BDGP Sequence Production Resources |
Search the DGRC for LD30049
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 300 |
Well: | 49 |
Vector: | pOT2 |
Associated Gene/Transcript | CG5704-RA |
Protein status: | LD30049.pep: gold |
Preliminary Size: | 1387 |
Sequenced Size: | 1210 |
Gene | Date | Evidence |
---|---|---|
CG5704 | 2001-01-01 | Release 2 assignment |
CG5704 | 2002-05-15 | Blastp of sequenced clone |
CG5704 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5704 | 2008-04-29 | Release 5.5 accounting |
CG5704 | 2008-08-15 | Release 5.9 accounting |
CG5704 | 2008-12-18 | 5.12 accounting |
1210 bp (1210 high quality bases) assembled on 2002-05-15
GenBank Submission: AY118547
> LD30049.complete AGAAAGACGAGTAGACAATCAAACGGAATACAAATGATTTAGAGCAAATT AAGATAAGCAAAAACCAGTACTACTTAAATCGAGAATTAAGAGCAATGGG AACTTTGTCACTGAGCGATTTCGAAGCTGTGAAGATTCCCGTACCCTGGG GTCACATTTCTGGACGTTGGTACGGAAATCGGAACGAGCGACCCATCTTG GCGATTCACGGATGGCTGGACAACCTGGGAACCTTCGATCGGCTCATTCC CCTGCTTCCTGACTATCTAGGAGTACTCTGCATCGATCTGCCAGGACATG GAAGATCCTCGCATTTGCCACCGGGAATGTACTACAGTGTGTACGAGTAC GTGTTCACTATTCCACTGGTCATGAAGGAGTACGGATGGTCAAAGGTCTC TCTCATTGGACACTCACTGGGCGGAGTCCTGAGCTTCATTTATGCCTCTC TTGCTCCTCACACCGTCGATATGATCGTCTCCCTGGACATACTGCTCCCC TTGAGAAACGACATAGACTACATGGACCTTAGTATAGAGAAACAACTAGT GAATGTTGAGCGACAGAAGCTGGGAAATTACATTGAGCCGCCCTCCTACA CGCACAACCAATTGGGAAAGGTGCTGGCTGCGGGAAGCTTTAATTCCGTA TCCCCCGAACTGGCTAAGCACCTCCTCCACCGCCAGTTGGCCAAGTCGAA ACTGTATCCCGAACGGTTCTATTTCACTAGGGATATTCGAGTAAAGTACT ACCACTACATAGATATCGACGATAGTCTGGGGGCAGAAATGGCGAGGCGG ATCATTAAAAAGCCATATCTAATCATCAAGGGCTCCTTGTCACCATATCT CTCCGTCCGCAACAACGAGGCTATATCGATTTTGGCCAAGGATAATCCGC ACTTTGAGTTCTACGAGGTGGAAAACGGCACCCATCATCTGCATCTCCAT GCCGCCGAGGAATGCGCCGGTTACATTGTGCCCTTCATCCAACATCACAG ACCTCCTGCTATGACCTCCTGGACTGTGGCCGGAAAGGAAGATAGATCGA GAAAACCAAAGCGATTTTTCACATGGACCAACAAAAAGCGCAGCAAGTTG TGATAATAATACACTGTAACTTTAGTTGTAAAGGTTTTAAAGTTTGAGAA CGTGAACACACGACAAGTATTAAATTTAAACTATCATATTAAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5704-RA | 1633 | CG5704-RA | 292..1484 | 1..1193 | 5965 | 100 | Plus |
CG15879.a | 1469 | CG15879.a | 211..618 | 96..503 | 720 | 78.4 | Plus |
CG15879-RA | 1469 | CG15879-RA | 211..618 | 96..503 | 720 | 78.4 | Plus |
CG15879.a | 1469 | CG15879.a | 1021..1130 | 894..1003 | 250 | 81.8 | Plus |
CG15879-RA | 1469 | CG15879-RA | 1021..1130 | 894..1003 | 250 | 81.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 2169077..2170147 | 1190..120 | 5025 | 97.9 | Minus |
chr3L | 24539361 | chr3L | 2167852..2168212 | 503..143 | 680 | 79.2 | Minus |
chr3L | 24539361 | chr3L | 2173107..2173417 | 439..129 | 550 | 78.5 | Minus |
chr3L | 24539361 | chr3L | 2170277..2170394 | 119..1 | 530 | 98.3 | Minus |
chr3L | 24539361 | chr3L | 2171843..2172136 | 423..130 | 495 | 77.9 | Minus |
chr3L | 24539361 | chr3L | 2172537..2172680 | 1006..863 | 270 | 79.2 | Minus |
chr3L | 24539361 | chr3L | 2167337..2167449 | 1006..894 | 265 | 82.3 | Minus |
chr3L | 24539361 | chr3L | 2171333..2171391 | 937..879 | 250 | 94.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CR15821-RA | 888 | CR15821-RA | 38..164 | 130..256 | 260 | 80.3 | Plus |
CR15821-RA | 888 | CR15821-RA | 727..785 | 879..937 | 235 | 93.2 | Plus |
