Clone LD29830 Report

Search the DGRC for LD29830

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:298
Well:30
Vector:pOT2
Associated Gene/TranscriptSrp54-RA
Protein status:LD29830.pep: gold
Preliminary Size:2411
Sequenced Size:2095

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4602 2001-01-01 Release 2 assignment
CG4602 2001-11-29 Blastp of sequenced clone
CG4602 2003-01-01 Sim4 clustering to Release 3
Srp54 2008-04-29 Release 5.5 accounting
Srp54 2008-08-15 Release 5.9 accounting
Srp54 2008-12-18 5.12 accounting

Clone Sequence Records

LD29830.complete Sequence

2095 bp (2095 high quality bases) assembled on 2001-11-29

GenBank Submission: AY069568

> LD29830.complete
ACCCTCTCTTTTTTTCGCTTGCTCTTGTAGGTTAATTGAAAACACTTTTA
TTGCAAATAAACCGCTTGCCGAGCCAAGGGCAAACCGATAAACTGGCAAA
CATGGCTGGCGGCAACACCCCGCGTGTGATCCAGGTGACCAACATAGCGC
CGCAGGCCACCAAGGACCAGATGCAGACGCTGTTCGGGAACATTGGCAAG
ATAGAGGAGATCCGCCTGTACCCGACAATCCGTGATGTCTCCTGTCCGGT
GCAGTCGCGCATCTGCTATGTGAAATACACGGACACGACCAGTGTGCCGG
TGGCCCAGCACTTGACCAACACGGTGTTCATCGATCGCGCCCTAATTGTC
ATACCCGTTCTGGCCATACCCGAGGAGTATCGGGCCCTGGAGATGCTCAA
GAACGGAACCATTGTGCCGGGACTCCAGAAGCCGGACTCCAAGCTACCGC
CCGAAGTCATTAACCGCATCGAGGGACAGCTGCCGCAGCAAGTGATCAAG
ACGTACGACCCCAAGTTGGTGGAATTCAATCTGCCGGAGTACCCGGCCTT
ACCCTCGTTCTACGATGCGCGCAAAATCGAGGAGATTCGGCGCACCATTA
TCGTGTGCGATGTTAAGAACGAGTGGCGGCTAGACGATCTGATGGAATGC
TTTCAGCGCGCTGGGGAGGTGAAGTATGCCCGTTGGGCCGAGAAGGATAA
CAAGACGTACTGCATGATTGAGTTCTGCGAACAGACCAGCATTATTCACG
CCCTGCGCATGCAGGGCCAGGAGTTCAAGGGTGGCCATCTAAGCGTCTAC
CACTCCACGTATTCCATAACCAAGCCGGAGGCAAAGTCGAATGAGGCAGC
GCAGGCTGAGATTGAGGAGGCCATGACCATTGTGAAAGAGGCGCAGAGTA
TGATCTCAGCGGCCATTGATCCGGTAATTGGAATGCTCGCTAAGGACAAG
CGCCGCAGGTCGAGATCACGGTCCCGTTCCCGGGACCGTCGCACCAGTCG
ATCCCGCTCGCATCGTTCCACATCGAGACGCCGTTCCAGGCGTTCCGGTT
CCAGAGAGCGACGTAGTGTGTCCCGATCACGCCGCTCTAGGTCGCGTGGC
AAGCACTCGTCCCGTTCTCGCAGCAAGCGCTCAAGATCACGACACCGTCG
CAGCTCCTCACGTTCCAGGAGATCACGCTCCCGTGGCGGCAAGCACTCTC
GCTCCTCAAGGTCGCGTGGCAAGCGCTCCAGGTCCCGCCATCGCCGCAGC
ACCTCACGCTCACGTAGCTCGCGTTCCCATGGCACCGGTGGAGGAGGCAG
TGGCAACGGCAAACGTTCCCGATCCCGCGAGCGCAGCAAGAAGTCACACC
GCAGCGAGAAGCACTCTTCACGTTCTCCCCGATCTAGAAGCAAGCGCAGC
TCTCCCTCGCCGCCGCCAGCTACCGGCAGTAAGTCACGGTCCAGTCGCAG
CAAGGATCCGGTCATCGTTTCCGCCAAGTCATCCCGGCGGCGCGACCGCT
CCCGTACTCCCGAAACTCGCAAACTCAAATCCATCTCTGAGGACACTGAG
GTTAAGAGCTCACGATCCAGCGCCGATTCGAAGTCACGCAAATCGGTTAG
TGTCGAGAAGTCGGACAACATGGACATCTCCAACTCGCCCTAGACCTAGA
GAGATTGCATACTACTTTATAATAAATACAGAACTTAAGCAACCCCGTCT
CCAGTACAACCCGACACCCATTGTCCTCAATGAGATTTGTATTTCACTCA
ACTCTGTCATAGTTTTCAAGTATAAAGTCTAATTAAAACTGAAGCATTTT
CTTTCGTAATGAAAAAAATAGTACATACAAATATGAATGATATCGGTATC
ATAGCAGTACAATTTTTTTTAATTTTTTGCCAAGTACGGATTGTTTATTT
GGAAACTATAACAATCTTATTGTCTTCTTATTAGGAAAACCCAATACAAA
TGCAAGTTAAATTAATAAAAAACTTTCTAATGAAGACCAACTTTAAAACA
TTGTATGATCAACATTTTGTAAGGAGTACTTAAGTATGCAAAATTGCTTT
GATAAATATACATTAAGAACGCATTAAAAAAAAAAAAAAAAAAAA

