLRNISSVQASSSMAFGQK
QSGTPIHQKTALYIGGKAVTVMSTNTSMAASGNKVMVLPGTSSNNSPATT
TALSARKSFVFNAGGSPRTVTLATKSINAKSIPQSQPVTETNNHSVATIK
DTDPMDDIIEQLDGAGDLLKLSESEGQHGSEENENNGENATSSSASALFT
GGDTAGPSRAQNPIVMEHPVDIIEDVSGVSSTTDVNETAIVSGDTIESLK
MSEKENDDVKSMGEKSILSDDCHQPTTSETEAATILTTIKSAEALVLETA
EIRKDHTGCTIGSLKENQDENKKFKQRQESSPSQNIHQFQNVDGSQLEAL
ASAALLQAATSDTTALALKELIERPESETNTRSSNIAEIQQNNVQSTLAV
VVPNTSQNENQKWHTVGVFKDLSHTVTSYIDSNCISDSFFDGIDVDNLPD
FSKFPRTNLEPGTAYRFRLSAINSCGRGEWGEISSFKTCLPGFPGAPSAI
KISKDVKEGAHLTWEPPPAQKTKEIIEYSVYLAVKPTAKDKALSTPQLAF
VRVYVGAANQCTVPNASLSNAHVDCSNKPAIIFRIAARNQKGYGPATQVR
WLQDPAAAKQHTPTVTPNLKRGPEKSTIGSSNIANTFCSPHKRGRNGLHD
*

