BDGP Sequence Production Resources |
Search the DGRC for LD30157
Library: | LD |
Tissue Source: | Drosophila melanogaster embryo |
Created by: | Ling Hong |
Date Registered: | 1997-12-04 |
Comments: | Constructed using Stratagene ZAP-cDNA Synthesis kit. Oligo dT-primed and directionally cloned at EcoRI and XhoI in BlueScript SK(+/-) |
Original Plate Number: | 301 |
Well: | 57 |
Vector: | pOT2 |
Associated Gene/Transcript | msk-RA |
Protein status: | LD30157.pep: validated not full length |
Preliminary Size: | 2874 |
Sequenced Size: | 2851 |
Gene | Date | Evidence |
---|---|---|
CG7935 | 2001-10-10 | Blastp of sequenced clone |
msk | 2008-04-29 | Release 5.5 accounting |
msk | 2008-08-15 | Release 5.9 accounting |
msk | 2008-12-18 | 5.12 accounting |
2851 bp (2851 high quality bases) assembled on 2001-10-10
GenBank Submission: AY061378
> LD30157.complete CCCACGTTTAGCCAGGGCGTGCTGGAGGTGCTCCTCAAGATCCTCGACCA GTACCGAAACAGAGTCTACGTCTCACCACGCGTCCTCACTGATGTGCTCA ACTATCTGAAGAATGCGGTTAGCCACGCCTACACCTGGAAGCTGATTAAG CCTCACATGGTGGCTGTCATCCAGGACGTGATCTTTCCCATCATGTCGTT TACTGACTCCGATCAGGAGCTCTGGGAAAGCGATCCCTACGAGTACATTC GCCTTAAGTTCGATATCTTTGAGGATTATGCCACACCTGTACCGGCAGCC CAATCTCTGCTGCATTCTATGTGCAAAAAGCGCAAGGGCATTTTGCCCAA GGCAATGGCCACAATTATGCAGATAATTACATCGCCGAATGCGGACAACA AACAGAAAGATGGTGCCTTGCACATGATTGGAACGCTGGCGGACGTACTG CTGAAGAAGGCTTCGTACCGCGACCAAGTGGAGTCCATGCTGACCACCTA CGTCTTCCCAGAATTCCAAAATCCCGCGGGCCACATGAGAGCGCGCGCGT GCTGGGTGCTGCACTATTTCTGTGACGTTCAAATCAAGAATCCCCAAGTG CTGGCCGAGATAATGCGTCTGACCACAAACGCCTTGCTTACCGACAAGGA GCTGCCCGTCAAAGTGGAGGCAGCTATCGGTCTGCAGATGTTCATATCGT CCCAGGACGAGGCGCCGCAATACGTGGAGGCACAGATCAAGGAGATCACC AAGGAGCTGCTTACCATCATTCGAGAGACGGAGAACGAAGATCTAACAAA CGTTATGCAAAAGATCGTGTGCACCTTCACCGAGCAATTGCTGCCCGTGG CCACCGAGATCTGCCAGCACCTGGCCACCACCTTCAGCCAGGTCCTAGAA TCTGAGGAGGGATCCGACGAGAAGGCCATCACGGCCATGAGTCTGCTTAA CACTATCGAAACTCTGCTCAGTGTGATGGAAGAGCATCCTGATGTCCTGC TTAACTTGCACCCGATCGTCATTAATGTTGTCGGACACATTTTCCAGCAC AACATAACTGACTTCTATGAGGAAACCTTCTCCCTGGTCTACGACCTGAC AGCCAAGGCCATTTCCCCCGAAATGTGGCAGATGCTGGAGCTCATCTATC AGGTGTTCAAGAAGGACGGTATTGACTACTTTATCGACATTATGCCTGCT CTGCATAACTATGTGACGGTCGACACGCCCGCTTTCCTCTCCAATCCCAA CAGGCTGTTGGCGATTCTCGACATGTGCAAAACGATGCTTACTAGTAGCC CTGGCGAGGATCCCGAGTGCCATGCCGCCAAACTGATGGAAGTGATTATC TTGCAGTGCAAGGGTCAAATCGACTCAGTGATACATATGTTCGTGGAGCT GGCTCTGTCCCGGTTAACACGTGAAGTTCAATCCTCAGAGCTGCGCACTA TGTGCCTGCAAGTGGTAATCGCGGCACTCTACTATAATCCCCAGTTGCTG CTGTCCATTCTGGACAAAATGTCCCAGCAAAACAACGACTCTATCAGCGC GCACTTTATCAAGCAGTGGCTTCACGACACGGACTGTTTCCTAGGCATCC ACGATCGCAAACTTTGCGTCCTGGGTCTGTGCACCCTCATCTCGCTGGGC GAAGCCAAGCCCCAGGTTCTGAGCGAAGTGGCTGGAAAGATTGTGCCCGC ACTTATTTTGCTTTTCGATGGTCTAAAACGCGCCTACGAGTCTCGTGCTC AGGAGGAAGAGGAAGATGAGGAGGAGGAGGACGGTGACGACTGTGAGGAG GCTCTGTCCAGTGACGAGGATGACATGGACGAAATGGCACCGGACTATCT GGATAAATTGGCCGAATTTGCCAAAACCAAGGGCAATGAGTCGGGCTTCG AAGTGAAAGCCGAAATCAAGGACGACGATGCTGACTCGGACGGTGACGCC GAGGAGTCTGTGGGTGATCTGAACGAGACTGGACTGGAGTCGTTTACCAC GCCCATCGACGATGAGGAGAACGAAAGCGCCATCGATGAGTACTGGACGT TTAAGGAAGTTATTACTGCACTTTCTGCACAAGACCAAGCCTGGTATGCG