CR15821-RA | 888 | CR15821-RA | 178..236 | 270..328 | 205 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 2169619..2170692 | 1193..120 | 5370 | 100 | Minus |
3L | 28110227 | 3L | 2168401..2168761 | 503..143 | 680 | 79.2 | Minus |
3L | 28110227 | 3L | 2170823..2170941 | 119..1 | 595 | 100 | Minus |
3L | 28110227 | 3L | 2173650..2173960 | 439..129 | 520 | 77.8 | Minus |
3L | 28110227 | 3L | 2172387..2172680 | 423..130 | 480 | 77.6 | Minus |
3L | 28110227 | 3L | 2173080..2173195 | 1006..891 | 265 | 81.9 | Minus |
3L | 28110227 | 3L | 2167889..2167998 | 1003..894 | 250 | 81.8 | Minus |
3L | 28110227 | 3L | 2171880..2171938 | 937..879 | 235 | 93.2 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 2169619..2170692 | 1193..120 | 5370 | 100 | Minus |
3L | 28103327 | 3L | 2168401..2168761 | 503..143 | 680 | 79.2 | Minus |
3L | 28103327 | 3L | 2170823..2170941 | 119..1 | 595 | 100 | Minus |
3L | 28103327 | 3L | 2173782..2173960 | 307..129 | 445 | 83.2 | Minus |
3L | 28103327 | 3L | 2173080..2173195 | 1006..891 | 265 | 81.8 | Minus |
3L | 28103327 | 3L | 2172554..2172680 | 256..130 | 260 | 80.3 | Minus |
3L | 28103327 | 3L | 2167889..2167998 | 1003..894 | 250 | 81.8 | Minus |
3L | 28103327 | 3L | 2171880..2171938 | 937..879 | 235 | 93.2 | Minus |
3L | 28103327 | 3L | 2172482..2172540 | 328..270 | 205 | 89.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 2169077..2170147 | 120..1190 | 97 | <- | Minus |
chr3L | 2170277..2170394 | 1..119 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 1..1008 | 96..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 1..1008 | 96..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 1..1008 | 96..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 1..1008 | 96..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 1..1008 | 96..1103 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 14..1203 | 1..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 1..1190 | 1..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 31..1220 | 1..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 14..1203 | 1..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5704-RA | 31..1220 | 1..1190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2169622..2170692 | 120..1190 | 100 | <- | Minus |
3L | 2170823..2170941 | 1..119 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2169622..2170692 | 120..1190 | 100 | <- | Minus |
3L | 2170823..2170941 | 1..119 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2169622..2170692 | 120..1190 | 100 | <- | Minus |
3L | 2170823..2170941 | 1..119 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 2169622..2170692 | 120..1190 | 100 | <- | Minus |
arm_3L | 2170823..2170941 | 1..119 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 2169622..2170692 | 120..1190 | 100 | <- | Minus |
3L | 2170823..2170941 | 1..119 | 100 | Minus |
Translation from 95 to 1102
> LD30049.pep MGTLSLSDFEAVKIPVPWGHISGRWYGNRNERPILAIHGWLDNLGTFDRL IPLLPDYLGVLCIDLPGHGRSSHLPPGMYYSVYEYVFTIPLVMKEYGWSK VSLIGHSLGGVLSFIYASLAPHTVDMIVSLDILLPLRNDIDYMDLSIEKQ LVNVERQKLGNYIEPPSYTHNQLGKVLAAGSFNSVSPELAKHLLHRQLAK SKLYPERFYFTRDIRVKYYHYIDIDDSLGAEMARRIIKKPYLIIKGSLSP YLSVRNNEAISILAKDNPHFEFYEVENGTHHLHLHAAEECAGYIVPFIQH HRPPAMTSWTVAGKEDRSRKPKRFFTWTNKKRSKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24932-PA | 342 | GF24932-PA | 1..342 | 1..335 | 1285 | 70.8 | Plus |
