BDGP Sequence Production Resources |
Search the DGRC for LD29815
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 298 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | Arpc2-RA |
Protein status: | LD29815.pep: gold |
Preliminary Size: | 2262 |
Sequenced Size: | 1935 |
Gene | Date | Evidence |
---|---|---|
CG10954 | 2001-01-01 | Release 2 assignment |
CG10954 | 2001-09-19 | Blastp of sequenced clone |
CG10954 | 2003-01-01 | Sim4 clustering to Release 3 |
Arc-p34 | 2008-04-29 | Release 5.5 accounting |
Arc-p34 | 2008-08-15 | Release 5.9 accounting |
Arc-p34 | 2008-12-18 | 5.12 accounting |
1935 bp (1935 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060391
> LD29815.complete ACGCTGTGAGCAAGGAAAATACGGCAGCGTGCTCCCCGTTTTCCATCCAC GTTTTGTTATAATTTTATAAGTATTACGGTCTGAGACCGATTTTGCACTG CATCGTGCGCGCTGCAAGTACTGGCGATTGGAAATTGGAGGCGCGAAAAG AGGATAAGGTGGATTTTCTTGCAACTGTGTGTGTGAGCATTGGAATTCGC CCGTGTGTGTGGCGAGAGTGCGTCCATGTGTGTGTGACGGACCAAAAAAG CCGACATCAGCGCCCATTTTTTGTTGTTGATTCATTAATACGCCCGTCAT GCACCAGTATTGGTGAGTTGGAGCAGCGCACCGTCTTACTCGCACTCAAC GGAGCGCAGAAAGAGCGCAGGGAGCGGCAGAAGAAGAAGCAGCGAGCAGC AGCACCATTAGCGGCAGTCAACGTCATATAATTTGTCATCGAAATTGGCA CACTAAAAATAACAGTTAACTTCAACCGCCATGATCCTGCTGGAAATCAA TAATCGGATTATCGAGGAGACGCTGCTGGTCAAATACCGTAATGCCCAGG CTGGACTGAAGCCTGAATCGATAGACATACGAATAGCAGACTTCGACGGC GTCCTTTATCACATTTCCAATGTGAATGGCGATAAAACAAAAGTTCGGAT CAGCATATCGCTGAAGTTCTACAAACAGCTGCAAGAACATGGAGCCGACG AGTTGCTGAAGCGTGAATATGGCAGTCTGCTTACAGACACGGAAGAAGGC TACAATGTTTCCGTACTTATCAACCTGGAGGAGATTCCCGAGGACTGCGA GCAAATCGCAAAGAGAATCGGACTGCTGAAGCGCAACTGTTTCGCATCGG TTTTTGAAAAGTATTTTGACTATCAGGAGCAGGGCGAAGAGGGCCAAAAG CGTGCCGTCATTAACTACCGCAACGATGAGACTTTATATGTGGAAGCCAA GCCTGATCGTGTCACCGTCGTCTTTAGTACCATTTTCCGGGACGAAGACG ATGTCATTATCGGCAAAGTATTTATGCAGGAATTGAGGGAAGGTCGGCGT GCCTCGCACACCGCACCACAAGTGCTCTTTTCGCACCGAGAACCACCATT GGAATTGGCCAACACGGACGCTAGGGTGGGCGACAACATTGGCTATGTCA CATTCGTACTCTTCCCTCGGCATACCAACAAAGAAACAAGGGACAATACC ATTAACTTAATTCACATGTTCCGAGATTACTTGCACTACCACATTAAGTG TTCAAAGGCTTACATTCATTCGCGCATGCGAGCAAAAACCTCGGATTTCC TCAAGGTGCTAAATCGTGCAAGGCCAGAGCCCAAAAACACGGAGAAGAAA ACTATAACGGGGAGAACTTTCAAGCGCATCGATTGATGTGTTCAGTATAT TTAGTTGTTTTTATATAAATACAAAAAATAAATTGTGTATTAAAATTCGA TATCCGAATGGTGAATCCAACATAAACTAAACCAGATTGCAAGACAAACC CAAGTATTCCAAACAGAACCGTAAGGCTAAATGTAAGCTCAGCAAAATAA TGATCAAAGAATTAATAGTTACGCGTTAGTAAATGAATTGTGTGTGTTTG TGTCGAGTCATCGTCAAATCCGTGTCTCCGCCAATTTGTTACAGTCATAG GCCGAGTCAGCGCCACAGCTGAGCCGCATTTTAAACAAATAAACGTAGAC TTAAGTGCAACATGAGAACTAAAACTACCATGTCAAAGCGAGCAACACGA CTAAGGGATGCCACCAACTTGTTATATAGTCGCAATGGAGGATTCATCCC CGCAATTAGCCTGTATGTGTAGAAAGCGCATTTAAAAACGTACTGCAAAT ATTAACAAACCTTTGATACAGCAATCGGAATTAATAAAAACGAGAAAATC AAACTGCAATGTAAAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 20420887..20421445 | 1359..1917 | 2795 | 100 | Plus |
chr2L | 23010047 | chr2L | 20415523..20416076 | 1..554 | 2755 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 20419315..20419535 | 936..1156 | 1105 | 100 | Plus |
chr2L | 23010047 | chr2L | 20419064..20419252 | 747..935 | 945 | 100 | Plus |
chr2L | 23010047 | chr2L | 20420718..20420830 | 1247..1359 | 565 | 100 | Plus |
chr2L | 23010047 | chr2L | 20418907..20419008 | 648..749 | 510 | 100 | Plus |
chr2L | 23010047 | chr2L | 20420562..20420654 | 1156..1248 | 465 | 100 | Plus |
chr2L | 23010047 | chr2L | 20418736..20418830 | 554..648 | 460 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20422469..20423034 | 1359..1924 | 2830 | 100 | Plus |
2L | 23513712 | 2L | 20417114..20417667 | 1..554 | 2770 | 100 | Plus |
