Clone LD30050 Report

Search the DGRC for LD30050

Clone and Library Details

Library:LD
Tissue Source:Drosophila melanogaster embryo
Created by:Ling Hong
Date Registered:1997-12-04
Comments:Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-)
Original Plate Number:300
Well:50
Vector:pOT2
Associated Gene/Transcriptmura-RA
Protein status:LD30050.pep: gold
Preliminary Size:3728
Sequenced Size:3789

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9381 2001-01-01 Release 2 assignment
CG9381 2002-03-29 Blastp of sequenced clone
CG9381 2003-01-01 Sim4 clustering to Release 3
mura 2008-04-29 Release 5.5 accounting
mura 2008-08-15 Release 5.9 accounting
mura 2008-12-18 5.12 accounting

Clone Sequence Records

LD30050.complete Sequence

3789 bp (3789 high quality bases) assembled on 2002-03-29

GenBank Submission: AY094811

> LD30050.complete
TCAGGTCGAACCCAAGCTGTGTGATTACAAGAAAAGCGCAAAGAAAGCTC
TCGCCCAGTCGAAAGTCGAATAGCAATAGCAGTGGCATCCACAACAGCAG
AAGCAGCAGCAACAACAACAGGCAGTAGCAACAACCGCAGGCAGGAGCAA
CAACAACAGTGCGGCAGCAGCATCTGCAGCAACAACAGTGCGGCAGCAGC
ATGCTGAACTCGAATGCCACCGGCGGCAACAATCATGGGGGCAGCAGCCG
TCGGCCCTTTACCCGCAATTCTTCATCGGTCCGCTCGCAACGCGGCGGTG
GTGGCGGGCTGGGCGGTCGCATGGTATACTCGCCACACACACATCCGCAC
GTCCAGCAGCAGCAACAACAACAACAGCAGCAACAGCAACAGGGGCAGCA
GCGGTCCAGCAATAACGGCAACAACAACCTGTGGCTGGGCAACAGTCCGT
GGTGCAACGTCAATTTAAACGGTGGCAACAGCGGCAACAACAATAACAAC
GGTGGCAACAACAACAATAACAACGGTGGCAACATCAGCAGCAACAACAA
CAGCAACAATGTCAATAACAAAGATGCAAACCCAAATTGCCACAGCCAAG
GTCAGGGACCCGGAAATTCCCCCAATCTTGGCCACAATCACCAACGTGGC
TACAACAACGGGAATAACAATCGGGGTATCGGGAACGGGATCGTAAATGG
TAATACCAATGGACCACCCGATTATATGAACTACCGACGTGGCGTGTGTC
CGGCTCAATCGCGGGACTATTCCGGCAACGGAAATGGAAATAACAACGGA
CATGGCCACAATGGACGTCGGTATATGTCCGATAACTTGAACAACCCGTC
CTCATCCATGAATGGCCTGATCAATTCCGGACACCACCAGCGCAACTACA
ACGACAGGAACTTGAATAACCACTTTGGAAACTCCGAACAGAACGGAGGA
CCCGACCATCGGGATCGAGCTGAGGGTTCTTCGTACAACTTTATGCGCAA
CGGAGGAGGTAGCGGGGGCGGTGGCTACGGACGCAATGGATCGCATTACC
AGCACATGGCCTATGGTAATAACAACGGTGCGTCCACTTCGACCGGCGGA
CCAGGACTTATGGGTGAACTGCCCTCGGGTTCGGGCCTGTCGGGCTCTTC
GCTGTCGCTGAACAACGGACCCGGAGGCCTCAACTCCGACAGTCCGTCGC
GTAAGCGCCGCCGCATCTCCGGAAGACCCCCGAACGGACCACAGCCCCAA
CACCGTTGTCCGATGGCACACATGCAGCAGGGAAGTCCGCCACTTAGACG
CCCGCGGTTGCGCGATGTGGCTACCTCCACGCAGCAGCAGCAACAGCAGT
ACGGCCATCAGGTTCATCATCCTCAGCAGCAGCAACAGCAGCCGCCATCC
AACTATCACCCGATGCACCATCATCAGCCACAACCGCACTACGTTCCTCA
GCAGCAGGTGCCACCGCCGCACGTCCAGCGTTCACCGTGGGATTTGGGCA
