BDGP Sequence Production Resources |
Search the DGRC for LD30155
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 301 |
Well: | 55 |
Vector: | pOT2 |
Associated Gene/Transcript | lost-RA |
Protein status: | LD30155.pep: gold |
Preliminary Size: | 2993 |
Sequenced Size: | 2693 |
Gene | Date | Evidence |
---|---|---|
CG14648 | 2001-01-01 | Release 2 assignment |
CG14648 | 2001-09-19 | Blastp of sequenced clone |
CG14648 | 2003-01-01 | Sim4 clustering to Release 3 |
growl | 2008-04-29 | Release 5.5 accounting |
growl | 2008-08-15 | Release 5.9 accounting |
growl | 2008-12-18 | 5.12 accounting |
2693 bp (2693 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058608
> LD30155.complete GAGAACGGTAGACGTTGCTTGTGAACTGTGAACTGTGTAGCCGTAGCCTG AGCCGGTAAAAAATTGTGAGCAGAACTAAAACACAATTGGCGAGCGATTC GATGGAGGACCAAAGCAACGCAGCCCCCGCTGTCGCCGCGGAGAACGGCG GAAACACCGCGCAGGAGGTGTCTTCGACAACTCAGCCCATAGAGCCCACA AAGCGCTCGCTGCGCGTGCAGACCTGGAAAAAGATCCAAGAGGGCAAGGT TGGCATTGGATTCAACAACATATTTAACCGAATTCCTTCGTTCGTGGGTG CCGATAAGGCTGCTGCCTTGTTTGCCAATGAAGAGGAGTTCAAGAAAGCA CAGCACATCAAGGTGAACATCGATCGCGTCTTGCATGAGTTTAAGGAACT GGCATTGCTGGCCGACAAGTCCGTATACTTGCCCAGCACCCGCGAATCTT CTGCACTGTGCCTAAAGGTAGATGTGCTGGCCGATGCCACCGAGGAGCAG AAAAAGGAGGCTCTGCGCGTTCAAGATATTCAAAAGTTTCGCTCGGAAAT TGGATTGGACAGCGGTCTGAAGCTGGACATCGTGGTTATTGGCTCTGTTG TAGTGTCACGCGAGGGTTACCGCATTGGACGCGGAAATGGTTTCGCTGAT CTGGACATCGGCCTCCTTATTGAACTGGGAGCCATTACACCGAAGACAAT TATTGTCACAATCGTGCACGACATGCAGGTGGTGGACTCACTGCCCCCGA ATCTATTCCAGAAGTACGATACGCCAGTTGATATCATTGCAACACCCACA GAAATAATCAGGGTGCCAAAGCGCTTGTCTTTCCCCAATGGCGTTTACTG GGAGCTGCTGTCCGAGCGCCGTCTAAAAATATTGCCCGTGCTGCAGCAGC TTAAGGAAAGGGAGGAGAAGGCGGGAAAATCCATATCCCTCAAGGAGGAA GACACCGATGTGGAGCAACATCAAAACAACAGACGCCGCCGTGGGCCTGT GCGCCGGCGCATCCAACGAGGAAACCCAGGTCGCACCACTTCGCAGACTG ACAACGAACAGCCGCAGGGCGAGACTGCTCAGAAACGCACTCCGCGGCGC AAAGGTCGTTTCGTCAATCGCCGCAGACGTACAACTAAGTCTGAGGGCGA TCAGTCTGGTGTGGAAGCAGGTGCTAAAACTGATGATCGTAAGTTACCAG AGGCTGGCACTGATGAGCGTCGTTCAAAGAAGAACAAGAACAGTGATTTT TGCATTAAGTTGACAAATCTGTCTCGTGATATTCGCGTCAAGGACTTAAA GTCGGAGCTCCGCAAACGCGAATGCACTCCGATGTCAATTTCTTGGAAGG GACACTTCGGAAAGTGTTTCCTGCACTTTGGAAACCGCAAGGGGGTTCCC AGTACCCAGGACGACATGGACAAGGTGTTGAAGTCTCTCAACGATCTCTC GCTCACCATTACCACTGGTGGCGAGACAGCCCCAGCTGCCGCCGCAGGGG AGGGCGGTGAGAAAGCAGAGTCAGCTGAGACTGCAACGCCTGTGCAGACC AAGACTATTCTCGTCAACGTAGAACTGATCCAATTTGGCGAGAAGAAAAG TGCTAGCTCCACTGGTGCCAATGCCGGTGCAGGCGAGGATGGAAAAGCAG ACGCGCAAAACGGAGGGGAGGCCGTAACTGTGGCAGGAGGCGACGTGGGT GGTGCACGCATCGAAGCTGTCGACACCACCACAGTATAGTATGACTTTGC GCTTGGCGCAGCCAATGAACGGTCGCGGCGGACTTCCGCCGACAGCGCAA TGTTTGGAGTTCAACGAAAAAAAGTAACATTTTGTTTAGAAAAAATCGGG AAATACCAAACAAAAAACAAATAGAAAGCGAACTCCGAACAAACACAAAG