LD29830.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:55:16
Subject Length Description Subject Range Query Range Score Percent Strand
Srp54-RA 2138 Srp54-RA 41..2118 1..2078 10390 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 9911878..9913942 10..2075 10175 99.6 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:23:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9912947..9915024 1..2078 10390 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:20:45
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 9912947..9915024 1..2078 10390 100 Plus
Blast to na_te.dros performed on 2019-03-16 20:27:17 has no hits.

LD29830.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:27:53 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 9911870..9913942 1..2075 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 19:10:25 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 1..1542 102..1643 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 19:26:26 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 1..1542 102..1643 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:23:15 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 1..1542 102..1643 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 19:53:49 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 1..1542 102..1643 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:04:16 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 1..1542 102..1643 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 23:02:50 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 41..2115 1..2075 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 19:26:26 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 41..2115 1..2075 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:23:15 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 37..2111 1..2075 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 19:53:49 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 41..2115 1..2075 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:04:16 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
Srp54-RA 37..2111 1..2075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:53 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9912947..9915021 1..2075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:53 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9912947..9915021 1..2075 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:27:53 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9912947..9915021 1..2075 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:23:15 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 9912947..9915021 1..2075 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 16:29:54 Download gff for LD29830.complete
Subject Subject Range Query Range Percent Splice Strand
2L 9912947..9915021 1..2075 100   Plus

LD29830.pep Sequence

Translation from 101 to 1642

> LD29830.pep
MAGGNTPRVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPV
QSRICYVKYTDTTSVPVAQHLTNTVFIDRALIVIPVLAIPEEYRALEMLK
NGTIVPGLQKPDSKLPPEVINRIEGQLPQQVIKTYDPKLVEFNLPEYPAL
PSFYDARKIEEIRRTIIVCDVKNEWRLDDLMECFQRAGEVKYARWAEKDN
KTYCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSITKPEAKSNEAA
QAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDKRRRSRSRSRSRDRRTSR
SRSHRSTSRRRSRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRR
SSSRSRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRSSRSHGTGGGGS
GNGKRSRSRERSKKSHRSEKHSSRSPRSRSKRSSPSPPPATGSKSRSSRS
KDPVIVSAKSSRRRDRSRTPETRKLKSISEDTEVKSSRSSADSKSRKSVS
VEKSDNMDISNSP*