Dana\GF24933-PA | 344 | GF24933-PA | 1..344 | 1..335 | 1214 | 65.9 | Plus |
Dana\GF24931-PA | 315 | GF24931-PA | 8..298 | 12..302 | 977 | 62 | Plus |
Dana\GF24930-PA | 362 | GF24930-PA | 22..332 | 12..318 | 802 | 50 | Plus |
Dana\GF24201-PA | 348 | GF24201-PA | 35..347 | 9..320 | 646 | 41.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14531-PA | 335 | GG14531-PA | 1..335 | 1..335 | 1651 | 91.3 | Plus |
Dere\GG14532-PA | 344 | GG14532-PA | 1..344 | 1..335 | 1186 | 64.3 | Plus |
Dere\GG14530-PA | 314 | GG14530-PA | 14..309 | 10..304 | 1091 | 68.2 | Plus |
Dere\GG14529-PA | 357 | GG14529-PA | 22..329 | 12..316 | 763 | 49.8 | Plus |
Dere\GG13244-PA | 349 | GG13244-PA | 36..348 | 9..320 | 656 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16488-PA | 343 | GH16488-PA | 1..343 | 1..335 | 1029 | 58.7 | Plus |
Dgri\GH23210-PA | 318 | GH23210-PA | 1..307 | 1..305 | 864 | 55.8 | Plus |
Dgri\GH16489-PA | 318 | GH16489-PA | 1..307 | 1..305 | 864 | 55.8 | Plus |
Dgri\GH16485-PA | 353 | GH16485-PA | 23..329 | 12..315 | 807 | 50.6 | Plus |
Dgri\GH16159-PA | 359 | GH16159-PA | 39..341 | 2..303 | 651 | 43.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5704-PB | 335 | CG5704-PB | 1..335 | 1..335 | 1791 | 100 | Plus |
CG5704-PA | 335 | CG5704-PA | 1..335 | 1..335 | 1791 | 100 | Plus |
CG15879-PA | 342 | CG15879-PA | 1..342 | 4..335 | 1212 | 65.2 | Plus |
CG15820-PA | 308 | CG15820-PA | 7..303 | 9..304 | 1096 | 68.4 | Plus |
CG5707-PA | 357 | CG5707-PA | 22..329 | 12..316 | 799 | 49.2 | Plus |
CG5707-PC | 361 | CG5707-PC | 26..333 | 12..316 | 799 | 49.2 | Plus |
CG5707-PB | 361 | CG5707-PB | 26..333 | 12..316 | 799 | 49.2 | Plus |
CG11309-PF | 348 | CG11309-PF | 35..347 | 9..320 | 663 | 43.1 | Plus |
CG11309-PE | 348 | CG11309-PE | 35..347 | 9..320 | 663 | 43.1 | Plus |
CG11309-PD | 348 | CG11309-PD | 35..347 | 9..320 | 663 | 43.1 | Plus |
CG11309-PC | 348 | CG11309-PC | 35..347 | 9..320 | 663 | 43.1 | Plus |
CG11309-PB | 348 | CG11309-PB | 35..347 | 9..320 | 663 | 43.1 | Plus |
CG11309-PA | 358 | CG11309-PA | 45..357 | 9..320 | 663 | 43.1 | Plus |
CG7632-PB | 312 | CG7632-PB | 13..311 | 6..303 | 617 | 44.1 | Plus |
CG7632-PA | 330 | CG7632-PA | 34..329 | 9..303 | 613 | 44.2 | Plus |
kraken-PB | 331 | CG3943-PB | 34..329 | 4..299 | 398 | 31.8 | Plus |
kraken-PA | 331 | CG3943-PA | 34..329 | 4..299 | 398 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12160-PA | 342 | GI12160-PA | 1..342 | 1..335 | 1109 | 62.4 | Plus |
Dmoj\GI12161-PA | 343 | GI12161-PA | 1..343 | 1..335 | 967 | 54.2 | Plus |
Dmoj\GI12158-PA | 395 | GI12158-PA | 61..376 | 12..324 | 798 | 48.6 | Plus |
Dmoj\GI13311-PA | 352 | GI13311-PA | 39..334 | 9..303 | 626 | 43.2 | Plus |
Dmoj\GI12011-PA | 336 | GI12011-PA | 40..335 | 9..303 | 594 | 43 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24626-PA | 348 | GL24626-PA | 1..348 | 1..335 | 1228 | 65.5 | Plus |
Dper\GL24627-PA | 331 | GL24627-PA | 1..324 | 1..322 | 1016 | 59.6 | Plus |
Dper\GL24589-PA | 348 | GL24589-PA | 35..347 | 9..320 | 647 | 41.8 | Plus |
Dper\GL24680-PA | 330 | GL24680-PA | 34..329 | 9..303 | 601 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA23367-PA | 348 | GA23367-PA | 1..348 | 1..335 | 1236 | 66.1 | Plus |
