BDGP Sequence Production Resources |
Search the DGRC for LD29969
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 299 |
Well: | 69 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18787-RA |
Protein status: | LD29969.pep: wuzgold |
Preliminary Size: | 1595 |
Sequenced Size: | 1386 |
Gene | Date | Evidence |
---|---|---|
CG18787 | 2001-07-04 | Blastp of sequenced clone |
CG18787 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18789 | 2008-04-29 | Release 5.5 accounting |
CG18787 | 2008-08-15 | Release 5.9 accounting |
CG18787 | 2008-12-18 | 5.12 accounting |
1386 bp (1386 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060393
> LD29969.complete AAGACAATTATAAACAAAAGTACAAAAGTTGAAGCAGTTTTGAAATAATA AATATAGGAAATAGGCAAAAATTAAAATCAAATTTAAATATGGTTGTCTG CCGGTTCTTTCAACAAGGCTCCTGCCGCTATGGCGCAAAGTGCAACAACG AGCATTTCGATGTTAAGCAATATCTCAAAGCCGACATGGAATCCAGCCTC AATGGCAAGATGTGGCCTTTGTCCGCCTACGGACCCTTTAAGGACAAAGC GAATTTCCCCAACTTTATTCAGGACCAATCCTTCGAGGAGGTGCGGTTCA TGTGTTACGAGGCCAAACGACAAAACCAATTCGAACAGTTCAGCCAACAG TTTAACCGTGAGGTCCTAGAGGCTAACAACAAGATGAAGACCATGCTTCA GATGTCGCCGCAGGTCCTGGAAATGATGATCAAGATCCACGAGACGCCGG AGGGCGGCACTGTGTCGGCTGCCCCTCAGCAGTCCAGTAATCCCTTCGCT GCAGCAGCTCCGGCTGCCGCCAATACATCTGCATCCATTTTTGGAAAGCC CACGCTGAGTGCGGGAAATATATTTGGGAATGCCACAAGCCAAGCCAGCA ACACCAATAGCATTTTCGGCGGAACGATTAGCAATGCCAATGCAAGGAAT AGCATTTTTGGTGTAGGAGCTGCGGCAACAGGTGCACAAAGTGTCTTTGG ACAGCCACAGCAGCAACAGCTGCAGCCTGCTGCACAAGCTTTCCAAGGGG GCAACATTTTCGCCCAGGCGCAGGTTCAGGTGCAAGCTCAGCCAGTGAAT CCTAATCCTTTCGGTGGTTTCCAACAGCAGCAGCAGCAACCGCAGTCGAC GGGAATCTTTGGCCAAGCCGCAAGCCAAAATATGGGCGGAATGTTTACTC AGGCTTCTCAGCAACTACAACAGCAGCAGCAGGCAGCTGCCTCCGGATTA TTTGCTCAAGCAGCAGCATCTGCATTCCCTAATCAACAACAGATGCAGCA GCAGCAACAGATGCAGCAGCAGCAACAGATGCAACAGCAACAAATGCATC AGCAGCAGCAGATGCAATAGCAACAAATGCAGCAGCAACAACAATTTCAA ATGCAACAGCAACAGCAAATGATGCAGCAGCAGCAGCAGCAGCAAGCTCA ACCGACCAACGAAATCCAGTCCTCAGTTTACAGTCGCATGGAGGATCTCA ACGAGCAGGAAATCGAAGCATTCAAGGCGGATCAATTTCTACCAGGTGCC TTGCCATTCAAACCGCCTCCACGGAATCTTTGCTGAACCAAACACTTAAT GGTACACTAGCGTATAATGTATATATTTTTACAGAAGCTGATATAATAAA ATAATTAGAACTTAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18787-RA | 1587 | CG18787-RA | 220..1583 | 1..1364 | 6820 | 100 | Plus |
CG18789-RA | 1308 | CG18789-RA | 23..1308 | 1..1286 | 6260 | 99.3 | Plus |
CG18787.a | 1556 | CG18787.a | 631..1556 | 361..1286 | 4460 | 99 | Plus |
CG18787.a | 1556 | CG18787.a | 220..637 | 1..418 | 2090 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 11996562..11997762 | 1363..163 | 5990 | 99.9 | Minus |
chr2L | 23010047 | chr2L | 11992642..11993851 | 1363..163 | 5785 | 98.9 | Minus |
chr2L | 23010047 | chr2L | 11993902..11994068 | 167..1 | 835 | 100 | Minus |
chr2L | 23010047 | chr2L | 11997813..11997979 | 167..1 | 835 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11997899..11999100 | 1364..163 | 5995 | 99.9 | Minus |
2L | 23513712 | 2L | 11993988..11995189 | 1364..163 | 5805 | 99.2 | Minus |
2L | 23513712 | 2L | 11995240..11995406 | 167..1 | 835 | 100 | Minus |
2L | 23513712 | 2L | 11999151..11999317 | 167..1 | 835 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 11997899..11999100 | 1364..163 | 5995 | 99.9 | Minus |
2L | 23513712 | 2L | 11993988..11995189 | 1364..163 | 5825 | 99.1 | Minus |
2L | 23513712 | 2L | 11999151..11999317 | 167..1 | 835 | 100 | Minus |
2L | 23513712 | 2L | 11995240..11995406 | 167..1 | 835 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6699..6962 | 886..1161 | 435 | 64.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2599 | 923..1220 | 407 | 62.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2313..2548 | 909..1147 | 405 | 65.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..7004 | 909..1152 | 346 | 61.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2473..2664 | 959..1152 | 306 | 66 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2663 | 822..1168 | 302 | 57.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2622..2966 | 822..1169 | 291 | 58.5 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2796..2999 | 909..1115 | 289 | 63.