BDGP Sequence Production Resources |
Search the DGRC for LD29885
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 298 |
Well: | 85 |
Vector: | pOT2 |
Associated Gene/Transcript | epsilonCOP-RA |
Protein status: | LD29885.pep: gold |
Preliminary Size: | 1318 |
Sequenced Size: | 1100 |
Gene | Date | Evidence |
---|---|---|
CG9543 | 2000-02-14 | Blastp of sequenced clone |
CG9543 | 2001-01-01 | Release 2 assignment |
CG9543 | 2003-01-01 | Sim4 clustering to Release 3 |
epsilonCOP | 2008-04-29 | Release 5.5 accounting |
epsilonCOP | 2008-08-15 | Release 5.9 accounting |
epsilonCOP | 2008-12-18 | 5.12 accounting |
1100 bp (1100 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145691
> LD29885.complete CGATAAGTTTACACAAATAAGCCAACTCAGCCGAAAAGAATTCGGTTTTT CCATCTAATTCAATAATATTTACGAAAATGAGCCGACAGCAGAATGAGGA GGACACCAACTCGGTGCTATTCGATGCCCGCAACGAGTACTACATCGGTA ACTTCATGGGCTCGATCAACTTCGTGCTGCCGGAGCAGGGTACCGCGGGT CCGGAGCTCCTGTCCTACATGTACCTATCTTACTTGGCCATCGATTCCGG GCGCATCGTGGCCTCGGACATCAAGGAGGGAAACTCCACGCCACTGCAGG CCTTGCGTCTGGTGCACGAAGCCTTTGAGCAGCCTTCGAGGACGGAGGAG CTGCTGGAGAAACTCACGGACAAGGTGGCCGGAGAGGAGGATGAGACCAA CATCTGGCACCTTGCAACCGCCATCGTCTACTGCCACGACGGGCAGTTCG AGAACGCACTGAAGATCCTGCACGGCTCCACCAATCTGGAGTCGATGGCT CTGTCGGTCCAGTGCCTGCTGCGTCTGCAGCGCGTGGACCTGGCCAAGCA GCTGGTGGCCAAGATGCAGGAGATCAGCGACGATGCTACGCTGACTCAGC TCGCTCAGGCGTGGGTGGCCCTCGCCCAGGGAACGGAACAGATGCAGGAC GCCTTTCACATCTACCAGGAGTTCTGTGAAAAGTTCAAGCCAACTCCGGC GCTGCTGAACGGCCAAGCGGTCGTTCATTTGGGTCTGGAGCGGTACGAGG AGGCAGATTCCGTTCTGCGTGAATCTCTGCTGAAGAAGCACAACGACTAC GACACGCTGATCAATCTGATGGTTCATGCCCATCTTACGGGCAAGCCGAC AGAGGCGATCACCCGGAATCTAGAACAGCTGAGGCAGTTCTATCCCAAGA GCGACTTTGTCACCGATCTAGACAAGAAGTCAGCGGAGTTCGACCGCCTG TGCCTGCAGTACGACGTCGAGGGCGGTGAAAAACTGCTCGCCGTCTAGAT ATAAGAAAAAATTCCAAATATCCAAATTAACAAAACCTTTTGTTCATGTA TTAAACTACAATAAAAATTTATTAGAAATGTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 6488096..6489176 | 1..1081 | 5270 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6489114..6490195 | 1..1082 | 5410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 6489114..6490195 | 1..1082 | 5410 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 6488096..6489176 | 1..1081 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 1..921 | 78..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 1..921 | 78..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 1..921 | 78..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 1..921 | 78..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 1..921 | 78..998 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 23..1103 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 23..1103 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 25..1105 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 23..1103 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsilonCOP-RA | 25..1105 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6489114..6490194 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6489114..6490194 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6489114..6490194 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 6489114..6490194 | 1..1081 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 6489114..6490194 | 1..1081 | 100 | Plus |
Translation from 77 to 997
> LD29885.pep MSRQQNEEDTNSVLFDARNEYYIGNFMGSINFVLPEQGTAGPELLSYMYL SYLAIDSGRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKV AGEEDETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRL QRVDLAKQLVAKMQEISDDATLTQLAQAWVALAQGTEQMQDAFHIYQEFC EKFKPTPALLNGQAVVHLGLERYEEADSVLRESLLKKHNDYDTLINLMVH AHLTGKPTEAITRNLEQLRQFYPKSDFVTDLDKKSAEFDRLCLQYDVEGG EKLLAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14166-PA | 306 | GF14166-PA | 1..306 | 1..306 | 1574 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10415-PA | 306 | GG10415-PA | 1..306 | 1..306 | 1630 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13650-PA | 306 | GH13650-PA | 1..306 | 1..306 | 1431 | 87.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
epsilonCOP-PA | 306 | CG9543-PA | 1..306 | 1..306 | 1567 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13628-PA | 307 | GI13628-PA | 1..307 | 1..306 | 1438 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25672-PA | 307 | GL25672-PA | 1..307 | 1..306 | 1505 | 91.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21869-PA | 307 | GA21869-PA | 1..307 | 1..306 | 1509 | 91.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18632-PA | 306 | GM18632-PA | 1..306 | 1..306 | 1629 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23412-PA | 306 | GD23412-PA | 1..306 | 1..306 | 1632 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18334-PA | 306 | GJ18334-PA | 1..306 | 1..306 | 1453 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18724-PA | 307 | GK18724-PA | 1..307 | 1..306 | 1426 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13901-PA | 306 | GE13901-PA | 1..306 | 1..306 | 1625 | 99 | Plus |
Translation from 77 to 997
> LD29885.hyp MSRQQNEEDTNSVLFDARNEYYIGNFMGSINFVLPEQGTAGPELLSYMYL SYLAIDSGRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKV AGEEDETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRL QRVDLAKQLVAKMQEISDDATLTQLAQAWVALAQGTEQMQDAFHIYQEFC EKFKPTPALLNGQAVVHLGLERYEEADSVLRESLLKKHNDYDTLINLMVH AHLTGKPTEAITRNLEQLRQFYPKSDFVTDLDKKSAEFDRLCLQYDVEGG EKLLAV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
epsilonCOP-PA | 306 | CG9543-PA | 1..306 | 1..306 | 1567 | 100 | Plus |