BDGP Sequence Production Resources |
Search the DGRC for LD29918
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 299 |
Well: | 18 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3021-RA |
Protein status: | LD29918.pep: gold |
Preliminary Size: | 1539 |
Sequenced Size: | 1363 |
Gene | Date | Evidence |
---|---|---|
CG3021 | 2001-01-01 | Release 2 assignment |
CG3021 | 2001-07-04 | Blastp of sequenced clone |
CG3021 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3021 | 2008-04-29 | Release 5.5 accounting |
CG3021 | 2008-08-15 | Release 5.9 accounting |
CG3021 | 2008-12-18 | 5.12 accounting |
1363 bp (1363 high quality bases) assembled on 2001-07-04
GenBank Submission: AY051773
> LD29918.complete ATAACTTTGAAATTATTGCTTTGCCAACACCGCCCAATGATTCGCAACGT AGTGGTGGGCGTGTCGGGCGGCGTGGACAGCGCCGTTTCCGCCCACCTGC TGGCGGAGCAAGGATTCAAGGTGCTGGGTGTGTTTATGCGCAACTGGGAT GAGGCGGACGAAGTGGGTCGCTGCAGTGGGGAGGCGGATCTGAAGGACGC CGAGTGGGCGTGCCGGCAGCTCGGCGTGGAGCTGCGTCAGGTGAACTATG TGCGCGAGTACTGGACGGCGGTGTTCAGCCAGTTTCTGGACGATTACCAA ATGGGCTTGACACCAAATCCGGACATCCTGTGCAATCGCCACATTAAGTT TGACCTCTTTCACAAGCACGCCTTGGAAAATCTCGGCTACGATGCCGTGG CCACGGGTCACTACGCCCGGAATAGTCTGGGCAACTACCTGGAGGGGATT GCCTCCAACAACGACGCCCGCTTGCTAATACCCGCCGATACGTTCAAGGA CCAGACATTCTTTTTGGCAGGTATTTCCCGAAAGGCTCTGCAACGCACGA TGTTCCCTTTGGGAGACTTCCAGAAGAGCCAGGTCAAGGACTTGGCCAAG AAGATTGGCTTCCAGCGACTGGCCAAAAAGAAGGAAAGCACTGGCATTTG TTTCGTTGGCAAACGCAACTTCAAGGACTTCATACAGGAGTACATCACTT CCAAACGTGGTCCCTTCCTAGACATCGACAGTGGAGCCGTTGTCGGCCAC CACGAGGGCATCCATCAATGGACTGTGGGCCAGCGGTGCCGTCTGAGCTC ATTCCTTCAGCCCTATTTTGTGGCCAGGAAAGAGGCCGCAAGCAATACCA TCTATGTGGCATCTGGCCACAACCATCCCGCCCTTCTCAGCACCCACATA GCCGTCGATCCGCCCAACTGGCTGTGTTCCAAGTCCCAACAGATTCTTTC GGACACTGGCAGCTTGAGGTGTCGCTTTCGATTCCAGCACACCAAACCAT TGGTGGACTGTCAGCTGAGCATCTCTCCCAGTAACACTTTTCTTGTCGAG TTGGACGCTCCTTTAAGAGCTATTACACCAGGACAATATGCCGTATTCTA TGACGACACAGCTTGTTTGGGTTCGGCCCGCATCCTCAGCGCTAATCCCC TAAAGAAAAAAAACGCACAGACGCAGCAAGCTCAAGCCGCAAATCTGGTT AGCTAATGATGTTTCCTCTGAGCCAGAAAATAAACCAAATGTAAGAAGGC AGTCCAACTGCCAACACGGCATGTATAGATAGCATGGTAAATACGTTTTC ATAAATTTAAGCGCCGAGTAAATTTTAGACGTGAATCGACACTTTTAAAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3021-RA | 1445 | CG3021-RA | 98..1445 | 1..1348 | 6740 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 920841..921530 | 1..690 | 99 | -> | Plus |
chrX | 921619..922274 | 691..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 1..1170 | 37..1206 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 1..1170 | 37..1206 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 1..1170 | 37..1206 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 1..1170 | 37..1206 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 1..1170 | 37..1206 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 1..1346 | 1..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 24..1369 | 1..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 67..1412 | 1..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 1..1346 | 1..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3021-RA | 67..1412 | 1..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1026857..1027546 | 1..690 | 100 | -> | Plus |