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2811..3031 | 909..1135 | 277 | 60.4 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6800..7054 | 909..1164 | 277 | 58 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2640..2942 | 909..1224 | 258 | 59.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6821..7130 | 909..1218 | 255 | 57.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2370..2764 | 822..1207 | 243 | 56.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2584..2870 | 907..1183 | 228 | 60.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2418..2720 | 822..1120 | 227 | 56.6 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..7086 | 822..1144 | 195 | 55.1 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6681..7231 | 623..1168 | 192 | 55.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2805..2999 | 822..1037 | 158 | 58.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6842..7092 | 822..1078 | 153 | 56.7 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6806..7172 | 822..1169 | 142 | 54.7 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1071..1163 | 910..1002 | 140 | 63.8 | Plus |
Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3276..3430 | 903..1054 | 138 | 58.2 | Plus |
Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6603..6727 | 909..1042 | 115 | 60.4 | Plus |
TART-C | 11124 | TART-C TARTC 11124bp | 8059..8183 | 909..1042 | 115 | 60.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 11996939..11997758 | 167..986 | 100 | <- | Minus |
chr2L | 11997814..11997979 | 1..166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18789-RA | 1..1197 | 90..1286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18789-RA | 1..1197 | 90..1286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18787-RB | 1..1197 | 90..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18789-RA | 1..1197 | 90..1286 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18787-RB | 1..1197 | 90..1286 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18787-RA | 1..1363 | 1..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18787-RA | 1..1363 | 1..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18787-RB | 24..1386 | 1..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18787-RA | 1..1363 | 1..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18787-RB | 24..1386 | 1..1363 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11997900..11999096 | 167..1363 | 100 | <- | Minus |
2L | 11999152..11999317 | 1..166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11997900..11999096 | 167..1363 | 100 | <- | Minus |
2L | 11999152..11999317 | 1..166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11997900..11999096 | 167..1363 | 100 | <- | Minus |
2L | 11999152..11999317 | 1..166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 11997900..11999096 | 167..1363 | 100 | <- | Minus |
arm_2L | 11999152..11999317 | 1..166 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 11997900..11999096 | 167..1363 | 100 | <- | Minus |
2L | 11999152..11999317 | 1..166 | 100 | Minus |
Translation from 89 to 1069
> LD29969.hyp MVVCRFFQQGSCRYGAKCNNEHFDVKQYLKADMESSLNGKMWPLSAYGPF KDKANFPNFIQDQSFEEVRFMCYEAKRQNQFEQFSQQFNREVLEANNKMK TMLQMSPQVLEMMIKIHETPEGGTVSAAPQQSSNPFAAAAPAAANTSASI FGKPTLSAGNIFGNATSQASNTNSIFGGTISNANARNSIFGVGAAATGAQ SVFGQPQQQQLQPAAQAFQGGNIFAQAQVQVQAQPVNPNPFGGFQQQQQQ PQSTGIFGQAASQNMGGMFTQASQQLQQQQQAAASGLFAQAAASAFPNQQ QMQQQQQMQQQQQMQQQQMHQQQQMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18789-PA | 398 | CG18789-PA | 1..326 | 1..326 | 1679 | 100 | Plus |
CG18787-PB | 398 | CG18787-PB | 1..326 | 1..326 | 1679 | 100 | Plus |
Wnk-PN | 2441 | CG7177-PN | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
Wnk-PL | 2441 | CG7177-PL | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
Wnk-PM | 2462 | CG7177-PM | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
Translation from 89 to 1069