GCAGTGGAGGAAGCTCGGGAGGAGCCACCTCCAGCAGCTCGGTGGGTCCC
ATTCTGCAGCAGGTGCAGGCGCCGCCGCAGCCACCGAGTCACCAGCAAGC
GGTTGGCTATCCACAAGCACCGCCACAGCCCGCCTCCCTGATGGTGGACC
TCAATCTGAACCAGGTGCCAGTGAACCTGCAGTTGCGTCCCTCGGAGCCC
TTCTGGGCCTCCTTCTGCACCTATCCTATACCGGCGCAGGCTAGACTAGC
ACCCTGTCACTTGCACGGTGTCTACACGCAGCCATTCCCCGCCGCCCCAC
CACCAGGACTGGCCGCTCCTCCACTTCAACAACAGCATCAGCCACTTATT
CAGGCCCAGCAAATGATTTCCCAGGCCACCTTGACCGCCCAGCAGCAGCA
GCGGGATGTGGTGGCCATTGCAACGGCCAATCTGGGACCCATTGAAGCGC
CGGGTGCCCATGGCCATCCTCACGCCCATCCTCATGCTCATCCGCATGCC
CACCAGCTGCCGCCGGGCATCCATATCACGCCGCTGAGCGGAGCGGCGGC
AGCGGCCGCCACCCATCATCTACATTCCACGGCGGCAGCTGCAGCGGCCG
TCGCTGCCGGCGCCCAGATAACCACCGCGCAGCAGATCCTCTTCTCATCG
GACCGCCGCACATTCCCGCCCCACCGCCGCATACCGCGTTTCTGGACGGC
GAACCATGGACATCGTCACGTCCTGCCGCCGCAGTCGCTCGCCGCCCACC
AAGCTCCTGTCCAGATTCAGGCTACGTCGGGCATCATCAACCCTGGCTTC
TTGCTCAATTTCCTGGCCATGTTCCCGCTGTCGCCTTATAACCAACATGA
TCTGAGCTCTGGCGACACCAATGAGACGGAGAACTACGAGGCGCTGCTCA
GCCTGGCCGAGCGATTGGGTGAGGCCAAGCCGAGGGGACTCACCCGCAAT
GAGATCGATCAGTTGCCCAGCTACAAGTTCAACCCGGAGGTGCACAACGG
CGACCAATCATCCTGTGTGGTGTGCATGTGTGACTTTGAGCTACGTCAGC
TACTGCGCGTCCTGCCCTGTTCCCATGAATTCCACGCCAAGTGCGTGGAC
AAATGGCTGCGATCGAATCGCACCTGCCCAATTTGCCGCGGCAATGCCTC
CGACTACTTCGACGGCGTCGACCAGCAGCAACAGTCGCAGGCAACAGCCG
GAGCTGCGGCTGCATTGAGCGGCACGTCCGGCGGAAGTGCCGGAGTGGCG
GGAACTTCCGAGGCTTCAGCGGCCACCGCCAATCCACAGCAGAGCCAAGC
GGCCTAGACCGGAAACCCTATTCCACACACCTCAAGCTTTCGCTTTTCCG
GGCGATGAGTGATCGGGACAGAGGAGCATTCCGGGCGTGGAGGGCTGGTC
TTGGGCAGGGGGACCCACCTCCCACCACCGCCATCACTTGATGTAACGCG
CAACGAATCCAACTGCCAAACCGTCGACGCTTCCTCCTCAGCTGTATGCC
CCCGCCCAACTGGCCACGAATAATGTTTCCACCCGCTCCGCCCCTCGGCC
ACGCCCACGCGAAACTCGCCGCCTCTTCAATAGCTTGTCTTAGACATTAG
TTCGTATGTGAGTAATGGTAACCGTAATTAGGAGTAACCCATATACGCGT
ACCACCAAGAATTCAACTATAGTTAAACAGCGTATATATATATATGCGCA
GATATATTTGTGTGTCTGGAGAATGATAATGGCGTAAAGCAAGTGTCTGT
ATATAAGCCAAGATTTGCACAAAAAAATTAACAATAGAATTTCTTTGCCT
TTACAACTCGAGGATATCCTATAATCCATTCAAATAACTATATGCGAACA
AATATAGTGTATTCAAATGCTTGGCAGCGGTCACTCAAAACCCAGATGGT
TATGGTTATGGGGCATTCAGGAATTATTAATCCCCAGAGGGCTTTTCGGG
ACCTTTTGAGGCATCGGTGCCAAATCGAAATGGTTTATCTTGAATTGTTG
CTGTCCACACGCATAGCCATGCATAGCTCTATATTATATAGAATACATAT
TTAAGCAAAGCGAAATATTTGTAACTTGGATTTGTGTTTTCACGCTTTTG
AGTTAGGCTTGCGTATTTACTGCTTCCTCTACGTATTTTGTATTTACTAC
CATTACTTTTAGTTTTAATAACAACAACGTACTATATTTACCCATATACG
ACTTACACAAAAAACAGCATAAATATAGTGCATTGCATTTTATACTAATA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