2L | 23513712 | 2L | 20420897..20421117 | 936..1156 | 1105 | 100 | Plus |
2L | 23513712 | 2L | 20420646..20420834 | 747..935 | 945 | 100 | Plus |
2L | 23513712 | 2L | 20422300..20422412 | 1247..1359 | 565 | 100 | Plus |
2L | 23513712 | 2L | 20420489..20420590 | 648..749 | 510 | 100 | Plus |
2L | 23513712 | 2L | 20420318..20420412 | 554..648 | 475 | 100 | Plus |
2L | 23513712 | 2L | 20422144..20422236 | 1156..1248 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 20422469..20423034 | 1359..1924 | 2830 | 100 | Plus |
2L | 23513712 | 2L | 20417114..20417667 | 1..554 | 2770 | 100 | Plus |
2L | 23513712 | 2L | 20420897..20421117 | 936..1156 | 1105 | 100 | Plus |
2L | 23513712 | 2L | 20420646..20420834 | 747..935 | 945 | 100 | Plus |
2L | 23513712 | 2L | 20422300..20422412 | 1247..1359 | 565 | 100 | Plus |
2L | 23513712 | 2L | 20420489..20420590 | 648..749 | 510 | 100 | Plus |
2L | 23513712 | 2L | 20420318..20420412 | 554..648 | 475 | 100 | Plus |
2L | 23513712 | 2L | 20422144..20422236 | 1156..1248 | 465 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 4513..4576 | 373..428 | 123 | 70.3 | Plus |
Bari1 | 1728 | Bari1 DMBARI1 1728bp AKA(S55767) Derived from X67681 (g7640) (Rel. 36, Last updated, Version 6). | 1386..1459 | 1439..1365 | 120 | 64 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 20415523..20416076 | 1..554 | 99 | -> | Plus |
chr2L | 20418737..20418830 | 555..648 | 98 | -> | Plus |
chr2L | 20418908..20419007 | 649..748 | 100 | -> | Plus |
chr2L | 20419066..20419252 | 749..935 | 100 | -> | Plus |
chr2L | 20419315..20419535 | 936..1156 | 100 | -> | Plus |
chr2L | 20420563..20420654 | 1157..1248 | 100 | -> | Plus |
chr2L | 20420720..20420829 | 1249..1358 | 100 | -> | Plus |
chr2L | 20420887..20421445 | 1359..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arc-p34-RA | 1..906 | 481..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arc-p34-RA | 1..906 | 481..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arpc2-RA | 1..906 | 481..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arc-p34-RA | 1..906 | 481..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arpc2-RA | 1..906 | 481..1386 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arc-p34-RA | 54..1970 | 1..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arc-p34-RA | 54..1970 | 1..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arpc2-RA | 54..1970 | 1..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arc-p34-RA | 54..1970 | 1..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Arpc2-RA | 25..1941 | 1..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20422145..20422236 | 1157..1248 | 100 | -> | Plus |
2L | 20422302..20422411 | 1249..1358 | 100 | -> | Plus |
2L | 20417114..20417667 | 1..554 | 100 | -> | Plus |
2L | 20420319..20420412 | 555..648 | 100 | -> | Plus |
2L | 20420490..20420589 | 649..748 | 100 | -> | Plus |
2L | 20420648..20420834 | 749..935 | 100 | -> | Plus |
2L | 20420897..20421117 | 936..1156 | 100 | -> | Plus |
2L | 20422469..20423027 | 1359..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20422145..20422236 | 1157..1248 | 100 | -> | Plus |
2L | 20422302..20422411 | 1249..1358 | 100 | -> | Plus |
2L | 20417114..20417667 | 1..554 | 100 | -> | Plus |
2L | 20420319..20420412 | 555..648 | 100 | -> | Plus |
2L | 20420490..20420589 | 649..748 | 100 | -> | Plus |
2L | 20420648..20420834 | 749..935 | 100 | -> | Plus |
2L | 20420897..20421117 | 936..1156 | 100 | -> | Plus |