> LD29969.pep MVVCRFFQQGSCRYGAKCNNEHFDVKQYLKADMESSLNGKMWPLSAYGPF KDKANFPNFIQDQSFEEVRFMCYEAKRQNQFEQFSQQFNREVLEANNKMK TMLQMSPQVLEMMIKIHETPEGGTVSAAPQQSSNPFAAAAPAAANTSASI FGKPTLSAGNIFGNATSQASNTNSIFGGTISNANARNSIFGVGAAATGAQ SVFGQPQQQQLQPAAQAFQGGNIFAQAQVQVQAQPVNPNPFGGFQQQQQQ PQSTGIFGQAASQNMGGMFTQASQQLQQQQQAAASGLFAQAAASAFPNQQ QMQQQQQMQQQQQMQQQQMHQQQQMQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14754-PA | 366 | GF14754-PA | 1..281 | 1..297 | 770 | 64.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10287-PA | 400 | GG10287-PA | 1..298 | 1..298 | 1067 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13061-PA | 370 | GH13061-PA | 1..315 | 1..305 | 536 | 47.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18789-PA | 398 | CG18789-PA | 1..326 | 1..326 | 1679 | 100 | Plus |
CG18787-PB | 398 | CG18787-PB | 1..326 | 1..326 | 1679 | 100 | Plus |
Wnk-PO | 2243 | CG7177-PO | 846..968 | 205..326 | 180 | 42.7 | Plus |
Wnk-PN | 2441 | CG7177-PN | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
Wnk-PL | 2441 | CG7177-PL | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
Wnk-PM | 2462 | CG7177-PM | 1044..1166 | 205..326 | 180 | 42.7 | Plus |
ovo-PA | 975 | CG6824-PA | 292..420 | 204..326 | 176 | 40.5 | Plus |
ovo-PD | 1028 | CG6824-PD | 345..473 | 204..326 | 176 | 40.5 | Plus |
ovo-PC | 1222 | CG6824-PC | 717..845 | 204..326 | 176 | 40.5 | Plus |
ovo-PE | 1351 | CG6824-PE | 846..974 | 204..326 | 176 | 40.5 | Plus |
ovo-PB | 1351 | CG6824-PB | 846..974 | 204..326 | 176 | 40.5 | Plus |
CG44085-PH | 756 | CG44085-PH | 311..430 | 200..326 | 172 | 41.5 | Plus |
CG44085-PL | 833 | CG44085-PL | 388..507 | 200..326 | 172 | 41.5 | Plus |
CG44085-PI | 833 | CG44085-PI | 388..507 | 200..326 | 172 | 41.5 | Plus |
CG44085-PC | 836 | CG44085-PC | 388..507 | 200..326 | 172 | 41.5 | Plus |
CG44085-PM | 864 | CG44085-PM | 273..392 | 200..326 | 172 | 41.5 | Plus |
CG44085-PF | 902 | CG44085-PF | 311..430 | 200..326 | 172 | 41.5 | Plus |
CG44085-PD | 918 | CG44085-PD | 311..430 | 200..326 | 172 | 41.5 | Plus |
CG44085-PG | 942 | CG44085-PG | 311..430 | 200..326 | 172 | 41.5 | Plus |
CG44085-PK | 979 | CG44085-PK | 388..507 | 200..326 | 172 | 41.5 | Plus |
CG44085-PJ | 979 | CG44085-PJ | 388..507 | 200..326 | 172 | 41.5 | Plus |
CG44085-PN | 1007 | CG44085-PN | 388..507 | 200..326 | 172 | 41.5 | Plus |
CG44085-PP | 2246 | CG44085-PP | 284..403 | 200..326 | 172 | 41.5 | Plus |
CG44085-PO | 2381 | CG44085-PO | 273..392 | 200..326 | 172 | 41.5 | Plus |
Nup214-PA | 1711 | CG3820-PA | 1395..1610 | 118..305 | 168 | 34.5 | Plus |
Smr-PF | 3601 | CG4013-PF | 4..199 | 142..326 | 167 | 31.6 | Plus |
Smr-PE | 3601 | CG4013-PE | 4..199 | 142..326 | 167 | 31.6 | Plus |
Smr-PD | 3601 | CG4013-PD | 4..199 | 142..326 | 167 | 31.6 | Plus |
nej-PE | 3266 | CG15319-PE | 1151..1293 | 206..326 | 161 | 37.9 | Plus |
nej-PB | 3276 | CG15319-PB | 1151..1293 | 206..326 | 161 | 37.9 | Plus |
nej-PD | 3276 | CG15319-PD | 1151..1293 | 206..326 | 161 | 37.9 | Plus |
nej-PC | 3282 | CG15319-PC | 1157..1299 | 206..326 | 161 | 37.9 | Plus |
Smr-PG | 3607 | CG4013-PG | 4..205 | 142..326 | 161 | 30.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17681-PA | 381 | GI17681-PA | 1..182 | 1..190 | 568 | 59.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19578-PA | 353 | GL19578-PA | 1..268 | 1..292 | 752 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15081-PA | 378 | GA15081-PA | 1..268 | 1..292 | 754 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26462-PA | 395 | GM26462-PA | 1..294 | 1..298 | 1154 | 93.3 | Plus |
Dsec\GM24560-PA | 667 | GM24560-PA | 1..103 | 1..128 | 242 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22145-PA | 399 | GD22145-PA | 1..297 | 1..298 | 1107 | 95 | Plus |
Dsim\GD12633-PA | 694 | GD12633-PA | 1..127 | 1..127 | 331 | 47.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17466-PA | 403 | GJ17466-PA | 1..315 | 1..275 | 623 | 50.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15175-PA | 397 | GK15175-PA | 1..198 | 1..204 | 694 | 63.8 | Plus |