LD30050.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:17:58
Subject Length Description Subject Range Query Range Score Percent Strand
mura-RA 3869 mura-RA 68..3816 1..3749 18745 100 Plus
mura.d 5854 mura.d 68..3816 1..3749 18745 100 Plus
mura.g 5487 mura.g 68..3816 1..3749 18745 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:00:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 5363986..5365113 3749..2613 5470 98.9 Minus
chr3R 27901430 chr3R 5366407..5366989 1854..1272 2900 99.8 Minus
chr3R 27901430 chr3R 5372633..5373207 589..15 2875 100 Minus
chr3R 27901430 chr3R 5365890..5366351 2315..1854 2310 100 Minus
chr3R 27901430 chr3R 5367052..5367402 1271..921 1740 99.7 Minus
chr3R 27901430 chr3R 5367502..5367837 920..585 1665 99.7 Minus
chr3R 27901430 chr3R 5365641..5365826 2500..2315 930 100 Minus
chr3R 27901430 chr3R 5365186..5365299 2612..2499 570 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 19:23:30 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 9538154..9539290 3749..2613 5685 100 Minus
3R 32079331 3R 9540584..9541166 1854..1272 2915 100 Minus
3R 32079331 3R 9546798..9547372 589..15 2875 100 Minus
3R 32079331 3R 9540067..9540528 2315..1854 2310 100 Minus
3R 32079331 3R 9541229..9541579 1271..921 1755 100 Minus
3R 32079331 3R 9541679..9542014 920..585 1665 99.7 Minus
3R 32079331 3R 9539818..9540003 2500..2315 930 100 Minus
3R 32079331 3R 9539363..9539476 2612..2499 570 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:47:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 9278985..9280121 3749..2613 5685 100 Minus
3R 31820162 3R 9281415..9281997 1854..1272 2915 100 Minus
3R 31820162 3R 9287629..9288203 589..15 2875 100 Minus
3R 31820162 3R 9280898..9281359 2315..1854 2310 100 Minus
3R 31820162 3R 9282060..9282410 1271..921 1755 100 Minus
3R 31820162 3R 9282510..9282845 920..585 1665 99.7 Minus
3R 31820162 3R 9280649..9280834 2500..2315 930 100 Minus
3R 31820162 3R 9280194..9280307 2612..2499 570 100 Minus
Blast to na_te.dros performed 2019-03-15 16:00:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2179..2401 333..570 274 62.8 Plus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 645..728 250..171 141 65.5 Minus
Dmer\R1A3 3772 Dmer\R1A3 MERCR1A3 3772bp 620..736 1923..1810 118 58.1 Minus