TACACTCAAAATACACACTCACTAAATACACGCTGGCAATTACACTTGTG CATACACTGAATATCATGTTTTGCAGCTTGTAGTTTCTTCTTCTCCGTCA TTATTCTAACCAACAAGAAAATCAAACGCAACTCTTTCTAACGAGAACAC AAATCATTGACGCTTTTTCTAAACAATTGCATTTGTTTTTTGCCTAAGAA AATTAAAACGATTGCAGAAATACTCGTTCCACAAATGCAAAGTGGAACAC CATTTCTTCTAAATAATCCTTTTACTAACTTCTTGTGACTTGTTACAATT CTGAATTAGAACTTCTGAATATTTGTTAATTTGATTTCACACCTCAGCAA TAAGATCGTTTTGCTGTATCTCTGTTAAGCAGTTGAGCTGCTAGTAATAG GGCTTGAAGTTGAGTGCGTTGAAGTTGAAGTAATGTTCTAAAATGTAATA CTAATAGGAATGCCCTATAAATGAGAAATACCGCGAGTAAGAAAAAATGA ATTAACAAAATATTTACATGTTGCATTTGGTTAGTCTTTTCCAACTTTCA CCGCAAACATCAATAAATTTAATAATATTTTTAACAGAAGAACAAGAAAT GTGTGAAAGCAAGAATTATACAATGCAGAACATAATTATACAAGGCAGAA CATAATTATTTACCCTTTTTTTATACACAAAAGGCATTACAAAAAAAAAA TATGAAACATGAATGAAATATAACTTGAAATAAAAATTAAAAAAATCGTA AAAATAAACTTGACCGAAAATTAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 231585..232907 | 1350..2672 | 6615 | 100 | Plus |
chr3R | 27901430 | chr3R | 230416..231139 | 348..1071 | 3605 | 99.9 | Plus |
chr3R | 27901430 | chr3R | 231318..231531 | 1138..1351 | 1070 | 100 | Plus |
chr3R | 27901430 | chr3R | 228820..228999 | 1..180 | 900 | 100 | Plus |
chr3R | 27901430 | chr3R | 230184..230358 | 177..351 | 860 | 99.4 | Plus |
chr3R | 27901430 | chr3R | 231199..231267 | 1071..1139 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 4405866..4407189 | 1350..2673 | 6620 | 100 | Plus |
3R | 32079331 | 3R | 4404697..4405420 | 348..1071 | 3605 | 99.9 | Plus |
3R | 32079331 | 3R | 4405599..4405812 | 1138..1351 | 1070 | 100 | Plus |
3R | 32079331 | 3R | 4403101..4403280 | 1..180 | 900 | 100 | Plus |
3R | 32079331 | 3R | 4404465..4404639 | 177..351 | 860 | 99.4 | Plus |
3R | 32079331 | 3R | 4405480..4405548 | 1071..1139 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 4146697..4148020 | 1350..2673 | 6620 | 100 | Plus |
3R | 31820162 | 3R | 4145528..4146251 | 348..1071 | 3605 | 99.8 | Plus |
3R | 31820162 | 3R | 4146430..4146643 | 1138..1351 | 1070 | 100 | Plus |
3R | 31820162 | 3R | 4143932..4144111 | 1..180 | 900 | 100 | Plus |
3R | 31820162 | 3R | 4145296..4145470 | 177..351 | 860 | 99.4 | Plus |
3R | 31820162 | 3R | 4146311..4146379 | 1071..1139 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
1360 | 3409 | 1360 1360 3409bp | 2370..2633 | 2366..2646 | 152 | 54.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 230188..230358 | 181..351 | 100 | -> | Plus |
chr3R | 228820..228999 | 1..180 | 100 | -> | Plus |
chr3R | 230420..231138 | 352..1070 | 100 | -> | Plus |
chr3R | 231199..231267 | 1071..1139 | 100 | -> | Plus |
chr3R | 231320..231530 | 1140..1350 | 100 | -> | Plus |