LD29830.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 10:30:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15723-PA 514 GF15723-PA 1..514 1..513 1766 95.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 10:30:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10062-PA 513 GG10062-PA 1..513 1..513 2596 98.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 10:30:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11300-PA 521 GH11300-PA 1..283 1..283 1505 97.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
Srp54-PA 513 CG4602-PA 1..513 1..513 2586 100 Plus
CG9915-PC 820 CG9915-PC 240..522 285..513 291 41 Plus
CG9915-PB 820 CG9915-PB 240..522 285..513 291 41 Plus
CG9915-PC 820 CG9915-PC 219..440 285..500 284 48.1 Plus
CG9915-PB 820 CG9915-PB 219..440 285..500 284 48.1 Plus
CG9915-PC 820 CG9915-PC 160..388 285..500 283 44.3 Plus
CG9915-PB 820 CG9915-PB 160..388 285..500 283 44.3 Plus
CG9915-PC 820 CG9915-PC 16..316 236..495 282 38.5 Plus
CG9915-PB 820 CG9915-PB 16..316 236..495 282 38.5 Plus
CG9915-PC 820 CG9915-PC 175..404 288..500 278 43.7 Plus
CG9915-PB 820 CG9915-PB 175..404 288..500 278 43.7 Plus
CG9915-PC 820 CG9915-PC 191..416 285..500 273 44.3 Plus
CG9915-PB 820 CG9915-PB 191..416 285..500 273 44.3 Plus
CG9915-PC 820 CG9915-PC 112..365 285..512 270 40.4 Plus
CG9915-PB 820 CG9915-PB 112..365 285..512 270 40.4 Plus
CG6695-PB 715 CG6695-PB 360..554 236..441 247 43.8 Plus
CG6695-PA 961 CG6695-PA 360..554 236..441 247 43.8 Plus
CG9915-PC 820 CG9915-PC 319..525 283..493 244 42.2 Plus
CG9915-PB 820 CG9915-PB 319..525 283..493 244 42.2 Plus
B52-PN 350 CG10851-PN 186..349 295..452 227 41.7 Plus
B52-PC 350 CG10851-PC 186..349 295..452 227 41.7 Plus
B52-PA 350 CG10851-PA 186..349 295..452 227 41.7 Plus
B52-PO 355 CG10851-PO 191..354 295..452 227 41.7 Plus
B52-PM 355 CG10851-PM 191..354 295..452 227 41.7 Plus
Ctr9-PA 1150 CG2469-PA 975..1147 241..422 225 42.2 Plus
Ctr9-PB 1150 CG2469-PB 975..1147 241..422 225 42.2 Plus
CG7971-PG 1062 CG7971-PG 365..617 241..497 221 30.3 Plus
CG7971-PA 1062 CG7971-PA 365..617 241..497 221 30.3 Plus
CG7971-PC 1107 CG7971-PC 365..617 241..497 221 30.3 Plus
CG7971-PF 1655 CG7971-PF 590..842 241..497 221 30.3 Plus
Atu-PA 725 CG1433-PA 34..275 285..513 217 35.3 Plus
Atu-PA 725 CG1433-PA 3..228 291..513 214 35.9 Plus
CG5808-PA 653 CG5808-PA 430..642 291..512 214 31.4 Plus
CG5808-PA 653 CG5808-PA 372..617 288..512 213 30.5 Plus
CG6621-PB 868 CG6621-PB 664..866 268..451 212 36.9 Plus
CG6621-PA 872 CG6621-PA 668..870 268..451 212 36.9 Plus
CG7971-PG 1062 CG7971-PG 420..665 284..508 210 31.3 Plus
CG7971-PA 1062 CG7971-PA 420..665 284..508 210 31.3 Plus
CG7971-PC 1107 CG7971-PC 420..665 284..508 210 31.3 Plus
CG7971-PF 1655 CG7971-PF 645..890 284..508 210 31.3 Plus
CG6066-PA 463 CG6066-PA 2..273 284..510 210 32.5 Plus
Xe7-PA 783 CG2179-PA 541..783 284..501 210 32.8 Plus
CG9915-PC 820 CG9915-PC 349..558 285..483 209 36.3 Plus
CG9915-PB 820 CG9915-PB 349..558 285..483 209 36.3 Plus