LD30050.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:01:41 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 5363986..5365113 2613..3749 98 <- Minus
chr3R 5365186..5365298 2500..2612 100 <- Minus
chr3R 5365642..5365826 2315..2499 100 <- Minus
chr3R 5365891..5366350 1855..2314 100 <- Minus
chr3R 5366407..5366865 1396..1854 99 == Minus
chr3R 5366931..5366989 1272..1330 100 <- Minus
chr3R 5367052..5367402 921..1271 99 <- Minus
chr3R 5367502..5367832 590..920 100 <- Minus
chr3R 5372633..5372651 571..589 100 == Minus
chr3R 5372748..5372793 429..474 100 == Minus
chr3R 5372869..5373021 201..353 100 == Minus
chr3R 5373131..5373205 17..91 100 <- Minus
chr3R 5377598..5377613 1..16 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:49:45 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RB 1..2607 201..2807 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 18:21:32 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RB 1..2607 201..2807 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:48:42 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RA 1..2607 201..2807 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:58:40 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RB 1..2607 201..2807 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:23:17 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RA 1..2607 201..2807 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:49:44 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RA 26..3774 1..3749 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 18:21:32 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RA 26..3774 1..3749 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:48:42 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RA 26..3774 1..3749 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:58:40 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RA 26..3774 1..3749 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:23:17 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
mura-RA 26..3774 1..3749 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:01:41 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9541679..9542009 590..920 100 <- Minus
3R 9538154..9539290 2613..3749 100 <- Minus
3R 9539363..9539475 2500..2612 100 <- Minus
3R 9539819..9540003 2315..2499 100 <- Minus
3R 9540068..9540527 1855..2314 100 <- Minus
3R 9540584..9541166 1272..1854 100 <- Minus
3R 9541229..9541579 921..1271 100 <- Minus
3R 9546798..9547370 17..589 100 <- Minus
3R 9551766..9551781 1..16 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:01:41 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9541679..9542009 590..920 100 <- Minus
3R 9538154..9539290 2613..3749 100 <- Minus
3R 9539363..9539475 2500..2612 100 <- Minus
3R 9539819..9540003 2315..2499 100 <- Minus
3R 9540068..9540527 1855..2314 100 <- Minus
3R 9540584..9541166 1272..1854 100 <- Minus
3R 9541229..9541579 921..1271 100 <- Minus
3R 9546798..9547370 17..589 100 <- Minus
3R 9551766..9551781 1..16 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:01:41 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9541679..9542009 590..920 100 <- Minus
3R 9538154..9539290 2613..3749 100 <- Minus
3R 9539363..9539475 2500..2612 100 <- Minus
3R 9539819..9540003 2315..2499 100 <- Minus
3R 9540068..9540527 1855..2314 100 <- Minus
3R 9540584..9541166 1272..1854 100 <- Minus
3R 9541229..9541579 921..1271 100 <- Minus
3R 9546798..9547370 17..589 100 <- Minus
3R 9551766..9551781 1..16 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:48:42 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 5363876..5365012 2613..3749 100 <- Minus
arm_3R 5365085..5365197 2500..2612 100 <- Minus
arm_3R 5365541..5365725 2315..2499 100 <- Minus
arm_3R 5365790..5366249 1855..2314 100 <- Minus
arm_3R 5366306..5366888 1272..1854 100 <- Minus
arm_3R 5366951..5367301 921..1271 100 <- Minus
arm_3R 5367401..5367731 590..920 100 <- Minus
arm_3R 5372520..5373092 17..589 100 <- Minus
arm_3R 5377488..5377503 1..16 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:31:19 Download gff for LD30050.complete
Subject Subject Range Query Range Percent Splice Strand
3R 9282060..9282410 921..1271 100 <- Minus
3R 9278985..9280121 2613..3749 100 <- Minus
3R 9280194..9280306 2500..2612 100 <- Minus
3R 9280650..9280834 2315..2499 100 <- Minus
3R 9280899..9281358 1855..2314 100 <- Minus
3R 9281415..9281997 1272..1854 100 <- Minus
3R 9282510..9282840 590..920 100 <- Minus
3R 9287629..9288201 17..589 100 <- Minus
3R 9292597..9292612 1..16 100   Minus

