BDGP Sequence Production Resources |
Search the DGRC for LD29806
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 298 |
Well: | 6 |
Vector: | pOT2 |
Associated Gene/Transcript | CG10428-RA |
Protein status: | LD29806.pep: gold |
Preliminary Size: | 2073 |
Sequenced Size: | 1915 |
Gene | Date | Evidence |
---|---|---|
CG10428 | 2001-01-01 | Release 2 assignment |
CG10428 | 2001-09-19 | Blastp of sequenced clone |
CG10428 | 2003-01-01 | Sim4 clustering to Release 3 |
CG10428 | 2008-04-29 | Release 5.5 accounting |
CG10428 | 2008-08-15 | Release 5.9 accounting |
CG10428 | 2008-12-18 | 5.12 accounting |
1915 bp (1915 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058604
> LD29806.complete CCCAGCTGGTTTATAATTTTCTCGCTAATTTATTTTATTTTCGATTTTCG TTTAGTTTCCAATTTGTTTTGATGATCGGTTAATTAAACTATGGATCAGT TGTACCTGGAGATCGAGATCAGCACTCAAAAAGAGACCACCATTTATACT GGTGTGTCCTCGTTCTTGGCTTTGTTTACTTACAAATTTTTGAAAGATCC CAAAAATGTGCGAGTAAACTTCGTTTCCACAAAGATCGAAGGCGGTAAAA TAGCTTTACGGAGTTCCCAACTCAAAAAGGAACTGACCGACCGGCACATC ACATGCAGGGATGCCGCATCCTTGCCTGCCATCCAGGATCTAAAACTTCC AATCTACGAGAAGGACGGAAATACATTCATAGCAGGAACGTGTGCCGTTT GCCGAGAGCTTATTGCAAGACAACCAAATGAGGAACTCAAGAAACTTTTA GGCTTTAAGGGAAGCTGCCTCTTGGCTCCGTCAGAAGCATCGATTTGGAC TAAGTTCTGTGAGGTGGATTTAGTGGCTGTTGTCAGTAAACTTCATAGTG GGCAAGTTTTGGAATTCGTCCCCCAAGAAGTAGTGAGGTTCGAGCAGCAC ATGAACGAACCGGTGAGGATGCATAACATCTATAAACAGGCCAGAGAGCA GGCCAATCAGACTGAGAATGGCGGCAAGGTCAAGAGGAGAGAACGAGTGC AAATCAAGTGCACTACACCTAAGGAAGAGCTGCTTATTGAGCACCGCTTC GCCGAGGGCATCAGTTTCACAATTGCGGATATAATTTTGTACCCCCTTTT GAGAATTGTCTTCCAACATTGCGGGCAGATGCTGCCCCATTTTCCACTCA CTAGTACCTGGTTCAGCGAGATCGACTCTTTCGGCGATAAATGCGCCAGG GTTCTAAGAGATCTTTATGTGCCGCAAGCAATTAAGACCCCTCCCGGAGA ACTGGGAATCCCCGACTGCGAGGCCACCAGTCTGTACAAAGCCGATCCCA AGCGATACAAGCCAAGAAATCGGATTTACACTAGTCAGTTGGAGTTGGAA GCGGCTCTAAGTAAGCTTTCCTCGCTGCAACTGCAATTTAATTCCGATTC GGAGCACACCTATGGCCAGCAGCTGATCGACTGGGAGCAGATTGAGCCCA CTCATGCTAAGAGTTCAGCGCTGCCCAAGGAGAGACTCGAGCGCAAGAGG CAGCAGCTAGAGAACTTGGCCAATGCGGTGGTTTCCCTGGCTCAACCGGG CGACCGCATTGTGGACTTCTGCAGCGGCACAGGGCATTTGGCCATACTGC TGGCCCTCAAGCTGCCAAATTGTACCATTATTGTGATGGAAAACAAAGCT TTCTCCCTGCTTCAAGCTCAGAAAAGATCAAACGAATTGGGTTTGACCAA CTGCGTTTTTTACCAATGCAACATAGATTACTTTGTCGGAGGATTCAAGA TCGGGGCCTCTTTGCACGCGTGTGGAACGGCGACAGATATCGTTTTGCAG CAGTGCCGGAGAGCCAAGGCACATTTTGTTTGCTGTCCTTGCTGCTACGG TTCTCTGCAGCCCATGCCTCACATTTCGTACCCATTGAGCAAAGCGTTCC AAAAGGTGTTAGACACAAAGGACTACTTGTACATTGCCCACTCGGCAGAT CAGGCACACGAGATGGGGACAACCAACTGCAAGCCAGAAACCACGCTTCA AGGACTCCACTGCATGTCCGTGGTGGACACCGATCGCCTGCTGCAGGCGG AGGAGGCGGGCTACCAGGTCATTCTCACACGCTTAAAGCCCGAACAGTGT ACGCCAAAGAATCACCTGCTAGTCGGACGTTTTGTTAAACAGAACTGAAC TTACAATCTGCCACTGAGACAAAATAAATGCCTTTTTGATATGTTTTAAA AAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10428-RA | 1929 | CG10428-RA | 26..1925 | 1..1900 | 9485 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 18948630..18949658 | 869..1897 | 5115 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 18948113..18948579 | 404..870 | 2290 | 99.4 | Plus |