Dpse\GA23368-PA | 332 | GA23368-PA | 1..326 | 1..324 | 998 | 58.4 | Plus |
Dpse\GA19073-PA | 365 | GA19073-PA | 29..335 | 12..315 | 789 | 48.7 | Plus |
Dpse\GA10906-PA | 348 | GA10906-PA | 35..347 | 9..320 | 647 | 41.8 | Plus |
Dpse\GA20494-PA | 330 | GA20494-PA | 34..329 | 9..303 | 600 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14138-PA | 293 | GM14138-PA | 1..270 | 1..270 | 1330 | 93.7 | Plus |
Dsec\GM14139-PA | 345 | GM14139-PA | 1..345 | 1..335 | 1230 | 65.8 | Plus |
Dsec\GM14136-PA | 308 | GM14136-PA | 7..303 | 9..304 | 1076 | 67.3 | Plus |
Dsec\GM14137-PA | 323 | GM14137-PA | 15..314 | 10..305 | 959 | 59 | Plus |
Dsec\GM26924-PA | 355 | GM22149-PA | 37..354 | 4..320 | 660 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13408-PA | 335 | GD13408-PA | 1..335 | 1..335 | 1647 | 92.8 | Plus |
Dsim\GD13410-PA | 345 | GD13410-PA | 1..345 | 1..335 | 1230 | 65.5 | Plus |
Dsim\GD13406-PA | 308 | GD13406-PA | 6..303 | 8..304 | 1086 | 67.8 | Plus |
Dsim\GD13407-PA | 319 | GD13407-PA | 2..310 | 1..305 | 969 | 58.3 | Plus |
Dsim\GD13405-PA | 357 | GD13405-PA | 22..329 | 12..316 | 767 | 49.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11632-PA | 343 | GJ11632-PA | 1..343 | 1..335 | 1099 | 61.6 | Plus |
Dvir\GJ13440-PA | 343 | GJ13440-PA | 1..343 | 1..335 | 1033 | 59 | Plus |
Dvir\GJ13439-PA | 340 | GJ13439-PA | 1..331 | 1..329 | 1007 | 58.7 | Plus |
Dvir\GJ13437-PA | 357 | GJ13437-PA | 23..338 | 12..324 | 805 | 49.8 | Plus |
Dvir\GJ12081-PA | 357 | GJ12081-PA | 44..339 | 9..303 | 655 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12602-PA | 346 | GK12602-PA | 1..346 | 1..335 | 1122 | 61.4 | Plus |
Dwil\GK12598-PA | 358 | GK12598-PA | 21..323 | 12..311 | 761 | 50.7 | Plus |
Dwil\GK20424-PA | 352 | GK20424-PA | 31..333 | 2..303 | 648 | 43.2 | Plus |
Dwil\GK20467-PA | 335 | GK20467-PA | 39..334 | 9..303 | 596 | 43.3 | Plus |
Dwil\GK24439-PA | 338 | GK24439-PA | 33..335 | 2..298 | 428 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20883-PA | 335 | GE20883-PA | 1..335 | 1..335 | 1635 | 91 | Plus |
Dyak\GE20884-PA | 341 | GE20884-PA | 1..317 | 4..317 | 1165 | 68.2 | Plus |
Dyak\GE20881-PA | 314 | GE20881-PA | 1..309 | 1..304 | 1094 | 66.3 | Plus |
Dyak\GE20882-PA | 319 | GE20882-PA | 2..313 | 1..308 | 977 | 58 | Plus |
Dyak\GE20878-PA | 357 | GE20878-PA | 22..329 | 12..316 | 764 | 50.2 | Plus |
Translation from 95 to 1102
> LD30049.hyp MGTLSLSDFEAVKIPVPWGHISGRWYGNRNERPILAIHGWLDNLGTFDRL IPLLPDYLGVLCIDLPGHGRSSHLPPGMYYSVYEYVFTIPLVMKEYGWSK VSLIGHSLGGVLSFIYASLAPHTVDMIVSLDILLPLRNDIDYMDLSIEKQ LVNVERQKLGNYIEPPSYTHNQLGKVLAAGSFNSVSPELAKHLLHRQLAK SKLYPERFYFTRDIRVKYYHYIDIDDSLGAEMARRIIKKPYLIIKGSLSP YLSVRNNEAISILAKDNPHFEFYEVENGTHHLHLHAAEECAGYIVPFIQH HRPPAMTSWTVAGKEDRSRKPKRFFTWTNKKRSKL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG5704-PB | 335 | CG5704-PB | 1..335 | 1..335 | 1791 | 100 | Plus |
CG5704-PA | 335 | CG5704-PA | 1..335 | 1..335 | 1791 | 100 | Plus |
CG15879-PA | 342 | CG15879-PA | 1..342 | 4..335 | 1212 | 65.2 | Plus |
CG15820-PA | 308 | CG15820-PA | 7..303 | 9..304 | 1096 | 68.4 | Plus |
CG5707-PA | 357 | CG5707-PA | 22..329 | 12..316 | 799 | 49.2 | Plus |