LD30050.pep Sequence

Translation from 200 to 2806

> LD30050.pep
MLNSNATGGNNHGGSSRRPFTRNSSSVRSQRGGGGGLGGRMVYSPHTHPH
VQQQQQQQQQQQQQGQQRSSNNGNNNLWLGNSPWCNVNLNGGNSGNNNNN
GGNNNNNNGGNISSNNNSNNVNNKDANPNCHSQGQGPGNSPNLGHNHQRG
YNNGNNNRGIGNGIVNGNTNGPPDYMNYRRGVCPAQSRDYSGNGNGNNNG
HGHNGRRYMSDNLNNPSSSMNGLINSGHHQRNYNDRNLNNHFGNSEQNGG
PDHRDRAEGSSYNFMRNGGGSGGGGYGRNGSHYQHMAYGNNNGASTSTGG
PGLMGELPSGSGLSGSSLSLNNGPGGLNSDSPSRKRRRISGRPPNGPQPQ
HRCPMAHMQQGSPPLRRPRLRDVATSTQQQQQQYGHQVHHPQQQQQQPPS
NYHPMHHHQPQPHYVPQQQVPPPHVQRSPWDLGSSGGSSGGATSSSSVGP
ILQQVQAPPQPPSHQQAVGYPQAPPQPASLMVDLNLNQVPVNLQLRPSEP
FWASFCTYPIPAQARLAPCHLHGVYTQPFPAAPPPGLAAPPLQQQHQPLI
QAQQMISQATLTAQQQQRDVVAIATANLGPIEAPGAHGHPHAHPHAHPHA
HQLPPGIHITPLSGAAAAAATHHLHSTAAAAAAVAAGAQITTAQQILFSS
DRRTFPPHRRIPRFWTANHGHRHVLPPQSLAAHQAPVQIQATSGIINPGF
LLNFLAMFPLSPYNQHDLSSGDTNETENYEALLSLAERLGEAKPRGLTRN
EIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVD
KWLRSNRTCPICRGNASDYFDGVDQQQQSQATAGAAAALSGTSGGSAGVA
GTSEASAATANPQQSQAA*