Atu-PA 725 CG1433-PA 10..258 289..512 208 34.9 Plus
BOD1-PC 1109 CG5514-PC 549..787 244..513 207 29.5 Plus
BOD1-PA 1109 CG5514-PA 549..787 244..513 207 29.5 Plus
BOD1-PD 1150 CG5514-PD 549..787 244..513 207 29.5 Plus
BOD1-PB 1150 CG5514-PB 549..787 244..513 207 29.5 Plus
BOD1-PE 1151 CG5514-PE 549..787 244..513 207 29.5 Plus
B52-PN 350 CG10851-PN 205..341 280..426 206 47.4 Plus
B52-PC 350 CG10851-PC 205..341 280..426 206 47.4 Plus
B52-PA 350 CG10851-PA 205..341 280..426 206 47.4 Plus
B52-PO 355 CG10851-PO 210..346 280..426 206 47.4 Plus
B52-PM 355 CG10851-PM 210..346 280..426 206 47.4 Plus
CG7971-PG 1062 CG7971-PG 489..689 283..499 206 30.6 Plus
CG7971-PA 1062 CG7971-PA 489..689 283..499 206 30.6 Plus
CG7971-PC 1107 CG7971-PC 489..689 283..499 206 30.6 Plus
CG7971-PF 1655 CG7971-PF 714..914 283..499 206 30.6 Plus
CG6621-PB 868 CG6621-PB 676..837 324..500 205 41.3 Plus
CG6621-PA 872 CG6621-PA 680..841 324..500 205 41.3 Plus
CG5808-PA 653 CG5808-PA 435..648 281..497 204 32.3 Plus
CG7971-PG 1062 CG7971-PG 245..500 281..496 203 28 Plus
CG7971-PG 1062 CG7971-PG 543..801 283..504 203 28.8 Plus
CG7971-PA 1062 CG7971-PA 245..500 281..496 203 28 Plus
CG7971-PA 1062 CG7971-PA 543..801 283..504 203 28.8 Plus
CG7971-PC 1107 CG7971-PC 245..500 281..496 203 28 Plus
CG7971-PC 1107 CG7971-PC 543..801 283..504 203 28.8 Plus
CG7971-PF 1655 CG7971-PF 470..725 281..496 203 28 Plus
CG7971-PF 1655 CG7971-PF 768..1026 283..504 203 28.8 Plus
SRm160-PA 954 CG11274-PA 129..347 278..496 203 33.2 Plus
CG7971-PG 1062 CG7971-PG 519..789 282..513 202 30 Plus
CG7971-PA 1062 CG7971-PA 519..789 282..513 202 30 Plus
CG7971-PC 1107 CG7971-PC 519..789 282..513 202 30 Plus
CG7971-PF 1655 CG7971-PF 744..1014 282..513 202 30 Plus
CG6695-PB 715 CG6695-PB 410..540 336..474 201 44.3 Plus
CG6695-PA 961 CG6695-PA 410..540 336..474 201 44.3 Plus
RnpS1-PA 374 CG16788-PA 21..220 279..476 200 33.5 Plus
Atu-PA 725 CG1433-PA 65..294 280..509 199 32.7 Plus
B52-PN 350 CG10851-PN 179..331 313..469 198 41.2 Plus
B52-PC 350 CG10851-PC 179..331 313..469 198 41.2 Plus
B52-PA 350 CG10851-PA 179..331 313..469 198 41.2 Plus
B52-PO 355 CG10851-PO 184..336 313..469 198 41.2 Plus
B52-PM 355 CG10851-PM 184..336 313..469 198 41.2 Plus
Caper-PB 594 CG11266-PB 59..254 277..471 198 34.6 Plus
Caper-PA 594 CG11266-PA 59..254 277..471 198 34.6 Plus
CG32452-PC 574 CG32452-PC 219..446 284..500 197 37 Plus
CG32452-PB 574 CG32452-PB 219..446 284..500 197 37 Plus
CG32452-PA 574 CG32452-PA 219..446 284..500 197 37 Plus
Ctr9-PA 1150 CG2469-PA 931..1150 280..503 195 32.1 Plus
Ctr9-PB 1150 CG2469-PB 931..1150 280..503 195 32.1 Plus
Xe7-PA 783 CG2179-PA 578..778 277..463 195 36.8 Plus
B52-PB 329 CG10851-PB 192..326 310..459 194 41.3 Plus
Xe7-PD 777 CG2179-PD 578..772 277..463 194 38.6 Plus
SF1-PC 323 CG5836-PC 2..195 238..452 193 33.9 Plus
SF1-PB 347 CG5836-PB 2..195 238..452 193 33.9 Plus
SF1-PA 787 CG5836-PA 2..195 238..452 193 33.9 Plus
B52-PB 329 CG10851-PB 191..320 295..426 192 44.9 Plus