chr2L | 23010047 | chr2L | 18947593..18947826 | 1..234 | 1170 | 100 | Plus |
chr2L | 23010047 | chr2L | 18947885..18948057 | 232..404 | 865 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18949945..18950976 | 869..1900 | 5145 | 99.9 | Plus |
2L | 23513712 | 2L | 18949428..18949894 | 404..870 | 2335 | 100 | Plus |
2L | 23513712 | 2L | 18948908..18949141 | 1..234 | 1170 | 100 | Plus |
2L | 23513712 | 2L | 18949200..18949372 | 232..404 | 865 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 18949945..18950976 | 869..1900 | 5145 | 99.9 | Plus |
2L | 23513712 | 2L | 18949428..18949894 | 404..870 | 2335 | 100 | Plus |
2L | 23513712 | 2L | 18948908..18949141 | 1..234 | 1170 | 100 | Plus |
2L | 23513712 | 2L | 18949200..18949372 | 232..404 | 865 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 18947593..18947826 | 1..234 | 100 | -> | Plus |
chr2L | 18947888..18948057 | 235..404 | 100 | -> | Plus |
chr2L | 18948114..18948579 | 405..870 | 99 | -> | Plus |
chr2L | 18948632..18949658 | 871..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 1..1758 | 91..1848 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 1..1758 | 91..1848 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 1..1758 | 91..1848 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 1..1758 | 91..1848 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 1..1758 | 91..1848 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 12..1908 | 1..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 12..1908 | 1..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 25..1921 | 1..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 12..1908 | 1..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG10428-RA | 25..1921 | 1..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18948908..18949141 | 1..234 | 100 | -> | Plus |
2L | 18949203..18949372 | 235..404 | 100 | -> | Plus |
2L | 18949429..18949894 | 405..870 | 100 | -> | Plus |
2L | 18949947..18950973 | 871..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18948908..18949141 | 1..234 | 100 | -> | Plus |
2L | 18949203..18949372 | 235..404 | 100 | -> | Plus |
2L | 18949429..18949894 | 405..870 | 100 | -> | Plus |
2L | 18949947..18950973 | 871..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18948908..18949141 | 1..234 | 100 | -> | Plus |
2L | 18949203..18949372 | 235..404 | 100 | -> | Plus |
2L | 18949429..18949894 | 405..870 | 100 | -> | Plus |
2L | 18949947..18950973 | 871..1897 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 18949947..18950973 | 871..1897 | 99 | Plus | |
arm_2L | 18948908..18949141 | 1..234 | 100 | -> | Plus |
arm_2L | 18949203..18949372 | 235..404 | 100 | -> | Plus |
arm_2L | 18949429..18949894 | 405..870 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 18949203..18949372 | 235..404 | 100 | -> | Plus |