2L | 20422469..20423027 | 1359..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20422145..20422236 | 1157..1248 | 100 | -> | Plus |
2L | 20422302..20422411 | 1249..1358 | 100 | -> | Plus |
2L | 20417114..20417667 | 1..554 | 100 | -> | Plus |
2L | 20420319..20420412 | 555..648 | 100 | -> | Plus |
2L | 20420490..20420589 | 649..748 | 100 | -> | Plus |
2L | 20420648..20420834 | 749..935 | 100 | -> | Plus |
2L | 20420897..20421117 | 936..1156 | 100 | -> | Plus |
2L | 20422469..20423027 | 1359..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 20417114..20417667 | 1..554 | 100 | -> | Plus |
arm_2L | 20420319..20420412 | 555..648 | 100 | -> | Plus |
arm_2L | 20420490..20420589 | 649..748 | 100 | -> | Plus |
arm_2L | 20420648..20420834 | 749..935 | 100 | -> | Plus |
arm_2L | 20420897..20421117 | 936..1156 | 100 | -> | Plus |
arm_2L | 20422145..20422236 | 1157..1248 | 100 | -> | Plus |
arm_2L | 20422302..20422411 | 1249..1358 | 100 | -> | Plus |
arm_2L | 20422469..20423027 | 1359..1917 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 20417114..20417667 | 1..554 | 100 | -> | Plus |
2L | 20420319..20420412 | 555..648 | 100 | -> | Plus |
2L | 20420490..20420589 | 649..748 | 100 | -> | Plus |
2L | 20420648..20420834 | 749..935 | 100 | -> | Plus |
2L | 20420897..20421117 | 936..1156 | 100 | -> | Plus |
2L | 20422145..20422236 | 1157..1248 | 100 | -> | Plus |
2L | 20422302..20422411 | 1249..1358 | 100 | -> | Plus |
2L | 20422469..20423027 | 1359..1917 | 100 | Plus |
Translation from 480 to 1385
> LD29815.pep MILLEINNRIIEETLLVKYRNAQAGLKPESIDIRIADFDGVLYHISNVNG DKTKVRISISLKFYKQLQEHGADELLKREYGSLLTDTEEGYNVSVLINLE EIPEDCEQIAKRIGLLKRNCFASVFEKYFDYQEQGEEGQKRAVINYRNDE TLYVEAKPDRVTVVFSTIFRDEDDVIIGKVFMQELREGRRASHTAPQVLF SHREPPLELANTDARVGDNIGYVTFVLFPRHTNKETRDNTINLIHMFRDY LHYHIKCSKAYIHSRMRAKTSDFLKVLNRARPEPKNTEKKTITGRTFKRI D*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15118-PA | 301 | GF15118-PA | 1..301 | 1..301 | 1578 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21231-PA | 301 | GG21231-PA | 1..301 | 1..301 | 1586 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10132-PA | 301 | GH10132-PA | 1..299 | 1..299 | 1540 | 97 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Arpc2-PB | 301 | CG10954-PB | 1..301 | 1..301 | 1554 | 100 | Plus |
Arpc2-PA | 301 | CG10954-PA | 1..301 | 1..301 | 1554 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22182-PA | 301 | GI22182-PA | 1..299 | 1..299 | 1510 | 95.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26606-PA | 70 | GL26606-PA | 1..70 | 1..72 | 329 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10664-PA | 301 | GA10664-PA | 1..301 | 1..301 | 1574 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23346-PA | 301 | GM23346-PA | 1..301 | 1..301 | 1597 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24255-PA | 301 | GD24255-PA | 1..301 | 1..301 | 1597 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20052-PA | 147 | GJ20052-PA | 65..145 | 219..299 | 387 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18265-PA | 301 | GK18265-PA | 1..299 | 1..299 | 1533 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Arc-p34-PA | 301 | GE13307-PA | 1..301 | 1..301 | 1591 | 99.3 | Plus |
Translation from 480 to 1385
> LD29815.hyp MILLEINNRIIEETLLVKYRNAQAGLKPESIDIRIADFDGVLYHISNVNG DKTKVRISISLKFYKQLQEHGADELLKREYGSLLTDTEEGYNVSVLINLE EIPEDCEQIAKRIGLLKRNCFASVFEKYFDYQEQGEEGQKRAVINYRNDE TLYVEAKPDRVTVVFSTIFRDEDDVIIGKVFMQELREGRRASHTAPQVLF SHREPPLELANTDARVGDNIGYVTFVLFPRHTNKETRDNTINLIHMFRDY LHYHIKCSKAYIHSRMRAKTSDFLKVLNRARPEPKNTEKKTITGRTFKRI D*