chr3R | 231586..232825 | 1351..2590 | 98 | == | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
growl-RA | 1..1638 | 102..1739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
growl-RA | 1..1638 | 102..1739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lost-RA | 1..1638 | 102..1739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
growl-RA | 1..1638 | 102..1739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lost-RA | 1..1638 | 102..1739 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
growl-RA | 53..2724 | 1..2672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
growl-RA | 53..2724 | 1..2672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lost-RA | 53..2724 | 1..2672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
growl-RA | 53..2724 | 1..2672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lost-RA | 26..2691 | 1..2666 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4403101..4403280 | 1..180 | 100 | -> | Plus |
3R | 4404469..4404639 | 181..351 | 100 | -> | Plus |
3R | 4404701..4405419 | 352..1070 | 100 | -> | Plus |
3R | 4405480..4405548 | 1071..1139 | 100 | -> | Plus |
3R | 4405601..4405811 | 1140..1350 | 100 | -> | Plus |
3R | 4405867..4407188 | 1351..2672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4403101..4403280 | 1..180 | 100 | -> | Plus |
3R | 4404469..4404639 | 181..351 | 100 | -> | Plus |
3R | 4404701..4405419 | 352..1070 | 100 | -> | Plus |
3R | 4405480..4405548 | 1071..1139 | 100 | -> | Plus |
3R | 4405601..4405811 | 1140..1350 | 100 | -> | Plus |
3R | 4405867..4407188 | 1351..2672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4403101..4403280 | 1..180 | 100 | -> | Plus |
3R | 4404469..4404639 | 181..351 | 100 | -> | Plus |
3R | 4404701..4405419 | 352..1070 | 100 | -> | Plus |
3R | 4405480..4405548 | 1071..1139 | 100 | -> | Plus |
3R | 4405601..4405811 | 1140..1350 | 100 | -> | Plus |
3R | 4405867..4407188 | 1351..2672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 228823..229002 | 1..180 | 100 | -> | Plus |
arm_3R | 230191..230361 | 181..351 | 100 | -> | Plus |
arm_3R | 230423..231141 | 352..1070 | 100 | -> | Plus |
arm_3R | 231202..231270 | 1071..1139 | 100 | -> | Plus |
arm_3R | 231323..231533 | 1140..1350 | 100 | -> | Plus |
arm_3R | 231589..232910 | 1351..2672 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 4146432..4146642 | 1140..1350 | 100 | -> | Plus |
3R | 4146698..4148019 | 1351..2672 | 100 | Plus | |
3R | 4145532..4146250 | 352..1070 | 100 | -> | Plus |
3R | 4146311..4146379 | 1071..1139 | 100 | -> | Plus |
3R | 4143932..4144111 | 1..180 | 100 | -> | Plus |
3R | 4145300..4145470 | 181..351 | 100 | -> | Plus |