2L | 18948908..18949141 | 1..234 | 100 | -> | Plus |
2L | 18949429..18949894 | 405..870 | 100 | -> | Plus |
2L | 18949947..18950973 | 871..1897 | 99 | Plus |
Translation from 90 to 1847
> LD29806.pep MDQLYLEIEISTQKETTIYTGVSSFLALFTYKFLKDPKNVRVNFVSTKIE GGKIALRSSQLKKELTDRHITCRDAASLPAIQDLKLPIYEKDGNTFIAGT CAVCRELIARQPNEELKKLLGFKGSCLLAPSEASIWTKFCEVDLVAVVSK LHSGQVLEFVPQEVVRFEQHMNEPVRMHNIYKQAREQANQTENGGKVKRR ERVQIKCTTPKEELLIEHRFAEGISFTIADIILYPLLRIVFQHCGQMLPH FPLTSTWFSEIDSFGDKCARVLRDLYVPQAIKTPPGELGIPDCEATSLYK ADPKRYKPRNRIYTSQLELEAALSKLSSLQLQFNSDSEHTYGQQLIDWEQ IEPTHAKSSALPKERLERKRQQLENLANAVVSLAQPGDRIVDFCSGTGHL AILLALKLPNCTIIVMENKAFSLLQAQKRSNELGLTNCVFYQCNIDYFVG GFKIGASLHACGTATDIVLQQCRRAKAHFVCCPCCYGSLQPMPHISYPLS KAFQKVLDTKDYLYIAHSADQAHEMGTTNCKPETTLQGLHCMSVVDTDRL LQAEEAGYQVILTRLKPEQCTPKNHLLVGRFVKQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15257-PA | 588 | GF15257-PA | 1..588 | 1..585 | 2732 | 84.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21139-PA | 585 | GG21139-PA | 1..585 | 1..585 | 2993 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10169-PA | 586 | GH10169-PA | 1..586 | 1..581 | 2497 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10428-PA | 585 | CG10428-PA | 1..585 | 1..585 | 3061 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14206-PA | 588 | GI14206-PA | 1..588 | 1..584 | 2528 | 77.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18497-PA | 586 | GL18497-PA | 1..586 | 1..585 | 2689 | 84 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10313-PA | 586 | GA10313-PA | 1..586 | 1..585 | 2702 | 84.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17301-PA | 546 | GM17301-PA | 1..546 | 1..585 | 2807 | 90.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24163-PA | 264 | GD24163-PA | 1..257 | 1..257 | 1345 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20475-PA | 589 | GJ20475-PA | 1..589 | 1..585 | 2550 | 78.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24345-PA | 589 | GK24345-PA | 1..586 | 1..581 | 2391 | 74.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13213-PA | 585 | GE13213-PA | 1..585 | 1..585 | 3016 | 95.2 | Plus |
Translation from 90 to 1847
> LD29806.hyp MDQLYLEIEISTQKETTIYTGVSSFLALFTYKFLKDPKNVRVNFVSTKIE GGKIALRSSQLKKELTDRHITCRDAASLPAIQDLKLPIYEKDGNTFIAGT CAVCRELIARQPNEELKKLLGFKGSCLLAPSEASIWTKFCEVDLVAVVSK LHSGQVLEFVPQEVVRFEQHMNEPVRMHNIYKQAREQANQTENGGKVKRR ERVQIKCTTPKEELLIEHRFAEGISFTIADIILYPLLRIVFQHCGQMLPH FPLTSTWFSEIDSFGDKCARVLRDLYVPQAIKTPPGELGIPDCEATSLYK ADPKRYKPRNRIYTSQLELEAALSKLSSLQLQFNSDSEHTYGQQLIDWEQ IEPTHAKSSALPKERLERKRQQLENLANAVVSLAQPGDRIVDFCSGTGHL AILLALKLPNCTIIVMENKAFSLLQAQKRSNELGLTNCVFYQCNIDYFVG GFKIGASLHACGTATDIVLQQCRRAKAHFVCCPCCYGSLQPMPHISYPLS KAFQKVLDTKDYLYIAHSADQAHEMGTTNCKPETTLQGLHCMSVVDTDRL LQAEEAGYQVILTRLKPEQCTPKNHLLVGRFVKQN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG10428-PA | 585 | CG10428-PA | 1..585 | 1..585 | 3061 | 100 | Plus |