BOD1-PC 1109 CG5514-PC 613..800 284..452 190 31.1 Plus
BOD1-PA 1109 CG5514-PA 613..800 284..452 190 31.1 Plus
BOD1-PD 1150 CG5514-PD 613..800 284..452 190 31.1 Plus
BOD1-PB 1150 CG5514-PB 613..800 284..452 190 31.1 Plus
BOD1-PE 1151 CG5514-PE 613..800 284..452 190 31.1 Plus
PNUTS-PA 628 CG33526-PA 288..499 282..504 190 30.1 Plus
PNUTS-PB 628 CG33526-PB 288..499 282..504 190 30.1 Plus
PNUTS-PE 1135 CG33526-PE 288..499 282..504 190 30.1 Plus
PNUTS-PD 1135 CG33526-PD 288..499 282..504 190 30.1 Plus
CG6695-PA 961 CG6695-PA 806..946 279..407 188 40.7 Plus
CG5808-PA 653 CG5808-PA 347..577 281..504 187 28.2 Plus
B52-PB 329 CG10851-PB 201..310 277..389 186 49.6 Plus
Xe7-PD 777 CG2179-PD 541..777 284..501 186 31.4 Plus
CG31211-PA 874 CG31211-PA 671..870 263..435 186 32 Plus
CG31211-PB 893 CG31211-PB 690..889 263..435 186 32 Plus
CG7971-PG 1062 CG7971-PG 284..533 280..497 185 27.3 Plus
CG7971-PA 1062 CG7971-PA 284..533 280..497 185 27.3 Plus
CG7971-PC 1107 CG7971-PC 284..533 280..497 185 27.3 Plus
CG7971-PF 1655 CG7971-PF 509..758 280..497 185 27.3 Plus
SRm160-PA 954 CG11274-PA 270..424 284..435 183 36.9 Plus
CG7971-PG 1062 CG7971-PG 225..465 282..512 182 28.6 Plus
CG7971-PA 1062 CG7971-PA 225..465 282..512 182 28.6 Plus
CG7971-PC 1107 CG7971-PC 225..465 282..512 182 28.6 Plus
CG7971-PF 1655 CG7971-PF 450..690 282..512 182 28.6 Plus
Top1-PD 970 CG6146-PD 44..201 287..436 182 32.7 Plus
Top1-PC 974 CG6146-PC 48..205 287..436 182 32.7 Plus
Top1-PA 974 CG6146-PA 48..205 287..436 182 32.7 Plus
CG12877-PC 991 CG12877-PC 127..331 243..452 182 29.8 Plus
CG9915-PC 820 CG9915-PC 56..258 305..512 181 31.9 Plus
CG9915-PB 820 CG9915-PB 56..258 305..512 181 31.9 Plus
Cwc25-PA 521 CG2843-PA 272..480 279..494 181 27.5 Plus
B52-PN 350 CG10851-PN 187..324 330..496 180 38.9 Plus
B52-PC 350 CG10851-PC 187..324 330..496 180 38.9 Plus
B52-PA 350 CG10851-PA 187..324 330..496 180 38.9 Plus
B52-PO 355 CG10851-PO 192..329 330..496 180 38.9 Plus
B52-PM 355 CG10851-PM 192..329 330..496 180 38.9 Plus
CG6066-PA 463 CG6066-PA 36..314 283..505 180 27.3 Plus
SRm160-PA 954 CG11274-PA 205..424 269..470 180 29.9 Plus
PNUTS-PA 628 CG33526-PA 279..462 301..501 180 29.4 Plus
PNUTS-PB 628 CG33526-PB 279..462 301..501 180 29.4 Plus
PNUTS-PE 1135 CG33526-PE 279..462 301..501 180 29.4 Plus
PNUTS-PD 1135 CG33526-PD 279..462 301..501 180 29.4 Plus
Ctr9-PA 1150 CG2469-PA 813..1148 211..513 177 25.5 Plus
Ctr9-PB 1150 CG2469-PB 813..1148 211..513 177 25.5 Plus
CG3918-PA 321 CG3918-PA 86..268 306..497 177 31.3 Plus
Atu-PA 725 CG1433-PA 128..359 290..499 176 28.4 Plus
Top1-PD 970 CG6146-PD 51..201 286..448 176 31.7 Plus
Top1-PC 974 CG6146-PC 55..205 286..448 176 31.7 Plus
Top1-PA 974 CG6146-PA 55..205 286..448 176 31.7 Plus
B52-PB 329 CG10851-PB 210..318 280..386 175 51.8 Plus
CG7971-PG 1062 CG7971-PG 884..1059 251..428 174 34.2 Plus
CG7971-PA 1062 CG7971-PA 884..1059 251..428 174 34.2 Plus
Top1-PD 970 CG6146-PD 33..198 335..505 174 31 Plus