LD29768.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:40:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19570-PA 1483 GF19570-PA 1..1483 1..1500 4815 64.4 Plus
Dana\GF22299-PA 413 GF22299-PA 75..312 71..317 242 26.5 Plus
Dana\GF22299-PA 413 GF22299-PA 13..242 178..417 182 27.8 Plus
Dana\GF22052-PA 971 GF22052-PA 233..532 59..380 180 24.8 Plus
Dana\GF11964-PA 611 GF11964-PA 320..562 117..357 167 24.1 Plus
Dana\GF25117-PA 509 GF25117-PA 64..352 69..347 161 24 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:40:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16387-PA 1500 GG16387-PA 1..1500 1..1500 6967 90 Plus
Dere\GG18263-PA 403 GG18263-PA 75..307 71..312 235 25.4 Plus
Dere\GG18263-PA 403 GG18263-PA 13..242 178..417 206 28.2 Plus
Dere\GG12733-PA 975 GG12733-PA 237..536 59..380 177 25.1 Plus
Dere\GG13813-PA 507 GG13813-PA 64..352 69..347 173 25.4 Plus
Dere\GG21896-PA 609 GG21896-PA 316..560 115..357 161 24.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23616-PA 1572 GH23616-PA 8..1565 18..1496 3773 53.2 Plus
Dgri\GH11786-PA 143 GH11786-PA 11..142 71..204 550 73.9 Plus
Dgri\GH22551-PA 126 GH22551-PA 11..125 71..204 544 73.1 Plus
Dgri\GH22204-PA 126 GH22204-PA 11..125 71..204 531 71.6 Plus
Dgri\GH23800-PA 145 GH23800-PA 46..144 106..204 518 88.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
Hcf-PG 1500 CG1710-PG 1..1500 1..1500 7709 100 Plus
Hcf-PA 1500 CG1710-PA 1..1500 1..1500 7709 100 Plus
Hcf-PB 1500 CG1710-PB 1..1500 1..1500 7709 100 Plus
Hcf-PE 1484 CG1710-PE 1..1484 1..1500 7573 98.7 Plus
Hcf-PF 1448 CG1710-PF 1..1448 1..1500 7379 96.5 Plus
CG12081-PB 403 CG12081-PB 75..312 71..317 243 25.7 Plus
CG12081-PA 403 CG12081-PA 75..312 71..317 243 25.7 Plus
CG12081-PB 403 CG12081-PB 13..242 178..417 194 27.8 Plus
CG12081-PA 403 CG12081-PA 13..242 178..417 194 27.8 Plus
Muc68Ca-PA 3135 CG18331-PA 1144..1985 447..1288 182 19.8 Plus
Muc68Ca-PA 3135 CG18331-PA 105..877 446..1259 179 18.8 Plus
Muc68Ca-PA 3135 CG18331-PA 399..1272 460..1247 179 18.3 Plus
CG3711-PE 975 CG3711-PE 237..536 59..380 179 23.8 Plus
CG3711-PD 998 CG3711-PD 237..536 59..380 179 23.8 Plus
CG46026-PA 666 CG46026-PA 149..647 484..1004 177 19.2 Plus
Muc68Ca-PA 3135 CG18331-PA 1304..2145 447..1288 174 19.5 Plus
CG4069-PA 509 CG4069-PA 64..359 69..354 166 24.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:40:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14089-PA 1536 GI14089-PA 7..1522 13..1449 4081 57 Plus
Dmoj\GI15003-PA 968 GI15003-PA 229..529 59..380 186 24.4 Plus
Dmoj\GI20128-PA 608 GI20128-PA 292..560 94..357 182 27.4 Plus
Dmoj\GI15073-PA 200 GI15073-PA 13..189 178..372 155 27.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:40:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18169-PA 1461 GL18169-PA 1..1461 1..1500 4850 64.5 Plus
Dper\GL22550-PA 411 GL22550-PA 75..325 71..330 241 24.8 Plus
Dper\GL22550-PA 411 GL22550-PA 13..242 178..417 190 26.6 Plus
Dper\GL17778-PA 606 GL17778-PA 316..546 117..351 166 25.9 Plus
Dper\GL24939-PA 514 GL24939-PA 66..366 69..363 162 23.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14323-PA 1523 GA14323-PA 1..1523 1..1500 5046 66 Plus
Dpse\GA11382-PA 411 GA11382-PA 75..325 71..330 241 24.8 Plus
Dpse\GA11382-PA 411 GA11382-PA 13..242 178..417 190 26.6 Plus
Dpse\GA17633-PA 982 GA17633-PA 243..543 59..380 178 24.5 Plus
Dpse\GA18720-PA 609 GA18720-PA 319..549 117..351 166 25.9 Plus
Dpse\GA17934-PA 514 GA17934-PA 54..366 59..363 163 23.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26794-PA 822 GM26794-PA 1..811 1..812 4022 94.6 Plus
Dsec\GM26795-PA 359 GM26795-PA 192..359 1333..1500 930 99.4 Plus
Dsec\GM26795-PA 359 GM26795-PA 1..191 922..1112 865 90.1 Plus
Dsec\GM21713-PA 403 GM21713-PA 75..307 71..312 238 25.8 Plus
Dsec\GM21713-PA 403 GM21713-PA 13..242 178..417 205 27.8 Plus
Dsec\GM19013-PA 974 GM19013-PA 263..483 135..380 189 28.5 Plus
Dsec\GM19013-PA 974 GM19013-PA 236..535 59..380 183 24.5 Plus
Dsec\GM21887-PA 545 GM21887-PA 252..496 115..357 167 24.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:40:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24404-PA 487 GD24404-PA 1..481 105..585 2470 96 Plus
Dsim\GD17851-PA 696 GD17851-PA 1..350 722..1071 1682 94.3 Plus
Dsim\GD16450-PA 974 GD16450-PA 263..483 135..380 189 28.5 Plus
Dsim\GD16450-PA 974 GD16450-PA 236..535 59..380 182 24.5 Plus
Dsim\GD12706-PA 507 GD12706-PA 64..352 69..347 169 25.1 Plus
Dsim\GD11384-PA 329 GD11384-PA 36..276 115..353 161 26 Plus
Dsim\GD24404-PA 487 GD24404-PA 53..312 56..298 158 26.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16393-PA 1587 GJ16393-PA 1..1564 1..1477 4285 58.1 Plus
Dvir\GJ18879-PA 401 GJ18879-PA 75..312 71..317 241 25.7 Plus
Dvir\GJ18879-PA 401 GJ18879-PA 13..242 178..417 205 28.6 Plus
Dvir\GJ15361-PA 966 GJ15361-PA 227..527 59..380 180 24.4 Plus
Dvir\GJ19899-PA 596 GJ19899-PA 260..548 79..357 179 26.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:40:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13582-PA 1497 GK13582-PA 51..1159 56..1147 3316 60.7 Plus
Dwil\GK20037-PA 409 GK20037-PA 38..322 38..327 246 26.6 Plus
Dwil\GK10175-PA 937 GK10175-PA 197..497 59..380 196 24.6 Plus
Dwil\GK20037-PA 409 GK20037-PA 13..242 178..417 193 28.6 Plus
Dwil\GK22999-PA 627 GK22999-PA 316..567 88..351 172 27.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:40:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14548-PA 1503 GE14548-PA 1..1503 1..1500 7072 90.2 Plus
Dyak\GE15794-PA 403 GE15794-PA 75..307 71..312 236 25.4 Plus
Dyak\GE15794-PA 403 GE15794-PA 13..242 178..417 208 28.2 Plus
Dyak\GE16559-PA 984 GE16559-PA 245..545 59..380 191 25.1 Plus
Dyak\GE20107-PA 507 GE20107-PA 64..353 67..348 169 24.7 Plus
Dyak\GE11971-PA 611 GE11971-PA 318..562 115..357 163 24.2 Plus