X | 1027635..1028290 | 691..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1026857..1027546 | 1..690 | 100 | -> | Plus |
X | 1027635..1028290 | 691..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1026857..1027546 | 1..690 | 100 | -> | Plus |
X | 1027635..1028290 | 691..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 920890..921579 | 1..690 | 100 | -> | Plus |
arm_X | 921668..922323 | 691..1346 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 1034955..1035644 | 1..690 | 100 | -> | Plus |
X | 1035733..1036388 | 691..1346 | 100 | Plus |
Translation from 0 to 1205
> LD29918.hyp ITLKLLLCQHRPMIRNVVVGVSGGVDSAVSAHLLAEQGFKVLGVFMRNWD EADEVGRCSGEADLKDAEWACRQLGVELRQVNYVREYWTAVFSQFLDDYQ MGLTPNPDILCNRHIKFDLFHKHALENLGYDAVATGHYARNSLGNYLEGI ASNNDARLLIPADTFKDQTFFLAGISRKALQRTMFPLGDFQKSQVKDLAK KIGFQRLAKKKESTGICFVGKRNFKDFIQEYITSKRGPFLDIDSGAVVGH HEGIHQWTVGQRCRLSSFLQPYFVARKEAASNTIYVASGHNHPALLSTHI AVDPPNWLCSKSQQILSDTGSLRCRFRFQHTKPLVDCQLSISPSNTFLVE LDAPLRAITPGQYAVFYDDTACLGSARILSANPLKKKNAQTQQAQAANLV S*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3021-PA | 389 | CG3021-PA | 1..389 | 13..401 | 2043 | 100 | Plus |
Translation from 36 to 1205
> LD29918.pep MIRNVVVGVSGGVDSAVSAHLLAEQGFKVLGVFMRNWDEADEVGRCSGEA DLKDAEWACRQLGVELRQVNYVREYWTAVFSQFLDDYQMGLTPNPDILCN RHIKFDLFHKHALENLGYDAVATGHYARNSLGNYLEGIASNNDARLLIPA DTFKDQTFFLAGISRKALQRTMFPLGDFQKSQVKDLAKKIGFQRLAKKKE STGICFVGKRNFKDFIQEYITSKRGPFLDIDSGAVVGHHEGIHQWTVGQR CRLSSFLQPYFVARKEAASNTIYVASGHNHPALLSTHIAVDPPNWLCSKS QQILSDTGSLRCRFRFQHTKPLVDCQLSISPSNTFLVELDAPLRAITPGQ YAVFYDDTACLGSARILSANPLKKKNAQTQQAQAANLVS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22123-PA | 388 | GF22123-PA | 1..374 | 1..373 | 1641 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12823-PA | 411 | GG12823-PA | 1..388 | 1..389 | 1887 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11989-PA | 381 | GH11989-PA | 1..376 | 1..378 | 1531 | 74.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3021-PA | 389 | CG3021-PA | 1..389 | 1..389 | 2043 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15611-PA | 380 | GI15611-PA | 1..370 | 1..373 | 1576 | 76.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL14198-PA | 387 | GL14198-PA | 1..386 | 1..386 | 1638 | 77.2 | Plus |
Dper\GL14219-PA | 126 | GL14219-PA | 16..113 | 175..265 | 195 | 44.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22395-PA | 387 | GA22395-PA | 1..386 | 1..386 | 1635 | 77.2 | Plus |
Dpse\GA22702-PA | 129 | GA22702-PA | 28..116 | 196..265 | 249 | 57.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19108-PA | 389 | GM19108-PA | 1..389 | 1..389 | 2043 | 96.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16539-PA | 389 | GD16539-PA | 1..389 | 1..389 | 2050 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15215-PA | 363 | GJ15215-PA | 1..353 | 1..373 | 1311 | 70.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16353-PA | 380 | GK16353-PA | 1..380 | 1..385 | 1480 | 69.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16655-PA | 388 | GE16655-PA | 1..388 | 1..389 | 1845 | 92.5 | Plus |