Top1-PC 974 CG6146-PC 37..202 335..505 174 31 Plus
Top1-PA 974 CG6146-PA 37..202 335..505 174 31 Plus
CG5808-PA 653 CG5808-PA 452..653 280..467 171 30.2 Plus
Caper-PB 594 CG11266-PB 61..235 303..505 171 30.7 Plus
Caper-PA 594 CG11266-PA 61..235 303..505 171 30.7 Plus
RnpS1-PA 374 CG16788-PA 3..185 310..496 170 28.9 Plus
RnpS1-PA 374 CG16788-PA 34..221 326..501 170 33.5 Plus
B52-PN 350 CG10851-PN 117..347 166..376 167 30.3 Plus
B52-PC 350 CG10851-PC 117..347 166..376 167 30.3 Plus
B52-PA 350 CG10851-PA 117..347 166..376 167 30.3 Plus
B52-PO 355 CG10851-PO 122..352 166..376 167 30.3 Plus
B52-PM 355 CG10851-PM 122..352 166..376 167 30.3 Plus
SRm160-PA 954 CG11274-PA 135..317 319..508 166 34.2 Plus
CG6695-PA 961 CG6695-PA 730..949 281..501 164 26.8 Plus
Cwc25-PA 521 CG2843-PA 161..420 283..513 164 24.1 Plus
Top1-PD 970 CG6146-PD 37..203 326..502 164 33.3 Plus
Top1-PC 974 CG6146-PC 41..207 326..502 164 33.3 Plus
Top1-PA 974 CG6146-PA 41..207 326..502 164 33.3 Plus
B52-PB 329 CG10851-PB 184..310 313..469 162 40.8 Plus
Caper-PB 594 CG11266-PB 48..239 280..478 162 26.6 Plus
Caper-PA 594 CG11266-PA 48..239 280..478 162 26.6 Plus
Cwc25-PA 521 CG2843-PA 213..415 281..496 162 26.8 Plus
CG3918-PA 321 CG3918-PA 101..299 279..467 161 27.7 Plus
CG7971-PF 1655 CG7971-PF 1501..1590 312..415 159 45.2 Plus
CG32452-PC 574 CG32452-PC 265..455 284..459 158 35.8 Plus
CG32452-PB 574 CG32452-PB 265..455 284..459 158 35.8 Plus
CG32452-PA 574 CG32452-PA 265..455 284..459 158 35.8 Plus
Cwc25-PA 521 CG2843-PA 264..474 297..508 157 28.3 Plus
Caper-PB 594 CG11266-PB 27..217 306..513 156 28.4 Plus
Caper-PA 594 CG11266-PA 27..217 306..513 156 28.4 Plus
B52-PB 329 CG10851-PB 101..310 282..495 154 32.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 10:30:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17720-PA 513 GI17720-PA 1..283 1..283 1510 97.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 10:30:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18941-PA 515 GL18941-PA 1..515 1..513 1567 88.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 10:30:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18291-PA 515 GA18291-PA 1..515 1..513 1577 88.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 10:30:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17744-PA 512 GM17744-PA 1..512 1..513 2582 98.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 10:30:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23635-PA 512 GD23635-PA 1..512 1..513 2615 99.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 10:30:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17548-PA 508 GJ17548-PA 1..283 1..283 1511 98.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 10:30:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18279-PA 534 GK18279-PA 1..283 1..283 1497 97.9 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 10:30:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18876-PA 513 GE18876-PA 1..513 1..513 2603 98.6 Plus