LD30050.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:46:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16054-PA 854 GF16054-PA 21..854 27..868 1959 70.5 Plus
Dana\GF16619-PA 1226 GF16619-PA 1110..1226 733..839 181 35.6 Plus
Dana\GF18360-PA 547 GF18360-PA 212..279 747..813 166 41.2 Plus
Dana\GF16575-PA 376 GF16575-PA 224..331 747..862 164 33.6 Plus
Dana\GF11510-PA 628 GF11510-PA 277..351 747..820 160 32.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17363-PA 887 GG17363-PA 22..887 17..868 2802 91.6 Plus
Dere\GG17197-PA 1251 GG17197-PA 1133..1251 731..839 178 35.8 Plus
Dere\GG13423-PA 538 GG13423-PA 211..278 747..813 168 41.2 Plus
Dere\GG14428-PA 381 GG14428-PA 229..344 747..866 158 30 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:46:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19305-PA 885 GH19305-PA 192..885 281..868 1473 59.4 Plus
Dgri\GH17353-PA 1665 GH17353-PA 1557..1644 739..820 169 37.1 Plus
Dgri\GH23135-PA 745 GH23135-PA 278..364 746..829 168 33 Plus
Dgri\GH19534-PA 534 GH19534-PA 199..266 747..813 159 38.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:09:47
Subject Length Description Subject Range Query Range Score Percent Strand
mura-PB 868 CG9381-PB 1..868 1..868 4757 100 Plus
mura-PA 868 CG9381-PA 1..868 1..868 4757 100 Plus
mura-PC 1173 CG9381-PC 344..1173 43..868 4088 91.1 Plus
mura-PC 1173 CG9381-PC 1..446 1..474 799 41.6 Plus
glo-PA 586 CG6946-PA 221..475 20..312 227 29.6 Plus
glo-PB 586 CG6946-PB 221..475 20..312 227 29.6 Plus
mam-PD 1594 CG8118-PD 270..867 3..469 218 24.1 Plus
mam-PB 1594 CG8118-PB 270..867 3..469 218 24.1 Plus
mam-PA 1594 CG8118-PA 270..867 3..469 218 24.1 Plus
CG15040-PA 1895 CG15040-PA 1556..1889 2..340 194 20.9 Plus
glo-PA 586 CG6946-PA 275..578 8..280 190 27.6 Plus
glo-PB 586 CG6946-PB 275..578 8..280 190 27.6 Plus
CG5787-PB 950 CG5787-PB 8..334 10..330 187 26.1 Plus
CG5787-PA 950 CG5787-PA 8..334 10..330 187 26.1 Plus
CG42389-PE 2064 CG42389-PE 568..776 372..604 187 29.8 Plus
pnt-PC 623 CG17077-PC 234..446 46..282 184 28 Plus
pnt-PE 625 CG17077-PE 236..448 46..282 184 28 Plus
pnt-PD 636 CG17077-PD 247..459 46..282 184 28 Plus
pnt-PB 718 CG17077-PB 329..541 46..282 184 28 Plus
CG5787-PB 950 CG5787-PB 207..653 3..489 181 24 Plus
CG5787-PA 950 CG5787-PA 207..653 3..489 181 24 Plus
Capr-PB 961 CG18811-PB 663..952 43..335 181 28.1 Plus
Capr-PA 961 CG18811-PA 663..952 43..335 181 28.1 Plus
nonA-PC 698 CG4211-PC 6..257 53..326 179 28.4 Plus
nonA-PD 700 CG4211-PD 6..257 53..326 179 28.4 Plus
nonA-PA 700 CG4211-PA 6..257 53..326 179 28.4 Plus
nonA-PB 742 CG4211-PB 6..257 53..326 179 28.4 Plus
Pdp1-PL 581 CG17888-PL 170..451 50..336 178 26.1 Plus
godzilla-PD 536 CG10277-PD 210..343 747..860 177 30.6 Plus
godzilla-PC 536 CG10277-PC 210..343 747..860 177 30.6 Plus
godzilla-PB 536 CG10277-PB 210..343 747..860 177 30.6 Plus
godzilla-PA 536 CG10277-PA 210..343 747..860 177 30.6 Plus
oc-PE 539 CG12154-PE 120..519 56..454 177 23.4 Plus
oc-PD 542 CG12154-PD 123..522 56..454 177 23.4 Plus
oc-PG 542 CG12154-PG 123..522 56..454 177 23.4 Plus
oc-PC 542 CG12154-PC 123..522 56..454 177 23.4 Plus
oc-PF 548 CG12154-PF 129..528 56..454 177 23.4 Plus
Mur89F-PC 2158 CG4090-PC 605..959 3..345 177 21.8 Plus
Mur89F-PB 2159 CG4090-PB 605..959 3..345 177 21.8 Plus
Mur89F-PC 2158 CG4090-PC 557..1018 61..500 175 21.1 Plus
Mur89F-PB 2159 CG4090-PB 557..1018 61..500 175 21.1 Plus
CG42389-PF 1762 CG31738-PB 196..474 267..604 175 25.4 Plus
CG11982-PA 380 CG11982-PA 226..350 744..867 174 31 Plus
Tlk-PL 1011 CG34412-PL 103..568 46..480 174 24.7 Plus
Tlk-PN 1242 CG34412-PN 79..544 46..480 174 24.7 Plus
Tlk-PM 1242 CG34412-PM 79..544 46..480 174 24.7 Plus
Tlk-PI 1242 CG34412-PI 79..544 46..480 174 24.7 Plus