CTGTTGACCTCCAACCTCACACCTGAGCAAGCCAAGGCGCTGCAAGAGGT GGTGGTGACGGCTGACCAACGCAAAGCCGCCAAGGAATCGAAGCTGATCG AGAAGCAAGGTGGCTTCGCCTTTCCGCAGACTGCCGTGCCCACGTCGTTT AAGTTCGGCTCCTAAGAAACTGAATTGACCAGATCACCAGACACTTGGTT CGATTTCTGACTTGATTGTTTCTCATATTCTTTCCAAAAATAACAAAAAC ATCAAACAAAATACATCTGGCATGCTGATGATGGCTTTGAAGGCATTCTC TTGGTTTTCGTACACTCCGTGTACCCATGTATGCTGCGACAATCGGTCGA TTAATCAGATTAAAAAATCGATCGGTCGAGCGGCGACGAGACCGCACTAT ATTTATTGTAGATTTATATTTTATTTCCTATTTTGTGGCCAGGGCGGCCA ACTAAATTATGATAACTTAAGTCCATTGTAAATCTTTGTATGTAAACGAA ACGAAACGAAACGAAAAACAAACACGTCAGGACGAGAAGGTCTCATTAAA TGAGATTGTGCCCACCAGCACGCCCCCGTAGAACTCCAAAAAAAAGTTGG CATCTAGGTCAGAGAATGAGAATTCAACGCAGAGCATTTCACATACATTT TCTTTATACACACATACACGTATATTCTGTACTAAATGAAGCGATATTTT TGAAAAATAAAAAAAAAAAATTTTTAACGTTTGAAAAAAAAAAAAAAAAA A
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 8110792..8111590 | 262..1060 | 3980 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 8112864..8113628 | 2068..2833 | 3780 | 99.9 | Plus |
chr3L | 24539361 | chr3L | 8112327..8112800 | 1595..2068 | 2370 | 100 | Plus |
chr3L | 24539361 | chr3L | 8111961..8112272 | 1284..1595 | 1560 | 100 | Plus |
chr3L | 24539361 | chr3L | 8111652..8111876 | 1060..1284 | 1110 | 99.6 | Plus |
chr3L | 24539361 | chr3L | 8110595..8110740 | 117..262 | 730 | 100 | Plus |
chr3L | 24539361 | chr3L | 8110266..8110382 | 1..117 | 585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 8118744..8119542 | 262..1060 | 3995 | 100 | Plus |
3L | 28110227 | 3L | 8120814..8121581 | 2068..2835 | 3840 | 100 | Plus |
3L | 28110227 | 3L | 8120277..8120750 | 1595..2068 | 2370 | 100 | Plus |
3L | 28110227 | 3L | 8119911..8120222 | 1284..1595 | 1560 | 100 | Plus |
3L | 28110227 | 3L | 8119604..8119828 | 1060..1284 | 1125 | 100 | Plus |
3L | 28110227 | 3L | 8118547..8118692 | 117..262 | 730 | 100 | Plus |
3L | 28110227 | 3L | 8118218..8118334 | 1..117 | 585 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 8111844..8112642 | 262..1060 | 3995 | 100 | Plus |
3L | 28103327 | 3L | 8113914..8114681 | 2068..2835 | 3840 | 100 | Plus |
3L | 28103327 | 3L | 8113377..8113850 | 1595..2068 | 2370 | 100 | Plus |
3L | 28103327 | 3L | 8113011..8113322 | 1284..1595 | 1560 | 100 | Plus |
3L | 28103327 | 3L | 8112704..8112928 | 1060..1284 | 1125 | 100 | Plus |
3L | 28103327 | 3L | 8111647..8111792 | 117..262 | 730 | 100 | Plus |
3L | 28103327 | 3L | 8111318..8111434 | 1..117 | 585 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 8110266..8110381 | 1..116 | 100 | -> | Plus |
chr3L | 8110595..8110740 | 117..262 | 100 | -> | Plus |
chr3L | 8110793..8111590 | 263..1060 | 99 | -> | Plus |
chr3L | 8111653..8111876 | 1061..1284 | 99 | -> | Plus |
chr3L | 8111962..8112272 | 1285..1595 | 100 | -> | Plus |
chr3L | 8112328..8112800 | 1596..2068 | 100 | -> | Plus |
