BDGP Sequence Production Resources |
Search the DGRC for LD29875
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 298 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5742-RA |
Protein status: | LD29875.pep: gold |
Preliminary Size: | 3205 |
Sequenced Size: | 2936 |
Gene | Date | Evidence |
---|---|---|
CG5742 | 2001-01-01 | Release 2 assignment |
CG5742 | 2001-09-19 | Blastp of sequenced clone |
CG5742 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5742 | 2008-04-29 | Release 5.5 accounting |
CG5742 | 2008-08-15 | Release 5.9 accounting |
CG5742 | 2008-12-18 | 5.12 accounting |
2936 bp (2936 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058606
> LD29875.complete CCAGATAAACTAAAAAAATCGAATTGATTTATTTAATTCCACGGAAGACG CGACGTTGACTGAAAAGCTAAGACATGTCCAAAGAAAAGGAGGACGAGTG CGACAAGCACAAACAGCAGGCGACGGCGGACGCCAAGTCCACGTCGAGCG AGGATTCCGATGAGTACCAATCGGCCGGTGAGGGCGAGGATGGAGACGGC GATGGTGACGGTGATTCCCCAGCGGAGCGCCCGCCTGACAAAACCAGCCC CACGGTCGCCGTTGCGCCCACAGCAAAGGCAGCATCGCCACTGCCCACTG TGAAGCCAGCATCCGAGGCCCTGGACTTTCCTATGCACCGGAGTGTTTTC GAGGACGACATCAAGTCGCTGCAGCGACGACTTCTATTGAGCACGGCCCA AGACGAAGTGGGTAGAAAGGATAAGCACGGCAATACGCCACTCCATCTGG CCGTAATGCTGGGCAGAAAGCACGCTGTCCGTTTGCTTCTGGCCCAAAAC GCCCCCGTAAAGATCAAGAACAATGAGGGCTGGTCCCCGCTGTCCGAGGC CATTAGCTACGGCGACCGCCAGACAATCACCCAGGTGCTGCGAATGCTAA AGCTGCAGTCCCGCGAACACATGGAGAGTCGGCGCGAGAAGCTGGTCAAT GCGCTGCGCCAGATGCAGGACTTCTACATGGAATTCAAGTGGGATTTTCA ATCATGGCTGCCACTGGTTTCCCGCATCCTGCCCTCGGACATCTGCCGGC TTTACAAGTCGGGCGCCTCCATTCGTTTGGACACCACACTGGTGGACTTC AATGATATGCGTTGGGAGCGAGGGGACATATCGTTCTTGTTTAGAGGTGA GGCGCCGGCAAGGGAATCGCTGGTTCTGTTGGACAATGAGCAGGAATGCT TTCAGCGGCTGCGATACGAGGAATCAGACATGGAGGATGAGGTGGATGTG CTCATGTCGACCGATATACTGGCCACCCAGATGTCCACCAAGACGATTCA GTTCGCACGGGCGCAACGCGGATGGATATTCCGCGCCAATCGCAAGGAGC TCATTGGGGGCCAATACCAGTGCGAAATTTACACCATCCAGGGCTTAATC CTGAAGCAGCGTAAGAGGCGGGAACACCTGTCACACGAGGATCTACAAAA GAACCGCGCCATTGTCGAGACTATTACCAAGGGTGCCAGCCAGCAGCCGG ATACGCGTCGCTCCAGTCTAGGCAGCCAGCACACGGCCACGCCGCCGGAG ACCAATACACCAACGGCTCCGAATGGCATCTCACTGCCGGAGCTGCCGCG TCGCAGCTCGCTGCAGGCCCCGCCGCCTCCCACAGTCACCTGGCGACAGT ATCTCGATGCGGAGGTCGGTAAGTGCCCGCAACTGGGTCGGACACCCGTG CACAAGCAATCCAACAAGACGCTGCGAGCAACGGTAGCCATGAGCAAGGA CTTTCCACTTAGCGTGGATATGCTGCTGGACGTTCTGGAAGTCGTGGCAC CCCTAAAACACATCAACAAGCTGCGCGAATTCGTCACGCTGAAGCTACCG ACGGGCTTTCCCGTGAAGATTGAGATACCCGTACTGCACACGGTGACCGC CAAGGTGACGTTCCAAAAATTCGAGTTCCGCGACAACATCCCCGCCAAGA TGTTCGAGGTGCCATCGCACTATTGGGAGGATGTGCGTCGCTTTCAGGAC TTATGACCAGGCGACGGAGAAGCCGCGCCAAAGGCCAAAGCAGCAACCGG CGGACCGACTGGAGCAGCGACTGGCGTTCATGTCGACTTGAATCGCAATG CGTCCTCGCCCTCCATTGCGGAGTTCGATTGATGAGGCGTCTACCGCGAC ACACGCCTCTCATTCTGCCTGTCCGCCTGTCCCACACATTTCATGTCGCG TTTAGTGATCACTCCAGCAAAAGTCGGAGGATACAGCTCGAACGCGGGCG GCTTGTTTATGTATGTATGCTTAAGAGGAAAACACCCACACACAAAATTG CAATTTTCACCATGAGTGAATCCCATACTCTCCCGGTCCAAATCCAAATT GGACGCTCTGAAAATTGCAATTTTACATTTACGTTTTGTTATGTACTGTA TTTGTTTTTAGTCGCCTTCGCAAGAAGGGTCATTACTTAGTAGTATTTAT TATGCACAGGCTCGTCATTTTTAACAGCCCGAGTGAATCACATCAACTTC AAATGGTGTTTTCAGATTGCCACCCTAATTGGTGGGGTGCGGTCCCAAAA CAGCTGCTCCACTGGCGAGGAATCCAGAAGATCACTTTCCCAAATTGCCT