Translation from 101 to 1738
> LD30155.pep MEDQSNAAPAVAAENGGNTAQEVSSTTQPIEPTKRSLRVQTWKKIQEGKV GIGFNNIFNRIPSFVGADKAAALFANEEEFKKAQHIKVNIDRVLHEFKEL ALLADKSVYLPSTRESSALCLKVDVLADATEEQKKEALRVQDIQKFRSEI GLDSGLKLDIVVIGSVVVSREGYRIGRGNGFADLDIGLLIELGAITPKTI IVTIVHDMQVVDSLPPNLFQKYDTPVDIIATPTEIIRVPKRLSFPNGVYW ELLSERRLKILPVLQQLKEREEKAGKSISLKEEDTDVEQHQNNRRRRGPV RRRIQRGNPGRTTSQTDNEQPQGETAQKRTPRRKGRFVNRRRRTTKSEGD QSGVEAGAKTDDRKLPEAGTDERRSKKNKNSDFCIKLTNLSRDIRVKDLK SELRKRECTPMSISWKGHFGKCFLHFGNRKGVPSTQDDMDKVLKSLNDLS LTITTGGETAPAAAAGEGGEKAESAETATPVQTKTILVNVELIQFGEKKS ASSTGANAGAGEDGKADAQNGGEAVTVAGGDVGGARIEAVDTTTV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18214-PA | 555 | GF18214-PA | 22..555 | 21..545 | 2212 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12395-PA | 548 | GG12395-PA | 1..548 | 1..545 | 2436 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19050-PA | 554 | GH19050-PA | 1..554 | 1..545 | 1972 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lost-PA | 545 | CG14648-PA | 1..545 | 1..545 | 2759 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24343-PA | 533 | GI24343-PA | 1..533 | 1..545 | 2077 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21466-PA | 553 | GL21466-PA | 23..553 | 21..545 | 2048 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13146-PA | 553 | GA13146-PA | 23..553 | 21..545 | 2045 | 78.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10754-PA | 545 | GM10754-PA | 1..545 | 1..545 | 2797 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19729-PA | 545 | GD19729-PA | 1..545 | 1..545 | 2798 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10429-PA | 534 | GJ10429-PA | 1..534 | 1..545 | 2015 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13534-PA | 561 | GK13534-PA | 1..561 | 1..545 | 2029 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25416-PA | 548 | GE25416-PA | 1..548 | 1..545 | 2499 | 91.4 | Plus |
Translation from 101 to 1738
> LD30155.hyp MEDQSNAAPAVAAENGGNTAQEVSSTTQPIEPTKRSLRVQTWKKIQEGKV GIGFNNIFNRIPSFVGADKAAALFANEEEFKKAQHIKVNIDRVLHEFKEL ALLADKSVYLPSTRESSALCLKVDVLADATEEQKKEALRVQDIQKFRSEI GLDSGLKLDIVVIGSVVVSREGYRIGRGNGFADLDIGLLIELGAITPKTI IVTIVHDMQVVDSLPPNLFQKYDTPVDIIATPTEIIRVPKRLSFPNGVYW ELLSERRLKILPVLQQLKEREEKAGKSISLKEEDTDVEQHQNNRRRRGPV RRRIQRGNPGRTTSQTDNEQPQGETAQKRTPRRKGRFVNRRRRTTKSEGD QSGVEAGAKTDDRKLPEAGTDERRSKKNKNSDFCIKLTNLSRDIRVKDLK SELRKRECTPMSISWKGHFGKCFLHFGNRKGVPSTQDDMDKVLKSLNDLS LTITTGGETAPAAAAGEGGEKAESAETATPVQTKTILVNVELIQFGEKKS ASSTGANAGAGEDGKADAQNGGEAVTVAGGDVGGARIEAVDTTTV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lost-PA | 545 | CG14648-PA | 1..545 | 1..545 | 2759 | 100 | Plus |