chr3L | 8112865..8113628 | 2069..2833 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 886..3150 | 1..2265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 886..3150 | 1..2265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 886..3150 | 1..2265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 886..3150 | 1..2265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 886..3150 | 1..2265 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 1148..3980 | 1..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 1148..3980 | 1..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 1147..3979 | 1..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 1148..3980 | 1..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
msk-RA | 1147..3979 | 1..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8118547..8118692 | 117..262 | 100 | -> | Plus |
3L | 8118218..8118333 | 1..116 | 100 | -> | Plus |
3L | 8118745..8119542 | 263..1060 | 100 | -> | Plus |
3L | 8119605..8119828 | 1061..1284 | 100 | -> | Plus |
3L | 8119912..8120222 | 1285..1595 | 100 | -> | Plus |
3L | 8120278..8120750 | 1596..2068 | 100 | -> | Plus |
3L | 8120815..8121579 | 2069..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8118547..8118692 | 117..262 | 100 | -> | Plus |
3L | 8118218..8118333 | 1..116 | 100 | -> | Plus |
3L | 8118745..8119542 | 263..1060 | 100 | -> | Plus |
3L | 8119605..8119828 | 1061..1284 | 100 | -> | Plus |
3L | 8119912..8120222 | 1285..1595 | 100 | -> | Plus |
3L | 8120278..8120750 | 1596..2068 | 100 | -> | Plus |
3L | 8120815..8121579 | 2069..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8118547..8118692 | 117..262 | 100 | -> | Plus |
3L | 8118218..8118333 | 1..116 | 100 | -> | Plus |
3L | 8118745..8119542 | 263..1060 | 100 | -> | Plus |
3L | 8119605..8119828 | 1061..1284 | 100 | -> | Plus |
3L | 8119912..8120222 | 1285..1595 | 100 | -> | Plus |
3L | 8120278..8120750 | 1596..2068 | 100 | -> | Plus |
3L | 8120815..8121579 | 2069..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 8112705..8112928 | 1061..1284 | 100 | -> | Plus |
arm_3L | 8111318..8111433 | 1..116 | 100 | -> | Plus |
arm_3L | 8111647..8111792 | 117..262 | 100 | -> | Plus |
arm_3L | 8111845..8112642 | 263..1060 | 100 | -> | Plus |
arm_3L | 8113012..8113322 | 1285..1595 | 100 | -> | Plus |
arm_3L | 8113378..8113850 | 1596..2068 | 100 | -> | Plus |
arm_3L | 8113915..8114679 | 2069..2833 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 8111845..8112642 | 263..1060 | 100 | -> | Plus |
3L | 8112705..8112928 | 1061..1284 | 100 | -> | Plus |
3L | 8113012..8113322 | 1285..1595 | 100 | -> | Plus |
3L | 8113378..8113850 | 1596..2068 | 100 | -> | Plus |
3L | 8113915..8114679 | 2069..2833 | 100 | Plus | |
3L | 8111318..8111433 | 1..116 | 100 | -> | Plus |
3L | 8111647..8111792 | 117..262 | 100 | -> | Plus |
Translation from 0 to 2264