Tlk-PC 1254 CG32782-PC 91..556 46..480 174 24.7 Plus
Tlk-PE 1255 CG34412-PE 92..557 46..480 174 24.7 Plus
Tlk-PK 1265 CG34412-PK 102..567 46..480 174 24.7 Plus
Tlk-PJ 1266 CG34412-PJ 103..568 46..480 174 24.7 Plus
Tlk-PH 1266 CG34412-PH 103..568 46..480 174 24.7 Plus
Tlk-PF 1266 CG34412-PF 103..568 46..480 174 24.7 Plus
Tlk-PB 1463 CG34412-PB 300..765 46..480 174 24.7 Plus
Tlk-PG 1489 CG34412-PG 326..791 46..480 174 24.7 Plus
glo-PA 586 CG6946-PA 251..453 91..331 173 28.2 Plus
glo-PB 586 CG6946-PB 251..453 91..331 173 28.2 Plus
CG15040-PA 1895 CG15040-PA 1475..1685 54..267 173 26.4 Plus
nonA-PC 698 CG4211-PC 56..267 49..280 173 27.5 Plus
nonA-PD 700 CG4211-PD 56..267 49..280 173 27.5 Plus
nonA-PA 700 CG4211-PA 56..267 49..280 173 27.5 Plus
nonA-PB 742 CG4211-PB 56..267 49..280 173 27.5 Plus
CG15040-PA 1895 CG15040-PA 1481..1792 46..348 171 20.6 Plus
pnt-PC 623 CG17077-PC 117..487 48..358 171 23.7 Plus
NAT1-PD 1488 CG3845-PD 61..447 13..378 171 23.7 Plus
NAT1-PD 1488 CG3845-PD 148..491 4..347 171 24 Plus
Pdp1-PC 570 CG17888-PC 170..317 50..208 168 30.6 Plus
pnt-PE 625 CG17077-PE 117..489 48..358 167 24.2 Plus
CG17108-PA 342 CG17108-PA 13..310 1..326 167 26.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:46:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22448-PA 1503 GI22448-PA 1390..1477 739..820 169 37.1 Plus
Dmoj\GI23012-PA 544 GI23012-PA 216..283 747..813 160 38.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:46:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21484-PA 636 GL21484-PA 187..536 172..527 724 65 Plus
Dper\GL21484-PA 636 GL21484-PA 539..636 768..868 368 72.8 Plus
Dper\GL12252-PA 1345 GL12252-PA 1231..1345 733..839 186 37.1 Plus
Dper\GL16830-PA 737 GL16830-PA 277..362 747..829 163 33.3 Plus
Dper\GL12113-PA 362 GL12113-PA 218..335 747..855 159 29.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:46:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26288-PA 890 GA26288-PA 28..890 17..868 1963 67.1 Plus
Dpse\GA26288-PB 1224 GA26288-PB 526..1224 172..868 1927 73.5 Plus
Dpse\GA19959-PA 1343 GA19959-PA 1229..1343 733..839 186 37.1 Plus
Dpse\GA10212-PB 503 GA10212-PB 198..265 747..813 160 39.7 Plus
Dpse\GA11309-PA 362 GA11309-PA 218..335 747..855 159 29.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:46:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26248-PA 872 GM26248-PA 1..872 1..868 4340 97 Plus
Dsec\GM26076-PA 1257 GM26076-PA 1136..1233 731..820 174 38.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:46:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20788-PA 877 GD20788-PA 1..877 1..868 4347 96.8 Plus
Dsim\GD19873-PA 537 GD19873-PA 210..277 747..813 167 41.2 Plus
Dsim\GD18588-PA 379 GD18588-PA 229..345 747..861 155 32.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:46:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10273-PA 1174 GJ10273-PA 457..1174 173..868 1695 63.5 Plus
Dvir\GJ11010-PA 1477 GJ11010-PA 1363..1450 739..820 169 37.1 Plus
Dvir\GJ21338-PA 743 GJ21338-PA 277..362 747..829 168 33.3 Plus
Dvir\GJ24605-PA 544 GJ24605-PA 213..280 747..813 160 38.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:46:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11818-PA 846 GK11818-PA 28..846 38..868 1634 60.4 Plus
Dwil\GK10924-PA 1411 GK10924-PA 1291..1386 733..820 175 38.1 Plus
Dwil\GK12779-PA 545 GK12779-PA 211..278 747..813 161 38.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24768-PA 1040 GE24768-PA 288..1040 128..868 2592 92.8 Plus
Dyak\GE10089-PA 1259 GE10089-PA 1141..1259 731..839 178 35.8 Plus
Dyak\GE25922-PA 380 GE25922-PA 229..339 747..862 163 31 Plus
Dyak\GE10219-PA 537 GE10219-PA 211..277 747..813 156 41.2 Plus