LD29830.hyp Sequence

Translation from 101 to 1642

> LD29830.hyp
MAGGNTPRVIQVTNIAPQATKDQMQTLFGNIGKIEEIRLYPTIRDVSCPV
QSRICYVKYTDTTSVPVAQHLTNTVFIDRALIVIPVLAIPEEYRALEMLK
NGTIVPGLQKPDSKLPPEVINRIEGQLPQQVIKTYDPKLVEFNLPEYPAL
PSFYDARKIEEIRRTIIVCDVKNEWRLDDLMECFQRAGEVKYARWAEKDN
KTYCMIEFCEQTSIIHALRMQGQEFKGGHLSVYHSTYSITKPEAKSNEAA
QAEIEEAMTIVKEAQSMISAAIDPVIGMLAKDKRRRSRSRSRSRDRRTSR
SRSHRSTSRRRSRRSGSRERRSVSRSRRSRSRGKHSSRSRSKRSRSRHRR
SSSRSRRSRSRGGKHSRSSRSRGKRSRSRHRRSTSRSRSSRSHGTGGGGS
GNGKRSRSRERSKKSHRSEKHSSRSPRSRSKRSSPSPPPATGSKSRSSRS
KDPVIVSAKSSRRRDRSRTPETRKLKSISEDTEVKSSRSSADSKSRKSVS
VEKSDNMDISNSP*

LD29830.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 16:35:31
Subject Length Description Subject Range Query Range Score Percent Strand
Srp54-PA 513 CG4602-PA 1..513 1..513 2586 100 Plus
CG9915-PC 820 CG9915-PC 240..522 285..513 291 41 Plus
CG9915-PB 820 CG9915-PB 240..522 285..513 291 41 Plus
CG9915-PC 820 CG9915-PC 219..440 285..500 284 48.1 Plus
CG9915-PB 820 CG9915-PB 219..440 285..500 284 48.1 Plus
CG9915-PC 820 CG9915-PC 160..388 285..500 283 44.3 Plus
CG9915-PB 820 CG9915-PB 160..388 285..500 283 44.3 Plus
CG9915-PC 820 CG9915-PC 16..316 236..495 282 38.5 Plus
CG9915-PB 820 CG9915-PB 16..316 236..495 282 38.5 Plus
CG9915-PC 820 CG9915-PC 175..404 288..500 278 43.7 Plus
CG9915-PB 820 CG9915-PB 175..404 288..500 278 43.7 Plus
CG9915-PC 820 CG9915-PC 191..416 285..500 273 44.3 Plus
CG9915-PB 820 CG9915-PB 191..416 285..500 273 44.3 Plus
CG9915-PC 820 CG9915-PC 112..365 285..512 270 40.4 Plus
CG9915-PB 820 CG9915-PB 112..365 285..512 270 40.4 Plus
CG6695-PB 715 CG6695-PB 360..554 236..441 247 43.8 Plus
CG6695-PA 961 CG6695-PA 360..554 236..441 247 43.8 Plus
CG9915-PC 820 CG9915-PC 319..525 283..493 244 42.2 Plus
CG9915-PB 820 CG9915-PB 319..525 283..493 244 42.2 Plus
CG9915-PC 820 CG9915-PC 349..558 285..483 209 36.3 Plus
CG9915-PB 820 CG9915-PB 349..558 285..483 209 36.3 Plus
CG6695-PB 715 CG6695-PB 410..540 336..474 201 44.3 Plus
CG9915-PC 820 CG9915-PC 56..258 305..512 181 31.9 Plus
CG9915-PB 820 CG9915-PB 56..258 305..512 181 31.9 Plus