> LD30157.hyp PTFSQGVLEVLLKILDQYRNRVYVSPRVLTDVLNYLKNAVSHAYTWKLIK PHMVAVIQDVIFPIMSFTDSDQELWESDPYEYIRLKFDIFEDYATPVPAA QSLLHSMCKKRKGILPKAMATIMQIITSPNADNKQKDGALHMIGTLADVL LKKASYRDQVESMLTTYVFPEFQNPAGHMRARACWVLHYFCDVQIKNPQV LAEIMRLTTNALLTDKELPVKVEAAIGLQMFISSQDEAPQYVEAQIKEIT KELLTIIRETENEDLTNVMQKIVCTFTEQLLPVATEICQHLATTFSQVLE SEEGSDEKAITAMSLLNTIETLLSVMEEHPDVLLNLHPIVINVVGHIFQH NITDFYEETFSLVYDLTAKAISPEMWQMLELIYQVFKKDGIDYFIDIMPA LHNYVTVDTPAFLSNPNRLLAILDMCKTMLTSSPGEDPECHAAKLMEVII LQCKGQIDSVIHMFVELALSRLTREVQSSELRTMCLQVVIAALYYNPQLL LSILDKMSQQNNDSISAHFIKQWLHDTDCFLGIHDRKLCVLGLCTLISLG EAKPQVLSEVAGKIVPALILLFDGLKRAYESRAQEEEEDEEEEDGDDCEE ALSSDEDDMDEMAPDYLDKLAEFAKTKGNESGFEVKAEIKDDDADSDGDA EESVGDLNETGLESFTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYA LLTSNLTPEQAKALQEVVVTADQRKAAKESKLIEKQGGFAFPQTAVPTSF KFGS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
msk-PA | 1049 | CG7935-PA | 296..1049 | 1..754 | 3863 | 100 | Plus |
Translation from 156 to 2264
> LD30157.pep MVAVIQDVIFPIMSFTDSDQELWESDPYEYIRLKFDIFEDYATPVPAAQS LLHSMCKKRKGILPKAMATIMQIITSPNADNKQKDGALHMIGTLADVLLK KASYRDQVESMLTTYVFPEFQNPAGHMRARACWVLHYFCDVQIKNPQVLA EIMRLTTNALLTDKELPVKVEAAIGLQMFISSQDEAPQYVEAQIKEITKE LLTIIRETENEDLTNVMQKIVCTFTEQLLPVATEICQHLATTFSQVLESE EGSDEKAITAMSLLNTIETLLSVMEEHPDVLLNLHPIVINVVGHIFQHNI TDFYEETFSLVYDLTAKAISPEMWQMLELIYQVFKKDGIDYFIDIMPALH NYVTVDTPAFLSNPNRLLAILDMCKTMLTSSPGEDPECHAAKLMEVIILQ CKGQIDSVIHMFVELALSRLTREVQSSELRTMCLQVVIAALYYNPQLLLS ILDKMSQQNNDSISAHFIKQWLHDTDCFLGIHDRKLCVLGLCTLISLGEA KPQVLSEVAGKIVPALILLFDGLKRAYESRAQEEEEDEEEEDGDDCEEAL SSDEDDMDEMAPDYLDKLAEFAKTKGNESGFEVKAEIKDDDADSDGDAEE SVGDLNETGLESFTTPIDDEENESAIDEYWTFKEVITALSAQDQAWYALL TSNLTPEQAKALQEVVVTADQRKAAKESKLIEKQGGFAFPQTAVPTSFKF GS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23958-PA | 1049 | GF23958-PA | 348..1049 | 1..702 | 3450 | 95.2 | Plus |
Dana\GF22800-PA | 220 | GF22800-PA | 1..218 | 111..371 | 972 | 75.5 | Plus |
Dana\GF21599-PA | 508 | GF21599-PA | 320..507 | 1..205 | 805 | 77.6 | Plus |
Dana\GF19002-PA | 513 | GF19002-PA | 301..498 | 89..345 | 792 | 65 | Plus |
Dana\GF11087-PA | 303 | GF11087-PA | 115..302 | 1..205 | 791 | 77.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14470-PA | 1049 | GG14470-PA | 348..1049 | 1..702 | 3710 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16170-PA | 1049 | GH16170-PA | 348..1049 | 1..702 | 3415 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
msk-PA | 1049 | CG7935-PA | 348..1049 | 1..702 | 3592 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13322-PA | 1049 | GI13322-PA | 348..1049 | 1..702 | 3426 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22608-PA | 534 | GL22608-PA | 431..533 | 434..543 | 417 | 73 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20700-PA | 1049 | GA20700-PA | 348..1049 | 1..702 | 3421 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25020-PA | 1049 | GM25020-PA | 348..1049 | 1..702 | 3732 | 99.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14053-PA | 248 | GD14053-PA | 1..248 | 455..702 | 1303 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12092-PA | 1049 | GJ12092-PA | 348..1049 | 1..702 | 3433 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19967-PA | 1051 | GK19967-PA | 350..1051 | 1..702 | 3418 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21658-PA | 1049 | GE21658-PA | 348..1049 | 1..702 | 3726 | 99.3 | Plus |