LD30050.hyp Sequence

Translation from 200 to 2806

> LD30050.hyp
MLNSNATGGNNHGGSSRRPFTRNSSSVRSQRGGGGGLGGRMVYSPHTHPH
VQQQQQQQQQQQQQGQQRSSNNGNNNLWLGNSPWCNVNLNGGNSGNNNNN
GGNNNNNNGGNISSNNNSNNVNNKDANPNCHSQGQGPGNSPNLGHNHQRG
YNNGNNNRGIGNGIVNGNTNGPPDYMNYRRGVCPAQSRDYSGNGNGNNNG
HGHNGRRYMSDNLNNPSSSMNGLINSGHHQRNYNDRNLNNHFGNSEQNGG
PDHRDRAEGSSYNFMRNGGGSGGGGYGRNGSHYQHMAYGNNNGASTSTGG
PGLMGELPSGSGLSGSSLSLNNGPGGLNSDSPSRKRRRISGRPPNGPQPQ
HRCPMAHMQQGSPPLRRPRLRDVATSTQQQQQQYGHQVHHPQQQQQQPPS
NYHPMHHHQPQPHYVPQQQVPPPHVQRSPWDLGSSGGSSGGATSSSSVGP
ILQQVQAPPQPPSHQQAVGYPQAPPQPASLMVDLNLNQVPVNLQLRPSEP
FWASFCTYPIPAQARLAPCHLHGVYTQPFPAAPPPGLAAPPLQQQHQPLI
QAQQMISQATLTAQQQQRDVVAIATANLGPIEAPGAHGHPHAHPHAHPHA
HQLPPGIHITPLSGAAAAAATHHLHSTAAAAAAVAAGAQITTAQQILFSS
DRRTFPPHRRIPRFWTANHGHRHVLPPQSLAAHQAPVQIQATSGIINPGF
LLNFLAMFPLSPYNQHDLSSGDTNETENYEALLSLAERLGEAKPRGLTRN
EIDQLPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVD
KWLRSNRTCPICRGNASDYFDGVDQQQQSQATAGAAAALSGTSGGSAGVA
GTSEASAATANPQQSQAA*

LD30050.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 14:02:26
Subject Length Description Subject Range Query Range Score Percent Strand
mura-PB 868 CG9381-PB 1..868 1..868 4757 100 Plus
mura-PA 868 CG9381-PA 1..868 1..868 4757 100 Plus
mura-PC 1173 CG9381-PC 344..1173 43..868 4088 91.1 Plus
mura-PC 1173 CG9381-PC 1..446 1..474 799 41.6 Plus
glo-PA 586 CG6946-PA 221..475 20..312 227 29.6 Plus
glo-PB 586 CG6946-PB 221..475 20..312 227 29.6 Plus
glo-PA 586 CG6946-PA 275..578 8..280 190 27.6 Plus
glo-PA 586 CG6946-PA 251..453 91..331 173 28.2 Plus