LD29768.hyp Sequence

Translation from 412 to 4914

> LD29768.hyp
MEGSDFVDPAFSSGERISASDLNSEHIIQAENHSFANRISMDMDVPDGHQ
LDSNLTGFRWKRVLNPTGPQPRPRHGHRAINIKELMVVFGGGNEGIVDEL
HVYNTVTNQWYVPVLKGDVPNGCAAYGFVVEGTRMFVFGGMIEYGKYSNE
LYELQATKWEWRKMYPESPDSGLSPCPRLGHSFTMVGEKIFLFGGLANES
DDPKNNIPKYLNDLYILDTRGVHSHNGKWIVPKTYGDSPPPRESHTGISF
ATKSNGNLNLLIYGGMSGCRLGDLWLLETDSMTWSKPKTSGEAPLPRSLH
SSTMIGNKMYVFGGWVPLVINDSKSTTEREWKCTNTLAVLDLETMTWENV
TLDTVEENVPRARAGHCAVGIQSRLYVWSGRDGYRKAWNNQVCCKDLWYL
EVSKPLYAVKVALVRASTHALELSWTATTFAAAYVLQIQKIEQPLNTSSK
LLSNNIVQQGTPTSAETSGINISANRSGSALGLGVEATSTVLKLEKESLQ
LSGCQPETNVQPSVNDLLQSMSQPSSPASRADKDPLSSGGGTTFNLSTSV
ASVHPQISVISSTAAVTGNDTASPSGAINSILQKFRPVVTAVRTSTTTAV
SIATSTSDPLSVRVPSTMSANVVLSSSSSTLRIVPSVTASHSLRIASSQA
SGNNCRSSSAINILKTALPNVAVQSQPTSSTTTSIGGKQYFIQKPLTLAP
NVQLQFVKTSGGMTVQTLPKVNFTASKGTPPHGISIANPHLASGITQIQG
STVPGSQIQKPIVSGNVLKLVSPHTMAGGKLIMKNSNILQMGKVTPNVMG
GKPAFVITNKQGTPLGNQQIIIVTTGGNVRSVPTSTVMTSAGGSASGTNI
VSIVNSTSTTPSPLQALSGQKTLISNQSGVKMLRNISSVQASSSMAFGQK
QSGTPIHQKTALYIGGKAVTVMSTNTSMAASGNKVMVLPGTSSNNSPATT
TALSARKSFVFNAGGSPRTVTLATKSINAKSIPQSQPVTETNNHSVATIK
DTDPMDDIIEQLDGAGDLLKLSESEGQHGSEENENNGENATSSSASALFT
GGDTAGPSRAQNPIVMEHPVDIIEDVSGVSSTTDVNETAIVSGDTIESLK
MSEKENDDVKSMGEKSILSDDCHQPTTSETEAATILTTIKSAEALVLETA
EIRKDHTGCTIGSLKENQDENKKFKQRQESSPSQNIHQFQNVDGSQLEAL
ASAALLQAATSDTTALALKELIERPESETNTRSSNIAEIQQNNVQSTLAV
VVPNTSQNENQKWHTVGVFKDLSHTVTSYIDSNCISDSFFDGIDVDNLPD
FSKFPRTNLEPGTAYRFRLSAINSCGRGEWGEISSFKTCLPGFPGAPSAI
KISKDVKEGAHLTWEPPPAQKTKEIIEYSVYLAVKPTAKDKALSTPQLAF
VRVYVGAANQCTVPNASLSNAHVDCSNKPAIIFRIAARNQKGYGPATQVR
WLQDPAAAKQHTPTVTPNLKRGPEKSTIGSSNIANTFCSPHKRGRNGLHD
*

LD29768.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:01:35
Subject Length Description Subject Range Query Range Score Percent Strand
Hcf-PG 1500 CG1710-PG 1..1500 1..1500 7709 100 Plus
Hcf-PA 1500 CG1710-PA 1..1500 1..1500 7709 100 Plus
Hcf-PB 1500 CG1710-PB 1..1500 1..1500 7709 100 Plus
Hcf-PE 1484 CG1710-PE 1..1484 1..1500 7573 98.7 Plus
Hcf-PF 1448 CG1710-PF 1..1448 1..1500 7379 96.5 Plus