TTCGTATCTGCCGATAATCGCGGCGGTACGAAGGTAAAACTAAATGTCCA ATCTGCAGAATTGCTTGCTGATAGCCACGTTGACAGCAGCAATTTGCTAA GTTTTTAGTTTGTAAGTGATTAGATGTTGTCCAATATCCGATCGTTTCGC AAAACGTTTATCATTTTATTTATGTCCATACCCCCTTTCCGTGTTTAGTG CAATTTCATACATAGTTTTAAGGTCAACTGGGAAAGAAGACAGATGTTTG TTTTCGAAATCGAAAAAAAAAGAATCCACGTAACCGCTTGAAGAACGTTC ATCAAACAATTGCGTTCTTCTTCTACTTAGGCTATGTGTACTAGAGAATC GATCGCAAAACCATTTCCATTTCGCCTTTCCTCGCAATAGTCTCAAGTAT TTAGAAGTGCGCAAAACTGAGACCAGCAGCTTCACAAATCAATTATAAAT AAATATTTATACATACGCATGTAACCAAGTATTTATTTAGTTCCATCTTA GCCAATTATTTATACTGCAAAGAGCGTCTGTACTTGCTTTGTATTTGTTA ATCAACAAAACCAGCTAGCACCGATTTAGTTTCGGTTCGCATTGCTTTGC TGTGATTTTGCCCTCTTTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5742-RA | 2924 | CG5742-RA | 7..2924 | 1..2918 | 14590 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 14035617..14038535 | 2918..1 | 14470 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 18148451..18151381 | 2931..1 | 14640 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 18149650..18152580 | 2931..1 | 14640 | 99.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 14035617..14038535 | 1..2918 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RA | 1..1632 | 75..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RA | 1..1632 | 75..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RC | 1..1758 | 75..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RA | 1..1632 | 75..1706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RC | 1..1758 | 75..1832 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RA | 7..2924 | 1..2918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RA | 7..2924 | 1..2918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RA | 30..2947 | 1..2918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RA | 7..2924 | 1..2918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5742-RA | 30..2947 | 1..2918 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18148464..18151381 | 1..2918 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18148464..18151381 | 1..2918 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18148464..18151381 | 1..2918 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 14035969..14038886 | 1..2918 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 18149663..18152580 | 1..2918 | 100 | Minus |
Translation from 74 to 1705
> LD29875.pep MSKEKEDECDKHKQQATADAKSTSSEDSDEYQSAGEGEDGDGDGDGDSPA ERPPDKTSPTVAVAPTAKAASPLPTVKPASEALDFPMHRSVFEDDIKSLQ RRLLLSTAQDEVGRKDKHGNTPLHLAVMLGRKHAVRLLLAQNAPVKIKNN EGWSPLSEAISYGDRQTITQVLRMLKLQSREHMESRREKLVNALRQMQDF YMEFKWDFQSWLPLVSRILPSDICRLYKSGASIRLDTTLVDFNDMRWERG DISFLFRGEAPARESLVLLDNEQECFQRLRYEESDMEDEVDVLMSTDILA TQMSTKTIQFARAQRGWIFRANRKELIGGQYQCEIYTIQGLILKQRKRRE HLSHEDLQKNRAIVETITKGASQQPDTRRSSLGSQHTATPPETNTPTAPN GISLPELPRRSSLQAPPPPTVTWRQYLDAEVGKCPQLGRTPVHKQSNKTL RATVAMSKDFPLSVDMLLDVLEVVAPLKHINKLREFVTLKLPTGFPVKIE IPVLHTVTAKVTFQKFEFRDNIPAKMFEVPSHYWEDVRRFQDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12280-PA | 542 | GF12280-PA | 1..542 | 1..543 | 2533 | 88 | Plus |
Dana\GF13381-PA | 642 | GF13381-PA | 10..461 | 84..513 | 489 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20989-PA | 541 | GG20989-PA | 1..541 | 1..543 | 2821 | 96.9 | Plus |
Dere\GG20921-PA | 637 | GG20921-PA | 10..505 | 84..539 | 512 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20848-PA | 531 | GH20848-PA | 1..531 | 1..543 | 2155 | 76.1 | Plus |
Dgri\GH23148-PA | 649 | GH23148-PA | 9..503 | 83..533 | 505 | 27.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5742-PC | 585 | CG5742-PC | 1..543 | 1..543 | 2816 | 100 | Plus |
CG5742-PB | 543 | CG5742-PB | 1..543 | 1..543 | 2816 | 100 | Plus |
CG5742-PA | 543 | CG5742-PA | 1..543 | 1..543 | 2816 | 100 | Plus |
CG15118-PE | 630 | CG15118-PE | 10..505 | 84..539 | 495 | 27.1 | Plus |
CG15118-PB | 637 | CG15118-PB | 10..505 | 84..539 | 495 | 27.1 | Plus |
CG15118-PA | 637 | CG15118-PA | 10..505 | 84..539 | 495 | 27.1 | Plus |
CG15118-PD | 592 | CG15118-PD | 2..460 | 125..539 | 447 | 27.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20952-PA | 520 | GI20952-PA | 1..520 | 1..543 | 2090 | 76 | Plus |
Dmoj\GI20625-PA | 640 | GI20625-PA | 9..461 | 83..513 | 525 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10514-PA | 539 | GL10514-PA | 17..539 | 18..543 | 2175 | 78.3 | Plus |
Dper\GL11759-PA | 581 | GL11759-PA | 10..443 | 84..533 | 433 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19099-PA | 539 | GA19099-PA | 17..539 | 18..543 | 2189 | 78.3 | Plus |
Dpse\GA13506-PA | 636 | GA13506-PA | 10..498 | 84..533 | 519 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19924-PA | 543 | GM19924-PA | 1..543 | 1..543 | 2865 | 98.2 | Plus |
Dsec\GM19848-PA | 637 | GM19848-PA | 10..505 | 84..539 | 499 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25413-PA | 543 | GD25413-PA | 1..543 | 1..543 | 2878 | 98.5 | Plus |
Dsim\GD25337-PA | 654 | GD25337-PA | 12..522 | 70..539 | 511 | 27.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20674-PA | 514 | GJ20674-PA | 1..514 | 1..543 | 2117 | 75 | Plus |
Dvir\GJ19668-PA | 641 | GJ19668-PA | 10..499 | 84..533 | 473 | 26.1 | Plus |
Translation from 74 to 1705
> LD29875.hyp MSKEKEDECDKHKQQATADAKSTSSEDSDEYQSAGEGEDGDGDGDGDSPA ERPPDKTSPTVAVAPTAKAASPLPTVKPASEALDFPMHRSVFEDDIKSLQ RRLLLSTAQDEVGRKDKHGNTPLHLAVMLGRKHAVRLLLAQNAPVKIKNN EGWSPLSEAISYGDRQTITQVLRMLKLQSREHMESRREKLVNALRQMQDF YMEFKWDFQSWLPLVSRILPSDICRLYKSGASIRLDTTLVDFNDMRWERG DISFLFRGEAPARESLVLLDNEQECFQRLRYEESDMEDEVDVLMSTDILA TQMSTKTIQFARAQRGWIFRANRKELIGGQYQCEIYTIQGLILKQRKRRE HLSHEDLQKNRAIVETITKGASQQPDTRRSSLGSQHTATPPETNTPTAPN GISLPELPRRSSLQAPPPPTVTWRQYLDAEVGKCPQLGRTPVHKQSNKTL RATVAMSKDFPLSVDMLLDVLEVVAPLKHINKLREFVTLKLPTGFPVKIE IPVLHTVTAKVTFQKFEFRDNIPAKMFEVPSHYWEDVRRFQDL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5742-PC | 585 | CG5742-PC | 1..543 | 1..543 | 2816 | 100 | Plus |
CG5742-PB | 543 | CG5742-PB | 1..543 | 1..543 | 2816 | 100 | Plus |
CG5742-PA | 543 | CG5742-PA | 1..543 | 1..543 | 2816 | 100 | Plus |
CG15118-PE | 630 | CG15118-PE | 10..505 | 84..539 | 495 | 27.1 | Plus |
CG15118-PB | 637 | CG15118-PB | 10..505 | 84..539 | 495 | 27.1 | Plus |